pgBadger-
Global information
- Generated on Sun Mar 17 04:10:07 2024
- Log file: /project/archive/log/postgres/dbdev51/postgresql.log-20240316
- Parsed 210,951 log entries in 6s
- Log start from 2024-03-12 03:22:08 to 2024-03-16 23:55:53
-
Overview
Global Stats
- 40 Number of unique normalized queries
- 276 Number of queries
- 1h11m53s Total query duration
- 2024-03-12 05:45:12 First query
- 2024-03-16 05:49:10 Last query
- 2 queries/s at 2024-03-14 12:35:23 Query peak
- 1h11m53s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 1h11m53s Execute total duration
- 120 Number of events
- 13 Number of unique normalized events
- 25 Max number of times the same event was reported
- 0 Number of cancellation
- 38 Total number of automatic vacuums
- 131 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 9,435 Total number of sessions
- 50 sessions at 2024-03-14 12:35:24 Session peak
- 202d16h8m43s Total duration of sessions
- 30m55s Average duration of sessions
- 0 Average queries per session
- 457ms Average queries duration per session
- 30m55s Average idle time per session
- 9,435 Total number of connections
- 12 connections/s at 2024-03-14 10:20:08 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 2 queries/s Query Peak
- 2024-03-14 12:35:23 Date
SELECT Traffic
Key values
- 2 queries/s Query Peak
- 2024-03-14 12:35:23 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2024-03-13 05:45:12 Date
Queries duration
Key values
- 1h11m53s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Mar 12 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 24 0ms 15s141ms 2s784ms 15s141ms 20s98ms 28s350ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 4 0ms 1m53s 47s868ms 0ms 44s913ms 2m26s 10 22 0ms 2m18s 47s36ms 2m5s 2m12s 3m2s 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 10 0ms 2m12s 24s174ms 13s390ms 59s355ms 2m12s 13 7 0ms 2m8s 30s457ms 9s277ms 54s460ms 2m8s 14 10 0ms 2m8s 21s528ms 9s909ms 19s498ms 2m8s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Mar 13 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 22 0ms 15s180ms 2s911ms 15s180ms 18s57ms 27s537ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 6 0ms 4s800ms 3s172ms 1s736ms 7s774ms 9s523ms 10 10 0ms 5s218ms 3s561ms 8s768ms 9s492ms 9s554ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 8 0ms 2m9s 51s458ms 56s282ms 2m2s 2m9s 13 9 0ms 2m17s 32s358ms 23s18ms 55s290ms 2m17s 14 1 0ms 20s12ms 20s12ms 0ms 0ms 20s12ms 15 3 0ms 3s289ms 1s872ms 0ms 1s114ms 3s289ms 16 4 0ms 2m36s 1m3s 0ms 28s238ms 2m36s 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Mar 14 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 22 0ms 15s145ms 2s877ms 15s145ms 17s877ms 26s888ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 18 0ms 2m52s 17s861ms 12s500ms 1m6s 2m52s 11 5 0ms 5s347ms 3s815ms 0ms 9s102ms 9s976ms 12 18 0ms 3m43s 31s66ms 12s595ms 3m51s 4m13s 13 11 0ms 11s999ms 5s161ms 8s896ms 11s999ms 18s449ms 14 16 0ms 25s871ms 6s414ms 10s45ms 21s505ms 25s871ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Mar 15 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 23 0ms 15s212ms 2s777ms 15s212ms 17s480ms 26s863ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Mar 16 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 23 0ms 15s229ms 2s805ms 4s342ms 18s132ms 26s820ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Mar 12 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 23 0 2s764ms 0ms 15s141ms 28s350ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 4 0 47s868ms 0ms 0ms 2m26s 10 22 0 47s36ms 32s873ms 2m5s 3m2s 11 0 0 0ms 0ms 0ms 0ms 12 10 0 24s174ms 0ms 13s390ms 2m12s 13 7 0 30s457ms 0ms 9s277ms 2m8s 14 10 0 21s528ms 0ms 9s909ms 2m8s 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Mar 13 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 21 0 2s894ms 0ms 15s180ms 27s537ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 6 0 3s172ms 0ms 1s736ms 9s523ms 10 10 0 3s561ms 0ms 8s768ms 9s554ms 11 0 0 0ms 0ms 0ms 0ms 12 8 0 51s458ms 0ms 56s282ms 2m9s 13 9 0 32s358ms 1s904ms 23s18ms 2m17s 14 1 0 20s12ms 0ms 0ms 0ms 15 3 0 1s872ms 0ms 0ms 3s289ms 16 4 0 1m3s 0ms 0ms 1m7s 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Mar 14 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 21 0 2s852ms 0ms 15s145ms 26s888ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 18 0 17s861ms 9s860ms 12s500ms 2m52s 11 5 0 3s815ms 0ms 0ms 9s976ms 12 18 0 31s66ms 8s570ms 12s595ms 4m13s 13 11 0 5s161ms 0ms 8s896ms 18s449ms 14 16 0 6s414ms 8s557ms 10s45ms 25s871ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Mar 15 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 21 0 2s835ms 0ms 15s212ms 26s863ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Mar 16 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 21 0 2s865ms 0ms 0ms 26s820ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Mar 12 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Mar 13 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Mar 14 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Mar 15 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Mar 16 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Mar 12 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 24 24.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 4 4.00 0.00% 10 0 22 22.00 0.00% 11 0 0 0.00 0.00% 12 0 9 9.00 0.00% 13 0 7 7.00 0.00% 14 0 10 10.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Mar 13 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 22 22.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 5 5.00 0.00% 10 0 10 10.00 0.00% 11 0 0 0.00 0.00% 12 0 8 8.00 0.00% 13 0 4 4.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 4 4.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Mar 14 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 22 22.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 18 18.00 0.00% 11 0 5 5.00 0.00% 12 0 17 17.00 0.00% 13 0 8 8.00 0.00% 14 0 13 13.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Mar 15 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 23 23.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Mar 16 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 23 23.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second Mar 12 03 53 0.01/s 04 80 0.02/s 05 86 0.02/s 06 76 0.02/s 07 79 0.02/s 08 74 0.02/s 09 79 0.02/s 10 87 0.02/s 11 80 0.02/s 12 107 0.03/s 13 86 0.02/s 14 92 0.03/s 15 79 0.02/s 16 77 0.02/s 17 77 0.02/s 18 79 0.02/s 19 80 0.02/s 20 80 0.02/s 21 80 0.02/s 22 78 0.02/s 23 70 0.02/s Mar 13 00 76 0.02/s 01 80 0.02/s 02 79 0.02/s 03 80 0.02/s 04 80 0.02/s 05 86 0.02/s 06 79 0.02/s 07 78 0.02/s 08 75 0.02/s 09 92 0.03/s 10 111 0.03/s 11 80 0.02/s 12 81 0.02/s 13 82 0.02/s 14 79 0.02/s 15 82 0.02/s 16 76 0.02/s 17 77 0.02/s 18 79 0.02/s 19 79 0.02/s 20 79 0.02/s 21 73 0.02/s 22 70 0.02/s 23 76 0.02/s Mar 14 00 80 0.02/s 01 80 0.02/s 02 80 0.02/s 03 80 0.02/s 04 80 0.02/s 05 86 0.02/s 06 78 0.02/s 07 75 0.02/s 08 82 0.02/s 09 80 0.02/s 10 123 0.03/s 11 88 0.02/s 12 135 0.04/s 13 96 0.03/s 14 117 0.03/s 15 78 0.02/s 16 77 0.02/s 17 77 0.02/s 18 79 0.02/s 19 78 0.02/s 20 80 0.02/s 21 66 0.02/s 22 80 0.02/s 23 80 0.02/s Mar 15 00 80 0.02/s 01 80 0.02/s 02 80 0.02/s 03 80 0.02/s 04 80 0.02/s 05 85 0.02/s 06 75 0.02/s 07 78 0.02/s 08 79 0.02/s 09 76 0.02/s 10 80 0.02/s 11 80 0.02/s 12 79 0.02/s 13 80 0.02/s 14 78 0.02/s 15 80 0.02/s 16 77 0.02/s 17 77 0.02/s 18 77 0.02/s 19 80 0.02/s 20 66 0.02/s 21 80 0.02/s 22 79 0.02/s 23 80 0.02/s Mar 16 00 80 0.02/s 01 80 0.02/s 02 80 0.02/s 03 80 0.02/s 04 79 0.02/s 05 81 0.02/s 06 80 0.02/s 07 78 0.02/s 08 77 0.02/s 09 78 0.02/s 10 79 0.02/s 11 80 0.02/s 12 80 0.02/s 13 79 0.02/s 14 79 0.02/s 15 80 0.02/s 16 77 0.02/s 17 75 0.02/s 18 79 0.02/s 19 66 0.02/s 20 80 0.02/s 21 79 0.02/s 22 80 0.02/s 23 80 0.02/s Day Hour Count Average Duration Average idle time Mar 12 03 53 30m41s 30m41s 04 80 30m38s 30m38s 05 86 28m25s 28m24s 06 76 30m38s 30m38s 07 79 30m39s 30m39s 08 74 30m41s 30m41s 09 76 30m18s 30m16s 10 85 29m16s 29m3s 11 81 30m40s 30m40s 12 103 24m22s 24m19s 13 86 28m5s 28m3s 14 90 25m59s 25m57s 15 80 31m40s 31m40s 16 77 30m39s 30m39s 17 77 30m40s 30m40s 18 82 44m43s 44m43s 19 85 54m46s 54m46s 20 81 35m34s 35m34s 21 80 30m40s 30m40s 22 78 30m38s 30m38s 23 70 30m40s 30m40s Mar 13 00 76 30m39s 30m39s 01 80 30m40s 30m40s 02 79 30m40s 30m40s 03 80 30m39s 30m39s 04 80 30m40s 30m40s 05 86 28m24s 28m24s 06 79 30m37s 30m37s 07 78 30m40s 30m40s 08 75 30m40s 30m40s 09 91 27m15s 27m15s 10 108 21m34s 21m34s 11 80 31m4s 31m4s 12 81 29m59s 29m53s 13 80 30m40s 30m36s 14 79 30m40s 30m40s 15 82 31m4s 31m4s 16 76 30m40s 30m37s 17 78 31m33s 31m33s 18 79 30m39s 30m39s 19 79 30m39s 30m39s 20 83 56m23s 56m23s 21 74 38m34s 38m34s 22 70 30m40s 30m40s 23 76 30m39s 30m39s Mar 14 00 80 30m40s 30m40s 01 80 30m40s 30m40s 02 80 30m39s 30m39s 03 80 30m40s 30m40s 04 80 30m40s 30m40s 05 86 28m23s 28m23s 06 78 30m38s 30m38s 07 75 30m41s 30m41s 08 80 30m39s 30m39s 09 80 30m39s 30m39s 10 122 20m40s 20m37s 11 88 26m16s 26m16s 12 131 19m50s 19m45s 13 95 23m39s 23m38s 14 118 23m9s 23m8s 15 78 30m44s 30m44s 16 77 30m57s 30m57s 17 77 30m38s 30m38s 18 81 36m13s 36m13s 19 83 59m20s 59m20s 20 80 30m39s 30m39s 21 66 30m40s 30m40s 22 80 30m39s 30m39s 23 80 30m40s 30m40s Mar 15 00 80 30m40s 30m40s 01 80 30m39s 30m39s 02 80 30m40s 30m40s 03 80 30m40s 30m40s 04 80 30m39s 30m39s 05 85 28m23s 28m22s 06 75 30m39s 30m39s 07 78 30m38s 30m38s 08 79 30m40s 30m40s 09 76 30m40s 30m40s 10 78 30m50s 30m50s 11 80 30m57s 30m57s 12 79 30m42s 30m42s 13 80 30m39s 30m39s 14 78 30m40s 30m40s 15 80 30m40s 30m40s 16 77 30m39s 30m39s 17 77 30m39s 30m39s 18 77 30m40s 30m40s 19 80 30m40s 30m40s 20 66 30m40s 30m40s 21 80 30m39s 30m39s 22 81 48m3s 48m3s 23 80 30m40s 30m40s Mar 16 00 80 30m39s 30m39s 01 80 30m40s 30m40s 02 80 30m40s 30m40s 03 80 30m39s 30m39s 04 79 30m40s 30m40s 05 81 28m17s 28m16s 06 80 30m36s 30m36s 07 78 30m40s 30m40s 08 77 30m41s 30m41s 09 78 30m38s 30m38s 10 79 30m40s 30m40s 11 80 30m40s 30m40s 12 80 30m39s 30m39s 13 79 30m40s 30m40s 14 79 30m39s 30m39s 15 80 30m39s 30m39s 16 77 30m40s 30m40s 17 75 30m39s 30m39s 18 79 30m40s 30m40s 19 66 30m40s 30m40s 20 80 30m38s 30m38s 21 79 30m41s 30m41s 22 80 30m40s 30m40s 23 80 30m38s 30m38s -
