pgBadger-
Global information
- Generated on Sun May 17 04:10:04 2026
- Log file: /project/archive/log/postgres/dbdev51/postgresql.log-20260516
- Parsed 23,142 log entries in 2s
- Log start from 2026-05-10 00:09:33 to 2026-05-16 23:50:57
-
Overview
Global Stats
- 32 Number of unique normalized queries
- 68 Number of queries
- 42m45s Total query duration
- 2026-05-11 13:53:45 First query
- 2026-05-14 13:28:04 Last query
- 1 queries/s at 2026-05-12 14:43:10 Query peak
- 42m45s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 42m45s Execute total duration
- 91 Number of events
- 14 Number of unique normalized events
- 29 Max number of times the same event was reported
- 0 Number of cancellation
- 0 Total number of automatic vacuums
- 2 Total number of automatic analyzes
- 12 Number temporary file
- 11.30 GiB Max size of temporary file
- 964.39 MiB Average size of temporary file
- 2,801 Total number of sessions
- 22 sessions at 2026-05-12 15:22:37 Session peak
- 145d10h40m35s Total duration of sessions
- 1h14m46s Average duration of sessions
- 0 Average queries per session
- 915ms Average queries duration per session
- 1h14m45s Average idle time per session
- 2,801 Total number of connections
- 9 connections/s at 2026-05-15 13:33:19 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-12 14:43:10 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-12 14:43:10 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-14 13:28:04 Date
Queries duration
Key values
- 42m45s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 10 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms May 11 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 1 0ms 47s724ms 47s724ms 0ms 47s724ms 47s724ms 14 13 0ms 2m40s 34s458ms 46s545ms 46s559ms 2m40s 15 14 0ms 24s37ms 14s304ms 23s136ms 1m3s 1m3s 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms May 12 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 4 0ms 51s973ms 44s691ms 49s923ms 51s973ms 51s973ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 7 0ms 17s79ms 13s138ms 17s79ms 22s827ms 22s827ms 15 3 0ms 17s223ms 16s421ms 17s112ms 17s223ms 17s223ms 16 4 0ms 39s406ms 31s928ms 1m3s 1m3s 1m3s 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms May 13 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 1 0ms 24s232ms 24s232ms 24s232ms 24s232ms 24s232ms 12 8 0ms 1m44s 42s974ms 1m38s 1m44s 1m44s 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 6 0ms 3m4s 1m42s 3m1s 3m4s 3m4s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms May 14 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 1 0ms 23s61ms 23s61ms 23s61ms 23s61ms 23s61ms 13 6 0ms 3m21s 1m8s 52s799ms 3m21s 3m21s 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms May 15 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms May 16 00 0 0ms 0ms 0ms 0ms 0ms 0ms 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 0 0ms 0ms 0ms 0ms 0ms 0ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 10 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms May 11 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 1 0 47s724ms 0ms 0ms 47s724ms 14 9 0 18s658ms 12s253ms 23s592ms 46s559ms 15 12 0 12s699ms 15s465ms 22s775ms 23s136ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms May 12 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 3 0 42s948ms 36s999ms 39s871ms 51s973ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 7 0 13s138ms 16s947ms 17s79ms 22s827ms 15 3 0 16s421ms 0ms 17s112ms 17s223ms 16 2 0 38s975ms 38s543ms 39s406ms 39s406ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms May 13 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 3 0 52s888ms 18s263ms 35s766ms 1m44s 13 0 0 0ms 0ms 0ms 0ms 14 5 0 1m33s 58s659ms 3m1s 3m4s 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms May 14 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms May 15 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms May 16 00 0 0 0ms 0ms 0ms 0ms 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 10 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms May 11 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms May 12 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms May 13 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms May 14 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms May 15 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms May 16 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare May 10 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% May 11 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 7 7.00 0.00% 15 0 6 6.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% May 12 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 7 7.00 0.00% 15 0 2 2.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% May 13 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 3 3.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% May 14 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% May 15 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% May 16 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 0 0.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second May 10 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 16 0.00/s 08 16 0.00/s 09 16 0.00/s 10 16 0.00/s 11 16 0.00/s 12 16 0.00/s 13 15 0.00/s 14 16 0.00/s 15 9 0.00/s 16 16 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s May 11 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 16 0.00/s 08 16 0.00/s 09 16 0.00/s 10 16 0.00/s 11 16 0.00/s 12 15 0.00/s 13 23 0.01/s 14 13 0.00/s 15 16 0.00/s 16 16 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s May 12 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 16 0.00/s 08 16 0.00/s 09 16 0.00/s 10 31 0.01/s 11 15 0.00/s 12 16 0.00/s 13 9 0.00/s 14 16 0.00/s 15 22 0.01/s 16 17 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s May 13 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 16 0.00/s 08 16 0.00/s 09 16 0.00/s 10 15 0.00/s 11 21 0.01/s 12 10 0.00/s 13 17 0.00/s 14 16 0.00/s 15 16 0.00/s 16 16 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s May 14 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 16 0.00/s 08 16 0.00/s 09 15 0.00/s 10 16 0.00/s 11 9 0.00/s 12 20 0.01/s 13 16 0.00/s 14 16 0.00/s 15 16 0.00/s 16 16 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s May 15 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 16 0.00/s 08 15 0.00/s 09 16 0.00/s 10 15 0.00/s 11 44 0.01/s 12 20 0.01/s 13 88 0.02/s 14 31 0.01/s 15 16 0.00/s 16 16 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s May 16 00 16 0.00/s 01 16 0.00/s 02 16 0.00/s 03 16 0.00/s 04 16 0.00/s 05 16 0.00/s 06 16 0.00/s 07 15 0.00/s 08 16 0.00/s 09 9 0.00/s 10 16 0.00/s 11 16 0.00/s 12 16 0.00/s 13 16 0.00/s 14 16 0.00/s 15 16 0.00/s 16 16 0.00/s 17 16 0.00/s 18 16 0.00/s 19 16 0.00/s 20 16 0.00/s 21 16 0.00/s 22 16 0.00/s 23 16 0.00/s Day Hour Count Average Duration Average idle time May 10 00 16 30m41s 30m41s 01 16 30m41s 30m41s 02 16 30m37s 30m37s 03 16 30m41s 30m41s 04 16 30m41s 30m41s 05 16 30m37s 30m37s 06 16 30m41s 30m41s 07 16 30m41s 30m41s 08 16 30m37s 30m37s 09 16 30m41s 30m41s 10 16 30m41s 30m41s 11 16 30m37s 30m37s 12 16 30m41s 30m41s 13 15 30m40s 30m40s 14 16 30m39s 30m39s 15 9 30m43s 30m43s 16 16 30m37s 30m37s 17 16 30m41s 30m41s 18 16 30m41s 30m41s 19 16 30m37s 30m37s 20 16 30m41s 30m41s 21 16 30m41s 30m41s 22 16 30m37s 30m37s 23 16 30m41s 30m41s May 11 00 16 30m41s 30m41s 01 16 30m37s 30m37s 02 16 30m41s 30m41s 03 16 30m41s 30m41s 04 16 30m37s 30m37s 05 16 30m41s 30m41s 06 16 30m41s 30m41s 07 16 30m37s 30m37s 08 16 30m41s 30m41s 09 16 30m41s 30m41s 10 16 30m37s 30m37s 11 16 30m41s 30m41s 12 15 30m40s 30m40s 13 19 25m54s 25m51s 14 11 25m14s 24m34s 15 16 30m37s 30m25s 16 21 53m48s 53m48s 17 16 30m41s 30m41s 18 17 43m51s 43m51s 19 16 30m41s 30m41s 20 16 30m41s 30m41s 21 16 30m37s 30m37s 22 16 30m41s 30m41s 23 16 30m41s 30m41s May 12 00 16 30m37s 30m37s 01 16 30m41s 30m41s 02 16 30m41s 30m41s 03 16 30m37s 30m37s 04 16 30m41s 30m41s 05 16 30m41s 30m41s 06 16 30m37s 30m37s 07 16 30m41s 30m41s 08 16 30m41s 30m41s 09 16 30m37s 30m37s 10 18 27m16s 27m6s 11 15 30m40s 30m40s 12 16 30m39s 30m39s 13 9 30m43s 30m43s 14 16 30m37s 30m31s 15 16 30m41s 30m38s 16 23 42m50s 42m44s 17 17 54m40s 54m40s 18 20 2h4m40s 2h4m40s 19 16 30m41s 30m41s 20 16 30m37s 30m37s 21 16 30m41s 30m41s 22 16 30m41s 30m41s 23 16 30m37s 30m37s May 13 00 16 30m41s 30m41s 01 16 30m41s 30m41s 02 16 30m37s 30m37s 03 16 30m41s 30m41s 04 16 30m41s 30m41s 05 16 30m37s 30m37s 06 16 30m41s 30m41s 07 16 30m41s 30m41s 08 16 30m37s 30m37s 09 16 30m41s 30m41s 10 15 30m40s 30m40s 11 16 30m39s 30m37s 12 11 25m32s 25m1s 13 17 28m49s 28m49s 14 20 59m25s 58m54s 15 16 30m41s 30m41s 16 16 30m37s 30m37s 17 16 30m41s 30m41s 18 16 30m41s 30m41s 19 16 30m37s 30m37s 20 16 30m41s 30m41s 21 16 30m41s 30m41s 22 16 30m37s 30m37s 23 16 30m41s 30m41s May 14 00 16 30m41s 30m41s 01 16 30m37s 30m37s 02 16 30m41s 30m41s 03 16 30m41s 30m41s 04 16 30m37s 30m37s 05 16 30m41s 30m41s 06 16 30m41s 30m41s 07 16 30m37s 30m37s 08 16 30m41s 30m41s 09 15 30m40s 30m40s 10 16 30m39s 30m39s 11 9 30m43s 30m43s 12 16 30m37s 30m36s 13 16 30m41s 30m15s 14 16 30m41s 30m41s 15 20 1h3m48s 1h3m48s 16 16 30m41s 30m41s 17 16 30m41s 30m41s 18 16 30m37s 30m37s 19 16 30m41s 30m41s 20 16 30m41s 30m41s 21 16 30m37s 30m37s 22 16 30m41s 30m41s 23 16 30m41s 30m41s May 15 00 16 30m37s 30m37s 01 16 30m41s 30m41s 02 16 30m41s 30m41s 03 16 30m37s 30m37s 04 16 30m41s 30m41s 05 16 30m41s 30m41s 06 16 30m37s 30m37s 07 16 30m41s 30m41s 08 15 30m40s 30m40s 09 16 30m39s 30m39s 10 10 27m39s 27m39s 11 44 1d7h8m31s 1d7h8m31s 12 20 29m5s 29m5s 13 88 13m47s 13m47s 14 31 26m54s 26m54s 15 16 30m41s 30m41s 16 16 30m41s 30m41s 17 24 1d2h43m59s 1d2h43m59s 18 21 2h23m1s 2h23m1s 19 16 30m41s 30m41s 20 16 30m37s 30m37s 21 16 30m41s 30m41s 22 16 30m41s 30m41s 23 16 30m37s 30m37s May 16 00 16 30m41s 30m41s 01 16 30m41s 30m41s 02 16 30m37s 30m37s 03 16 30m41s 30m41s 04 16 30m41s 30m41s 05 16 30m37s 30m37s 06 16 30m41s 30m41s 07 15 30m40s 30m40s 08 16 30m39s 30m39s 09 9 30m43s 30m43s 10 16 30m37s 30m37s 11 16 30m41s 30m41s 12 16 30m41s 30m41s 13 16 30m37s 30m37s 14 16 30m41s 30m41s 15 16 30m41s 30m41s 16 16 30m37s 30m37s 17 16 30m41s 30m41s 18 16 30m41s 30m41s 19 16 30m37s 30m37s 20 16 30m41s 30m41s 21 16 30m41s 30m41s 22 16 30m37s 30m37s 23 16 30m41s 30m41s -
Connections
Established Connections
Key values
- 9 connections Connection Peak
- 2026-05-15 13:33:19 Date
Connections per database
Key values
- ctddev51 Main Database
- 2,801 connections Total
Connections per user
Key values
- editeu Main User
- 2,801 connections Total
-
Sessions
Simultaneous sessions
Key values
- 22 sessions Session Peak
- 2026-05-12 15:22:37 Date
Histogram of session times
Key values
- 2,650 1800000-3600000ms duration
Sessions per database
Key values
- ctddev51 Main Database
- 2,801 sessions Total
Sessions per user
Key values
- editeu Main User
- 2,801 sessions Total
Sessions per host
Key values
- 10.12.5.47 Main Host
- 2,801 sessions Total
Sessions per application
Key values
