pgBadger-
Global information
- Generated on Sun Jul 14 04:15:08 2024
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20240713
- Parsed 195,159 log entries in 7s
- Log start from 2024-07-07 00:00:02 to 2024-07-13 23:59:13
-
Overview
Global Stats
- 283 Number of unique normalized queries
- 2,441 Number of queries
- 10h19m47s Total query duration
- 2024-07-07 00:15:24 First query
- 2024-07-13 23:13:03 Last query
- 2 queries/s at 2024-07-12 05:43:08 Query peak
- 10h19m47s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 10h19m47s Execute total duration
- 8 Number of events
- 3 Number of unique normalized events
- 4 Max number of times the same event was reported
- 0 Number of cancellation
- 25 Total number of automatic vacuums
- 132 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 13,710 Total number of sessions
- 52 sessions at 2024-07-11 03:23:51 Session peak
- 281d22h6m43s Total duration of sessions
- 29m36s Average duration of sessions
- 0 Average queries per session
- 2s712ms Average queries duration per session
- 29m33s Average idle time per session
- 13,710 Total number of connections
- 35 connections/s at 2024-07-10 09:19:48 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 2 queries/s Query Peak
- 2024-07-12 05:43:08 Date
SELECT Traffic
Key values
- 2 queries/s Query Peak
- 2024-07-12 05:43:08 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2024-07-12 14:01:05 Date
Queries duration
Key values
- 10h19m47s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 07 00 5 0ms 16m17s 3m17s 0ms 1s565ms 16m22s 01 7 0ms 3s938ms 2s165ms 1s818ms 3s77ms 3s938ms 02 12 0ms 2s204ms 1s442ms 1s419ms 1s429ms 2s204ms 03 7 0ms 4s136ms 2s45ms 2s41ms 2s91ms 4s136ms 04 21 0ms 3s989ms 2s715ms 3s950ms 3s988ms 5s57ms 05 51 0ms 4s181ms 2s218ms 4s898ms 13s746ms 25s453ms 06 27 0ms 33s230ms 5s110ms 4s12ms 9s496ms 53s658ms 07 9 0ms 5s533ms 2s133ms 1s353ms 1s980ms 5s533ms 08 13 0ms 4s199ms 2s776ms 3s924ms 3s983ms 9s352ms 09 39 0ms 5s99ms 2s192ms 4s175ms 10s129ms 24s662ms 10 18 0ms 33s307ms 6s840ms 4s70ms 9s485ms 53s453ms 11 8 0ms 5s126ms 2s233ms 1s367ms 2s582ms 5s126ms 12 14 0ms 5s176ms 1s544ms 1s426ms 2s676ms 5s176ms 13 2 0ms 3s23ms 2s969ms 0ms 2s914ms 3s23ms 14 16 0ms 33s274ms 8s412ms 5s225ms 11s372ms 53s477ms 15 6 0ms 1s377ms 1s210ms 1s119ms 1s175ms 1s377ms 16 7 0ms 5s167ms 2s361ms 2s171ms 3s927ms 5s167ms 17 4 0ms 5s461ms 3s72ms 1s338ms 3s926ms 5s461ms 18 18 0ms 33s128ms 6s587ms 2s177ms 9s479ms 53s476ms 19 6 0ms 1s317ms 1s220ms 1s224ms 1s317ms 2s350ms 20 14 0ms 4s776ms 2s561ms 3s953ms 4s16ms 4s776ms 21 19 0ms 23s395ms 4s104ms 3s974ms 3s996ms 28s691ms 22 19 0ms 13s21ms 2s791ms 3s916ms 6s608ms 13s21ms 23 8 0ms 9s30ms 2s615ms 1s202ms 4s17ms 9s30ms Jul 08 00 6 0ms 16m16s 2m44s 1s345ms 5s144ms 16m21s 01 6 0ms 1m12s 13s786ms 1s360ms 5s261ms 1m12s 02 6 0ms 9m7s 5m46s 1s142ms 9m7s 25m28s 03 29 0ms 7s104ms 2s677ms 7s104ms 9s247ms 16s862ms 04 5 0ms 1s395ms 1s199ms 0ms 1s259ms 2s151ms 05 52 0ms 5s338ms 2s164ms 5s638ms 13s814ms 25s213ms 06 11 0ms 33s141ms 7s626ms 1s262ms 4s31ms 40s966ms 07 16 0ms 10m3s 39s427ms 4s68ms 7s83ms 10m3s 08 16 0ms 8s79ms 3s536ms 2s544ms 5s80ms 30s338ms 09 7 0ms 6s479ms 4s718ms 4s9ms 6s479ms 10s523ms 10 19 0ms 33s191ms 5s721ms 2s483ms 9s514ms 41s31ms 11 32 0ms 5s273ms 2s814ms 6s580ms 6s835ms 9s967ms 12 2 0ms 1s361ms 1s188ms 0ms 1s16ms 1s361ms 13 4 0ms 1m51s 29s689ms 0ms 1s141ms 1m51s 14 14 0ms 33s107ms 7s961ms 1s420ms 9s470ms 53s735ms 15 9 0ms 4s27ms 1s688ms 1s347ms 2s589ms 4s27ms 16 7 0ms 13s550ms 3s903ms 0ms 5s739ms 13s550ms 17 5 0ms 5s188ms 3s928ms 2s22ms 4s227ms 9s398ms 18 12 0ms 33s297ms 8s877ms 1s288ms 41s234ms 53s453ms 19 6 0ms 2s858ms 1s940ms 1s360ms 2s161ms 2s858ms 20 3 0ms 3s28ms 1s872ms 0ms 1s276ms 3s28ms 21 16 0ms 3s994ms 2s96ms 3s866ms 3s994ms 5s375ms 22 11 0ms 5s202ms 3s145ms 3s968ms 4s53ms 5s202ms 23 5 0ms 1s376ms 1s208ms 1s6ms 1s214ms 1s376ms Jul 09 00 9 0ms 16m16s 1m51s 1s568ms 3s928ms 16m21s 01 23 0ms 5s568ms 2s623ms 5s163ms 5s568ms 9s293ms 02 34 0ms 10m9s 44s447ms 7s951ms 3m42s 10m9s 03 13 0ms 44s842ms 5s136ms 3s361ms 5s137ms 44s842ms 04 16 0ms 41s276ms 12s66ms 2s551ms 3s954ms 2m45s 05 37 0ms 4s186ms 2s303ms 12s605ms 24s804ms 25s328ms 06 21 0ms 33s133ms 7s29ms 6s772ms 29s824ms 40s972ms 07 5 0ms 3s928ms 1s845ms 0ms 1s443ms 3s928ms 08 8 0ms 4s266ms 3s362ms 3s903ms 4s45ms 4s266ms 09 10 0ms 4s130ms 2s336ms 2s463ms 2s507ms 4s130ms 10 16 0ms 33s206ms 7s478ms 3s955ms 9s530ms 53s516ms 11 14 0ms 3s997ms 2s457ms 3s962ms 3s997ms 8s354ms 12 10 0ms 4s196ms 2s141ms 1s407ms 4s196ms 5s446ms 13 13 0ms 35s825ms 6s918ms 3s934ms 5s179ms 35s825ms 14 15 0ms 33s206ms 7s485ms 1s209ms 9s506ms 53s705ms 15 6 0ms 1s364ms 1s258ms 1s153ms 1s246ms 2s571ms 16 7 0ms 6s130ms 3s38ms 1s514ms 4s976ms 9s674ms 17 8 0ms 5s551ms 2s409ms 1s176ms 3s899ms 6s700ms 18 15 0ms 33s231ms 7s509ms 2s808ms 41s113ms 53s550ms 19 6 0ms 3s920ms 1s730ms 1s290ms 2s689ms 3s920ms 20 5 0ms 4s217ms 1s787ms 1s175ms 1s187ms 4s217ms 21 10 0ms 14s98ms 2s868ms 1s542ms 3s205ms 14s98ms 22 13 0ms 5s238ms 2s90ms 1s618ms 3s944ms 10s359ms 23 17 0ms 7s116ms 3s604ms 7s14ms 8s171ms 14s137ms Jul 10 00 6 0ms 16m20s 2m45s 1s182ms 4s129ms 16m25s 01 8 0ms 3s999ms 3s155ms 3s925ms 3s941ms 3s999ms 02 26 0ms 3m37s 10s825ms 5s465ms 8s473ms 3m37s 03 16 0ms 17s576ms 4s517ms 5s367ms 8s706ms 17s576ms 04 17 0ms 5s370ms 2s556ms 2s515ms 3s939ms 10s698ms 05 54 0ms 10m49s 1m11s 10m10s 10m15s 11m10s 06 30 0ms 10m21s 25s275ms 7s120ms 40s935ms 10m21s 07 8 0ms 4s3ms 1s910ms 1s171ms 1s340ms 4s3ms 08 12 0ms 12s959ms 3s364ms 1s386ms 5s260ms 12s959ms 09 16 0ms 7s103ms 2s997ms 5s71ms 6s974ms 8s453ms 10 32 0ms 33s199ms 5s13ms 6s249ms 16s257ms 53s796ms 11 31 0ms 7s79ms 5s752ms 14s101ms 20s785ms 21s69ms 12 