Connections
Established Connections
Key values
- 12 connections Connection Peak
- 2024-03-14 10:20:08 Date
Connections per database
Key values
- ctddev51 Main Database
- 9,435 connections Total
Connections per user
Key values
- editeu Main User
- 9,435 connections Total
-
Sessions
Simultaneous sessions
Key values
- 50 sessions Session Peak
- 2024-03-14 12:35:24 Date
Histogram of session times
Key values
- 9,029 1800000-3600000ms duration
Sessions per database
Key values
- ctddev51 Main Database
- 9,435 sessions Total
Sessions per user
Key values
- editeu Main User
- 9,435 sessions Total
Sessions per host
Key values
- 10.12.5.56 Main Host
- 9,435 sessions Total
Host Count Total Duration Average Duration 10.12.5.40 4 2s245ms 561ms 10.12.5.47 1,824 38d20h17m33s 30m40s 10.12.5.53 1,854 38d19h18m19s 30m8s 10.12.5.54 1,824 38d20h17m33s 30m40s 10.12.5.55 1,827 38d22h31m24s 30m41s 10.12.5.56 2,044 38d22h33m12s 27m25s 192.168.201.10 7 13h39m2s 1h57m 192.168.201.14 2 1d28m56s 12h14m28s 192.168.201.6 20 2d11h16m56s 2h57m50s 192.168.202.5 13 5h27m28s 25m11s 192.168.202.6 16 4d18m13s 6h1m8s Sessions per application
Key values
- unknown Main Application
- 9,435 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 1,253 buffers Checkpoint Peak
- 2024-03-13 15:07:29 Date
- 124.817 seconds Highest write time
- 0.003 seconds Sync time
Checkpoints Wal files
Key values
- 1 files Wal files usage Peak
- 2024-03-12 11:05:43 Date
Checkpoints distance
Key values
- 17.82 Mo Distance Peak
- 2024-03-13 15:07:29 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Mar 12 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 75 7.607s 0.001s 7.622s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 31 3.291s 0.002s 3.321s 11 348 34.703s 0.004s 34.785s 12 0 0s 0s 0s 13 754 75.432s 0.003s 75.463s 14 898 89.883s 0.003s 89.899s 15 901 89.171s 0.003s 89.25s 16 373 37.088s 0.001s 37.103s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s Mar 13 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 70 7.12s 0.001s 7.137s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 26 2.792s 0.002s 2.822s 11 6 0.688s 0.001s 0.703s 12 0 0s 0s 0s 13 17 1.713s 0.001s 1.729s 14 1,347 134.344s 0.003s 134.424s 15 2,090 208.254s 0.004s 208.334s 16 653 64.832s 0.005s 64.865s 17 1,327 131.835s 0.004s 131.912s 18 28 2.704s 0.001s 2.719s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s Mar 14 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 67 6.856s 0.001s 6.872s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 6 0.757s 0.001s 0.773s 13 17 1.874s 0.002s 1.903s 14 0 0s 0s 0s 15 9 1.07s 0.002s 1.099s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s Mar 15 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 67 6.876s 0.001s 6.893s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 5 0.611s 0.001s 0.625s 11 0 0s 0s 0s 12 6 0.691s 0.001s 0.708s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s Mar 16 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 73 7.415s 0.001s 7.431s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s Day Hour Added Removed Recycled Synced files Longest sync Average sync Mar 12 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 8 0.001s 0.001s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 19 0.001s 0.002s 11 0 0 1 51 0.001s 0.002s 12 0 0 0 0 0s 0s 13 0 0 0 72 0.001s 0.002s 14 0 0 0 27 0.001s 0.001s 15 0 0 1 51 0.001s 0.002s 16 0 0 0 21 0.001s 0.001s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s Mar 13 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 8 0.001s 0.001s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 15 0.001s 0.002s 11 0 0 0 5 0.001s 0.001s 12 0 0 0 0 0s 0s 13 0 0 0 9 0.001s 0.001s 14 0 0 1 48 0.001s 0.002s 15 0 0 1 46 0.001s 0.002s 16 0 0 0 47 0.001s 0.002s 17 0 0 1 43 0.001s 0.002s 18 0 0 0 9 0.001s 0.001s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s Mar 14 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 8 0.001s 0.001s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 5 0.001s 0.001s 13 0 0 0 11 0.001s 0.002s 14 0 0 0 0 0s 0s 15 0 0 0 9 0.001s 0.002s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s Mar 15 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 7 0.001s 0.001s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 5 0.001s 0.001s 11 0 0 0 0 0s 0s 12 0 0 0 4 0.001s 0.001s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s Mar 16 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 7 0.001s 0.001s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s Day Hour Count Avg time (sec) Mar 12 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Mar 13 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Mar 14 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Mar 15 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Mar 16 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Mar 12 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 463.00 kB 25,862.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 45.50 kB 22,118.50 kB 11 1,504.00 kB 18,170.00 kB 12 0.00 kB 0.00 kB 13 3,311.00 kB 15,246.00 kB 14 2,313.00 kB 13,372.00 kB 15 4,397.00 kB 12,072.50 kB 16 3,288.00 kB 10,829.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB Mar 13 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 450.00 kB 9,791.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 26.50 kB 8,375.50 kB 11 14.00 kB 7,143.00 kB 12 0.00 kB 0.00 kB 13 109.00 kB 6,440.00 kB 14 5,707.50 kB 7,523.50 kB 15 8,470.00 kB 9,059.50 kB 16 3,114.50 kB 8,033.50 kB 17 4,976.00 kB 7,479.50 kB 18 272.00 kB 6,637.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB Mar 14 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 434.00 kB 6,017.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 6.00 kB 5,416.00 kB 13 30.00 kB 4,635.50 kB 14 0.00 kB 0.00 kB 15 10.00 kB 3,757.50 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB Mar 15 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 445.00 kB 3,248.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 6.00 kB 2,924.00 kB 11 0.00 kB 0.00 kB 12 21.00 kB 2,634.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB Mar 16 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 466.00 kB 2,417.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Mar 12 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Mar 13 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Mar 14 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Mar 15 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Mar 16 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0.23 sec Highest CPU-cost vacuum
Table edit.tm_reference_term
Database ctddev51 - 2024-03-13 14:10:07 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctddev51 - Date
Average Autovacuum Duration
Key values
- 0.23 sec Highest CPU-cost vacuum
Table edit.tm_reference_term
Database ctddev51 - 2024-03-13 14:10:07 Date
Analyzes per table
Key values
- edit.tm_reference_term (91) Main table analyzed (database ctddev51)
- 131 analyzes Total
Vacuums per table
Key values
- edit.tm_reference_term (29) Main table vacuumed on database ctddev51
- 38 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctddev51.edit.tm_reference_term 29 11 15,837 0 992 0 98 3,863 384 1,725,913 ctddev51.edit.tm_reference 5 5 1,812 0 286 0 0 1,023 142 345,531 ctddev51.pg_toast.pg_toast_2619 3 3 7,261 0 1,648 0 2,531 5,274 1,621 928,852 ctddev51.pub2.reference_exp2 1 0 258 0 4 0 0 124 2 23,683 Total 38 19 25,168 93 2,930 0 2,629 10,284 2,149 3,023,979 Tuples removed per table
Key values
- edit.tm_reference_term (18514) Main table with removed tuples on database ctddev51
- 25786 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctddev51.edit.tm_reference_term 29 11 18,514 471,404 0 20 6,973 ctddev51.pg_toast.pg_toast_2619 3 3 6,519 26,602 0 0 9,789 ctddev51.edit.tm_reference 5 5 753 2,990 0 0 852 ctddev51.pub2.reference_exp2 1 0 0 3,381 0 0 123 Total 38 19 25,786 504,377 0 20 17,737 Pages removed per table
Key values
- edit.tm_reference_term (20) Main table with removed pages on database ctddev51
- 20 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Mar 12 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 6 11 0 8 12 0 6 13 0 15 14 0 14 15 0 12 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 Mar 13 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 20 15 0 12 16 0 30 17 0 8 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 Mar 14 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 Mar 15 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 Mar 16 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 - 0.23 sec Highest CPU-cost vacuum
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Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
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Queries
Queries by type
Key values
- 269 Total read queries
- 7 Total write queries
Queries by database
Key values
- unknown Main database
- 147 Requests
- 46m23s (ctddev51)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 330 Requests
User Request type Count Duration edit Total 4 55s216ms select 4 55s216ms editeu Total 172 26m45s select 172 26m45s load Total 28 1h2m29s select 28 1h2m29s pub2 Total 4 31s778ms select 4 31s778ms pubeu Total 60 2m36s cte 12 39s762ms select 48 1m56s unknown Total 330 52m38s cte 6 6s88ms select 324 52m32s Duration by user
Key values
- 1h2m29s (load) Main time consuming user
User Request type Count Duration edit Total 4 55s216ms select 4 55s216ms editeu Total 172 26m45s select 172 26m45s load Total 28 1h2m29s select 28 1h2m29s pub2 Total 4 31s778ms select 4 31s778ms pubeu Total 60 2m36s cte 12 39s762ms select 48 1m56s unknown Total 330 52m38s cte 6 6s88ms select 324 52m32s Queries by host
Key values
- unknown Main host
- 598 Requests
- 2h25m55s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 272 Requests
- 1h11m10s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-03-13 16:59:48 Date
Number of cancelled queries (5 minutes period)
NO DATASET
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Top Queries
Histogram of query times
Key values