- unknown Main Application
- 2,801 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 29,629 buffers Checkpoint Peak
- 2026-05-15 12:36:59 Date
- 1619.137 seconds Highest write time
- 0.002 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-05-15 11:40:03 Date
Checkpoints distance
Key values
- 595.40 Mo Distance Peak
- 2026-05-15 12:36:59 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time May 10 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s May 11 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 499 50.153s 0.002s 50.173s 15 74 7.579s 0.002s 7.611s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s May 12 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 345 34.786s 0.001s 34.804s 15 81 8.283s 0.002s 8.315s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s May 13 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 333 33.519s 0.002s 33.55s 15 0 0s 0s 0s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s May 14 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 383 38.52s 0.002s 38.539s 17 26 2.711s 0.001s 2.727s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s May 15 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 4,005 400.983s 0.002s 401.06s 10 52 5.409s 0.003s 5.455s 11 42 4.286s 0.001s 4.301s 12 29,629 1,619.137s 0.002s 1,619.226s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s May 16 00 0 0s 0s 0s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 0 0s 0s 0s 17 0 0s 0s 0s 18 0 0s 0s 0s 19 0 0s 0s 0s 20 0 0s 0s 0s 21 0 0s 0s 0s 22 0 0s 0s 0s 23 0 0s 0s 0s Day Hour Added Removed Recycled Synced files Longest sync Average sync May 10 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s May 11 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 8 0.001s 0.001s 15 0 0 0 17 0.001s 0.002s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s May 12 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 8 0.001s 0.001s 15 0 0 0 16 0.001s 0.002s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s May 13 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 8 0.001s 0.001s 15 0 0 0 0 0s 0s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s May 14 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 0 8 0.001s 0.001s 17 0 0 0 7 0.001s 0.001s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s May 15 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 3 0 18 0.001s 0.001s 10 0 0 0 16 0.002s 0.002s 11 0 0 0 9 0.001s 0.001s 12 0 18 0 26 0.001s 0.001s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s May 16 00 0 0 0 0 0s 0s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 0 0 0s 0s 17 0 0 0 0 0s 0s 18 0 0 0 0 0s 0s 19 0 0 0 0 0s 0s 20 0 0 0 0 0s 0s 21 0 0 0 0 0s 0s 22 0 0 0 0 0s 0s 23 0 0 0 0 0s 0s Day Hour Count Avg time (sec) May 10 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s May 11 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s May 12 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s May 13 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s May 14 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s May 15 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s May 16 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate May 10 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB May 11 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 33.00 kB 112.00 kB 15 27.50 kB 100.50 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB May 12 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 40.00 kB 90.00 kB 15 32.00 kB 81.50 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB May 13 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 43.00 kB 76.00 kB 15 0.00 kB 0.00 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB May 14 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 45.00 kB 73.00 kB 17 25.00 kB 68.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB May 15 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 38,852.00 kB 38,852.00 kB 10 29.00 kB 33,222.50 kB 11 30.00 kB 28,331.00 kB 12 304,843.00 kB 304,843.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB May 16 00 0.00 kB 0.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 0.00 kB 0.00 kB 17 0.00 kB 0.00 kB 18 0.00 kB 0.00 kB 19 0.00 kB 0.00 kB 20 0.00 kB 0.00 kB 21 0.00 kB 0.00 kB 22 0.00 kB 0.00 kB 23 0.00 kB 0.00 kB -
Temporary Files
Size of temporary files
Key values
- 10.00 GiB Temp Files size Peak
- 2026-05-14 13:37:26 Date
Number of temporary files
Key values
- 10 per second Temp Files Peak
- 2026-05-14 13:37:26 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size May 10 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 May 11 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 May 12 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 May 13 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 May 14 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 12 11.30 GiB 964.39 MiB 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 May 15 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 May 16 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0 sec Highest CPU-cost vacuum
Table
Database - Date
- 0 sec Highest CPU-cost analyze
Table
Database - Date
Average Autovacuum Duration
Key values
- 0 sec Highest CPU-cost vacuum
Table
Database - Date
Analyzes per table
Key values
- pub1.term_set_enrichment (1) Main table analyzed (database ctddev51)
- 2 analyzes Total
Vacuums per table
Key values
- unknown (0) Main table vacuumed on database
- 0 vacuums Total
Tuples removed per table
Key values
- unknown (0) Main table with removed tuples on database
- 0 tuples Total removed
Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs May 10 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 May 11 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 May 12 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 May 13 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 May 14 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 May 15 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 2 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 May 16 00 0 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 - 0 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 45 Total read queries
- 20 Total write queries
Queries by database
Key values
- unknown Main database
- 59 Requests
- 32m43s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 59 Requests
User Request type Count Duration pub1 Total 4 2m58s cte 1 49s923ms select 3 2m8s pubeu Total 5 7m3s cte 1 23s61ms others 1 3m21s select 3 3m18s unknown Total 59 32m43s cte 18 14m12s others 2 1m37s select 39 16m52s Duration by user
Key values
- 32m43s (unknown) Main time consuming user
User Request type Count Duration pub1 Total 4 2m58s cte 1 49s923ms select 3 2m8s pubeu Total 5 7m3s cte 1 23s61ms others 1 3m21s select 3 3m18s unknown Total 59 32m43s cte 18 14m12s others 2 1m37s select 39 16m52s Queries by host
Key values
- unknown Main host
- 68 Requests
- 42m45s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 59 Requests
- 32m43s (unknown)
- Main time consuming application
Application Request type Count Duration pgAdmin 4 - CONN:4037727 Total 1 49s923ms cte 1 49s923ms pgAdmin 4 - CONN:4939229 Total 1 51s973ms select 1 51s973ms pgAdmin 4 - CONN:5065507 Total 1 1m44s select 1 1m44s pgAdmin 4 - CONN:6182870 Total 1 36s999ms select 1 36s999ms pgAdmin 4 - CONN:6353290 Total 2 1m34s select 2 1m34s pgAdmin 4 - CONN:7238277 Total 1 39s871ms select 1 39s871ms pgAdmin 4 - CONN:7282291 Total 1 3m21s others 1 3m21s pgAdmin 4 - CONN:7474459 Total 1 23s61ms cte 1 23s61ms unknown Total 59 32m43s cte 18 14m12s others 2 1m37s select 39 16m52s Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-05-16 06:58:54 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 60 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 3m21s explain analyze SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-14 13:13:06 - Database: ctddev51 - User: pubeu - Application: pgAdmin 4 - CONN:7282291 ]
2 3m4s SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-13 14:42:43 ]
3 3m1s SELECT /* BatchChemGODAO */ 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-13 14:39:43 - Bind query: yes ]
4 2m40s WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" FROM ( SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", -- sort-only columns sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false) x ORDER BY chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;[ Date: 2026-05-11 14:00:31 ]
5 2m31s WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431 ), sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM descendant_terms dt JOIN term c ON c.id = dt.descendant_object_id JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id ) SELECT DISTINCT 'D019216' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;[ Date: 2026-05-13 14:48:08 ]
6 1m44s SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 673695) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;[ Date: 2026-05-13 12:04:52 - Database: ctddev51 - User: pubeu - Application: pgAdmin 4 - CONN:5065507 ]
7 1m38s WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 673695 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;[ Date: 2026-05-13 12:06:38 ]
8 52s799ms explain ( analyze, buffers, verbose, settings, wal ) SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-14 13:14:15 ]
9 51s973ms SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-12 10:25:39 - Database: ctddev51 - User: pub1 - Application: pgAdmin 4 - CONN:4939229 ]
10 49s923ms WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;[ Date: 2026-05-12 10:24:14 - Database: ctddev51 - User: pub1 - Application: pgAdmin 4 - CONN:4037727 ]
11 47s724ms SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-11 13:53:45 - Database: ctddev51 - User: pubeu - Application: pgAdmin 4 - CONN:6353290 ]
12 46s895ms SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-13 14:33:11 ]
13 46s559ms SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-11 14:04:44 - Database: ctddev51 - User: pubeu - Application: pgAdmin 4 - CONN:6353290 ]
14 46s545ms SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-11 14:09:22 ]
15 44s598ms explain ( analyze, buffers, verbose, settings, wal ) WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;[ Date: 2026-05-14 13:20:32 ]
16 41s269ms SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;[ Date: 2026-05-13 14:32:50 - Bind query: yes ]
17 40s246ms WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;[ Date: 2026-05-11 14:02:34 ]
18 40s42ms WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;[ Date: 2026-05-11 14:10:14 ]
19 39s871ms SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;[ Date: 2026-05-12 10:31:33 - Database: ctddev51 - User: pub1 - Application: pgAdmin 4 - CONN:7238277 ]
20 39s439ms WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;[ Date: 2026-05-14 13:26:12 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 3m59s 5 46s545ms 51s973ms 47s939ms select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.acc_txt = ? ) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 11 13 1 47s724ms 47s724ms 14 2 1m33s 46s552ms May 12 10 1 51s973ms 51s973ms May 13 14 1 46s895ms 46s895ms [ User: pubeu - Total duration: 1m34s - Times executed: 2 ]
