pgBadger-
Global information
- Generated on Wed Jan 14 04:10:04 2026
- Log file: /project/archive/log/postgres/dbdev51/postgresql.log-20260113
- Parsed 704 log entries in 2s
- Log start from 2026-01-13 11:29:40 to 2026-01-13 19:20:58
-
Overview
Global Stats
- 2 Number of unique normalized queries
- 4 Number of queries
- 22s242ms Total query duration
- 2026-01-13 12:11:05 First query
- 2026-01-13 14:04:08 Last query
- 1 queries/s at 2026-01-13 13:49:54 Query peak
- 22s242ms Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 22s242ms Execute total duration
- 18 Number of events
- 10 Number of unique normalized events
- 4 Max number of times the same event was reported
- 0 Number of cancellation
- 0 Total number of automatic vacuums
- 0 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 72 Total number of sessions
- 19 sessions at 2026-01-13 17:06:24 Session peak
- 1d12h44m5s Total duration of sessions
- 30m36s Average duration of sessions
- 0 Average queries per session
- 308ms Average queries duration per session
- 30m36s Average idle time per session
- 72 Total number of connections
- 8 connections/s at 2026-01-13 11:29:41 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-01-13 13:49:54 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-01-13 13:49:54 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 0 queries/s Query Peak
- Date
Queries duration
Key values
- 22s242ms Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 13 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 1 0ms 5s511ms 5s511ms 0ms 5s511ms 5s511ms 13 2 0ms 5s877ms 5s762ms 0ms 11s525ms 11s525ms 14 1 0ms 5s205ms 5s205ms 0ms 5s205ms 5s205ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 13 11 0 0 0ms 0ms 0ms 0ms 12 1 0 5s511ms 0ms 0ms 5s511ms 13 2 0 5s762ms 0ms 0ms 11s525ms 14 1 0 5s205ms 0ms 0ms 5s205ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 13 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jan 13 11 0 0 0.00 0.00% 12 0 1 1.00 0.00% 13 0 2 2.00 0.00% 14 0 1 1.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 19 0 0 0.00 0.00% Day Hour Count Average / Second Jan 13 11 19 0.01/s 12 14 0.00/s 13 14 0.00/s 14 16 0.00/s 15 3 0.00/s 16 3 0.00/s 17 3 0.00/s 19 0 0.00/s Day Hour Count Average Duration Average idle time Jan 13 11 11 19m44s 19m44s 12 14 31m26s 31m26s 13 14 35m24s 35m23s 14 16 28m55s 28m55s 15 11 16m36s 16m36s 16 3 31s697ms 31s697ms 17 0 0ms 0ms 19 3 2h14m39s 2h14m39s -
Connections
Established Connections
Key values
- 8 connections Connection Peak
- 2026-01-13 11:29:41 Date
Connections per database
Key values
- ctddev51 Main Database
- 72 connections Total
Connections per user
Key values
- pubeu Main User
- 72 connections Total
-
Sessions
Simultaneous sessions
Key values
- 19 sessions Session Peak
- 2026-01-13 17:06:24 Date
Histogram of session times
Key values
- 42 1800000-3600000ms duration
Sessions per database
Key values
- ctddev51 Main Database
- 72 sessions Total
Sessions per user
Key values
- pubeu Main User
- 72 sessions Total
Sessions per host
Key values
- 192.168.201.18 Main Host
- 72 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 2,724 buffers Checkpoint Peak
- 2026-01-13 13:54:38 Date
- 272.825 seconds Highest write time
- 0.002 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-01-13 17:20:06 Date
Checkpoints distance
Key values
- 39.54 Mo Distance Peak
- 2026-01-13 13:54:38 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jan 13 11 6 0.706s 0.001s 0.721s 12 12 1.387s 0.002s 1.417s 13 2,724 272.825s 0.002s 272.848s 14 40 4.185s 0.002s 4.222s 15 0 0s 0s 0s 16 1 0.183s 0.001s 0.198s 17 5 0.601s 0.001s 0.618s 19 0 0s 0s 0s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jan 13 11 0 0 0 6 0.001s 0.001s 12 0 0 0 11 0.001s 0.002s 13 0 1 0 19 0.001s 0.001s 14 0 0 0 15 0.001s 0.002s 15 0 0 0 0 0s 0s 16 0 0 0 1 0.001s 0.001s 17 0 0 0 6 0.001s 0.001s 19 0 0 0 0 0s 0s Day Hour Count Avg time (sec) Jan 13 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 19 0 0s Day Hour Mean distance Mean estimate Jan 13 11 19.00 kB 375,403.00 kB 12 26.50 kB 320,973.50 kB 13 20,244.00 kB 275,698.00 kB 14 122.50 kB 235,744.50 kB 15 0.00 kB 0.00 kB 16 0.00 kB 201,003.00 kB 17 22.00 kB 180,905.00 kB 19 0.00 kB 0.00 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jan 13 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 19 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0 sec Highest CPU-cost vacuum