- 214 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 3m43s select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 3 and t.id = l.TERM_ID;[ Date: 2024-03-14 12:41:07 - Database: ctddev51 - User: editeu - Bind query: yes ]
2 2m52s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-14 10:09:22 - Database: ctddev51 - User: load - Bind query: yes ]
3 2m36s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-13 16:00:41 - Database: ctddev51 - User: load - Bind query: yes ]
4 2m18s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 10:54:07 - Database: ctddev51 - User: load - Bind query: yes ]
5 2m17s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-13 13:56:51 - Database: ctddev51 - User: load - Bind query: yes ]
6 2m13s select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 5 and t.id = l.TERM_ID;[ Date: 2024-03-14 12:37:37 - Database: ctddev51 - User: editeu - Bind query: yes ]
7 2m12s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 10:19:39 - Database: ctddev51 - User: load - Bind query: yes ]
8 2m12s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 12:36:47 - Database: ctddev51 - User: load - Bind query: yes ]
9 2m10s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 10:47:15 - Database: ctddev51 - User: load - Bind query: yes ]
10 2m9s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-13 12:21:23 - Database: ctddev51 - User: load - Bind query: yes ]
11 2m8s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 14:23:53 - Database: ctddev51 - User: load - Bind query: yes ]
12 2m8s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 13:13:51 - Database: ctddev51 - User: load - Bind query: yes ]
13 2m6s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 10:40:04 - Database: ctddev51 - User: load - Bind query: yes ]
14 2m5s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 10:06:12 - Database: ctddev51 - User: load - Bind query: yes ]
15 2m2s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-13 12:39:37 - Database: ctddev51 - User: load - Bind query: yes ]
16 1m59s select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 2 and t.id = l.TERM_ID;[ Date: 2024-03-14 12:37:23 - Database: ctddev51 - User: editeu - Bind query: yes ]
17 1m53s select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;[ Date: 2024-03-12 09:54:02 - Database: ctddev51 - User: load - Bind query: yes ]
18 57s773ms select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;[ Date: 2024-03-13 16:01:45 - Bind query: yes ]
19 54s758ms select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;[ Date: 2024-03-14 10:10:23 - Bind query: yes ]
20 50s893ms select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;[ Date: 2024-03-12 12:37:43 - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 31m14s 14 1m53s 2m52s 2m13s select distinct primarygeneterm.acc_txt, taxonterm.acc_txt, gt.gene_acc_txt from pub1.gene_taxon gt, pub1.term primarygeneterm, pub1.term taxonterm where gt.gene_id = primarygeneterm.id and gt.taxon_id = taxonterm.id;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Mar 12 09 1 1m53s 1m53s 10 5 10m53s 2m10s 12 1 2m12s 2m12s 13 1 2m8s 2m8s 14 1 2m8s 2m8s Mar 13 12 2 4m12s 2m6s 13 1 2m17s 2m17s 16 1 2m36s 2m36s Mar 14 10 1 2m52s 2m52s [ User: load - Total duration: 31m14s - Times executed: 14 ]
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-14 10:09:22 Duration: 2m52s Database: ctddev51 User: load Bind query: yes
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-13 16:00:41 Duration: 2m36s Database: ctddev51 User: load Bind query: yes
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-12 10:54:07 Duration: 2m18s Database: ctddev51 User: load Bind query: yes
2 18m37s 44 1s73ms 57s773ms 25s386ms select id, object_type_id, acc_txt, t.acc_db_cd, nm, nm_sort, secondary_nm, description, note from pub1.term t where object_type_id = ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Mar 12 09 3 1m17s 25s825ms 10 17 6m21s 22s417ms 12 3 1m22s 27s361ms 13 3 1m15s 25s145ms 14 3 1m6s 22s86ms Mar 13 12 6 2m39s 26s610ms 13 3 1m25s 28s415ms 16 3 1m36s 32s65ms Mar 14 10 3 1m33s 31s183ms -
select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-13 16:01:45 Duration: 57s773ms Bind query: yes
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select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-14 10:10:23 Duration: 54s758ms Bind query: yes
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select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-12 12:37:43 Duration: 50s893ms Bind query: yes
3 13m22s 86 1s33ms 3m43s 9s331ms select t.id, t.object_type_id, t.acc_txt, t.acc_db_cd, t.nm, t.nm_sort, t.secondary_nm, t.description, t.note, l.nm from pub1.term t, pub1.term_label l where t.object_type_id = ? and t.id = l.term_id;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Mar 12 12 5 24s189ms 4s837ms 13 3 9s277ms 3s92ms 14 6 20s492ms 3s415ms Mar 13 09 5 17s297ms 3s459ms 10 10 35s618ms 3s561ms Mar 14 10 14 55s573ms 3s969ms 11 5 19s79ms 3s815ms 12 17 9m6s 32s153ms 13 8 28s477ms 3s559ms 14 13 45s912ms 3s531ms [ User: editeu - Total duration: 13m22s - Times executed: 86 ]
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 3 and t.id = l.TERM_ID;
Date: 2024-03-14 12:41:07 Duration: 3m43s Database: ctddev51 User: editeu Bind query: yes
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 5 and t.id = l.TERM_ID;
Date: 2024-03-14 12:37:37 Duration: 2m13s Database: ctddev51 User: editeu Bind query: yes
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 2 and t.id = l.TERM_ID;
Date: 2024-03-14 12:37:23 Duration: 1m59s Database: ctddev51 User: editeu Bind query: yes
4 1m15s 5 15s141ms 15s229ms 15s181ms select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and chemterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and viageneptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and geneterm.id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and phenotypeterm.id = any (array ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?)))) and diseaseterm.id = any (array ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Mar 12 05 1 15s141ms 15s141ms Mar 13 05 1 15s180ms 15s180ms Mar 14 05 1 15s145ms 15s145ms Mar 15 05 1 15s212ms 15s212ms Mar 16 05 1 15s229ms 15s229ms -
select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-16 05:49:10 Duration: 15s229ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-15 05:49:10 Duration: 15s212ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-13 05:49:11 Duration: 15s180ms Bind query: yes
5 39s249ms 20 1s765ms 2s238ms 1s962ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Mar 12 05 4 8s465ms 2s116ms Mar 13 05 4 8s446ms 2s111ms Mar 14 05 4 7s277ms 1s819ms Mar 15 05 4 7s192ms 1s798ms Mar 16 05 4 7s867ms 1s966ms -
SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1275443')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-12 05:47:59 Duration: 2s238ms Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2036477')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-13 05:48:05 Duration: 2s227ms Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2036477')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-13 05:48:02 Duration: 2s221ms Bind query: yes
6 29s667ms 5 5s773ms 6s42ms 5s933ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Mar 12 05 1 5s773ms 5s773ms Mar 13 05 1 6s1ms 6s1ms Mar 14 05 1 5s941ms 5s941ms Mar 15 05 1 6s42ms 6s42ms Mar 16 05 1 5s908ms 5s908ms [ User: pubeu - Total duration: 11s951ms - Times executed: 2 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-15 05:48:46 Duration: 6s42ms Database: ctddev51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-13 05:48:46 Duration: 6s1ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-14 05:48:46 Duration: 5s941ms Bind query: yes
7 28s942ms 5 5s665ms 5s974ms 5s788ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Mar 12 05 1 5s754ms 5s754ms Mar 13 05 1 5s871ms 5s871ms Mar 14 05 1 5s665ms 5s665ms Mar 15 05 1 5s974ms 5s974ms Mar 16 05 1 5s676ms 5s676ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-15 05:48:52 Duration: 5s974ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-13 05:48:52 Duration: 5s871ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-12 05:48:57 Duration: 5s754ms Bind query: yes
8 25s871ms 1 25s871ms 25s871ms 25s871ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and emt.object_type_id = t.object_type_id left outer join pub2.medium m on m.id = ee.medium_id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id where e.reference_acc_txt not in (...);Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Mar 14 14 1 25s871ms 25s871ms [ User: edit - Total duration: 25s871ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:8122306 - Total duration: 25s871ms - Times executed: 1 ]
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SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND emt.object_type_id = t.object_type_id LEFT OUTER JOIN PUB2.MEDIUM m ON m.id = ee.medium_id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id WHERE e.reference_acc_txt NOT IN ('37741207', '37611859', '37134253', '38385684', '37560165', '37545493', '37141245', '37162236', '37167483', '37224071', '36657687', '37120575');
Date: 2024-03-14 14:33:47 Duration: 25s871ms Database: ctddev51 User: edit Application: pgAdmin 4 - CONN:8122306
9 23s18ms 1 23s18ms 23s18ms 23s18ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt inner join edit.exposure e on e.exp_event_id = ee.id where e.reference_acc_txt not in (...);Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Mar 13 13 1 23s18ms 23s18ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893');
Date: 2024-03-13 13:14:01 Duration: 23s18ms
10 21s505ms 1 21s505ms 21s505ms 21s505ms select distinct ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and emt.object_type_id = t.object_type_id left outer join pub2.medium m on m.id = ee.medium_id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id where e.reference_acc_txt not in (...);Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Mar 14 14 1 21s505ms 21s505ms -
SELECT distinct ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND emt.object_type_id = t.object_type_id LEFT OUTER JOIN PUB2.MEDIUM m ON m.id = ee.medium_id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id WHERE e.reference_acc_txt NOT IN ('37741207', '37611859', '37134253', '38385684', '37560165', '37545493', '37141245', '37162236', '37167483', '37224071', '36657687', '37120575');