[ User: pub1 - Total duration: 51s973ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:6353290 - Total duration: 1m34s - Times executed: 2 ]
[ Application: pgAdmin 4 - CONN:4939229 - Total duration: 51s973ms - Times executed: 1 ]
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 10:25:39 Duration: 51s973ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:4939229
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 13:53:45 Duration: 47s724ms Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:6353290
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:33:11 Duration: 46s895ms
2 3m56s 5 18s263ms 1m44s 47s323ms select associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where taxonterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 12 16 2 1m17s 38s975ms May 13 12 3 2m38s 52s888ms [ User: pubeu - Total duration: 1m44s - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:5065507 - Total duration: 1m44s - Times executed: 1 ]
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 673695) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-13 12:04:52 Duration: 1m44s Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:5065507
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 16:01:02 Duration: 39s406ms
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 16:12:43 Duration: 38s543ms
3 3m21s 1 3m21s 3m21s 3m21s explain analyze select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 14 13 1 3m21s 3m21s [ User: pubeu - Total duration: 3m21s - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7282291 - Total duration: 3m21s - Times executed: 1 ]
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explain analyze SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-14 13:13:06 Duration: 3m21s Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:7282291
4 3m4s 1 3m4s 3m4s 3m4s select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 13 14 1 3m4s 3m4s -
SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:42:43 Duration: 3m4s
5 3m1s 1 3m1s 3m1s 3m1s select 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 13 14 1 3m1s 3m1s -
SELECT /* BatchChemGODAO */ 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:39:43 Duration: 3m1s Bind query: yes
6 2m49s 4 39s263ms 49s923ms 42s369ms with sq as materialized ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 11 14 3 1m59s 39s850ms May 12 10 1 49s923ms 49s923ms [ User: pub1 - Total duration: 49s923ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:4037727 - Total duration: 49s923ms - Times executed: 1 ]
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-12 10:24:14 Duration: 49s923ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:4037727
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-11 14:02:34 Duration: 40s246ms
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-11 14:10:14 Duration: 40s42ms
7 2m42s 4 16s655ms 1m38s 40s610ms with descendant_terms as ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), filtered_ptr as ( select ptr.* from phenotype_term_reference ptr join descendant_terms dt on ptr.taxon_id = dt.descendant_object_id ) select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from filtered_ptr ptr join phenotype_term pt on pt.term_id = ptr.term_id and pt.phenotype_id = ptr.phenotype_id join term associatedterm on associatedterm.id = ptr.term_id join term phenotypeterm on phenotypeterm.id = ptr.phenotype_id left join term taxonterm on taxonterm.id = ptr.taxon_id join reference r on r.id = ptr.reference_id join ixn i on i.id = ptr.ixn_id join object_type o on o.id = associatedterm.object_type_id left join ixn_anatomy ia on ia.ixn_id = ptr.ixn_id left join term anatomyterm on anatomyterm.id = ia.anatomy_id group by associatedterm, associatedtermnmsort, phenotype, casrn, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedterm.id, phenotypeterm.id, pt.indirect_term_qty;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 13 12 4 2m42s 40s610ms -
WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 673695 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:06:38 Duration: 1m38s
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WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:00:03 Duration: 24s735ms
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WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:00:50 Duration: 22s654ms
8 2m40s 1 2m40s 2m40s 2m40s with sq as ( select c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" from ( select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false) x order by chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 11 14 1 2m40s 2m40s -
WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" FROM ( SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", -- sort-only columns sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false) x ORDER BY chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;
Date: 2026-05-11 14:00:31 Duration: 2m40s
9 2m31s 1 2m31s 2m31s 2m31s with descendant_terms as ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from descendant_terms dt join term c on c.id = dt.descendant_object_id join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 13 14 1 2m31s 2m31s -
WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431 ), sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM descendant_terms dt JOIN term c ON c.id = dt.descendant_object_id JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id ) SELECT DISTINCT 'D019216' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-13 14:48:08 Duration: 2m31s
10 1m57s 6 14s458ms 39s871ms 19s511ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm_sort, "DirectEvidence", c.nm;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 11 15 5 1m17s 15s439ms May 12 10 1 39s871ms 39s871ms [ User: pub1 - Total duration: 39s871ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7238277 - Total duration: 39s871ms - Times executed: 1 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-12 10:31:33 Duration: 39s871ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:7238277
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-11 15:12:51 Duration: 16s613ms
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-11 15:15:50 Duration: 15s465ms
11 1m15s 2 37s505ms 37s547ms 37s526ms with sq as ( select c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? group by c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) select ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id and gga.is_not = false join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id group by sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 14 13 2 1m15s 37s526ms -
WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' GROUP BY c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) SELECT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id AND gga.is_not = false JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id GROUP BY sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:27:12 Duration: 37s547ms
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WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' GROUP BY c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) SELECT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id AND gga.is_not = false JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id GROUP BY sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:28:04 Duration: 37s505ms
12 1m12s 3 23s61ms 25s262ms 24s275ms with descendant_terms as materialized ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), filtered_ptr as materialized ( select ptr.* from phenotype_term_reference ptr join descendant_terms dt on ptr.taxon_id = dt.descendant_object_id ) select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from filtered_ptr ptr join phenotype_term pt on pt.term_id = ptr.term_id and pt.phenotype_id = ptr.phenotype_id join term associatedterm on associatedterm.id = ptr.term_id join term phenotypeterm on phenotypeterm.id = ptr.phenotype_id left join term taxonterm on taxonterm.id = ptr.taxon_id join reference r on r.id = ptr.reference_id join ixn i on i.id = ptr.ixn_id join object_type o on o.id = associatedterm.object_type_id left join ixn_anatomy ia on ia.ixn_id = ptr.ixn_id left join term anatomyterm on anatomyterm.id = ia.anatomy_id group by associatedterm, associatedtermnmsort, phenotype, casrn, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedterm.id, phenotypeterm.id, pt.indirect_term_qty;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 12 16 2 49s763ms 24s881ms May 14 12 1 23s61ms 23s61ms [ User: pubeu - Total duration: 23s61ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7474459 - Total duration: 23s61ms - Times executed: 1 ]
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-- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:05:39 Duration: 25s262ms
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-- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:12:00 Duration: 24s501ms
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WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-14 12:38:25 Duration: 23s61ms Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:7474459
13 1m10s 6 11s459ms 12s253ms 11s691ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 11 14 1 12s253ms 12s253ms 15 4 46s139ms 11s534ms May 12 14 1 11s754ms 11s754ms -
SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-11 14:41:21 Duration: 12s253ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-12 14:34:00 Duration: 11s754ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-11 15:04:36 Duration: 11s639ms Bind query: yes
14 1m8s 4 16s947ms 17s223ms 17s90ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort asc, pt.indirect_term_qty desc limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 12 14 2 34s27ms 17s13ms 15 2 34s336ms 17s168ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 15:34:26 Duration: 17s223ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 15:20:59 Duration: 17s112ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 14:58:22 Duration: 17s79ms Bind query: yes
15 52s799ms 1 52s799ms 52s799ms 52s799ms explain ( analyze, buffers, verbose, settings, wal ) select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.acc_txt = ? ) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 14 13 1 52s799ms 52s799ms -
explain ( analyze, buffers, verbose, settings, wal ) SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-14 13:14:15 Duration: 52s799ms