16 0ms 4s530ms 2s806ms 3s935ms 4s77ms 19s284ms 13 9 0ms 14s52ms 3s567ms 4s131ms 4s224ms 15s320ms 14 25 0ms 33s155ms 5s791ms 4s139ms 19s500ms 54s775ms 15 8 0ms 5s142ms 2s744ms 1s411ms 3s932ms 5s142ms 16 6 0ms 3s994ms 2s685ms 1s839ms 2s697ms 3s994ms 17 11 0ms 4m9s 24s493ms 4s923ms 8s964ms 4m9s 18 17 0ms 33s276ms 6s596ms 1s265ms 41s143ms 53s412ms 19 3 0ms 1s314ms 1s224ms 1s176ms 1s184ms 1s314ms 20 28 0ms 4s241ms 3s788ms 8s440ms 12s44ms 12s392ms 21 6 0ms 4s56ms 2s84ms 1s355ms 2s493ms 4s56ms 22 13 0ms 5s438ms 3s189ms 5s181ms 10s543ms 10s812ms 23 8 0ms 1s892ms 1s322ms 1s286ms 1s380ms 1s892ms Jul 11 00 5 0ms 16m16s 3m17s 0ms 2s301ms 16m21s 01 7 0ms 7s28ms 3s371ms 5s133ms 5s177ms 7s28ms 02 14 0ms 3m37s 17s762ms 4s5ms 5s247ms 3m37s 03 26 0ms 17s794ms 5s686ms 14s891ms 44s98ms 51s780ms 04 21 0ms 50m33s 2m27s 5s265ms 7s991ms 50m33s 05 44 0ms 5s296ms 2s270ms 5s296ms 13s844ms 25s860ms 06 17 0ms 33s168ms 7s316ms 5s912ms 15s865ms 41s19ms 07 16 0ms 13s889ms 3s625ms 3s943ms 7s816ms 15s637ms 08 5 0ms 20s695ms 9s200ms 1s173ms 3s939ms 20s695ms 09 13 0ms 8m27s 45s306ms 9s443ms 11s33ms 8m27s 10 15 0ms 33s209ms 7s687ms 2s560ms 9s504ms 53s480ms 11 5 0ms 17s486ms 4s509ms 1s175ms 1s535ms 17s486ms 12 4 0ms 3s939ms 3s250ms 1s189ms 3s938ms 3s939ms 13 27 0ms 6s80ms 2s535ms 3s958ms 13s722ms 22s226ms 14 20 0ms 33s137ms 6s553ms 7s923ms 40s994ms 53s820ms 15 7 0ms 4s5ms 2s404ms 1s413ms 5s55ms 5s187ms 16 9 0ms 5s347ms 2s934ms 3s907ms 3s976ms 5s347ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 33s221ms 9s936ms 1s57ms 6s887ms 46s976ms 19 9 0ms 4s70ms 1s855ms 1s174ms 1s262ms 8s50ms 20 3 0ms 5s70ms 2s886ms 0ms 2s315ms 5s70ms 21 36 0ms 38s568ms 3s866ms 11s597ms 29s132ms 38s568ms 22 10 0ms 5s455ms 3s56ms 2s573ms 4s497ms 17s185ms 23 11 0ms 6s995ms 2s361ms 3s859ms 3s994ms 6s995ms Jul 12 00 14 0ms 16m19s 1m13s 4s257ms 6s503ms 16m24s 01 13 0ms 4s110ms 3s619ms 4s28ms 4s110ms 7s992ms 02 12 0ms 4s562ms 3s13ms 3s911ms 3s919ms 4s562ms 03 16 0ms 4s6ms 3s98ms 3s997ms 7s905ms 7s933ms 04 25 0ms 7s138ms 3s340ms 5s265ms 10s707ms 14s856ms 05 55 0ms 4s986ms 2s627ms 9s333ms 17s855ms 29s392ms 06 44 0ms 33s254ms 5s408ms 8s41ms 20s661ms 1m1s 07 13 0ms 3s966ms 3s531ms 3s948ms 3s953ms 3s966ms 08 16 0ms 6s827ms 3s587ms 4s107ms 6s827ms 8s71ms 09 10 0ms 16s656ms 3s402ms 2s197ms 3s887ms 16s656ms 10 19 0ms 33s206ms 6s239ms 1s571ms 9s514ms 53s542ms 11 8 0ms 4s223ms 1s955ms 1s164ms 2s563ms 5s141ms 12 24 0ms 4m49s 1m12s 5s293ms 7m49s 10m56s 13 20 0ms 4m52s 1m44s 2m59s 4m36s 14m16s 14 15 0ms 33s269ms 9s981ms 9s472ms 41s162ms 53s551ms 15 2 0ms 3s916ms 2s641ms 0ms 0ms 3s916ms 16 7 0ms 4s551ms 2s942ms 1s173ms 4s75ms 4s551ms 17 11 0ms 4s102ms 2s366ms 2s993ms 3s960ms 5s153ms 18 12 0ms 33s210ms 9s110ms 3s941ms 41s218ms 53s546ms 19 16 0ms 4s317ms 3s151ms 4s88ms 4s100ms 4s317ms 20 5 0ms 4s738ms 2s35ms 1s162ms 1s844ms 4s738ms 21 3 0ms 1s561ms 1s285ms 0ms 1s154ms 1s561ms 22 9 0ms 5s36ms 1s619ms 1s185ms 1s342ms 5s36ms 23 3 0ms 5s155ms 3s481ms 0ms 1s357ms 5s155ms Jul 13 00 15 0ms 16m18s 1m7s 4s129ms 4s592ms 16m22s 01 6 0ms 5s233ms 2s263ms 1s182ms 3s896ms 6s238ms 02 5 0ms 1s415ms 1s323ms 1s284ms 1s394ms 1s415ms 03 5 0ms 5s206ms 2s543ms 1s181ms 3s906ms 5s206ms 04 12 0ms 4s89ms 3s436ms 3s963ms 4s83ms 7s824ms 05 61 0ms 4s207ms 2s810ms 5s128ms 17s798ms 29s234ms 06 30 0ms 4s98ms 3s39ms 5s101ms 5s193ms 9s117ms 07 31 0ms 5s296ms 3s792ms 7s935ms 7s953ms 15s544ms 08 19 0ms 5s177ms 3s703ms 4s7ms 7s908ms 11s893ms 09 13 0ms 19s207ms 3s55ms 2s362ms 3s830ms 19s207ms 10 9 0ms 5s215ms 2s272ms 1s217ms 7s157ms 7s599ms 11 7 0ms 8s755ms 4s117ms 3s137ms 8s755ms 9s282ms 12 11 0ms 5s274ms 2s676ms 1s887ms 3s918ms 14s440ms 13 4 0ms 4s82ms 1s977ms 1s174ms 1s342ms 4s82ms 14 6 0ms 5s331ms 3s517ms 1s349ms 4s81ms 10s410ms 15 6 0ms 14s221ms 3s890ms 1s278ms 4s146ms 14s221ms 16 11 0ms 4s330ms 3s308ms 3s975ms 4s274ms 4s330ms 17 10 0ms 4s253ms 1s902ms 1s926ms 2s529ms 4s253ms 18 28 0ms 1m11s 14s185ms 48s591ms 58s210ms 1m18s 19 48 0ms 23m23s 1m37s 1m55s 7m2s 24m 20 6 0ms 5s565ms 2s629ms 1s589ms 3s980ms 5s565ms 21 2 0ms 1s141ms 1s120ms 0ms 1s98ms 1s141ms 22 3 0ms 4s3ms 3s189ms 0ms 3s942ms 4s3ms 23 2 0ms 4s140ms 2s979ms 0ms 1s818ms 4s140ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 07 00 4 0 4m5s 0ms 0ms 16m17s 01 7 0 2s165ms 0ms 1s818ms 3s938ms 02 11 0 1s372ms 1s360ms 1s416ms 1s430ms 03 7 0 2s45ms 0ms 2s41ms 4s136ms 04 21 0 2s715ms 3s932ms 3s950ms 5s57ms 05 47 0 2s220ms 2s324ms 4s898ms 25s453ms 06 17 10 5s110ms 1s446ms 4s12ms 41s59ms 07 9 0 2s133ms 0ms 1s353ms 3s924ms 08 13 0 2s776ms 1s394ms 3s924ms 9s352ms 09 39 0 2s192ms 3s244ms 4s175ms 24s662ms 10 8 10 6s840ms 1s410ms 4s70ms 53s453ms 11 8 0 2s233ms 0ms 1s367ms 5s126ms 12 14 0 1s544ms 1s189ms 1s426ms 5s176ms 13 2 0 2s969ms 0ms 0ms 3s23ms 14 6 10 8s412ms 1s179ms 5s225ms 53s477ms 15 6 0 1s210ms 0ms 1s119ms 1s377ms 16 7 0 2s361ms 0ms 2s171ms 5s167ms 17 4 0 3s72ms 0ms 1s338ms 5s461ms 18 8 10 6s587ms 1s155ms 2s177ms 53s476ms 19 6 0 1s220ms 0ms 1s224ms 2s350ms 20 14 0 2s561ms 2s71ms 3s953ms 4s776ms 21 19 0 4s104ms 3s895ms 3s974ms 28s691ms 22 19 0 2s791ms 1s529ms 3s916ms 13s21ms 23 8 0 2s615ms 0ms 1s202ms 9s30ms Jul 08 00 5 0 3m16s 0ms 1s345ms 16m16s 01 6 0 13s786ms 0ms 1s360ms 1m12s 02 6 0 5m46s 0ms 1s142ms 25m28s 03 28 0 2s656ms 4s95ms 7s104ms 16s862ms 04 5 0 1s199ms 0ms 0ms 2s151ms 05 48 0 2s162ms 1s369ms 5s338ms 25s213ms 06 5 6 7s626ms 0ms 1s188ms 40s966ms 07 16 0 39s427ms 0ms 4s68ms 10m3s 08 16 0 3s536ms 1s278ms 2s544ms 30s338ms 09 7 0 4s718ms 0ms 4s9ms 10s523ms 10 10 9 5s721ms 1s275ms 2s483ms 41s31ms 11 31 0 2s841ms 4s495ms 6s580ms 9s967ms 12 2 0 1s188ms 0ms 0ms 1s361ms 13 4 0 29s689ms 0ms 0ms 1m51s 14 4 10 7s961ms 0ms 1s420ms 53s735ms 15 9 0 1s688ms 1s146ms 1s347ms 4s27ms 16 7 0 3s903ms 