Date: 2024-03-14 14:34:46 Duration: 21s505ms
11 20s918ms 1 20s918ms 20s918ms 20s918ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt inner join edit.exposure e on e.exp_event_id = ee.id;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Mar 13 13 1 20s918ms 20s918ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id;
Date: 2024-03-13 13:09:46 Duration: 20s918ms
12 20s774ms 1 20s774ms 20s774ms 20s774ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt inner join edit.exposure e on e.exp_event_id = ee.id where e.reference_acc_txt not in (...) order by ee.id;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Mar 13 13 1 20s774ms 20s774ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') order by ee.id;
Date: 2024-03-13 13:15:14 Duration: 20s774ms
13 20s12ms 1 20s12ms 20s12ms 20s12ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id where e.reference_acc_txt not in (...) and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id where e.reference_acc_txt not in (...) and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id where e.reference_acc_txt not in (...); , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id where e.reference_acc_txt not in (...) and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id --and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Mar 13 14 1 20s12ms 20s12ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id -- ,ee.medium_nm -- get from pub medium table -- ,m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id -- ,ee.medium_term_acc_txt -- get from pub medium table , -- ,m.term_acc_txt ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query -- LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') -- and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '';
Date: 2024-03-13 14:00:18 Duration: 20s12ms
14 18s586ms 7 1s10ms 3s386ms 2s655ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Mar 12 05 1 3s235ms 3s235ms Mar 13 05 1 3s286ms 3s286ms Mar 14 05 1 3s386ms 3s386ms Mar 15 05 2 4s335ms 2s167ms Mar 16 05 2 4s342ms 2s171ms [ User: pubeu - Total duration: 16s556ms - Times executed: 5 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-14 05:45:12 Duration: 3s386ms Database: ctddev51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-15 05:45:12 Duration: 3s324ms Database: ctddev51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-16 05:45:12 Duration: 3s323ms Database: ctddev51 User: pubeu Bind query: yes
15 17s559ms 5 3s452ms 3s591ms 3s511ms select gcr.ixn_id, null, null, null from gene_chem_reference gcr where gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?));Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Mar 12 05 1 3s591ms 3s591ms Mar 13 05 1 3s452ms 3s452ms Mar 14 05 1 3s501ms 3s501ms Mar 15 05 1 3s499ms 3s499ms Mar 16 05 1 3s514ms 3s514ms [ User: pubeu - Total duration: 17s559ms - Times executed: 5 ]
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-12 05:47:19 Duration: 3s591ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-16 05:47:19 Duration: 3s514ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-14 05:47:18 Duration: 3s501ms Database: ctddev51 User: pubeu Bind query: yes
16 17s22ms 5 3s347ms 3s462ms 3s404ms select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Mar 12 05 1 3s462ms 3s462ms Mar 13 05 1 3s393ms 3s393ms Mar 14 05 1 3s460ms 3s460ms Mar 15 05 1 3s347ms 3s347ms Mar 16 05 1 3s358ms 3s358ms -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-12 05:47:23 Duration: 3s462ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-14 05:47:22 Duration: 3s460ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-13 05:47:22 Duration: 3s393ms Bind query: yes
17 15s544ms 5 3s31ms 3s162ms 3s108ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select tp.term_id from term_pathway tp where upper(tp.pathway_nm) like ? and tp.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by g.nm_sort, c.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Mar 12 05 1 3s79ms 3s79ms Mar 13 05 1 3s127ms 3s127ms Mar 14 05 1 3s143ms 3s143ms Mar 15 05 1 3s31ms 3s31ms Mar 16 05 1 3s162ms 3s162ms -
SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-16 05:47:30 Duration: 3s162ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-14 05:47:30 Duration: 3s143ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-13 05:47:29 Duration: 3s127ms Bind query: yes
18 14s795ms 10 1s98ms 1s854ms 1s479ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by fg.nm_sort, tg.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Mar 12 05 2 3s69ms 1s534ms Mar 13 05 2 2s742ms 1s371ms Mar 14 05 2 3s312ms 1s656ms Mar 15 05 2 2s785ms 1s392ms Mar 16 05 2 2s885ms 1s442ms [ User: pubeu - Total duration: 6s55ms - Times executed: 4 ]
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-03-14 05:48:09 Duration: 1s854ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-03-13 05:48:10 Duration: 1s643ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-03-12 05:48:13 Duration: 1s565ms Database: ctddev51 User: pubeu Bind query: yes
19 13s329ms 5 2s615ms 2s715ms 2s665ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Mar 12 05 1 2s615ms 2s615ms Mar 13 05 1 2s644ms 2s644ms Mar 14 05 1 2s684ms 2s684ms Mar 15 05 1 2s670ms 2s670ms Mar 16 05 1 2s715ms 2s715ms -
SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-16 05:48:26 Duration: 2s715ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-14 05:48:27 Duration: 2s684ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-15 05:48:26 Duration: 2s670ms Bind query: yes
20 12s595ms 1 12s595ms 12s595ms 12s595ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id --and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Mar 14 12 1 12s595ms 12s595ms [ User: pub2 - Total duration: 12s595ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:9711838 - Total duration: 12s595ms - Times executed: 1 ]
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SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '';
Date: 2024-03-14 12:56:09 Duration: 12s595ms Database: ctddev51 User: pub2 Application: pgAdmin 4 - CONN:9711838
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 86 13m22s 1s33ms 3m43s 9s331ms select t.id, t.object_type_id, t.acc_txt, t.acc_db_cd, t.nm, t.nm_sort, t.secondary_nm, t.description, t.note, l.nm from pub1.term t, pub1.term_label l where t.object_type_id = ? and t.id = l.term_id;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Mar 12 12 5 24s189ms 4s837ms 13 3 9s277ms 3s92ms 14 6 20s492ms 3s415ms Mar 13 09 5 17s297ms 3s459ms 10 10 35s618ms 3s561ms Mar 14 10 14 55s573ms 3s969ms 11 5 19s79ms 3s815ms 12 17 9m6s 32s153ms 13 8 28s477ms 3s559ms 14 13 45s912ms 3s531ms [ User: editeu - Total duration: 13m22s - Times executed: 86 ]
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 3 and t.id = l.TERM_ID;
Date: 2024-03-14 12:41:07 Duration: 3m43s Database: ctddev51 User: editeu Bind query: yes
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 5 and t.id = l.TERM_ID;
Date: 2024-03-14 12:37:37 Duration: 2m13s Database: ctddev51 User: editeu Bind query: yes
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 2 and t.id = l.TERM_ID;
Date: 2024-03-14 12:37:23 Duration: 1m59s Database: ctddev51 User: editeu Bind query: yes
2 44 18m37s 1s73ms 57s773ms 25s386ms select id, object_type_id, acc_txt, t.acc_db_cd, nm, nm_sort, secondary_nm, description, note from pub1.term t where object_type_id = ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Mar 12 09 3 1m17s 25s825ms 10 17 6m21s 22s417ms 12 3 1m22s 27s361ms 13 3 1m15s 25s145ms 14 3 1m6s 22s86ms Mar 13 12 6 2m39s 26s610ms 13 3 1m25s 28s415ms 16 3 1m36s 32s65ms Mar 14 10 3 1m33s 31s183ms -
select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-13 16:01:45 Duration: 57s773ms Bind query: yes
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select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-14 10:10:23 Duration: 54s758ms Bind query: yes
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select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-12 12:37:43 Duration: 50s893ms Bind query: yes
3 20 39s249ms 1s765ms 2s238ms 1s962ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Mar 12 05 4 8s465ms 2s116ms Mar 13 05 4 8s446ms 2s111ms Mar 14 05 4 7s277ms 1s819ms Mar 15 05 4 7s192ms 1s798ms Mar 16 05 4 7s867ms 1s966ms -
SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1275443')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-12 05:47:59 Duration: 2s238ms Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2036477')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-13 05:48:05 Duration: 2s227ms Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2036477')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-13 05:48:02 Duration: 2s221ms Bind query: yes
4 14 31m14s 1m53s 2m52s 2m13s select distinct primarygeneterm.acc_txt, taxonterm.acc_txt, gt.gene_acc_txt from pub1.gene_taxon gt, pub1.term primarygeneterm, pub1.term taxonterm where gt.gene_id = primarygeneterm.id and gt.taxon_id = taxonterm.id;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Mar 12 09 1 1m53s 1m53s 10 5 10m53s 2m10s 12 1 2m12s 2m12s 13 1 2m8s 2m8s 14 1 2m8s 2m8s Mar 13 12 2 4m12s 2m6s 13 1 2m17s 2m17s 16 1 2m36s 2m36s Mar 14 10 1 2m52s 2m52s [ User: load - Total duration: 31m14s - Times executed: 14 ]
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-14 10:09:22 Duration: 2m52s Database: ctddev51 User: load Bind query: yes
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-13 16:00:41 Duration: 2m36s Database: ctddev51 User: load Bind query: yes
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-12 10:54:07 Duration: 2m18s Database: ctddev51 User: load Bind query: yes
5 10 14s795ms 1s98ms 1s854ms 1s479ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by fg.nm_sort, tg.nm_sort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Mar 12 05 2 3s69ms 1s534ms Mar 13 05 2 2s742ms 1s371ms Mar 14 05 2 3s312ms 1s656ms Mar 15 05 2 2s785ms 1s392ms Mar 16 05 2 2s885ms 1s442ms [ User: pubeu - Total duration: 6s55ms - Times executed: 4 ]