16 50s999ms 2 14s 36s999ms 25s499ms select ? AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ? || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", case when gdr.via_chem_id is null then de.direct_evidence else null end AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) AS "OmimIDs", string_agg(distinct r.acc_txt, ?) AS "PubMedIDs" from gene_disease_reference gdr join term g on g.id = gdr.gene_id join term d on d.id = gdr.disease_id left join reference r on r.id = gdr.reference_id left join term c on c.id = gdr.via_chem_id left join lateral ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) as disease_categories from slim_term_mapping stm where stm.mapped_term_id = d.id) dc on true left join lateral ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) as direct_evidence from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) de on gdr.via_chem_id is null where gdr.disease_id = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score order by g.nm, d.nm_sort, de.direct_evidence, c.nm;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 11 15 1 14s 14s May 12 10 1 36s999ms 36s999ms [ User: pub1 - Total duration: 36s999ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:6182870 - Total duration: 36s999ms - Times executed: 1 ]
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SELECT 'd003866' AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ':' || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN de.direct_evidence ELSE NULL END AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) AS "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') AS "PubMedIDs" FROM gene_disease_reference gdr JOIN term g ON g.id = gdr.gene_id JOIN term d ON d.id = gdr.disease_id LEFT JOIN reference r ON r.id = gdr.reference_id LEFT JOIN term c ON c.id = gdr.via_chem_id LEFT JOIN LATERAL ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) AS disease_categories FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) dc ON TRUE LEFT JOIN LATERAL ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) AS direct_evidence FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) de ON gdr.via_chem_id IS NULL WHERE gdr.disease_id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score ORDER BY g.nm, d.nm_sort, de.direct_evidence, c.nm;
Date: 2026-05-12 10:32:49 Duration: 36s999ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:6182870
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SELECT 'd003866' AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ':' || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN de.direct_evidence ELSE NULL END AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) AS "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') AS "PubMedIDs" FROM gene_disease_reference gdr JOIN term g ON g.id = gdr.gene_id JOIN term d ON d.id = gdr.disease_id LEFT JOIN reference r ON r.id = gdr.reference_id LEFT JOIN term c ON c.id = gdr.via_chem_id LEFT JOIN LATERAL ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) AS disease_categories FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) dc ON TRUE LEFT JOIN LATERAL ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) AS direct_evidence FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) de ON gdr.via_chem_id IS NULL WHERE gdr.disease_id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score ORDER BY g.nm, d.nm_sort, de.direct_evidence, c.nm;
Date: 2026-05-11 15:16:51 Duration: 14s
17 44s598ms 1 44s598ms 44s598ms 44s598ms explain ( analyze, buffers, verbose, settings, wal ) with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 14 13 1 44s598ms 44s598ms -
explain ( analyze, buffers, verbose, settings, wal ) WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:20:32 Duration: 44s598ms
18 41s269ms 1 41s269ms 41s269ms 41s269ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 13 14 1 41s269ms 41s269ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:32:50 Duration: 41s269ms Bind query: yes
19 39s439ms 1 39s439ms 39s439ms 39s439ms with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 14 13 1 39s439ms 39s439ms -
WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:26:12 Duration: 39s439ms
20 32s195ms 2 16s82ms 16s113ms 16s97ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 11 14 1 16s113ms 16s113ms May 12 14 1 16s82ms 16s82ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 14:40:38 Duration: 16s113ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 14:31:06 Duration: 16s82ms Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 6 1m57s 14s458ms 39s871ms 19s511ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm_sort, "DirectEvidence", c.nm;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 11 15 5 1m17s 15s439ms May 12 10 1 39s871ms 39s871ms [ User: pub1 - Total duration: 39s871ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7238277 - Total duration: 39s871ms - Times executed: 1 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-12 10:31:33 Duration: 39s871ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:7238277
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-11 15:12:51 Duration: 16s613ms
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-11 15:15:50 Duration: 15s465ms
2 6 1m10s 11s459ms 12s253ms 11s691ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 11 14 1 12s253ms 12s253ms 15 4 46s139ms 11s534ms May 12 14 1 11s754ms 11s754ms -
SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-11 14:41:21 Duration: 12s253ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-12 14:34:00 Duration: 11s754ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-11 15:04:36 Duration: 11s639ms Bind query: yes
3 5 3m59s 46s545ms 51s973ms 47s939ms select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.acc_txt = ? ) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 11 13 1 47s724ms 47s724ms 14 2 1m33s 46s552ms May 12 10 1 51s973ms 51s973ms May 13 14 1 46s895ms 46s895ms [ User: pubeu - Total duration: 1m34s - Times executed: 2 ]
[ User: pub1 - Total duration: 51s973ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:6353290 - Total duration: 1m34s - Times executed: 2 ]
[ Application: pgAdmin 4 - CONN:4939229 - Total duration: 51s973ms - Times executed: 1 ]
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 10:25:39 Duration: 51s973ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:4939229
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 13:53:45 Duration: 47s724ms Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:6353290
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:33:11 Duration: 46s895ms
4 5 3m56s 18s263ms 1m44s 47s323ms select associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where taxonterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 12 16 2 1m17s 38s975ms May 13 12 3 2m38s 52s888ms [ User: pubeu - Total duration: 1m44s - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:5065507 - Total duration: 1m44s - Times executed: 1 ]
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 673695) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-13 12:04:52 Duration: 1m44s Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:5065507
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 16:01:02 Duration: 39s406ms
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 16:12:43 Duration: 38s543ms
5 4 2m49s 39s263ms 49s923ms 42s369ms with sq as materialized ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 11 14 3 1m59s 39s850ms May 12 10 1 49s923ms 49s923ms [ User: pub1 - Total duration: 49s923ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:4037727 - Total duration: 49s923ms - Times executed: 1 ]
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-12 10:24:14 Duration: 49s923ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:4037727
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-11 14:02:34 Duration: 40s246ms
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-11 14:10:14 Duration: 40s42ms
6 4 2m42s 16s655ms 1m38s 40s610ms with descendant_terms as ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), filtered_ptr as ( select ptr.* from phenotype_term_reference ptr join descendant_terms dt on ptr.taxon_id = dt.descendant_object_id ) select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from filtered_ptr ptr join phenotype_term pt on pt.term_id = ptr.term_id and pt.phenotype_id = ptr.phenotype_id join term associatedterm on associatedterm.id = ptr.term_id join term phenotypeterm on phenotypeterm.id = ptr.phenotype_id left join term taxonterm on taxonterm.id = ptr.taxon_id join reference r on r.id = ptr.reference_id join ixn i on i.id = ptr.ixn_id join object_type o on o.id = associatedterm.object_type_id left join ixn_anatomy ia on ia.ixn_id = ptr.ixn_id left join term anatomyterm on anatomyterm.id = ia.anatomy_id group by associatedterm, associatedtermnmsort, phenotype, casrn, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedterm.id, phenotypeterm.id, pt.indirect_term_qty;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 13 12 4 2m42s 40s610ms -
WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 673695 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:06:38 Duration: 1m38s
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WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:00:03 Duration: 24s735ms
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WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:00:50 Duration: 22s654ms
7 4 1m8s 16s947ms 17s223ms 17s90ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort asc, pt.indirect_term_qty desc limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 12 14 2 34s27ms 17s13ms 15 2 34s336ms 17s168ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 15:34:26 Duration: 17s223ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 15:20:59 Duration: 17s112ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 14:58:22 Duration: 17s79ms Bind query: yes
8 3 1m12s 23s61ms 25s262ms 24s275ms with descendant_terms as materialized ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), filtered_ptr as materialized ( select ptr.* from phenotype_term_reference ptr join descendant_terms dt on ptr.taxon_id = dt.descendant_object_id ) select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from filtered_ptr ptr join phenotype_term pt on pt.term_id = ptr.term_id and pt.phenotype_id = ptr.phenotype_id join term associatedterm on associatedterm.id = ptr.term_id join term phenotypeterm on phenotypeterm.id = ptr.phenotype_id left join term taxonterm on taxonterm.id = ptr.taxon_id join reference r on r.id = ptr.reference_id join ixn i on i.id = ptr.ixn_id join object_type o on o.id = associatedterm.object_type_id left join ixn_anatomy ia on ia.ixn_id = ptr.ixn_id left join term anatomyterm on anatomyterm.id = ia.anatomy_id group by associatedterm, associatedtermnmsort, phenotype, casrn, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedterm.id, phenotypeterm.id, pt.indirect_term_qty;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 12 16 2 49s763ms 24s881ms May 14 12 1 23s61ms 23s61ms [ User: pubeu - Total duration: 23s61ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7474459 - Total duration: 23s61ms - Times executed: 1 ]
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-- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:05:39 Duration: 25s262ms
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-- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:12:00 Duration: 24s501ms