0ms 0ms 13s550ms 17 5 0 3s928ms 0ms 2s22ms 9s398ms 18 2 10 8s877ms 0ms 1s288ms 53s453ms 19 6 0 1s940ms 0ms 1s360ms 2s858ms 20 3 0 1s872ms 0ms 0ms 3s28ms 21 16 0 2s96ms 1s440ms 3s866ms 5s375ms 22 11 0 3s145ms 1s337ms 3s968ms 5s202ms 23 5 0 1s208ms 0ms 1s6ms 1s376ms Jul 09 00 8 0 2m4s 0ms 1s568ms 16m16s 01 23 0 2s623ms 3s896ms 5s163ms 9s293ms 02 34 0 44s447ms 5s372ms 7s951ms 10m9s 03 13 0 5s136ms 1s256ms 3s361ms 44s842ms 04 16 0 12s66ms 0ms 2s551ms 2m45s 05 33 0 2s317ms 0ms 12s605ms 25s328ms 06 12 8 7s286ms 3s930ms 6s772ms 40s972ms 07 5 0 1s845ms 0ms 0ms 2s580ms 08 8 0 3s362ms 0ms 3s903ms 4s266ms 09 10 0 2s336ms 1s353ms 2s463ms 4s130ms 10 6 10 7s478ms 0ms 3s955ms 53s516ms 11 14 0 2s457ms 1s422ms 3s962ms 8s354ms 12 9 0 2s168ms 0ms 1s174ms 5s446ms 13 13 0 6s918ms 1s181ms 3s934ms 35s825ms 14 5 10 7s485ms 0ms 1s209ms 53s705ms 15 6 0 1s258ms 0ms 1s153ms 2s571ms 16 7 0 3s38ms 0ms 1s514ms 9s674ms 17 8 0 2s409ms 0ms 1s176ms 6s700ms 18 5 10 7s509ms 1s22ms 2s808ms 53s550ms 19 6 0 1s730ms 0ms 1s290ms 3s920ms 20 5 0 1s787ms 0ms 1s175ms 4s217ms 21 10 0 2s868ms 1s167ms 1s542ms 14s98ms 22 13 0 2s90ms 1s189ms 1s618ms 10s359ms 23 17 0 3s604ms 1s592ms 7s14ms 14s137ms Jul 10 00 5 0 3m17s 0ms 1s182ms 16m20s 01 8 0 3s155ms 1s432ms 3s925ms 3s999ms 02 26 0 10s825ms 3s970ms 5s465ms 3m37s 03 16 0 4s517ms 3s943ms 5s367ms 17s576ms 04 17 0 2s556ms 1s545ms 2s515ms 10s698ms 05 50 0 1m17s 5s192ms 10m10s 10m49s 06 21 9 25s275ms 1s417ms 7s120ms 40s935ms 07 8 0 1s910ms 0ms 1s171ms 3s957ms 08 12 0 3s364ms 1s155ms 1s386ms 8s39ms 09 16 0 2s997ms 1s187ms 5s71ms 8s453ms 10 22 10 5s13ms 1s484ms 6s249ms 41s61ms 11 31 0 5s752ms 6s896ms 14s101ms 20s964ms 12 16 0 2s806ms 1s226ms 3s935ms 19s284ms 13 9 0 3s567ms 0ms 4s131ms 15s320ms 14 15 10 5s791ms 1s252ms 4s139ms 53s523ms 15 8 0 2s744ms 0ms 1s411ms 5s142ms 16 6 0 2s685ms 0ms 1s839ms 3s994ms 17 11 0 24s493ms 1s634ms 4s923ms 4m9s 18 7 10 6s596ms 1s159ms 1s265ms 53s412ms 19 3 0 1s224ms 0ms 1s176ms 1s314ms 20 28 0 3s788ms 7s945ms 8s440ms 12s392ms 21 6 0 2s84ms 0ms 1s355ms 4s56ms 22 13 0 3s189ms 1s177ms 5s181ms 10s812ms 23 7 0 1s241ms 0ms 1s213ms 1s380ms Jul 11 00 4 0 4m5s 0ms 0ms 16m16s 01 7 0 3s371ms 1s179ms 5s133ms 7s28ms 02 14 0 17s762ms 1s524ms 4s5ms 3m37s 03 26 0 5s686ms 2s450ms 14s891ms 51s780ms 04 21 0 2m27s 3s945ms 5s265ms 50m33s 05 40 0 2s278ms 0ms 5s296ms 25s860ms 06 9 8 7s316ms 1s133ms 5s912ms 41s19ms 07 16 0 3s625ms 1s169ms 3s943ms 9s553ms 08 5 0 9s200ms 0ms 1s173ms 20s695ms 09 13 0 45s306ms 6s127ms 9s443ms 8m27s 10 5 10 7s687ms 0ms 2s560ms 53s480ms 11 5 0 4s509ms 0ms 1s175ms 17s486ms 12 4 0 3s250ms 0ms 1s189ms 3s939ms 13 25 0 2s560ms 0ms 3s958ms 17s782ms 14 11 9 6s553ms 3s997ms 7s923ms 53s820ms 15 7 0 2s404ms 0ms 1s413ms 5s187ms 16 9 0 2s934ms 0ms 3s907ms 5s347ms 17 0 0 0ms 0ms 0ms 0ms 18 2 7 9s936ms 0ms 1s57ms 46s976ms 19 9 0 1s855ms 0ms 1s174ms 8s50ms 20 3 0 2s886ms 0ms 0ms 5s70ms 21 34 0 3s960ms 1s187ms 11s597ms 38s568ms 22 10 0 3s56ms 0ms 2s573ms 17s185ms 23 11 0 2s361ms 1s357ms 3s859ms 6s995ms Jul 12 00 13 0 1m18s 1s993ms 4s257ms 16m19s 01 13 0 3s619ms 3s926ms 4s28ms 7s992ms 02 11 0 2s992ms 1s182ms 3s911ms 4s562ms 03 16 0 3s98ms 3s896ms 3s997ms 7s933ms 04 25 0 3s340ms 4s89ms 5s265ms 14s856ms 05 51 0 2s662ms 3s963ms 8s88ms 29s392ms 06 34 10 5s408ms 4s83ms 8s41ms 41s87ms 07 13 0 3s531ms 3s930ms 3s948ms 3s966ms 08 16 0 3s587ms 3s916ms 4s107ms 8s71ms 09 10 0 3s402ms 0ms 2s197ms 16s656ms 10 9 10 6s239ms 1s263ms 1s571ms 53s542ms 11 8 0 1s955ms 0ms 1s164ms 5s141ms 12 24 0 1m12s 2s433ms 5s293ms 10m56s 13 20 0 1m44s 2s288ms 2m59s 14m16s 14 5 10 9s981ms 1s174ms 9s472ms 53s551ms 15 2 0 2s641ms 0ms 0ms 3s916ms 16 7 0 2s942ms 0ms 1s173ms 4s198ms 17 11 0 2s366ms 1s166ms 2s993ms 5s153ms 18 2 10 9s110ms 0ms 3s941ms 53s546ms 19 16 0 3s151ms 3s912ms 4s88ms 4s317ms 20 5 0 2s35ms 0ms 1s162ms 4s738ms 21 3 0 1s285ms 0ms 0ms 1s561ms 22 9 0 1s619ms 0ms 1s185ms 5s36ms 23 3 0 3s481ms 0ms 0ms 5s155ms Jul 13 00 14 0 1m11s 0ms 4s129ms 16m18s 01 6 0 2s263ms 0ms 1s182ms 6s238ms 02 5 0 1s323ms 0ms 1s284ms 1s415ms 03 5 0 2s543ms 0ms 1s181ms 5s206ms 04 12 0 3s436ms 2s779ms 3s963ms 7s824ms 05 57 0 2s854ms 3s944ms 5s128ms 29s234ms 06 30 0 3s39ms 3s933ms 5s101ms 9s117ms 07 31 0 3s792ms 4s91ms 7s935ms 15s544ms 08 19 0 3s703ms 3s919ms 4s7ms 11s893ms 09 13 0 3s55ms 1s87ms 2s362ms 19s207ms 10 9 0 2s272ms 0ms 1s217ms 7s599ms 11 7 0 4s117ms 0ms 3s137ms 9s282ms 12 9 0 2s853ms 0ms 1s334ms 14s440ms 13 4 0 1s977ms 0ms 1s174ms 4s82ms 14 6 0 3s517ms 0ms 1s349ms 10s410ms 15 6 0 3s890ms 0ms 1s278ms 14s221ms 16 11 0 3s308ms 3s925ms 3s975ms 4s330ms 17 10 0 1s902ms 0ms 1s926ms 4s253ms 18 3 25 14s185ms 1s259ms 48s591ms 1m18s 19 2 46 1m37s 1m19s 1m55s 24m 20 6 0 2s629ms 0ms 1s589ms 5s565ms 21 2 0 1s120ms 0ms 0ms 1s141ms 22 3 0 3s189ms 0ms 0ms 4s3ms 23 2 0 2s979ms 0ms 0ms 4s140ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 07 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 08 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 09 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 10 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 11 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 12 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 13 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jul 07 00 0 4 4.00 0.00% 01 0 7 7.00 0.00% 02 0 12 12.00 0.00% 03 0 7 7.00 0.00% 04 0 21 21.00 0.00% 05 0 51 51.00 0.00% 06 0 20 20.00 0.00% 07 0 9 9.00 0.00% 08 0 15 15.00 0.00% 09 0 39 39.00 0.00% 10 0 8 8.00 0.00% 11 0 8 8.00 0.00% 12 0 14 14.00 0.00% 13 0 2 2.00 0.00% 14 0 6 6.00 0.00% 15 0 6 6.00 0.00% 16 0 7 7.00 0.00% 17 0 4 4.00 0.00% 18 0 8 8.00 0.00% 19 0 6 6.00 0.00% 20 0 14 14.00 0.00% 21 0 19 19.00 0.00% 22 0 19 19.00 0.00% 23 0 8 8.00 