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-03-14 05:48:09 Duration: 1s854ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-03-13 05:48:10 Duration: 1s643ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-03-12 05:48:13 Duration: 1s565ms Database: ctddev51 User: pubeu Bind query: yes
6 7 18s586ms 1s10ms 3s386ms 2s655ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Mar 12 05 1 3s235ms 3s235ms Mar 13 05 1 3s286ms 3s286ms Mar 14 05 1 3s386ms 3s386ms Mar 15 05 2 4s335ms 2s167ms Mar 16 05 2 4s342ms 2s171ms [ User: pubeu - Total duration: 16s556ms - Times executed: 5 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-14 05:45:12 Duration: 3s386ms Database: ctddev51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-15 05:45:12 Duration: 3s324ms Database: ctddev51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-16 05:45:12 Duration: 3s323ms Database: ctddev51 User: pubeu Bind query: yes
7 5 1m15s 15s141ms 15s229ms 15s181ms select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and chemterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and viageneptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and geneterm.id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and phenotypeterm.id = any (array ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?)))) and diseaseterm.id = any (array ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Mar 12 05 1 15s141ms 15s141ms Mar 13 05 1 15s180ms 15s180ms Mar 14 05 1 15s145ms 15s145ms Mar 15 05 1 15s212ms 15s212ms Mar 16 05 1 15s229ms 15s229ms -
select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-16 05:49:10 Duration: 15s229ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-15 05:49:10 Duration: 15s212ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-13 05:49:11 Duration: 15s180ms Bind query: yes
8 5 29s667ms 5s773ms 6s42ms 5s933ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Mar 12 05 1 5s773ms 5s773ms Mar 13 05 1 6s1ms 6s1ms Mar 14 05 1 5s941ms 5s941ms Mar 15 05 1 6s42ms 6s42ms Mar 16 05 1 5s908ms 5s908ms [ User: pubeu - Total duration: 11s951ms - Times executed: 2 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-15 05:48:46 Duration: 6s42ms Database: ctddev51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-13 05:48:46 Duration: 6s1ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-14 05:48:46 Duration: 5s941ms Bind query: yes
9 5 28s942ms 5s665ms 5s974ms 5s788ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Mar 12 05 1 5s754ms 5s754ms Mar 13 05 1 5s871ms 5s871ms Mar 14 05 1 5s665ms 5s665ms Mar 15 05 1 5s974ms 5s974ms Mar 16 05 1 5s676ms 5s676ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-15 05:48:52 Duration: 5s974ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-13 05:48:52 Duration: 5s871ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-12 05:48:57 Duration: 5s754ms Bind query: yes
10 5 17s559ms 3s452ms 3s591ms 3s511ms select gcr.ixn_id, null, null, null from gene_chem_reference gcr where gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?));Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Mar 12 05 1 3s591ms 3s591ms Mar 13 05 1 3s452ms 3s452ms Mar 14 05 1 3s501ms 3s501ms Mar 15 05 1 3s499ms 3s499ms Mar 16 05 1 3s514ms 3s514ms [ User: pubeu - Total duration: 17s559ms - Times executed: 5 ]
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-12 05:47:19 Duration: 3s591ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-16 05:47:19 Duration: 3s514ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-14 05:47:18 Duration: 3s501ms Database: ctddev51 User: pubeu Bind query: yes
11 5 17s22ms 3s347ms 3s462ms 3s404ms select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Mar 12 05 1 3s462ms 3s462ms Mar 13 05 1 3s393ms 3s393ms Mar 14 05 1 3s460ms 3s460ms Mar 15 05 1 3s347ms 3s347ms Mar 16 05 1 3s358ms 3s358ms -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-12 05:47:23 Duration: 3s462ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-14 05:47:22 Duration: 3s460ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-13 05:47:22 Duration: 3s393ms Bind query: yes
12 5 15s544ms 3s31ms 3s162ms 3s108ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select tp.term_id from term_pathway tp where upper(tp.pathway_nm) like ? and tp.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by g.nm_sort, c.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Mar 12 05 1 3s79ms 3s79ms Mar 13 05 1 3s127ms 3s127ms Mar 14 05 1 3s143ms 3s143ms Mar 15 05 1 3s31ms 3s31ms Mar 16 05 1 3s162ms 3s162ms -
SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-16 05:47:30 Duration: 3s162ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-14 05:47:30 Duration: 3s143ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-13 05:47:29 Duration: 3s127ms Bind query: yes
13 5 13s329ms 2s615ms 2s715ms 2s665ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Mar 12 05 1 2s615ms 2s615ms Mar 13 05 1 2s644ms 2s644ms Mar 14 05 1 2s684ms 2s684ms Mar 15 05 1 2s670ms 2s670ms Mar 16 05 1 2s715ms 2s715ms -
SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-16 05:48:26 Duration: 2s715ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-14 05:48:27 Duration: 2s684ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-15 05:48:26 Duration: 2s670ms Bind query: yes
14 5 7s564ms 1s419ms 1s653ms 1s512ms select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where gcr.taxon_id = any (array ( select dp.descendant_object_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Mar 12 05 1 1s653ms 1s653ms Mar 13 05 1 1s496ms 1s496ms Mar 14 05 1 1s529ms 1s529ms Mar 15 05 1 1s419ms 1s419ms Mar 16 05 1 1s465ms 1s465ms -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Name */ dp.descendant_object_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'FELIS CATUS' AND t.object_type_id = 1)) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-12 05:47:26 Duration: 1s653ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Name */ dp.descendant_object_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'FELIS CATUS' AND t.object_type_id = 1)) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-14 05:47:25 Duration: 1s529ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Name */ dp.descendant_object_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'FELIS CATUS' AND t.object_type_id = 1)) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-13 05:47:25 Duration: 1s496ms Bind query: yes
15 5 6s665ms 1s267ms 1s404ms 1s333ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Mar 12 05 1 1s404ms 1s404ms Mar 13 05 1 1s267ms 1s267ms Mar 14 05 1 1s292ms 1s292ms Mar 15 05 1 1s348ms 1s348ms Mar 16 05 1 1s353ms 1s353ms -
SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-03-12 05:47:09 Duration: 1s404ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-03-16 05:47:09 Duration: 1s353ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-03-15 05:47:09 Duration: 1s348ms Bind query: yes
16 5 6s598ms 1s260ms 1s426ms 1s319ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by gt.nm_sort desc limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Mar 12 05 1 1s426ms 1s426ms Mar 13 05 1 1s323ms 1s323ms Mar 14 05 1 1s299ms 1s299ms Mar 15 05 1 1s260ms 1s260ms Mar 16 05 1 1s288ms 1s288ms [ User: pubeu - Total duration: 5s171ms - Times executed: 4 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1275443' AND te.enriched_object_type_id = 5 ORDER BY gt.nm_sort DESC LIMIT 50;
Date: 2024-03-12 05:47:50 Duration: 1s426ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1275443' AND te.enriched_object_type_id = 5 ORDER BY gt.nm_sort DESC LIMIT 50;
Date: 2024-03-13 05:47:47 Duration: 1s323ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1275443' AND te.enriched_object_type_id = 5 ORDER BY gt.nm_sort DESC LIMIT 50;
Date: 2024-03-14 05:47:48 Duration: 1s299ms Database: ctddev51 User: pubeu Bind query: yes
17 5 6s568ms 1s303ms 1s319ms 1s313ms select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and chemterm.id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Mar 12 05 1 1s310ms 1s310ms Mar 13 05 1 1s314ms 1s314ms Mar 14 05 1 1s319ms 1s319ms Mar 15 05 1 1s319ms 1s319ms Mar 16 05 1 1s303ms 1s303ms -
select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC') and chemTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC') and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-14 05:48:54 Duration: 1s319ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC') and chemTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC') and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-15 05:48:53 Duration: 1s319ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC') and chemTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC') and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-13 05:48:54 Duration: 1s314ms Bind query: yes
18 5 6s61ms 1s153ms 1s243ms 1s212ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Mar 12 05 1 1s243ms 1s243ms Mar 13 05 1 1s241ms 1s241ms Mar 14 05 1 1s153ms 1s153ms Mar 15 05 1 1s222ms 1s222ms Mar 16 05 1 1s200ms 1s200ms [ User: pubeu - Total duration: 2s395ms - Times executed: 2 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2036477') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2036477') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-03-12 05:48:44 Duration: 1s243ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2036477') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2036477') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-03-13 05:48:40 Duration: 1s241ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2036477') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2036477') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-03-15 05:48:39 Duration: 1s222ms Bind query: yes
19 5 5s755ms 1s110ms 1s178ms 1s151ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Mar 12 05 1 1s178ms 1s178ms Mar 13 05 1 1s171ms 1s171ms Mar 14 05 1 1s110ms 1s110ms Mar 15 05 1 1s159ms 1s159ms Mar 16 05 1 1s136ms 1s136ms [ User: pubeu - Total duration: 1s178ms - Times executed: 1 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1196392') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1196392') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-03-12 05:48:42 Duration: 1s178ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1196392') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1196392') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-03-13 05:48:37 Duration: 1s171ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1196392') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1196392') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-03-15 05:48:36 Duration: 1s159ms Bind query: yes