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WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-14 12:38:25 Duration: 23s61ms Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:7474459
9 3 22s201ms 7s281ms 7s487ms 7s400ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort asc, pt.indirect_term_qty desc limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 11 14 1 7s487ms 7s487ms May 12 14 2 14s714ms 7s357ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'VALPROIC ACID' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-11 14:11:07 Duration: 7s487ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'VALPROIC ACID' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 14:30:30 Duration: 7s432ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'VALPROIC ACID' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 14:43:10 Duration: 7s281ms Bind query: yes
10 2 1m15s 37s505ms 37s547ms 37s526ms with sq as ( select c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? group by c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) select ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id and gga.is_not = false join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id group by sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 14 13 2 1m15s 37s526ms -
WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' GROUP BY c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) SELECT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id AND gga.is_not = false JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id GROUP BY sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:27:12 Duration: 37s547ms
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WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' GROUP BY c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) SELECT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id AND gga.is_not = false JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id GROUP BY sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:28:04 Duration: 37s505ms
11 2 50s999ms 14s 36s999ms 25s499ms select ? AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ? || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", case when gdr.via_chem_id is null then de.direct_evidence else null end AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) AS "OmimIDs", string_agg(distinct r.acc_txt, ?) AS "PubMedIDs" from gene_disease_reference gdr join term g on g.id = gdr.gene_id join term d on d.id = gdr.disease_id left join reference r on r.id = gdr.reference_id left join term c on c.id = gdr.via_chem_id left join lateral ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) as disease_categories from slim_term_mapping stm where stm.mapped_term_id = d.id) dc on true left join lateral ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) as direct_evidence from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) de on gdr.via_chem_id is null where gdr.disease_id = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score order by g.nm, d.nm_sort, de.direct_evidence, c.nm;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 11 15 1 14s 14s May 12 10 1 36s999ms 36s999ms [ User: pub1 - Total duration: 36s999ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:6182870 - Total duration: 36s999ms - Times executed: 1 ]
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SELECT 'd003866' AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ':' || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN de.direct_evidence ELSE NULL END AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) AS "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') AS "PubMedIDs" FROM gene_disease_reference gdr JOIN term g ON g.id = gdr.gene_id JOIN term d ON d.id = gdr.disease_id LEFT JOIN reference r ON r.id = gdr.reference_id LEFT JOIN term c ON c.id = gdr.via_chem_id LEFT JOIN LATERAL ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) AS disease_categories FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) dc ON TRUE LEFT JOIN LATERAL ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) AS direct_evidence FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) de ON gdr.via_chem_id IS NULL WHERE gdr.disease_id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score ORDER BY g.nm, d.nm_sort, de.direct_evidence, c.nm;
Date: 2026-05-12 10:32:49 Duration: 36s999ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:6182870
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SELECT 'd003866' AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ':' || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN de.direct_evidence ELSE NULL END AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) AS "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') AS "PubMedIDs" FROM gene_disease_reference gdr JOIN term g ON g.id = gdr.gene_id JOIN term d ON d.id = gdr.disease_id LEFT JOIN reference r ON r.id = gdr.reference_id LEFT JOIN term c ON c.id = gdr.via_chem_id LEFT JOIN LATERAL ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) AS disease_categories FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) dc ON TRUE LEFT JOIN LATERAL ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) AS direct_evidence FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) de ON gdr.via_chem_id IS NULL WHERE gdr.disease_id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score ORDER BY g.nm, d.nm_sort, de.direct_evidence, c.nm;
Date: 2026-05-11 15:16:51 Duration: 14s
12 2 32s195ms 16s82ms 16s113ms 16s97ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 11 14 1 16s113ms 16s113ms May 12 14 1 16s82ms 16s82ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 14:40:38 Duration: 16s113ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 14:31:06 Duration: 16s82ms Bind query: yes
13 2 31s499ms 15s394ms 16s104ms 15s749ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 11 14 1 16s104ms 16s104ms May 12 14 1 15s394ms 15s394ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 14:11:00 Duration: 16s104ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 14:30:00 Duration: 15s394ms Bind query: yes
14 2 15s59ms 7s487ms 7s571ms 7s529ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where (d.id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 11 15 2 15s59ms 7s529ms -
SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-11 15:09:42 Duration: 7s571ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2128996) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-05-11 15:10:53 Duration: 7s487ms Bind query: yes
15 1 3m21s 3m21s 3m21s 3m21s explain analyze select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 14 13 1 3m21s 3m21s [ User: pubeu - Total duration: 3m21s - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7282291 - Total duration: 3m21s - Times executed: 1 ]
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explain analyze SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-14 13:13:06 Duration: 3m21s Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:7282291
16 1 3m4s 3m4s 3m4s 3m4s select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 13 14 1 3m4s 3m4s -
SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:42:43 Duration: 3m4s
17 1 3m1s 3m1s 3m1s 3m1s select 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 13 14 1 3m1s 3m1s -
SELECT /* BatchChemGODAO */ 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:39:43 Duration: 3m1s Bind query: yes
18 1 2m40s 2m40s 2m40s 2m40s with sq as ( select c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" from ( select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false) x order by chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 11 14 1 2m40s 2m40s -
WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" FROM ( SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", -- sort-only columns sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false) x ORDER BY chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;
Date: 2026-05-11 14:00:31 Duration: 2m40s
19 1 2m31s 2m31s 2m31s 2m31s with descendant_terms as ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from descendant_terms dt join term c on c.id = dt.descendant_object_id join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 13 14 1 2m31s 2m31s -
WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431 ), sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM descendant_terms dt JOIN term c ON c.id = dt.descendant_object_id JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id ) SELECT DISTINCT 'D019216' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-13 14:48:08 Duration: 2m31s
20 1 52s799ms 52s799ms 52s799ms 52s799ms explain ( analyze, buffers, verbose, settings, wal ) select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.acc_txt = ? ) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 14 13 1 52s799ms 52s799ms -
explain ( analyze, buffers, verbose, settings, wal ) SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-14 13:14:15 Duration: 52s799ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 3m21s 3m21s 3m21s 1 3m21s explain analyze select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 14 13 1 3m21s 3m21s [ User: pubeu - Total duration: 3m21s - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7282291 - Total duration: 3m21s - Times executed: 1 ]
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explain analyze SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-14 13:13:06 Duration: 3m21s Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:7282291
2 3m4s 3m4s 3m4s 1 3m4s select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 13 14 1 3m4s 3m4s -
SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:42:43 Duration: 3m4s
3 3m1s 3m1s 3m1s 1 3m1s select 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 13 14 1 3m1s 3m1s -
SELECT /* BatchChemGODAO */ 'metals "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1376431)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:39:43 Duration: 3m1s Bind query: yes
4 2m40s 2m40s 2m40s 1 2m40s with sq as ( select c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" from ( select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false) x order by chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 11 14 1 2m40s 2m40s -
WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT "Input", "ChemicalName", "ChemicalID", "CasRN", "GeneSymbol", "GeneID", "Ontology", "GoTermName", "GoTermID" FROM ( SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID", -- sort-only columns sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false) x ORDER BY chem_nm_sort, gene_symbol_sort, "Ontology", nm_sort;
Date: 2026-05-11 14:00:31 Duration: 2m40s
5 2m31s 2m31s 2m31s 1 2m31s with descendant_terms as ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from descendant_terms dt join term c on c.id = dt.descendant_object_id join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 13 14 1 2m31s 2m31s -
WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431 ), sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM descendant_terms dt JOIN term c ON c.id = dt.descendant_object_id JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id ) SELECT DISTINCT 'D019216' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-13 14:48:08 Duration: 2m31s
6 52s799ms 52s799ms 52s799ms 1 52s799ms explain ( analyze, buffers, verbose, settings, wal ) select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.acc_txt = ? ) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 14 13 1 52s799ms 52s799ms -
explain ( analyze, buffers, verbose, settings, wal ) SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-14 13:14:15 Duration: 52s799ms
7 46s545ms 51s973ms 47s939ms 5 3m59s select ? AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casrn AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" from ( with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.acc_txt = ? ) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm as go_term_nm, gt.acc_txt as go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm as ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 11 13 1 47s724ms 47s724ms 14 2 1m33s 46s552ms May 12 10 1 51s973ms 51s973ms May 13 14 1 46s895ms 46s895ms [ User: pubeu - Total duration: 1m34s - Times executed: 2 ]
[ User: pub1 - Total duration: 51s973ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:6353290 - Total duration: 1m34s - Times executed: 2 ]
[ Application: pgAdmin 4 - CONN:4939229 - Total duration: 51s973ms - Times executed: 1 ]
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 10:25:39 Duration: 51s973ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:4939229
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 13:53:45 Duration: 47s724ms Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:6353290
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SELECT 'D015056' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:33:11 Duration: 46s895ms
8 18s263ms 1m44s 47s323ms 5 3m56s select associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where taxonterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 12 16 2 1m17s 38s975ms May 13 12 3 2m38s 52s888ms [ User: pubeu - Total duration: 1m44s - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:5065507 - Total duration: 1m44s - Times executed: 1 ]
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 673695) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-13 12:04:52 Duration: 1m44s Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:5065507
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 16:01:02 Duration: 39s406ms
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SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416) GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 16:12:43 Duration: 38s543ms
9 44s598ms 44s598ms 44s598ms 1 44s598ms explain ( analyze, buffers, verbose, settings, wal ) with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 14 13 1 44s598ms 44s598ms -
explain ( analyze, buffers, verbose, settings, wal ) WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:20:32 Duration: 44s598ms
10 39s263ms 49s923ms 42s369ms 4 2m49s with sq as materialized ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 11 14 3 1m59s 39s850ms May 12 10 1 49s923ms 49s923ms [ User: pub1 - Total duration: 49s923ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:4037727 - Total duration: 49s923ms - Times executed: 1 ]
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-12 10:24:14 Duration: 49s923ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:4037727
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-11 14:02:34 Duration: 40s246ms
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WITH sq AS MATERIALIZED ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-11 14:10:14 Duration: 40s42ms
11 41s269ms 41s269ms 41s269ms 1 41s269ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 13 14 1 41s269ms 41s269ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-13 14:32:50 Duration: 41s269ms Bind query: yes
12 16s655ms 1m38s 40s610ms 4 2m42s with descendant_terms as ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), filtered_ptr as ( select ptr.* from phenotype_term_reference ptr join descendant_terms dt on ptr.taxon_id = dt.descendant_object_id ) select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from filtered_ptr ptr join phenotype_term pt on pt.term_id = ptr.term_id and pt.phenotype_id = ptr.phenotype_id join term associatedterm on associatedterm.id = ptr.term_id join term phenotypeterm on phenotypeterm.id = ptr.phenotype_id left join term taxonterm on taxonterm.id = ptr.taxon_id join reference r on r.id = ptr.reference_id join ixn i on i.id = ptr.ixn_id join object_type o on o.id = associatedterm.object_type_id left join ixn_anatomy ia on ia.ixn_id = ptr.ixn_id left join term anatomyterm on anatomyterm.id = ia.anatomy_id group by associatedterm, associatedtermnmsort, phenotype, casrn, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedterm.id, phenotypeterm.id, pt.indirect_term_qty;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 13 12 4 2m42s 40s610ms -
WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 673695 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:06:38 Duration: 1m38s
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WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:00:03 Duration: 24s735ms
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WITH descendant_terms AS ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-13 12:00:50 Duration: 22s654ms
13 39s439ms 39s439ms 39s439ms 1 39s439ms with sq as ( select distinct c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, c.nm_sort as chem_nm_sort, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt, g.nm_sort as gene_symbol_sort from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? ) select distinct ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id where gga.is_not = false order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 14 13 1 39s439ms 39s439ms -
WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:26:12 Duration: 39s439ms
14 37s505ms 37s547ms 37s526ms 2 1m15s with sq as ( select c.id as chem_id, c.nm as chem_nm, c.acc_txt as chem_acc_txt, c.secondary_nm as casrn, gcr.gene_id, g.nm as gene_symbol, g.acc_txt as gene_acc_txt from term c join gene_chem_reference gcr on gcr.chem_id = c.id join term g on g.id = gcr.gene_id where c.acc_txt = ? group by c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) select ? AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casrn AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" from sq join gene_go_annot gga on gga.gene_id = sq.gene_id and gga.is_not = false join dag_node gt on gt.object_id = gga.go_term_id join dag d on d.id = gt.dag_id group by sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt order by sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 14 13 2 1m15s 37s526ms -
WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' GROUP BY c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) SELECT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id AND gga.is_not = false JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id GROUP BY sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:27:12 Duration: 37s547ms
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WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' GROUP BY c.id, c.nm, c.acc_txt, c.secondary_nm, gcr.gene_id, g.nm, g.acc_txt ) SELECT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id AND gga.is_not = false JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id GROUP BY sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, d.nm, gt.nm, gt.acc_txt ORDER BY sq.chem_nm, sq.gene_symbol, d.nm, gt.nm;
Date: 2026-05-14 13:28:04 Duration: 37s505ms
15 14s 36s999ms 25s499ms 2 50s999ms select ? AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ? || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", case when gdr.via_chem_id is null then de.direct_evidence else null end AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) AS "OmimIDs", string_agg(distinct r.acc_txt, ?) AS "PubMedIDs" from gene_disease_reference gdr join term g on g.id = gdr.gene_id join term d on d.id = gdr.disease_id left join reference r on r.id = gdr.reference_id left join term c on c.id = gdr.via_chem_id left join lateral ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) as disease_categories from slim_term_mapping stm where stm.mapped_term_id = d.id) dc on true left join lateral ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) as direct_evidence from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) de on gdr.via_chem_id is null where gdr.disease_id = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score order by g.nm, d.nm_sort, de.direct_evidence, c.nm;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 11 15 1 14s 14s May 12 10 1 36s999ms 36s999ms [ User: pub1 - Total duration: 36s999ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:6182870 - Total duration: 36s999ms - Times executed: 1 ]
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SELECT 'd003866' AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ':' || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN de.direct_evidence ELSE NULL END AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) AS "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') AS "PubMedIDs" FROM gene_disease_reference gdr JOIN term g ON g.id = gdr.gene_id JOIN term d ON d.id = gdr.disease_id LEFT JOIN reference r ON r.id = gdr.reference_id LEFT JOIN term c ON c.id = gdr.via_chem_id LEFT JOIN LATERAL ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) AS disease_categories FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) dc ON TRUE LEFT JOIN LATERAL ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) AS direct_evidence FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) de ON gdr.via_chem_id IS NULL WHERE gdr.disease_id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score ORDER BY g.nm, d.nm_sort, de.direct_evidence, c.nm;
Date: 2026-05-12 10:32:49 Duration: 36s999ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:6182870
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SELECT 'd003866' AS "Input", d.nm AS "DiseaseName", d.acc_db_cd || ':' || d.acc_txt AS "DiseaseID", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", dc.disease_categories AS "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN de.direct_evidence ELSE NULL END AS "DirectEvidence", c.nm AS "InferenceChemicalName", gdr.network_score AS "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) AS "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') AS "PubMedIDs" FROM gene_disease_reference gdr JOIN term g ON g.id = gdr.gene_id JOIN term d ON d.id = gdr.disease_id LEFT JOIN reference r ON r.id = gdr.reference_id LEFT JOIN term c ON c.id = gdr.via_chem_id LEFT JOIN LATERAL ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) AS disease_categories FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) dc ON TRUE LEFT JOIN LATERAL ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) AS direct_evidence FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) de ON gdr.via_chem_id IS NULL WHERE gdr.disease_id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, dc.disease_categories, de.direct_evidence, c.nm, gdr.via_chem_id, gdr.network_score ORDER BY g.nm, d.nm_sort, de.direct_evidence, c.nm;