0.00% Jul 08 00 0 4 4.00 0.00% 01 0 6 6.00 0.00% 02 0 6 6.00 0.00% 03 0 29 29.00 0.00% 04 0 5 5.00 0.00% 05 0 52 52.00 0.00% 06 0 6 6.00 0.00% 07 0 17 17.00 0.00% 08 0 16 16.00 0.00% 09 0 7 7.00 0.00% 10 0 13 13.00 0.00% 11 0 32 32.00 0.00% 12 0 2 2.00 0.00% 13 0 5 5.00 0.00% 14 0 5 5.00 0.00% 15 0 9 9.00 0.00% 16 0 7 7.00 0.00% 17 0 5 5.00 0.00% 18 0 2 2.00 0.00% 19 0 6 6.00 0.00% 20 0 3 3.00 0.00% 21 0 16 16.00 0.00% 22 0 11 11.00 0.00% 23 0 5 5.00 0.00% Jul 09 00 0 7 7.00 0.00% 01 0 23 23.00 0.00% 02 0 34 34.00 0.00% 03 0 13 13.00 0.00% 04 0 16 16.00 0.00% 05 0 37 37.00 0.00% 06 0 14 14.00 0.00% 07 0 6 6.00 0.00% 08 0 9 9.00 0.00% 09 0 10 10.00 0.00% 10 0 6 6.00 0.00% 11 0 14 14.00 0.00% 12 0 10 10.00 0.00% 13 0 13 13.00 0.00% 14 0 5 5.00 0.00% 15 0 6 6.00 0.00% 16 0 7 7.00 0.00% 17 0 10 10.00 0.00% 18 0 5 5.00 0.00% 19 0 6 6.00 0.00% 20 0 5 5.00 0.00% 21 0 10 10.00 0.00% 22 0 13 13.00 0.00% 23 0 17 17.00 0.00% Jul 10 00 0 4 4.00 0.00% 01 0 8 8.00 0.00% 02 0 26 26.00 0.00% 03 0 16 16.00 0.00% 04 0 17 17.00 0.00% 05 0 56 56.00 0.00% 06 0 25 25.00 0.00% 07 0 9 9.00 0.00% 08 0 12 12.00 0.00% 09 0 18 18.00 0.00% 10 0 30 30.00 0.00% 11 0 39 39.00 0.00% 12 0 16 16.00 0.00% 13 0 9 9.00 0.00% 14 0 15 15.00 0.00% 15 0 11 11.00 0.00% 16 0 8 8.00 0.00% 17 0 11 11.00 0.00% 18 0 7 7.00 0.00% 19 0 3 3.00 0.00% 20 0 28 28.00 0.00% 21 0 6 6.00 0.00% 22 0 13 13.00 0.00% 23 0 8 8.00 0.00% Jul 11 00 0 3 3.00 0.00% 01 0 7 7.00 0.00% 02 0 14 14.00 0.00% 03 0 26 26.00 0.00% 04 0 21 21.00 0.00% 05 0 46 46.00 0.00% 06 0 12 12.00 0.00% 07 0 20 20.00 0.00% 08 0 5 5.00 0.00% 09 0 5 5.00 0.00% 10 0 5 5.00 0.00% 11 0 5 5.00 0.00% 12 0 4 4.00 0.00% 13 0 27 27.00 0.00% 14 0 11 11.00 0.00% 15 0 7 7.00 0.00% 16 0 9 9.00 0.00% 17 0 0 0.00 0.00% 18 0 2 2.00 0.00% 19 0 9 9.00 0.00% 20 0 3 3.00 0.00% 21 0 36 36.00 0.00% 22 0 10 10.00 0.00% 23 0 11 11.00 0.00% Jul 12 00 0 12 12.00 0.00% 01 0 13 13.00 0.00% 02 0 12 12.00 0.00% 03 0 16 16.00 0.00% 04 0 25 25.00 0.00% 05 0 55 55.00 0.00% 06 0 37 37.00 0.00% 07 0 14 14.00 0.00% 08 0 18 18.00 0.00% 09 0 12 12.00 0.00% 10 0 9 9.00 0.00% 11 0 8 8.00 0.00% 12 0 24 24.00 0.00% 13 0 22 22.00 0.00% 14 0 5 5.00 0.00% 15 0 2 2.00 0.00% 16 0 7 7.00 0.00% 17 0 11 11.00 0.00% 18 0 2 2.00 0.00% 19 0 16 16.00 0.00% 20 0 5 5.00 0.00% 21 0 3 3.00 0.00% 22 0 9 9.00 0.00% 23 0 3 3.00 0.00% Jul 13 00 0 13 13.00 0.00% 01 0 6 6.00 0.00% 02 0 5 5.00 0.00% 03 0 5 5.00 0.00% 04 0 12 12.00 0.00% 05 0 61 61.00 0.00% 06 0 30 30.00 0.00% 07 0 31 31.00 0.00% 08 0 19 19.00 0.00% 09 0 13 13.00 0.00% 10 0 9 9.00 0.00% 11 0 7 7.00 0.00% 12 0 11 11.00 0.00% 13 0 4 4.00 0.00% 14 0 6 6.00 0.00% 15 0 6 6.00 0.00% 16 0 11 11.00 0.00% 17 0 10 10.00 0.00% 18 0 3 3.00 0.00% 19 0 2 2.00 0.00% 20 0 6 6.00 0.00% 21 0 2 2.00 0.00% 22 0 3 3.00 0.00% 23 0 2 2.00 0.00% Day Hour Count Average / Second Jul 07 00 82 0.02/s 01 78 0.02/s 02 78 0.02/s 03 92 0.03/s 04 81 0.02/s 05 95 0.03/s 06 84 0.02/s 07 74 0.02/s 08 78 0.02/s 09 152 0.04/s 10 85 0.02/s 11 78 0.02/s 12 78 0.02/s 13 80 0.02/s 14 79 0.02/s 15 77 0.02/s 16 77 0.02/s 17 76 0.02/s 18 81 0.02/s 19 68 0.02/s 20 80 0.02/s 21 75 0.02/s 22 78 0.02/s 23 78 0.02/s Jul 08 00 78 0.02/s 01 81 0.02/s 02 81 0.02/s 03 86 0.02/s 04 77 0.02/s 05 96 0.03/s 06 80 0.02/s 07 82 0.02/s 08 74 0.02/s 09 80 0.02/s 10 85 0.02/s 11 206 0.06/s 12 81 0.02/s 13 78 0.02/s 14 81 0.02/s 15 75 0.02/s 16 79 0.02/s 17 77 0.02/s 18 72 0.02/s 19 77 0.02/s 20 77 0.02/s 21 76 0.02/s 22 81 0.02/s 23 79 0.02/s Jul 09 00 83 0.02/s 01 94 0.03/s 02 84 0.02/s 03 83 0.02/s 04 79 0.02/s 05 87 0.02/s 06 81 0.02/s 07 76 0.02/s 08 80 0.02/s 09 75 0.02/s 10 74 0.02/s 11 78 0.02/s 12 78 0.02/s 13 75 0.02/s 14 92 0.03/s 15 77 0.02/s 16 70 0.02/s 17 74 0.02/s 18 80 0.02/s 19 75 0.02/s 20 78 0.02/s 21 75 0.02/s 22 83 0.02/s 23 82 0.02/s Jul 10 00 78 0.02/s 01 82 0.02/s 02 82 0.02/s 03 80 0.02/s 04 95 0.03/s 05 106 0.03/s 06 78 0.02/s 07 79 0.02/s 08 86 0.02/s 09 155 0.04/s 10 84 0.02/s 11 93 0.03/s 12 76 0.02/s 13 91 0.03/s 14 79 0.02/s 15 73 0.02/s 16 74 0.02/s 17 80 0.02/s 18 82 0.02/s 19 77 0.02/s 20 76 0.02/s 21 74 0.02/s 22 84 0.02/s 23 78 0.02/s Jul 11 00 78 0.02/s 01 73 0.02/s 02 81 0.02/s 03 111 0.03/s 04 81 0.02/s 05 89 0.02/s 06 80 0.02/s 07 98 0.03/s 08 78 0.02/s 09 80 0.02/s 10 78 0.02/s 11 81 0.02/s 12 76 0.02/s 13 92 0.03/s 14 75 0.02/s 15 72 0.02/s 16 78 0.02/s 17 74 0.02/s 18 81 0.02/s 19 81 0.02/s 20 74 0.02/s 21 95 0.03/s 22 78 0.02/s 23 77 0.02/s Jul 12 00 76 0.02/s 01 75 0.02/s 02 74 0.02/s 03 78 0.02/s 04 83 0.02/s 05 91 0.03/s 06 89 0.02/s 07 77 0.02/s 08 81 0.02/s 09 77 0.02/s 10 81 0.02/s 11 78 0.02/s 12 84 0.02/s 13 80 0.02/s 14 76 0.02/s 15 79 0.02/s 16 77 0.02/s 17 75 0.02/s 18 76 0.02/s 19 79 0.02/s 20 80 0.02/s 21 72 0.02/s 22 80 0.02/s 23 78 0.02/s Jul 13 00 79 0.02/s 01 77 0.02/s 02 81 0.02/s 03 78 0.02/s 04 85 0.02/s 05 88 0.02/s 06 79 0.02/s 07 79 0.02/s 08 75 0.02/s 09 80 0.02/s 10 76 0.02/s 11 75 0.02/s 12 66 0.02/s 13 76 0.02/s 14 80 0.02/s 15 77 0.02/s 16 80 0.02/s 17 77 0.02/s 18 83 0.02/s 19 78 0.02/s 20 76 0.02/s 21 72 0.02/s 22 83 0.02/s 23 75 0.02/s Day Hour Count Average Duration Average idle time Jul 07 00 82 29m34s 29m22s 01 78 31m16s 31m16s 02 78 31m36s 31m36s 03 92 27m 27m 04 81 29m17s 29m16s 05 95 25m27s 25m25s 06 84 28m2s 28m 07 74 32m34s 32m33s 08 78 31m57s 31m57s 09 152 15m39s 15m38s 10 85 28m11s 28m10s 11 78 30m53s 30m53s 12 78 31m32s 31m31s 13 80 30m8s 30m8s 14 79 30m51s 30m49s 15 77 31m20s 31m20s 16 77 31m22s 31m22s 17 76 31m10s 31m10s 18 81 30m24s 30m22s 19 68 31m32s 31m32s 20 80 30m27s 30m27s 21 75 29m48s 29m47s 22 78 30m36s 30m35s 23 78 32m11s 32m11s Jul 08 00 78 30m2s 29m49s 01 81 29m33s 29m32s 02 81 30m59s 