20 5 5s330ms 1s20ms 1s170ms 1s66ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by tg.nm_sort, fg.nm_sort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Mar 12 05 1 1s170ms 1s170ms Mar 13 05 1 1s43ms 1s43ms Mar 14 05 1 1s68ms 1s68ms Mar 15 05 1 1s20ms 1s20ms Mar 16 05 1 1s26ms 1s26ms [ User: pubeu - Total duration: 1s20ms - Times executed: 1 ]
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY tg.nm_sort, fg.nm_sort LIMIT 50;
Date: 2024-03-12 05:48:15 Duration: 1s170ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY tg.nm_sort, fg.nm_sort LIMIT 50;
Date: 2024-03-14 05:48:12 Duration: 1s68ms Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY tg.nm_sort, fg.nm_sort LIMIT 50;
Date: 2024-03-13 05:48:11 Duration: 1s43ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 1m53s 2m52s 2m13s 14 31m14s select distinct primarygeneterm.acc_txt, taxonterm.acc_txt, gt.gene_acc_txt from pub1.gene_taxon gt, pub1.term primarygeneterm, pub1.term taxonterm where gt.gene_id = primarygeneterm.id and gt.taxon_id = taxonterm.id;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Mar 12 09 1 1m53s 1m53s 10 5 10m53s 2m10s 12 1 2m12s 2m12s 13 1 2m8s 2m8s 14 1 2m8s 2m8s Mar 13 12 2 4m12s 2m6s 13 1 2m17s 2m17s 16 1 2m36s 2m36s Mar 14 10 1 2m52s 2m52s [ User: load - Total duration: 31m14s - Times executed: 14 ]
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-14 10:09:22 Duration: 2m52s Database: ctddev51 User: load Bind query: yes
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-13 16:00:41 Duration: 2m36s Database: ctddev51 User: load Bind query: yes
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select distinct primaryGeneTerm.acc_txt, taxonTerm.acc_txt, gt.gene_acc_txt from pub1.GENE_TAXON gt, pub1.TERM primaryGeneTerm, pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id;
Date: 2024-03-12 10:54:07 Duration: 2m18s Database: ctddev51 User: load Bind query: yes
2 25s871ms 25s871ms 25s871ms 1 25s871ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and emt.object_type_id = t.object_type_id left outer join pub2.medium m on m.id = ee.medium_id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id where e.reference_acc_txt not in (...);Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Mar 14 14 1 25s871ms 25s871ms [ User: edit - Total duration: 25s871ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:8122306 - Total duration: 25s871ms - Times executed: 1 ]
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SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND emt.object_type_id = t.object_type_id LEFT OUTER JOIN PUB2.MEDIUM m ON m.id = ee.medium_id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id WHERE e.reference_acc_txt NOT IN ('37741207', '37611859', '37134253', '38385684', '37560165', '37545493', '37141245', '37162236', '37167483', '37224071', '36657687', '37120575');
Date: 2024-03-14 14:33:47 Duration: 25s871ms Database: ctddev51 User: edit Application: pgAdmin 4 - CONN:8122306
3 1s73ms 57s773ms 25s386ms 44 18m37s select id, object_type_id, acc_txt, t.acc_db_cd, nm, nm_sort, secondary_nm, description, note from pub1.term t where object_type_id = ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Mar 12 09 3 1m17s 25s825ms 10 17 6m21s 22s417ms 12 3 1m22s 27s361ms 13 3 1m15s 25s145ms 14 3 1m6s 22s86ms Mar 13 12 6 2m39s 26s610ms 13 3 1m25s 28s415ms 16 3 1m36s 32s65ms Mar 14 10 3 1m33s 31s183ms -
select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-13 16:01:45 Duration: 57s773ms Bind query: yes
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select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-14 10:10:23 Duration: 54s758ms Bind query: yes
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select ID, OBJECT_TYPE_ID, ACC_TXT, t.ACC_DB_CD, NM, NM_SORT, SECONDARY_NM, DESCRIPTION, NOTE from pub1.term t where object_type_id = 1;
Date: 2024-03-12 12:37:43 Duration: 50s893ms Bind query: yes
4 23s18ms 23s18ms 23s18ms 1 23s18ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt inner join edit.exposure e on e.exp_event_id = ee.id where e.reference_acc_txt not in (...);Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Mar 13 13 1 23s18ms 23s18ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893');
Date: 2024-03-13 13:14:01 Duration: 23s18ms
5 21s505ms 21s505ms 21s505ms 1 21s505ms select distinct ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and emt.object_type_id = t.object_type_id left outer join pub2.medium m on m.id = ee.medium_id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id where e.reference_acc_txt not in (...);Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Mar 14 14 1 21s505ms 21s505ms -
SELECT distinct ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND emt.object_type_id = t.object_type_id LEFT OUTER JOIN PUB2.MEDIUM m ON m.id = ee.medium_id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id WHERE e.reference_acc_txt NOT IN ('37741207', '37611859', '37134253', '38385684', '37560165', '37545493', '37141245', '37162236', '37167483', '37224071', '36657687', '37120575');
Date: 2024-03-14 14:34:46 Duration: 21s505ms
6 20s918ms 20s918ms 20s918ms 1 20s918ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt inner join edit.exposure e on e.exp_event_id = ee.id;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Mar 13 13 1 20s918ms 20s918ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id;
Date: 2024-03-13 13:09:46 Duration: 20s918ms
7 20s774ms 20s774ms 20s774ms 1 20s774ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt inner join edit.exposure e on e.exp_event_id = ee.id where e.reference_acc_txt not in (...) order by ee.id;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Mar 13 13 1 20s774ms 20s774ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') order by ee.id;
Date: 2024-03-13 13:15:14 Duration: 20s774ms
8 20s12ms 20s12ms 20s12ms 1 20s12ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id where e.reference_acc_txt not in (...) and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id where e.reference_acc_txt not in (...) and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id where e.reference_acc_txt not in (...); , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id where e.reference_acc_txt not in (...) and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id inner join pub2.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id --and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Mar 13 14 1 20s12ms 20s12ms -
SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id -- ,ee.medium_nm -- get from pub medium table -- ,m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id -- ,ee.medium_term_acc_txt -- get from pub medium table , -- ,m.term_acc_txt ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query -- LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') -- and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> ''; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm -- ,ee.medium_term_id -- get from pub term table -- ,mt.id , -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ; , ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id -- LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '';
Date: 2024-03-13 14:00:18 Duration: 20s12ms
9 15s141ms 15s229ms 15s181ms 5 1m15s select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where viachemptr.via_term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and chemterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and viageneptr.via_term_id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and geneterm.id in ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and upper(baseterm.nm) like ?) and phenotypeterm.id = any (array ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?)))) and diseaseterm.id = any (array ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by chemterm.nm limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Mar 12 05 1 15s141ms 15s141ms Mar 13 05 1 15s180ms 15s180ms Mar 14 05 1 15s145ms 15s145ms Mar 15 05 1 15s212ms 15s212ms Mar 16 05 1 15s229ms 15s229ms -
select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-16 05:49:10 Duration: 15s229ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-15 05:49:10 Duration: 15s212ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where viaChemPTR.via_term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and chemTerm.id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and viaGenePTR.via_term_id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and geneTerm.id IN ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 4 and upper(baseTerm.nm) LIKE 'BCL2') and phenotypeTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5)))) and diseaseTerm.id = ANY (ARRAY ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 3 and upper(baseTerm.nm) LIKE 'NECROSIS'))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by chemTerm.nm LIMIT 50;
Date: 2024-03-13 05:49:11 Duration: 15s180ms Bind query: yes
10 12s595ms 12s595ms 12s595ms 1 12s595ms select ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, t.id, ee.exp_marker_type_id, ee.medium_id, m.nm, mt.id, m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html from edit.exp_event ee inner join edit.exposure e on e.exp_event_id = ee.id and e.reference_acc_txt not in (...) inner join edit.exp_marker_type emt on ee.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on ee.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id left outer join pub2.medium m on ee.medium_id = m.id left outer join pub2.term mt on m.term_acc_txt = mt.acc_txt and m.term_object_type_id = mt.object_type_id --and ee.exp_marker_acc_txt is not null and ee.exp_marker_acc_txt <> ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Mar 14 12 1 12s595ms 12s595ms [ User: pub2 - Total duration: 12s595ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:9711838 - Total duration: 12s595ms - Times executed: 1 ]