Date: 2026-05-11 15:16:51 Duration: 14s
16 23s61ms 25s262ms 24s275ms 3 1m12s with descendant_terms as materialized ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ? ), filtered_ptr as materialized ( select ptr.* from phenotype_term_reference ptr join descendant_terms dt on ptr.taxon_id = dt.descendant_object_id ) select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id as associatedtermid, ptr.ixn_id as ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort as associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) as casrn, phenotypeterm.nm || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id as phenotypeid, string_agg(distinct taxonterm.nm || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?) as taxonterms, string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?) as anatomyterms, count(distinct taxonterm.nm) as taxoncount, i.ixn_prose_html as ixnprosehtml, i.ixn_prose_txt as ixnprose, i.sort_txt as ixnsort, string_agg(distinct r.acc_txt, ?) as references, count(distinct ptr.reference_id) as refcount, pt.indirect_term_qty as inferredcount, count(*) over () as full_count from filtered_ptr ptr join phenotype_term pt on pt.term_id = ptr.term_id and pt.phenotype_id = ptr.phenotype_id join term associatedterm on associatedterm.id = ptr.term_id join term phenotypeterm on phenotypeterm.id = ptr.phenotype_id left join term taxonterm on taxonterm.id = ptr.taxon_id join reference r on r.id = ptr.reference_id join ixn i on i.id = ptr.ixn_id join object_type o on o.id = associatedterm.object_type_id left join ixn_anatomy ia on ia.ixn_id = ptr.ixn_id left join term anatomyterm on anatomyterm.id = ia.anatomy_id group by associatedterm, associatedtermnmsort, phenotype, casrn, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedterm.id, phenotypeterm.id, pt.indirect_term_qty;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 12 16 2 49s763ms 24s881ms May 14 12 1 23s61ms 23s61ms [ User: pubeu - Total duration: 23s61ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7474459 - Total duration: 23s61ms - Times executed: 1 ]
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-- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:05:39 Duration: 25s262ms
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-- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:12:00 Duration: 24s501ms
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WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER () AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-14 12:38:25 Duration: 23s61ms Database: ctddev51 User: pubeu Application: pgAdmin 4 - CONN:7474459
17 14s458ms 39s871ms 19s511ms 6 1m57s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id = ? group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm_sort, "DirectEvidence", c.nm;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 11 15 5 1m17s 15s439ms May 12 10 1 39s871ms 39s871ms [ User: pub1 - Total duration: 39s871ms - Times executed: 1 ]
[ Application: pgAdmin 4 - CONN:7238277 - Total duration: 39s871ms - Times executed: 1 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-12 10:31:33 Duration: 39s871ms Database: ctddev51 User: pub1 Application: pgAdmin 4 - CONN:7238277
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-11 15:12:51 Duration: 16s613ms
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id = 2128996 GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm_sort, "DirectEvidence", c.nm;
Date: 2026-05-11 15:15:50 Duration: 15s465ms
18 16s947ms 17s223ms 17s90ms 4 1m8s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where taxonterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort asc, pt.indirect_term_qty desc limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 12 14 2 34s27ms 17s13ms 15 2 34s336ms 17s168ms -
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 15:34:26 Duration: 17s223ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 15:20:59 Duration: 17s112ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where taxonTerm.id in ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 1 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'MUS MUSCULUS' AND tl.object_type_id = 1))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-05-12 14:58:22 Duration: 17s79ms Bind query: yes
19 16s82ms 16s113ms 16s97ms 2 32s195ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where c.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 11 14 1 16s113ms 16s113ms May 12 14 1 16s82ms 16s82ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 14:40:38 Duration: 16s113ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 14:31:06 Duration: 16s82ms Bind query: yes
20 15s394ms 16s104ms 15s749ms 2 31s499ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 11 14 1 16s104ms 16s104ms May 12 14 1 15s394ms 15s394ms -
SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-11 14:11:00 Duration: 16s104ms Bind query: yes
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SELECT /* BatchChemGODAO */ 'd015056' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1430717)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-12 14:30:00 Duration: 15s394ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
-
Events
Log levels
Key values
- 11,490 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 17 FATAL entries
- 33 ERROR entries
- 1 WARNING entries
- 40 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 29 Max number of times the same event was reported
- 91 Total events found
Rank Times reported Error 1 29 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #1
Day Hour Count May 11 13 1 16 5 May 12 16 7 May 13 14 4 May 14 15 4 May 15 17 8 2 17 FATAL: terminating background worker "..." due to administrator command
Times Reported Most Frequent Error / Event #2
Day Hour Count May 12 15 17 - FATAL: terminating background worker "parallel worker" due to administrator command
- FATAL: terminating background worker "parallel worker" due to administrator command
- FATAL: terminating background worker "parallel worker" due to administrator command
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 1088840 ) AND associatedTerm.object_type_id = 1 GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 15:53:47
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416 ) AND associatedTerm.object_type_id = 1 GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 15:53:55
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 1 ) AND associatedTerm.object_type_id = 1 GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 15:54:25
3 16 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #3
Day Hour Count May 11 14 9 May 12 15 5 May 13 11 2 - ERROR: syntax error at or near "JOIN" at character 1582
- ERROR: syntax error at or near ")" at character 186
- ERROR: syntax error at or near ")" at character 1557
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Aggregated via Group By instead of repetitive subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr -- Join against dag_path immediately to filter ptr early INNER JOIN dag_path p ON ptr.term_id = p.descendant_object_id AND p.ancestor_object_id = ? INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE ptr.term_object_type_id = ? GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-11 14:33:31
Statement: WITH target_terms AS ( -- Early selection: get only the IDs we care about from the DAG SELECT descendant_object_id AS term_id FROM dag_path WHERE ancestor_object_id = ? ) SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr -- Join to our early-selected ID list INNER JOIN target_terms tt ON ptr.term_id = tt.term_id INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE ptr.term_object_type_id = ? GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-11 14:34:03
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM ( -- SELECT EARLY: Shrink the massive PTR table immediately SELECT * FROM phenotype_term_reference WHERE term_id IN ( SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = ? ) AND term_object_type_id = ? ) ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-11 14:34:18
4 11 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #4
Day Hour Count May 11 18 1 May 12 17 1 18 4 May 15 18 5 5 9 ERROR: canceling statement due to user request
Times Reported Most Frequent Error / Event #5
Day Hour Count May 11 14 3 May 12 15 4 May 13 14 1 May 14 13 1 - ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
Statement: SELECT 'D015056' AS "Input", c.nm AS "ChemicalName", c.acc_txt AS "ChemicalID", c.secondary_nm AS "CasRN", g.nm AS "GeneSymbol", g.acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN gene_go_annot gga ON g.id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE c.acc_txt = 'D015056' AND gga.is_not = false GROUP BY c.nm, c.acc_txt, c.secondary_nm, g.nm, g.acc_txt, d.nm, gt.nm, gt.acc_txt, c.nm_sort, g.nm_sort, gt.nm_sort ORDER BY c.nm_sort, g.nm_sort, d.nm, gt.nm_sort;
Date: 2026-05-11 14:16:05
Statement: SELECT 'D015056' AS "Input", sub.chem_nm AS "ChemicalName", sub.chem_acc_txt AS "ChemicalID", sub.casRN AS "CasRN", sub.gene_symbol AS "GeneSymbol", sub.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM ( -- Step 1: Strict Early Selection -- This narrows millions of rows down to a tiny working set SELECT c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, g.id AS gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) sub -- Step 2: Join the massive tables only against the tiny "sub" result INNER JOIN gene_go_annot gga ON sub.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY sub.chem_nm_sort, sub.gene_symbol_sort, d.nm, gt.nm_sort;
Date: 2026-05-11 14:33:29
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE taxonTerm.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 1088840 ) AND associatedTerm.object_type_id = 1 GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;
Date: 2026-05-12 15:53:47
6 1 ERROR: unterminated quoted string at or near "..." "
Times Reported Most Frequent Error / Event #6
Day Hour Count May 12 15 1 - ERROR: unterminated quoted string at or near "'Mus musculus" " at character 31
Statement: SELECT * FROM term where nm = 'Mus musculus"
Date: 2026-05-12 15:22:37 Database: ctddev51 Application: pgAdmin 4 - CONN:5263049 User: pubeu Remote:
7 1 ERROR: invalid reference to FROM-clause entry for table "..."
Times Reported Most Frequent Error / Event #7
Day Hour Count May 12 15 1 - ERROR: invalid reference to FROM-clause entry for table "phenotype_term" at character 2078
Hint: Perhaps you meant to reference the table alias "pt".