30m33s 03 86 27m55s 27m55s 04 77 31m26s 31m26s 05 96 25m17s 25m16s 06 80 29m5s 29m4s 07 82 30m49s 30m41s 08 74 31m15s 31m14s 09 80 30m19s 30m19s 10 85 28m57s 28m56s 11 206 11m20s 11m19s 12 81 30m37s 30m37s 13 78 31m3s 31m2s 14 81 30m22s 30m20s 15 75 31m53s 31m53s 16 79 30m37s 30m36s 17 77 31m51s 31m50s 18 72 31m7s 31m6s 19 77 31m3s 31m3s 20 77 31m31s 31m31s 21 76 29m46s 29m45s 22 81 29m9s 29m8s 23 79 30m32s 30m32s Jul 09 00 83 29m19s 29m7s 01 93 26m52s 26m52s 02 85 26m45s 26m27s 03 83 30m44s 30m44s 04 79 31m24s 31m22s 05 87 27m15s 27m14s 06 81 28m43s 28m41s 07 76 31m9s 31m9s 08 80 30m31s 30m30s 09 75 32m44s 32m43s 10 74 31m20s 31m19s 11 78 33m34s 33m33s 12 78 30m8s 30m7s 13 75 30m57s 30m56s 14 92 26m50s 26m49s 15 77 30m40s 30m39s 16 70 30m50s 30m50s 17 74 31m17s 31m17s 18 80 31m28s 31m26s 19 75 31m46s 31m46s 20 78 31m29s 31m29s 21 75 30m35s 30m34s 22 83 29m45s 29m45s 23 82 29m58s 29m57s Jul 10 00 78 31m5s 30m52s 01 82 29m32s 29m32s 02 82 29m46s 29m42s 03 80 30m11s 30m10s 04 94 25m35s 25m34s 05 106 23m3s 22m27s 06 79 29m41s 29m32s 07 79 31m21s 31m21s 08 86 28m5s 28m5s 09 152 16m3s 16m3s 10 84 28m24s 28m22s 11 93 27m21s 27m19s 12 76 31m39s 31m38s 13 91 27m11s 27m11s 14 79 30m3s 30m1s 15 73 30m52s 30m52s 16 74 30m36s 30m36s 17 80 30m28s 30m25s 18 85 46m37s 46m36s 19 77 30m34s 30m34s 20 76 31m8s 31m7s 21 74 30m22s 30m22s 22 84 28m26s 28m26s 23 78 31m8s 31m8s Jul 11 00 78 31m7s 30m55s 01 73 31m17s 31m17s 02 81 31m29s 31m26s 03 110 21m55s 21m54s 04 82 30m51s 30m13s 05 89 26m5s 26m4s 06 80 29m52s 29m51s 07 98 25m43s 25m43s 08 78 31m18s 31m17s 09 79 30m45s 30m38s 10 78 31m1s 30m59s 11 81 29m55s 29m55s 12 76 31m44s 31m44s 13 92 26m43s 26m43s 14 75 30m31s 30m29s 15 72 31m52s 31m51s 16 78 31m 30m59s 17 74 32m19s 32m19s 18 81 30m21s 30m19s 19 81 29m47s 29m46s 20 75 39m35s 39m35s 21 95 26m30s 26m28s 22 78 30m2s 30m1s 23 77 31m33s 31m32s Jul 12 00 76 30m58s 30m45s 01 75 31m47s 31m47s 02 74 31m26s 31m25s 03 78 31m20s 31m19s 04 83 29m42s 29m41s 05 91 25m34s 25m32s 06 89 27m8s 27m6s 07 77 31m10s 31m9s 08 81 29m57s 29m57s 09 77 30m49s 30m48s 10 81 31m2s 31m1s 11 78 30m58s 30m58s 12 82 30m11s 29m49s 13 82 28m9s 27m43s 14 76 30m39s 30m37s 15 79 31m25s 31m25s 16 77 31m6s 31m6s 17 75 32m10s 32m10s 18 76 31m26s 31m25s 19 79 30m56s 30m55s 20 80 29m45s 29m45s 21 72 31m2s 31m2s 22 80 30m21s 30m21s 23 78 30m48s 30m48s Jul 13 00 79 30m34s 30m21s 01 77 31m 31m 02 81 30m 29m59s 03 78 31m8s 31m7s 04 85 29m1s 29m 05 88 26m45s 26m43s 06 79 31m6s 31m5s 07 79 31m1s 31m 08 75 31m12s 31m11s 09 80 30m59s 30m59s 10 76 31m30s 31m29s 11 75 32m7s 32m6s 12 66 31m15s 31m15s 13 76 32m44s 32m44s 14 80 30m19s 30m19s 15 77 31m25s 31m25s 16 80 30m48s 30m48s 17 77 31m6s 31m6s 18 82 29m50s 29m46s 19 79 32m15s 31m16s 20 76 31m32s 31m32s 21 72 31m12s 31m12s 22 83 29m17s 29m17s 23 75 31m20s 31m20s -
Connections
Established Connections
Key values
- 35 connections Connection Peak
- 2024-07-10 09:19:48 Date
Connections per database
Key values
- ctdprd51 Main Database
- 13,710 connections Total
Connections per user
Key values
- pubeu Main User
- 13,710 connections Total
-
Sessions
Simultaneous sessions
Key values
- 52 sessions Session Peak
- 2024-07-11 03:23:51 Date
Histogram of session times
Key values
- 12,300 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 13,710 sessions Total
Sessions per user
Key values
- pubeu Main User
- 13,710 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 13,710 sessions Total
Host Count Total Duration Average Duration 10.12.5.37 3,153 56d7h13m4s 25m42s 10.12.5.38 2,625 55d23h38m56s 30m42s 10.12.5.39 2,578 56d17m56s 31m17s 10.12.5.40 1 2m43s 2m43s 10.12.5.45 2,666 55d23h54m5s 30m14s 10.12.5.46 2,632 56d1h16m50s 30m40s 192.168.201.10 3 1d39m40s 8h13m13s 192.168.201.6 1 10h52m53s 10h52m53s ::1 51 2h10m33s 2m33s -
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 157,577 buffers Checkpoint Peak
- 2024-07-10 23:04:24 Date
- 1620.041 seconds Highest write time
- 0.003 seconds Sync time
Checkpoints Wal files
Key values
- 60 files Wal files usage Peak
- 2024-07-11 22:34:28 Date
Checkpoints distance
Key values
- 1,805.94 Mo Distance Peak
- 2024-07-11 22:34:28 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jul 07 00 670 67.317s 0.003s 67.389s 01 1,265 126.928s 0.003s 127.01s 02 181 18.321s 0.002s 18.353s 03 148 15.011s 0.002s 15.042s 04 228 22.945s 0.002s 22.975s 05 173 17.516s 0.002s 17.547s 06 7,012 702.58s 0.004s 702.662s 07 1,331 133.551s 0.003s 133.633s 08 472 47.478s 0.002s 47.508s 09 145 14.71s 0.002s 14.741s 10 240 24.232s 0.002s 24.261s 11 347 34.96s 0.002s 34.99s 12 1,238 124.23s 0.003s 124.261s 13 191 19.215s 0.003s 19.248s 14 6,382 639.24s 0.004s 639.322s 15 2,222 222.78s 0.003s 222.862s 16 200 20.229s 0.002s 20.259s 17 108 10.993s 0.002s 11.023s 18 125 12.7s 0.002s 12.731s 19 176 17.818s 0.002s 17.847s 20 122 12.403s 0.002s 12.434s 21 2,465 247.09s 0.003s 247.136s 22 5,140 514.862s 0.003s 514.97s 23 500 50.282s 0.002s 50.315s Jul 08 00 279 28.046s 0.001s 28.112s 01 62,674 2,171.971s 0.005s 2,172.519s 02 127 12.905s 0.002s 12.936s 03 7,341 735.023s 0.003s 735.182s 04 1,845 185.046s 0.003s 185.13s 05 205 20.728s 0.002s 20.759s 06 1,142 114.617s 0.002s 114.699s 07 399 40.163s 0.003s 40.193s 08 593 59.601s 0.003s 59.631s 09 2,901 290.648s 0.002s 290.678s 10 65,607 1,672.791s 0.005s 1,673.404s 11 1,875 187.85s 0.003s 187.934s 12 198 20.024s 0.002s 20.054s 13 352 35.455s 0.003s 35.485s 14 2,972 297.764s 0.003s 297.821s 15 187 18.909s 0.002s 18.939s 16 414 41.663s 0.002s 41.695s 17 178 18.017s 0.002s 18.049s 18 275 27.724s 0.003s 27.757s 19 136 13.799s 0.002s 13.828s 20 122 12.412s 0.002s 12.497s 21 198 20.015s 0.002s 20.045s 22 2,525 253.123s 