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SELECT ee.exp_marker_lvl, ee.exp_marker_lvl_range, ee.detection_limit_uom, ee.note, ee.detection_freq, ee.detection_freq_range, ee.collection_end_yr, ee.detection_limit_is_loq, ee.detection_limit, ee.detection_limit_range, ee.assay_note, ee.assay_measurement_stat, ee.exp_marker_actor_form_type_id, ee.exp_marker_acc_db_id, ee.exp_marker_acc_txt, ee.collection_start_yr, ee.assay_uom, -- ,ee.exp_marker_term_id -- get from term table t.id, ee.exp_marker_type_id, ee.medium_id, -- ,ee.medium_nm -- get from pub medium table m.nm, -- ,ee.medium_term_id -- get from pub term table mt.id, -- ,ee.medium_term_acc_txt -- get from pub medium table m.term_acc_txt, ee.has_locations, ee.id, ee.exp_marker_term_nm, t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id AND e.reference_acc_txt NOT IN ('11874814', '12819278', '14527848', '12003754', '12948893') INNER JOIN edit.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt AND m.term_object_type_id = mt.object_type_id -- WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') --and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '';
Date: 2024-03-14 12:56:09 Duration: 12s595ms Database: ctddev51 User: pub2 Application: pgAdmin 4 - CONN:9711838
11 1s33ms 3m43s 9s331ms 86 13m22s select t.id, t.object_type_id, t.acc_txt, t.acc_db_cd, t.nm, t.nm_sort, t.secondary_nm, t.description, t.note, l.nm from pub1.term t, pub1.term_label l where t.object_type_id = ? and t.id = l.term_id;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Mar 12 12 5 24s189ms 4s837ms 13 3 9s277ms 3s92ms 14 6 20s492ms 3s415ms Mar 13 09 5 17s297ms 3s459ms 10 10 35s618ms 3s561ms Mar 14 10 14 55s573ms 3s969ms 11 5 19s79ms 3s815ms 12 17 9m6s 32s153ms 13 8 28s477ms 3s559ms 14 13 45s912ms 3s531ms [ User: editeu - Total duration: 13m22s - Times executed: 86 ]
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 3 and t.id = l.TERM_ID;
Date: 2024-03-14 12:41:07 Duration: 3m43s Database: ctddev51 User: editeu Bind query: yes
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 5 and t.id = l.TERM_ID;
Date: 2024-03-14 12:37:37 Duration: 2m13s Database: ctddev51 User: editeu Bind query: yes
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select t.ID, t.OBJECT_TYPE_ID, t.ACC_TXT, t.ACC_DB_CD, t.NM, t.NM_SORT, t.SECONDARY_NM, t.DESCRIPTION, t.NOTE, l.NM from pub1.TERM t, pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 2 and t.id = l.TERM_ID;
Date: 2024-03-14 12:37:23 Duration: 1m59s Database: ctddev51 User: editeu Bind query: yes
12 5s773ms 6s42ms 5s933ms 5 29s667ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Mar 12 05 1 5s773ms 5s773ms Mar 13 05 1 6s1ms 6s1ms Mar 14 05 1 5s941ms 5s941ms Mar 15 05 1 6s42ms 6s42ms Mar 16 05 1 5s908ms 5s908ms [ User: pubeu - Total duration: 11s951ms - Times executed: 2 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-15 05:48:46 Duration: 6s42ms Database: ctddev51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-13 05:48:46 Duration: 6s1ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ZINC')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006915' AND l.type_cd = 'A' AND l.object_type_id = 5))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9606' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-14 05:48:46 Duration: 5s941ms Bind query: yes
13 5s665ms 5s974ms 5s788ms 5 28s942ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?)) and ptr.term_object_type_id = ? and ptr.phenotype_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and upper(baseterm.nm) like ?))) and taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select object_id from db_link l where l.acc_txt = ? and l.type_cd = ? and l.object_type_id = ?))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = ? and action_degree_type_nm in (...)) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Mar 12 05 1 5s754ms 5s754ms Mar 13 05 1 5s871ms 5s871ms Mar 14 05 1 5s665ms 5s665ms Mar 15 05 1 5s974ms 5s974ms Mar 16 05 1 5s676ms 5s676ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-15 05:48:52 Duration: 5s974ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-13 05:48:52 Duration: 5s871ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and upper(baseTerm.nm) LIKE 'ACETYLCYSTEINE')) and ptr.term_object_type_id = 2 and ptr.phenotype_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 5 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = 'GO:0006979' AND l.type_cd = 'A' AND l.object_type_id = 5))) and i.id in ( select ixn_id from ixn_anatomy where anatomy_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 10 and upper(baseTerm.nm) LIKE 'CARDIOVASCULAR SYSTEM'))) and taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select object_id from db_link l where l.acc_txt = '9605' AND l.type_cd = 'A' AND l.object_type_id = 1))) and i.id in ( select ixn_id from ixn_axn where action_type_nm = 'phenotype' and action_degree_type_nm in ('increases')) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-03-12 05:48:57 Duration: 5s754ms Bind query: yes
14 3s452ms 3s591ms 3s511ms 5 17s559ms select gcr.ixn_id, null, null, null from gene_chem_reference gcr where gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?));Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Mar 12 05 1 3s591ms 3s591ms Mar 13 05 1 3s452ms 3s452ms Mar 14 05 1 3s501ms 3s501ms Mar 15 05 1 3s499ms 3s499ms Mar 16 05 1 3s514ms 3s514ms [ User: pubeu - Total duration: 17s559ms - Times executed: 5 ]
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-12 05:47:19 Duration: 3s591ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-16 05:47:19 Duration: 3s514ms Database: ctddev51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, NULL, NULL FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'));
Date: 2024-03-14 05:47:18 Duration: 3s501ms Database: ctddev51 User: pubeu Bind query: yes
15 3s347ms 3s462ms 3s404ms 5 17s22ms select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Mar 12 05 1 3s462ms 3s462ms Mar 13 05 1 3s393ms 3s393ms Mar 14 05 1 3s460ms 3s460ms Mar 15 05 1 3s347ms 3s347ms Mar 16 05 1 3s358ms 3s358ms -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-12 05:47:23 Duration: 3s462ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-14 05:47:22 Duration: 3s460ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'ASTHMA' AND t.object_type_id = 3))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-13 05:47:22 Duration: 3s393ms Bind query: yes
16 3s31ms 3s162ms 3s108ms 5 15s544ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select tp.term_id from term_pathway tp where upper(tp.pathway_nm) like ? and tp.object_type_id = ?))) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by g.nm_sort, c.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Mar 12 05 1 3s79ms 3s79ms Mar 13 05 1 3s127ms 3s127ms Mar 14 05 1 3s143ms 3s143ms Mar 15 05 1 3s31ms 3s31ms Mar 16 05 1 3s162ms 3s162ms -
SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-16 05:47:30 Duration: 3s162ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-14 05:47:30 Duration: 3s143ms Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE 'METABOLISM' AND tp.object_type_id = 4))) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases')) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY g.nm_sort, c.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-03-13 05:47:29 Duration: 3s127ms Bind query: yes
17 2s615ms 2s715ms 2s665ms 5 13s329ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Mar 12 05 1 2s615ms 2s615ms Mar 13 05 1 2s644ms 2s644ms Mar 14 05 1 2s684ms 2s684ms Mar 15 05 1 2s670ms 2s670ms Mar 16 05 1 2s715ms 2s715ms -
SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-16 05:48:26 Duration: 2s715ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-14 05:48:27 Duration: 2s684ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1275443)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-03-15 05:48:26 Duration: 2s670ms Bind query: yes
18 1s10ms 3s386ms 2s655ms 7 18s586ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Mar 12 05 1 3s235ms 3s235ms Mar 13 05 1 3s286ms 3s286ms Mar 14 05 1 3s386ms 3s386ms Mar 15 05 2 4s335ms 2s167ms Mar 16 05 2 4s342ms 2s171ms [ User: pubeu - Total duration: 16s556ms - Times executed: 5 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-14 05:45:12 Duration: 3s386ms Database: ctddev51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-15 05:45:12 Duration: 3s324ms Database: ctddev51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '584887' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-03-16 05:45:12 Duration: 3s323ms Database: ctddev51 User: pubeu Bind query: yes
19 1s765ms 2s238ms 1s962ms 20 39s249ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Mar 12 05 4 8s465ms 2s116ms Mar 13 05 4 8s446ms 2s111ms Mar 14 05 4 7s277ms 1s819ms Mar 15 05 4 7s192ms 1s798ms Mar 16 05 4 7s867ms 1s966ms -
SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1275443')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-12 05:47:59 Duration: 2s238ms Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2036477')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-13 05:48:05 Duration: 2s227ms Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2036477')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-03-13 05:48:02 Duration: 2s221ms Bind query: yes
20 1s419ms 1s653ms 1s512ms 5 7s564ms select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where gcr.taxon_id = any (array ( select dp.descendant_object_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.id in ( select gcra.gene_chem_reference_id from gene_chem_reference_axn gcra where (gcra.action_degree_type_nm = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Mar 12 05 1 1s653ms 1s653ms Mar 13 05 1 1s496ms 1s496ms Mar 14 05 1 1s529ms 1s529ms Mar 15 05 1 1s419ms 1s419ms Mar 16 05 1 1s465ms 1s465ms -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Name */ dp.descendant_object_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'FELIS CATUS' AND t.object_type_id = 1)) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-12 05:47:26 Duration: 1s653ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Name */ dp.descendant_object_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'FELIS CATUS' AND t.object_type_id = 1)) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-14 05:47:25 Duration: 1s529ms Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Name */ dp.descendant_object_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'FELIS CATUS' AND t.object_type_id = 1)) AND gcr.id IN ( SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases'))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-03-13 05:47:25 Duration: 1s496ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