Table
Database - Date
- 0 sec Highest CPU-cost analyze
Table
Database - Date
Autovacuum actions (5 minutes period)
NO DATASET
Average Autovacuum Duration
Key values
- 0 sec Highest CPU-cost vacuum
Table
Database - Date
Average Autovacuum Duration (5 minutes average)
NO DATASET
Analyzes per table
Key values
- unknown (0) Main table analyzed (database )
- 0 analyzes Total
Vacuums per table
Key values
- unknown (0) Main table vacuumed on database
- 0 vacuums Total
Tuples removed per table
Key values
- unknown (0) Main table with removed tuples on database
- 0 tuples Total removed
Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jan 13 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 19 0 0 - 0 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 4 Total read queries
- 0 Total write queries
Queries by database
Key values
- ctddev51 Main database
- 2 Requests
- 11s525ms (unknown)
- Main time consuming database
Queries by user
Key values
- pubeu Main user
- 2 Requests
User Request type Count Duration pubeu Total 2 10s717ms select 2 10s717ms unknown Total 2 11s525ms select 2 11s525ms Duration by user
Key values
- 11s525ms (unknown) Main time consuming user
User Request type Count Duration pubeu Total 2 10s717ms select 2 10s717ms unknown Total 2 11s525ms select 2 11s525ms Queries by host
Key values
- unknown Main host
- 4 Requests
- 22s242ms (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 4 Requests
- 22s242ms (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-01-13 11:56:49 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 4 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 5s877ms SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;[ Date: 2026-01-13 13:49:54 - Bind query: yes ]
2 5s648ms SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;[ Date: 2026-01-13 13:49:50 - Bind query: yes ]
3 5s511ms SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;[ Date: 2026-01-13 12:11:05 - Database: ctddev51 - User: pubeu - Bind query: yes ]
4 5s205ms SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1369920' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;[ Date: 2026-01-13 14:04:08 - Database: ctddev51 - User: pubeu - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 17s36ms 3 5s511ms 5s877ms 5s678ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 13 12 1 5s511ms 5s511ms 13 2 11s525ms 5s762ms [ User: pubeu - Total duration: 5s511ms - Times executed: 1 ]
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 13:49:54 Duration: 5s877ms Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 13:49:50 Duration: 5s648ms Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 12:11:05 Duration: 5s511ms Database: ctddev51 User: pubeu Bind query: yes
2 5s205ms 1 5s205ms 5s205ms 5s205ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 13 14 1 5s205ms 5s205ms [ User: pubeu - Total duration: 5s205ms - Times executed: 1 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1369920' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-13 14:04:08 Duration: 5s205ms Database: ctddev51 User: pubeu Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 3 17s36ms 5s511ms 5s877ms 5s678ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 13 12 1 5s511ms 5s511ms 13 2 11s525ms 5s762ms [ User: pubeu - Total duration: 5s511ms - Times executed: 1 ]
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 13:49:54 Duration: 5s877ms Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 13:49:50 Duration: 5s648ms Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 12:11:05 Duration: 5s511ms Database: ctddev51 User: pubeu Bind query: yes