0.003s 253.189s 23 7,060 707.367s 0.003s 707.448s Jul 09 00 811 81.357s 0.002s 81.373s 01 67,050 1,640.481s 0.004s 1,640.876s 02 8,345 836.202s 0.004s 836.523s 03 129,526 1,619.076s 0.002s 1,619.529s 04 51,516 1,823.219s 0.005s 1,823.375s 05 1,457 146.157s 0.003s 146.188s 06 605 60.82s 0.004s 60.851s 07 603 60.632s 0.003s 60.665s 08 2,499 250.585s 0.002s 250.676s 09 219 22.025s 0.002s 22.055s 10 10,526 1,054.198s 0.004s 1,054.348s 11 4,658 466.895s 0.002s 466.986s 12 60 6.099s 0.001s 6.115s 13 27,770 1,773.71s 0.005s 1,773.888s 14 104 10.6s 0.002s 10.631s 15 191 19.33s 0.003s 19.36s 16 293 29.542s 0.002s 29.571s 17 425 42.775s 0.003s 42.806s 18 331 33.35s 0.002s 33.381s 19 115 11.694s 0.002s 11.725s 20 104 10.602s 0.002s 10.634s 21 3,373 338.106s 0.003s 338.196s 22 5,876 588.644s 0.003s 588.713s 23 11,488 1,150.738s 0.004s 1,150.921s Jul 10 00 1,810 181.528s 0.004s 181.561s 01 166 16.804s 0.002s 16.834s 02 9,622 963.831s 0.003s 963.969s 03 239 24.143s 0.002s 24.22s 04 416 41.789s 0.002s 41.804s 05 52,272 2,351.46s 0.005s 2,351.94s 06 3,778 378.778s 0.004s 378.847s 07 3,464 347.062s 0.003s 347.141s 08 672 67.521s 0.003s 67.551s 09 478 48.103s 0.003s 48.134s 10 320 32.248s 0.002s 32.278s 11 1,608 161.314s 0.004s 161.393s 12 2,233 223.876s 0.003s 223.95s 13 128 13.005s 0.002s 13.035s 14 128 13.008s 0.002s 13.037s 15 1,008 101.177s 0.003s 101.208s 16 393 39.565s 0.002s 39.595s 17 79,780 1,619.13s 0.001s 1,619.646s 18 532 53.485s 0.003s 53.517s 19 49,658 1,624.409s 0.003s 1,624.867s 20 165 16.728s 0.002s 16.759s 21 260 26.235s 0.002s 26.266s 22 80 8.102s 0.001s 8.118s 23 157,707 1,632.431s 0.004s 1,632.926s Jul 11 00 697 70.095s 0.005s 70.167s 01 144 14.608s 0.002s 14.639s 02 154 15.612s 0.002s 15.644s 03 103 10.407s 0.001s 10.423s 04 67,801 3,317.681s 0.006s 3,318.255s 05 562 56.495s 0.003s 56.526s 06 5,828 583.912s 0.004s 583.993s 07 5,159 516.873s 0.004s 516.961s 08 5,936 594.537s 0.004s 594.617s 09 910 91.341s 0.004s 91.374s 10 380 38.258s 0.002s 38.29s 11 105 10.696s 0.002s 10.728s 12 101 10.296s 0.002s 10.372s 13 356 35.877s 0.002s 35.908s 14 368 36.971s 0.003s 37.002s 15 216 21.816s 0.002s 21.845s 16 428 43.07s 0.002s 43.101s 17 777 78.039s 0.003s 78.069s 18 205 20.719s 0.002s 20.749s 19 79 8.094s 0.002s 8.126s 20 85 8.691s 0.002s 8.722s 21 89 9.097s 0.002s 9.128s 22 88,881 2,063.574s 0.004s 2,064.408s 23 54,005 1,623.701s 0.003s 1,624.16s Jul 12 00 718 72.121s 0.003s 72.201s 01 330 33.24s 0.002s 33.27s 02 3,013 301.952s 0.003s 302.027s 03 437 43.96s 0.002s 43.99s 04 1,177 118.024s 0.002s 118.087s 05 81,176 1,625.35s 0.003s 1,625.81s 06 50,248 1,661.503s 0.004s 1,662.027s 07 512 51.49s 0.003s 51.522s 08 412 41.461s 0.002s 41.492s 09 282 28.44s 0.002s 28.47s 10 5,754 576.252s 0.003s 576.334s 11 103 10.514s 0.002s 10.546s 12 330 33.248s 0.002s 33.278s 13 273 27.551s 0.002s 27.58s 14 139 14.105s 0.002s 14.136s 15 248 25.026s 0.002s 25.056s 16 348 35.053s 0.002s 35.084s 17 309 31.142s 0.002s 31.172s 18 109 11.104s 0.002s 11.134s 19 165 16.716s 0.002s 16.748s 20 152 15.404s 0.002s 15.435s 21 71 7.296s 0.002s 7.324s 22 86 8.795s 0.002s 8.826s 23 474 47.674s 0.003s 47.706s Jul 13 00 3,483 349.159s 0.004s 349.293s 01 242 24.428s 0.002s 24.458s 02 325 32.751s 0.002s 32.781s 03 158 16.009s 0.002s 16.039s 04 130 13.204s 0.002s 13.236s 05 287 28.952s 0.002s 28.983s 06 269 27.041s 0.002s 27.07s 07 187 18.917s 0.002s 18.948s 08 134 13.594s 0.002s 13.624s 09 1,304 130.853s 0.003s 130.93s 10 6,063 607.61s 0.003s 607.709s 11 158 16.007s 0.002s 16.037s 12 78 7.987s 0.002s 8.016s 13 97 9.896s 0.002s 9.928s 14 211 21.324s 0.002s 21.354s 15 90 9.193s 0.002s 9.223s 16 109 11.098s 0.002s 11.128s 17 89 9.097s 0.002s 9.127s 18 198 20.021s 0.002s 20.055s 19 91 9.298s 0.002s 9.329s 20 84,311 1,622.853s 0.003s 1,622.883s 21 83 8.494s 0.002s 8.526s 22 198 20.018s 0.002s 20.047s 23 106 10.804s 0.002s 10.836s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jul 07 00 0 0 0 67 0.001s 0.002s 01 0 0 1 35 0.001s 0.002s 02 0 0 0 27 0.001s 0.002s 03 0 0 0 28 0.001s 0.002s 04 0 0 0 37 0.001s 0.002s 05 0 0 0 30 0.001s 0.002s 06 0 0 4 108 0.001s 0.002s 07 0 0 1 147 0.001s 0.002s 08 0 0 0 119 0.001s 0.002s 09 0 0 0 24 0.001s 0.002s 10 0 0 0 30 0.001s 0.002s 11 0 0 0 116 0.001s 0.002s 12 0 0 0 76 0.001s 0.002s 13 0 0 0 29 0.001s 0.002s 14 0 0 4 48 0.001s 0.002s 15 0 0 1 40 0.001s 0.002s 16 0 0 0 28 0.001s 0.002s 17 0 0 0 20 0.001s 0.002s 18 0 0 0 20 0.001s 0.002s 19 0 0 0 29 0.001s 0.002s 20 0 0 0 21 0.001s 0.002s 21 0 0 1 32 0.001s 0.002s 22 0 0 3 44 0.001s 0.002s 23 0 0 0 30 0.001s 0.002s Jul 08 00 0 0 1 23 0.001s 0.001s 01 0 0 38 99 0.001s 0.003s 02 0 0 0 22 0.001s 0.002s 03 0 0 4 54 0.001s 0.002s 04 0 0 1 48 0.001s 0.002s 05 0 0 0 35 0.001s 0.002s 06 0 0 1 140 0.001s 0.002s 07 0 0 0 126 0.001s 0.002s 08 0 0 0 79 0.001s 0.002s 09 0 0 1 30 0.001s 0.001s 10 0 0 44 281 0.001s 0.003s 11 0 0 1 175 0.001s 0.002s 12 0 0 0 27 0.001s 0.002s 13 0 0 0 79 0.001s 0.002s 14 0 0 2 88 0.001s 0.002s 15 0 0 0 68 0.001s 0.002s 16 0 0 0 86 0.001s 0.002s 17 0 0 0 67 0.001s 0.002s 18 0 0 0 27 0.001s 0.002s 19 0 0 0 19 0.001s 0.002s 20 0 0 1 20 0.001s 0.002s 21 0 0 0 30 0.001s 0.002s 22 0 2 2 34 0.001s 0.002s 23 0 0 1 46 0.001s 0.002s Jul 09 00 0 0 0 36 0.001s 0.001s 01 0 0 26 108 0.001s 0.003s 02 0 29 8 65 0.001s 0.002s 03 0 0 34 35 0.001s 0.001s 04 0 0 3 77 0.001s 0.003s 05 0 0 0 40 0.001s 0.002s 06 0 0 0 132 0.001s 0.002s 07 0 0 0 144 0.001s 0.002s 08 0 0 2 143 0.001s 0.002s 09 0 0 0 30 0.001s 0.002s 10 0 0 7 42 0.001s 0.002s 11 0 0 2 41 0.001s 0.002s 12 0 0 0 10 0.001s 0.001s 13 0 0 8 68 0.001s 0.003s 14 0 0 0 20 0.001s 0.002s 15 0 0 0 62 0.001s 0.002s 16 0 0 0 111 0.001s 0.002s 