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Events
Log levels
Key values
- 171,435 Log entries
Events distribution
Key values
- 0 PANIC entries
- 27 FATAL entries
- 93 ERROR entries
- 0 WARNING entries
Most Frequent Errors/Events
Key values
- 25 Max number of times the same event was reported
- 120 Total events found
Rank Times reported Error 1 25 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #1
Day Hour Count Mar 12 09 1 10 4 11 1 12 1 13 1 14 1 15 1 Mar 13 11 1 12 2 15 1 17 1 Mar 14 10 1 12 5 13 1 14 3 2 22 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #2
Day Hour Count Mar 12 18 3 19 5 20 1 Mar 13 20 3 21 1 Mar 14 18 2 19 5 Mar 15 22 2 3 17 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #3
Day Hour Count Mar 12 09 1 Mar 13 09 1 13 12 Mar 14 12 3 - ERROR: syntax error at or near "where" at character 41
- ERROR: syntax error at or near "." at character 19
- ERROR: syntax error at or near "=" at character 63
Statement: select * from pub2.gene_taxon limit 100 where gene_acc_txt = '4498'
Date: 2024-03-12 09:59:24 Database: ctddev51 Application: pgAdmin 4 - CONN:6193705 User: edit Remote:
Statement: SELECT id FROMedit.MEDIUM WHERE nm=''
Date: 2024-03-13 09:56:26
Statement: select * from tm_reference where abstract_txt = '' || title = '' || authors.txt = '' || journal.txt = '' -- where acc_txt = '27915011'
Date: 2024-03-13 13:05:18
4 16 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #4
Day Hour Count Mar 12 10 1 13 1 Mar 13 15 1 Mar 14 10 1 12 12 - ERROR: could not send data to client: Connection reset by peer
- ERROR: could not send data to client: Connection reset by peer
- ERROR: could not send data to client: Connection reset by peer
Statement: select distinct primaryGeneTerm.acc_txt ,taxonTerm.acc_txt ,gt.gene_acc_txt from pub1.GENE_TAXON gt ,pub1.TERM primaryGeneTerm ,pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id
Date: 2024-03-12 10:17:05 Database: ctddev51 Application: User: load Remote:
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 4 and t.id = l.TERM_ID
Date: 2024-03-14 10:49:57 Database: ctddev51 Application: User: editeu Remote:
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 1 and t.id = l.TERM_ID
Date: 2024-03-14 12:41:36 Database: ctddev51 Application: User: editeu Remote:
5 16 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #5
Day Hour Count Mar 12 10 1 13 1 Mar 13 15 1 Mar 14 10 1 12 12 - FATAL: connection to client lost
- FATAL: connection to client lost
- FATAL: connection to client lost
Statement: select distinct primaryGeneTerm.acc_txt ,taxonTerm.acc_txt ,gt.gene_acc_txt from pub1.GENE_TAXON gt ,pub1.TERM primaryGeneTerm ,pub1.TERM taxonTerm where gt.gene_id = primaryGeneTerm.id and gt.taxon_id = taxonTerm.id
Date: 2024-03-12 10:17:05
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 4 and t.id = l.TERM_ID
Date: 2024-03-14 10:49:57
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 1 and t.id = l.TERM_ID
Date: 2024-03-14 12:41:36
6 9 FATAL: terminating background worker "..." due to administrator command
Times Reported Most Frequent Error / Event #6
Day Hour Count Mar 14 12 9 - FATAL: terminating background worker "parallel worker" due to administrator command
Statement: select t.ID ,t.OBJECT_TYPE_ID ,t.ACC_TXT ,t.ACC_DB_CD ,t.NM ,t.NM_SORT ,t.SECONDARY_NM ,t.DESCRIPTION ,t.NOTE ,l.NM from pub1.TERM t ,pub1.TERM_LABEL l where t.OBJECT_TYPE_ID = 2 and t.id = l.TERM_ID
Date: 2024-03-14 12:41:36
7 4 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #7
Day Hour Count Mar 13 13 1 15 3 - ERROR: column "authors_txt" does not exist at character 42
- ERROR: column "2024312" does not exist at character 53
- ERROR: column "2024/03/12" does not exist at character 53
Statement: select * from tm_reference_term where authors_txt = ''-- or journal_txt = '' limit 1000
Date: 2024-03-13 13:54:57
Statement: select * from tm_reference_term where create_tm > "2024312"
Date: 2024-03-13 15:49:58
Statement: select * from tm_reference_term where create_tm > "2024/03/12"
Date: 2024-03-13 15:50:13
8 4 ERROR: missing FROM-clause entry for table "..."
Times Reported Most Frequent Error / Event #8
Day Hour Count Mar 13 13 4 - ERROR: missing FROM-clause entry for table "authors" at character 72
- ERROR: missing FROM-clause entry for table "authors" at character 74
- ERROR: missing FROM-clause entry for table "authors" at character 60
Statement: select * from tm_reference where abstract_txt = '' or title = '' or authors.txt = '' or journal.txt = '' -- where acc_txt = '27915011'
Date: 2024-03-13 13:06:11
Statement: select * from tm_reference where ( abstract_txt = '' or title = '' or authors.txt = '' or journal.txt = '' ) -- where acc_txt = '27915011'
Date: 2024-03-13 13:06:27
Statement: select * from tm_reference where abstract_txt = '' or authors.txt = '' -- or journal.txt = '' ) -- where acc_txt = '27915011'
Date: 2024-03-13 13:07:20
9 2 ERROR: canceling statement due to user request
Times Reported Most Frequent Error / Event #9
Day Hour Count Mar 13 13 2 - ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
Statement: SELECT ee.exp_marker_lvl ,ee.exp_marker_lvl_range ,ee.detection_limit_uom ,ee.note ,ee.detection_freq ,ee.detection_freq_range ,ee.collection_end_yr ,ee.detection_limit_is_loq ,ee.detection_limit ,ee.detection_limit_range ,ee.assay_note ,ee.assay_measurement_stat ,ee.exp_marker_actor_form_type_id ,ee.exp_marker_acc_db_id ,ee.exp_marker_acc_txt ,ee.collection_start_yr ,ee.assay_uom -- ,ee.exp_marker_term_id -- get from term table ,t.id ,ee.exp_marker_type_id ,ee.medium_id -- ,ee.medium_nm -- get from pub medium table ,m.nm -- ,ee.medium_term_id -- get from pub term table ,mt.id -- ,ee.medium_term_acc_txt -- get from pub medium table ,m.term_acc_txt ,ee.has_locations ,ee.id ,ee.exp_marker_term_nm ,t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = e.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') ;
Date: 2024-03-13 13:32:20
Statement: SELECT ee.exp_marker_lvl ,ee.exp_marker_lvl_range ,ee.detection_limit_uom ,ee.note ,ee.detection_freq ,ee.detection_freq_range ,ee.collection_end_yr ,ee.detection_limit_is_loq ,ee.detection_limit ,ee.detection_limit_range ,ee.assay_note ,ee.assay_measurement_stat ,ee.exp_marker_actor_form_type_id ,ee.exp_marker_acc_db_id ,ee.exp_marker_acc_txt ,ee.collection_start_yr ,ee.assay_uom -- ,ee.exp_marker_term_id -- get from term table ,t.id ,ee.exp_marker_type_id ,ee.medium_id -- ,ee.medium_nm -- get from pub medium table ,m.nm -- ,ee.medium_term_id -- get from pub term table ,mt.id -- ,ee.medium_term_acc_txt -- get from pub medium table ,m.term_acc_txt ,ee.has_locations ,ee.id ,ee.exp_marker_term_nm ,t.nm_html FROM EDIT.EXP_EVENT ee INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = e.id INNER JOIN pub2.EXP_MARKER_TYPE emt ON ee.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt WHERE e.reference_acc_txt NOT IN ('11874814','12819278','14527848','12003754','12948893') and ee.exp_marker_acc_txt is not null AND ee.exp_marker_acc_txt <> '' ;
Date: 2024-03-13 13:57:58
10 2 FATAL: password authentication failed for user "..."
Times Reported Most Frequent Error / Event #10
Day Hour Count Mar 12 09 2 - FATAL: password authentication failed for user "edit"
Detail: Connection matched pg_hba.conf line 85: "host all all 192.168.201.0/24 md5 "
Date: 2024-03-12 09:56:44
11 1 ERROR: date/time field value out of range: "..."
Times Reported Most Frequent Error / Event #11
Day Hour Count Mar 13 15 1 - ERROR: date/time field value out of range: "2024312" at character 53
Hint: Perhaps you need a different "datestyle" setting.
Statement: select * from tm_reference_term where create_tm > '2024312'Date: 2024-03-13 15:49:42
12 1 ERROR: operator does not exist: character varying <> integer
Times Reported Most Frequent Error / Event #12
Day Hour Count Mar 13 13 1 - ERROR: operator does not exist: character varying <> integer at character 1621
Hint: No operator matches the given name and argument types. You might need to add explicit type casts.
Statement: SELECT ee.exp_marker_lvl ,ee.exp_marker_lvl_range ,ee.detection_limit_uom ,ee.note ,ee.detection_freq ,ee.detection_freq_range ,ee.collection_end_yr ,ee.detection_limit_is_loq ,ee.detection_limit ,ee.detection_limit_range ,ee.assay_note ,ee.assay_measurement_stat ,ee.exp_marker_actor_form_type_id ,ee.exp_marker_acc_db_id ,ee.exp_marker_acc_txt ,ee.collection_start_yr ,ee.assay_uom -- ,ee.exp_marker_term_id -- get from term table ,t.id ,ee.exp_marker_type_id ,ee.medium_id -- ,ee.medium_nm -- get from pub medium table ,m.nm -- ,ee.medium_term_id -- get from pub term table ,mt.id -- ,ee.medium_term_acc_txt -- get from pub medium table ,m.term_acc_txt ,ee.has_locations ,ee.id ,ee.exp_marker_term_nm ,t.nm_html FROM EDIT.EXP_EVENT ee LEFT OUTER JOIN pub2.TERM t ON ee.exp_marker_acc_txt = t.acc_txt -- ON ee.exp_marker_term_id = t.id -- get where clause from errant query LEFT OUTER JOIN PUB2.MEDIUM m ON ee.medium_id = m.id LEFT OUTER JOIN PUB2.TERM mt ON m.term_acc_txt = mt.acc_txt INNER JOIN EDIT.EXPOSURE e ON e.exp_event_id = ee.id WHERE e.reference_acc_txt NOT IN (11874814,12819278,14527848,12003754,12948893);Date: 2024-03-13 13:12:59
13 1 ERROR: function str(...) does not exist
Times Reported Most Frequent Error / Event #13
Day Hour Count Mar 13 15 1 - ERROR: function str(timestamp without time zone) does not exist at character 41
Hint: No function matches the given name and argument types. You might need to add explicit type casts.
Statement: select * from tm_reference_term where str( create_tm ) > "03/12/2024"Date: 2024-03-13 15:50:35