2 1 5s205ms 5s205ms 5s205ms 5s205ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 13 14 1 5s205ms 5s205ms [ User: pubeu - Total duration: 5s205ms - Times executed: 1 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1369920' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-13 14:04:08 Duration: 5s205ms Database: ctddev51 User: pubeu Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 5s511ms 5s877ms 5s678ms 3 17s36ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 13 12 1 5s511ms 5s511ms 13 2 11s525ms 5s762ms [ User: pubeu - Total duration: 5s511ms - Times executed: 1 ]
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 13:49:54 Duration: 5s877ms Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 13:49:50 Duration: 5s648ms Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1369920') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-01-13 12:11:05 Duration: 5s511ms Database: ctddev51 User: pubeu Bind query: yes
2 5s205ms 5s205ms 5s205ms 1 5s205ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 13 14 1 5s205ms 5s205ms [ User: pubeu - Total duration: 5s205ms - Times executed: 1 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1369920' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-13 14:04:08 Duration: 5s205ms Database: ctddev51 User: pubeu Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
-
Events
Log levels
Key values
- 358 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 10 ERROR entries
- 2 WARNING entries
- 6 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 4 Max number of times the same event was reported
- 18 Total events found
Rank Times reported Error 1 4 ERROR: permission denied for table ...
Times Reported Most Frequent Error / Event #1
Day Hour Count Jan 13 17 4 - ERROR: permission denied for table chem_conc
- ERROR: permission denied for table chem_conc
- ERROR: permission denied for table chem_conc
Statement: select * from load.chem_conc
Date: 2026-01-13 17:07:33
Statement: select * from chem_conc
Date: 2026-01-13 17:07:46
Statement: grant all on chem_conc to edit
Date: 2026-01-13 17:08:56
2 3 ERROR: could not open loader log file "...": Permission denied
Times Reported Most Frequent Error / Event #2
Day Hour Count Jan 13 14 1 16 2 - ERROR: could not open loader log file "/home/twiegers/testArea/load/ccc/c:\temp\ccc\output\cc_reference_curation.txt.log": Permission denied
Statement: SELECT * FROM pgbulkload.pg_bulkload($1)
Date: 2026-01-13 14:37:19 Database: ctddev51 Application: pg_bulkload User: load Remote:
3 3 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #3
Day Hour Count Jan 13 19 3 4 2 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #4
Day Hour Count Jan 13 14 1 16 1 5 1 WARNING: Maximum parse error count exceeded - 1 error(...) found in input file
Times Reported Most Frequent Error / Event #5
Day Hour Count Jan 13 16 1 6 1 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #6
Day Hour Count Jan 13 17 1 - ERROR: relation "cc_reference_curation" does not exist at character 17
Statement: select * from cc_reference_curation
Date: 2026-01-13 17:06:26 Database: ctddev51 Application: pgAdmin 4 - CONN:6684304 User: edit Remote:
7 1 ERROR: unexpected EOF within message length word
Times Reported Most Frequent Error / Event #7
Day Hour Count Jan 13 16 1 8 1 ERROR: must be superuser to use pg_bulkload
Times Reported Most Frequent Error / Event #8
Day Hour Count Jan 13 14 1 - ERROR: must be superuser to use pg_bulkload
Statement: SELECT * FROM pgbulkload.pg_bulkload($1)
Date: 2026-01-13 14:33:16 Database: ctddev51 Application: pg_bulkload User: edit Remote:
9 1 WARNING: Parse error Record 1: Input Record 1: Rejected - column 7. malformed range literal: "..."
Times Reported Most Frequent Error / Event #9
Day Hour Count Jan 13 16 1 10 1 ERROR: syntax error at end of input
Times Reported Most Frequent Error / Event #10
Day Hour Count Jan 13 17 1 - ERROR: syntax error at end of input at character 23
Statement: grant all on chem_conc
Date: 2026-01-13 17:08:41