17 0 0 0 125 0.001s 0.002s 18 0 0 0 119 0.001s 0.002s 19 0 0 0 19 0.001s 0.002s 20 0 0 0 19 0.001s 0.002s 21 0 0 2 32 0.001s 0.002s 22 0 0 3 41 0.001s 0.002s 23 0 0 7 47 0.001s 0.002s Jul 10 00 0 0 0 80 0.001s 0.002s 01 0 0 0 27 0.001s 0.002s 02 0 0 6 48 0.001s 0.002s 03 0 0 1 40 0.001s 0.002s 04 0 0 0 32 0.001s 0.001s 05 0 0 34 128 0.001s 0.003s 06 0 0 3 159 0.001s 0.002s 07 0 0 1 137 0.001s 0.002s 08 0 0 0 154 0.001s 0.002s 09 0 0 0 126 0.001s 0.002s 10 0 0 0 112 0.001s 0.002s 11 0 0 1 138 0.001s 0.002s 12 0 0 1 86 0.001s 0.002s 13 0 0 0 20 0.001s 0.002s 14 0 0 0 27 0.001s 0.002s 15 0 0 0 125 0.001s 0.002s 16 0 0 0 119 0.001s 0.002s 17 0 0 39 29 0.001s 0.001s 18 0 0 0 36 0.001s 0.002s 19 0 0 33 34 0.001s 0.002s 20 0 0 0 28 0.001s 0.002s 21 0 0 0 24 0.001s 0.002s 22 0 0 0 11 0.001s 0.001s 23 0 0 35 56 0.001s 0.003s Jul 11 00 0 0 0 76 0.001s 0.002s 01 0 0 0 29 0.001s 0.002s 02 0 0 0 28 0.001s 0.002s 03 0 0 0 18 0.001s 0.001s 04 0 0 39 100 0.001s 0.003s 05 0 0 0 45 0.001s 0.002s 06 0 0 4 141 0.001s 0.002s 07 0 0 2 144 0.002s 0.002s 08 0 0 4 112 0.001s 0.002s 09 0 0 0 35 0.001s 0.002s 10 0 0 0 129 0.001s 0.002s 11 0 0 0 25 0.001s 0.002s 12 0 0 1 20 0.001s 0.002s 13 0 0 0 69 0.001s 0.002s 14 0 0 0 127 0.001s 0.002s 15 0 0 0 27 0.001s 0.002s 16 0 0 0 89 0.001s 0.002s 17 0 0 0 140 0.001s 0.002s 18 0 0 0 72 0.001s 0.002s 19 0 0 0 20 0.001s 0.002s 20 0 0 0 19 0.001s 0.002s 21 0 0 0 19 0.001s 0.002s 22 0 0 62 53 0.001s 0.002s 23 0 0 33 42 0.001s 0.002s Jul 12 00 0 0 1 80 0.001s 0.002s 01 0 0 0 34 0.001s 0.002s 02 0 0 1 46 0.001s 0.002s 03 0 0 0 40 0.001s 0.002s 04 0 0 1 34 0.001s 0.001s 05 0 0 33 42 0.001s 0.002s 06 0 0 34 160 0.001s 0.003s 07 0 0 0 118 0.001s 0.002s 08 0 0 0 119 0.001s 0.002s 09 0 0 0 73 0.001s 0.002s 10 0 0 4 87 0.001s 0.002s 11 0 0 0 23 0.001s 0.002s 12 0 0 0 109 0.001s 0.002s 13 0 0 0 115 0.001s 0.002s 14 0 0 0 24 0.001s 0.002s 15 0 0 0 73 0.001s 0.002s 16 0 0 0 113 0.001s 0.002s 17 0 0 0 115 0.001s 0.002s 18 0 0 0 24 0.001s 0.002s 19 0 0 0 29 0.001s 0.002s 20 0 0 0 22 0.001s 0.002s 21 0 0 0 19 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 0 0 30 0.001s 0.002s Jul 13 00 0 0 2 97 0.001s 0.002s 01 0 0 0 30 0.001s 0.002s 02 0 0 0 44 0.001s 0.002s 03 0 0 0 30 0.001s 0.002s 04 0 0 0 28 0.001s 0.002s 05 0 0 0 31 0.001s 0.002s 06 0 0 0 38 0.001s 0.002s 07 0 0 0 31 0.001s 0.002s 08 0 0 0 29 0.001s 0.002s 09 0 0 1 31 0.001s 0.002s 10 0 0 3 34 0.001s 0.002s 11 0 0 0 28 0.001s 0.002s 12 0 0 0 19 0.001s 0.002s 13 0 0 0 20 0.001s 0.002s 14 0 0 0 32 0.001s 0.002s 15 0 0 0 21 0.001s 0.002s 16 0 0 0 22 0.001s 0.002s 17 0 0 0 20 0.001s 0.002s 18 0 0 0 35 0.001s 0.002s 19 0 0 0 18 0.001s 0.002s 20 0 0 0 27 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 32 0.001s 0.002s 23 0 0 0 21 0.001s 0.002s Day Hour Count Avg time (sec) Jul 07 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 08 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 09 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 10 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 11 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 12 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 13 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jul 07 00 1,687.50 kB 23,113.50 kB 01 4,320.50 kB 19,621.50 kB 02 152.50 kB 15,931.00 kB 03 174.50 kB 12,936.00 kB 04 336.00 kB 10,529.50 kB 05 232.50 kB 8,571.00 kB 06 33,403.00 kB 55,143.00 kB 07 3,906.00 kB 45,781.50 kB 08 1,415.50 kB 37,334.50 kB 09 120.00 kB 30,318.50 kB 10 335.50 kB 24,622.00 kB 11 858.50 kB 20,075.50 kB 12 3,859.00 kB 17,027.00 kB 13 307.50 kB 13,849.00 kB 14 31,398.50 kB 53,952.00 kB 15 7,327.50 kB 45,373.00 kB 16 326.50 kB 36,813.50 kB 17 118.00 kB 29,842.00 kB 18 137.50 kB 24,198.50 kB 19 338.00 kB 19,645.50 kB 20 142.00 kB 15,958.50 kB 21 8,568.00 kB 15,324.00 kB 22 24,651.00 kB 32,084.00 kB 23 1,231.50 kB 41,944.50 kB Jul 08 00 1,776.00 kB 35,950.00 kB 01 211,813.33 kB 525,438.00 kB 02 46.00 kB 404,491.00 kB 03 33,530.00 kB 332,153.50 kB 04 6,539.00 kB 271,572.50 kB 05 285.50 kB 220,577.00 kB 06 3,253.50 kB 179,281.00 kB 07 1,019.50 kB 145,403.00 kB 08 1,803.50 kB 118,037.00 kB 09 20,737.00 kB 102,839.00 kB 10 238,567.67 kB 644,142.00 kB 11 6,977.50 kB 495,301.50 kB 12 334.00 kB 401,263.50 kB 13 952.50 kB 325,128.00 kB 14 18,310.50 kB 265,283.00 kB 15 303.00 kB 216,546.50 kB 16 991.00 kB 175,549.50 kB 17 359.00 kB 142,320.00 kB 18 174.50 kB 115,314.50 kB 19 110.00 kB 93,424.00 kB 20 125.50 kB 75,696.50 kB 21 390.00 kB 61,387.50 kB 22 9,662.00 kB 50,708.50 kB 23 33,314.00 kB 63,118.50 kB Jul 09 00 4,988.00 kB 54,325.00 kB 01 142,689.33 kB 386,078.00 kB 02 39,619.50 kB 300,750.00 kB 03 563,117.00 kB 563,117.00 kB 04 186,185.00 kB 507,856.33 kB 05 4,352.50 kB 390,608.00 kB 06 1,372.50 kB 316,600.00 kB 07 1,630.50 kB 256,757.50 kB 08 9,072.50 kB 208,985.00 kB 09 410.00 kB 170,101.00 kB 10 56,889.00 kB 143,509.50 kB 11 22,610.00 kB 123,638.50 kB 12 112.00 kB 107,543.00 kB 13 41,969.67 kB 103,464.67 kB 14 128.50 kB 79,694.00 kB 15 330.00 kB 64,596.50 kB 16 670.50 kB 52,440.50 kB 17 995.00 kB 42,637.00 kB 18 787.00 kB 34,721.00 kB 19 93.00 kB 28,164.50 kB 20 111.50 kB 22,835.50 kB 21 15,213.50 kB 28,767.00 kB 22 25,717.00 kB 48,053.00 kB 23 53,682.00 kB 61,111.50 kB Jul 10 00 2,389.50 kB 51,903.50 kB 01 211.00 kB 42,174.00 kB 02 50,954.50 kB 68,775.00 kB 03 456.00 kB 86,893.00 kB 04 2,094.00 kB 74,319.00 kB 05 186,915.67 kB 448,201.33 kB 06 12,430.50 kB 347,381.50 kB 07 17,419.00 kB 285,374.50 kB 08 2,009.50 kB 231,491.50 kB 09 1,402.00 kB 187,801.00 kB 10 767.50 kB 152,300.00 kB 11 5,736.50 kB 124,440.00 kB 12 7,746.50 kB 101,670.50 kB 13 170.50 kB 83,024.50 kB 14 168.50 kB 67,282.50 