Statement: SELECT /* Optimized ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^' || 'GO' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, -- Move aggregation into the main group to avoid N+1 subqueries STRING_AGG(DISTINCT taxonTerm.nm || '^' || 'TAXON' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|') AS taxonTerms, STRING_AGG(DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|') AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM phenotype_term_reference ptr INNER JOIN phenotype_term pt ON ptr.term_id = pt.term_id AND ptr.phenotype_id = pt.phenotype_id INNER JOIN term associatedTerm ON ptr.term_id = associatedTerm.id INNER JOIN term phenotypeTerm ON ptr.phenotype_id = phenotypeTerm.id INNER JOIN reference r ON ptr.reference_id = r.id INNER JOIN ixn i ON ptr.ixn_id = i.id INNER JOIN object_type o ON associatedTerm.object_type_id = o.id LEFT OUTER JOIN term taxonTerm ON ptr.taxon_id = taxonTerm.id LEFT OUTER JOIN ixn_anatomy ia ON ptr.ixn_id = ia.ixn_id LEFT OUTER JOIN term anatomyTerm ON ia.anatomy_id = anatomyTerm.id WHERE phenotype_term.id IN ( -- Replaced ANY ARRAY with a standard IN for better Semi-Join optimization SELECT descendant_object_id FROM dag_path WHERE ancestor_object_id = 179416 ) AND associatedTerm.object_type_id = 1 GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount;Date: 2026-05-12 15:54:28
8 1 WARNING: is not a PostgreSQL server process
Times Reported Most Frequent Error / Event #8
Day Hour Count May 13 13 1 9 1 ERROR: for SELECT DISTINCT, ORDER BY expressions must appear in select list
Times Reported Most Frequent Error / Event #9
Day Hour Count May 11 13 1 - ERROR: for SELECT DISTINCT, ORDER BY expressions must appear in select list at character 1136
Statement: WITH sq AS ( SELECT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON gcr.chem_id = c.id JOIN term g ON g.id = gcr.gene_id WHERE c.acc_txt = 'D015056' ) SELECT DISTINCT 'D015056' AS "Input", sq.chem_nm AS "ChemicalName", sq.chem_acc_txt AS "ChemicalID", sq.casRN AS "CasRN", sq.gene_symbol AS "GeneSymbol", sq.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM sq JOIN gene_go_annot gga ON gga.gene_id = sq.gene_id JOIN dag_node gt ON gt.object_id = gga.go_term_id JOIN dag d ON d.id = gt.dag_id WHERE gga.is_not = false ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort;
Date: 2026-05-11 13:56:38 Database: ctddev51 Application: pgAdmin 4 - CONN:6852351 User: pubeu Remote:
10 1 ERROR: argument of WHERE must be type boolean, not type integer
Times Reported Most Frequent Error / Event #10
Day Hour Count May 12 16 1 - ERROR: argument of WHERE must be type boolean, not type integer at character 359
Statement: -- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ), filtered_ptr AS MATERIALIZED ( SELECT ptr.* FROM phenotype_term_reference ptr JOIN descendant_terms dt ON ptr.taxon_id = dt.descendant_object_id WHERE 1 ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG( DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|' ) AS taxonTerms, STRING_AGG( DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM filtered_ptr ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;
Date: 2026-05-12 16:05:09
11 1 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #11
Day Hour Count May 11 14 1 - ERROR: relation "disease_slim_mapping" does not exist at character 302
Statement: SELECT /* BatchDiseaseGeneAssnsDAO */ 'd003866' as "Input" ,d.nm "DiseaseName" ,d.acc_db_cd || ':' || d.acc_txt "DiseaseID" ,g.nm "GeneSymbol" ,g.acc_txt "GeneID" ,( /* This represents DISEASE_SLIM_MAPPINGS_SQL */ SELECT STRING_AGG(slim.nm, '|') FROM disease_slim_mapping dsm JOIN term slim ON dsm.slim_id = slim.id WHERE dsm.disease_id = d.id ) "DiseaseCategories" ,CASE WHEN gdr.via_chem_id IS NULL THEN (SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence" ,c.nm "InferenceChemicalName" ,gdr.network_score "InferenceScore" ,STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs" ,STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE /* Assuming inputObjectTypeCd is GENE_OBJECT_TYPE_CD */ d.id = 1442029 GROUP BY g.nm ,g.acc_txt ,d.nm ,d.id ,d.acc_txt ,d.acc_db_cd ,d.nm_sort ,CASE WHEN gdr.via_chem_id IS NULL THEN (SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END ,c.nm ,gdr.network_score ORDER BY g.nm ,d.nm_sort ,"DirectEvidence" ,c.nm;
Date: 2026-05-11 14:49:41
12 1 ERROR: missing FROM-clause entry for table "..."
Times Reported Most Frequent Error / Event #12
Day Hour Count May 11 14 1 - ERROR: missing FROM-clause entry for table "chem" at character 40
Statement: SELECT 'D015056' AS "Input", chem.nm AS "ChemicalName", chem.acc_txt AS "ChemicalID", chem.secondary_nm AS "CasRN", genes.gene_symbol AS "GeneSymbol", genes.gene_acc_txt AS "GeneID", d.nm AS "Ontology", gt.nm AS "GoTermName", gt.acc_txt AS "GoTermID" FROM ( -- Step 1: Isolate the specific chemical and its genes immediately SELECT c.id AS chem_id, c.nm, c.acc_txt, c.secondary_nm, c.nm_sort, g.id AS gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c JOIN gene_chem_reference gcr ON c.id = gcr.chem_id JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt = 'D015056' ) genes -- Step 2: Join to annotations only for those specific genes INNER JOIN gene_go_annot gga ON genes.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false ORDER BY genes.nm_sort, genes.gene_symbol_sort, d.nm, gt.nm_sort;
Date: 2026-05-11 14:19:02
13 1 ERROR: operator does not exist: character varying = integer
Times Reported Most Frequent Error / Event #13
Day Hour Count May 13 14 1 - ERROR: operator does not exist: character varying = integer at character 664
Hint: No operator matches the given name and argument types. You might need to add explicit type casts.
Statement: SELECT 'D019216' AS "Input", sqi.chem_nm AS "ChemicalName", sqi.chem_acc_txt AS "ChemicalID", sqi.casRN AS "CasRN", sqi.gene_symbol AS "GeneSymbol", sqi.gene_acc_txt AS "GeneID", sqi.ontology_nm AS "Ontology", sqi.go_term_nm AS "GoTermName", sqi.go_acc_txt AS "GoTermID" FROM (WITH sq AS ( SELECT DISTINCT c.id AS chem_id, c.nm AS chem_nm, c.acc_txt AS chem_acc_txt, c.secondary_nm AS casRN, c.nm_sort AS chem_nm_sort, gcr.gene_id, g.nm AS gene_symbol, g.acc_txt AS gene_acc_txt, g.nm_sort AS gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE c.acc_txt in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 1376431 )) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm AS go_term_nm, gt.acc_txt AS go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm AS ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false /* optional DAG filters */ ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Date: 2026-05-13 14:38:36
14 1 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #14
Day Hour Count May 12 16 1 - ERROR: column ptr.term_id does not exist at character 1670
Hint: Perhaps you meant to reference the column "pt.term_id".
Statement: -- Average runtime in PGAdmin average= 1.3s WITH descendant_terms AS MATERIALIZED ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = 179416 ) SELECT DISTINCT associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd AS associatedTerm, associatedTerm.id AS associatedTermId, ptr.ixn_id AS ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort AS associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') AS casRN, phenotypeTerm.nm || '^GO^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd AS phenotype, phenotypeTerm.id AS phenotypeId, STRING_AGG( DISTINCT taxonTerm.nm || '^TAXON^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|' ) AS taxonTerms, STRING_AGG( DISTINCT anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) AS anatomyTerms, COUNT(DISTINCT taxonTerm.nm) AS taxonCount, i.ixn_prose_html AS ixnProseHtml, i.ixn_prose_txt AS ixnProse, i.sort_txt AS ixnSort, STRING_AGG(DISTINCT r.acc_txt, '|') AS references, COUNT(DISTINCT ptr.reference_id) AS refCount, pt.indirect_term_qty AS inferredCount, COUNT(*) OVER() AS full_count FROM descendant_terms ptr JOIN phenotype_term pt ON pt.term_id = ptr.term_id AND pt.phenotype_id = ptr.phenotype_id JOIN term associatedTerm ON associatedTerm.id = ptr.term_id JOIN term phenotypeTerm ON phenotypeTerm.id = ptr.phenotype_id LEFT JOIN term taxonTerm ON taxonTerm.id = ptr.taxon_id JOIN reference r ON r.id = ptr.reference_id JOIN ixn i ON i.id = ptr.ixn_id JOIN object_type o ON o.id = associatedTerm.object_type_id LEFT JOIN ixn_anatomy ia ON ia.ixn_id = ptr.ixn_id LEFT JOIN term anatomyTerm ON anatomyTerm.id = ia.anatomy_id GROUP BY associatedTerm, associatedTermNmSort, phenotype, casRN, ptr.ixn_id, i.ixn_prose_html, i.ixn_prose_txt, i.sort_txt, associatedTerm.id, phenotypeTerm.id, pt.indirect_term_qty;Date: 2026-05-12 16:02:07