kB 15 2,829.50 kB 54,839.50 kB 16 1,043.00 kB 44,777.50 kB 17 631,475.00 kB 631,475.00 kB 18 1,236.50 kB 540,138.50 kB 19 273,015.50 kB 518,637.50 kB 20 336.50 kB 420,139.50 kB 21 374.00 kB 340,402.50 kB 22 159.00 kB 290,261.00 kB 23 189,965.33 kB 514,440.33 kB Jul 11 00 2,028.50 kB 394,736.50 kB 01 184.00 kB 319,837.00 kB 02 181.00 kB 259,103.00 kB 03 350.00 kB 220,956.00 kB 04 210,739.33 kB 496,663.00 kB 05 1,398.00 kB 383,740.50 kB 06 30,066.50 kB 313,910.50 kB 07 20,434.00 kB 260,720.00 kB 08 30,564.00 kB 214,391.50 kB 09 2,695.00 kB 176,601.00 kB 10 923.50 kB 143,416.00 kB 11 137.00 kB 116,228.50 kB 12 89.50 kB 94,164.00 kB 13 962.00 kB 76,378.50 kB 14 940.00 kB 62,103.00 kB 15 587.50 kB 50,390.50 kB 16 1,090.00 kB 41,051.50 kB 17 2,336.50 kB 33,667.00 kB 18 552.50 kB 27,420.00 kB 19 114.50 kB 22,231.00 kB 20 118.50 kB 18,029.50 kB 21 117.50 kB 14,627.00 kB 22 485,054.50 kB 880,683.50 kB 23 293,482.00 kB 771,153.00 kB Jul 12 00 2,124.00 kB 624,974.50 kB 01 630.50 kB 506,407.00 kB 02 10,568.00 kB 411,275.00 kB 03 1,533.00 kB 334,297.50 kB 04 7,880.00 kB 285,886.00 kB 05 273,323.50 kB 519,240.50 kB 06 182,969.67 kB 494,354.33 kB 07 1,416.00 kB 379,279.00 kB 08 1,083.00 kB 307,453.50 kB 09 664.00 kB 249,158.50 kB 10 29,652.00 kB 207,485.00 kB 11 140.00 kB 168,091.50 kB 12 783.50 kB 136,265.00 kB 13 564.00 kB 110,497.00 kB 14 144.00 kB 89,553.50 kB 15 546.00 kB 72,604.00 kB 16 983.50 kB 58,983.50 kB 17 836.00 kB 47,958.50 kB 18 129.50 kB 38,898.00 kB 19 328.00 kB 31,550.00 kB 20 178.00 kB 25,607.50 kB 21 101.50 kB 20,762.50 kB 22 116.50 kB 16,839.00 kB 23 1,149.50 kB 13,858.50 kB Jul 13 00 11,960.00 kB 14,920.50 kB 01 538.00 kB 14,946.50 kB 02 900.50 kB 12,261.00 kB 03 222.00 kB 9,989.00 kB 04 212.00 kB 8,131.00 kB 05 254.50 kB 6,631.50 kB 06 802.50 kB 5,524.00 kB 07 301.50 kB 4,531.50 kB 08 260.50 kB 3,707.00 kB 09 3,785.50 kB 5,332.50 kB 10 24,192.00 kB 27,519.50 kB 11 279.00 kB 41,348.50 kB 12 100.50 kB 33,511.00 kB 13 106.00 kB 27,163.50 kB 14 481.50 kB 22,078.50 kB 15 79.00 kB 17,915.50 kB 16 139.50 kB 14,533.50 kB 17 91.00 kB 11,792.50 kB 18 362.00 kB 9,599.50 kB 19 102.50 kB 7,817.00 kB 20 140.50 kB 6,355.50 kB 21 109.50 kB 5,172.00 kB 22 369.00 kB 4,256.50 kB 23 152.00 kB 3,477.00 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jul 07 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 08 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 09 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 10 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 11 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 12 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 13 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 24.57 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2024-07-10 22:22:55 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 24.57 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2024-07-10 22:22:55 Date
Analyzes per table
Key values
- pubc.log_query (116) Main table analyzed (database ctdprd51)
- 132 analyzes Total
Vacuums per table
Key values
- pubc.log_query (13) Main table vacuumed on database ctdprd51
- 25 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 13 11 3,715 0 765 0 0 1,223 438 3,061,026 ctdprd51.pg_toast.pg_toast_486223 3 0 126 0 4 0 0 4 1 8,820 ctdprd51.pg_catalog.pg_statistic 2 2 1,436 0 289 0 26 915 266 1,224,319 ctdprd51.pub2.term_set_enrichment 2 0 9,681 0 4,117 0 0 4,734 4 306,304 ctdprd51.pub2.term_set_enrichment_agent 2 0 446,633 0 180,470 0 0 223,095 9 13,236,822 ctdprd51.pg_toast.pg_toast_2619 1 1 3,766 0 1,018 0 10,006 3,178 994 485,308 ctdprd51.pub2.term_comp 1 0 179 0 21 0 0 17 2 14,502 ctdprd51.pub2.term_comp_agent 1 0 180 0 34 0 0 45 2 14,722 Total 25 14 465,716 337 186,718 0 10,032 233,211 1,716 18,351,823 Tuples removed per table
Key values
- pg_toast.pg_toast_2619 (4031) Main table with removed tuples on database ctdprd51
- 4945 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_toast.pg_toast_2619 1 1 4,031 18,956 0 0 12,592 ctdprd51.pg_catalog.pg_statistic 2 2 780 4,760 0 0 580 ctdprd51.pubc.log_query 13 11 134 16,266 23 0 685 ctdprd51.pub2.term_set_enrichment 2 0 0 1,385,150 0 0 22,946 ctdprd51.pg_toast.pg_toast_486223 3 0 0 3 0 0 1 ctdprd51.pub2.term_comp 1 0 0 3,839 0 0 37 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 99,018,918 0 0 1,125,216 ctdprd51.pub2.term_comp_agent 1 0 0 83,435 0 0 702 Total 25 14 4,945 100,531,327 23 0 1,162,759 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pg_catalog.pg_statistic 2 2 780 0 ctdprd51.pg_toast.pg_toast_2619 1 1 4031 0 ctdprd51.pubc.log_query 13 11 134 0 ctdprd51.pub2.term_set_enrichment 2 0 0 0 ctdprd51.pg_toast.pg_toast_486223 3 0 0 0 ctdprd51.pub2.term_comp 1 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 Total 25 14 4,945 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jul 07 00 0 1 01 0 1 02 0 1 03 0 2 04 0 1 05 0 4 06 0 1 07 0 1 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 0 0 14 0 0 15 0 1 16 0 0 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 1 23 0 0 Jul 08 00 0 1 01 0 1 02 0 1 03 0 2 04 0 1 05 0 3 06 0 1 07 0 0 08 0 1 09 0 1 10 0 1 11 0 2 12 0 0 13 0 1 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 0 20 0 1 21 0 0 22 0 1 23 0 0 Jul 09 00 0 2 01 0 1 02 0 2 03 0 2 04 0 2 05 0 3 06 0 1 07 0 1 08 0 1 09 0 1 10 0 0 11 0 1 12 0 1 13 0 1 14 0 0 15 0 0 16 0 0 17 0 1 18 0 0 19 0 0 20 0 0 21 0 0 22 0 1 23 0 0 Jul 10 00 0 2 01 0 1 02 0 2 03 0 2 04 0 2 05 0 3 06 0 1 07 0 1 08 0 0 09 0 1 10 0 2 11 0 0 12 0 1 13 0 0 14 0 0 15 0 1 16 0 1 17 0 0 18 0 0 19 0 0 20 0 1 21 0 0 22 0 1 23 0 0 Jul 11 00 0 0 01 0 2 02 0 1 03 0 2 04 0 2 05 0 3 06 0 0 07 0 1 08 0 1 09 0 0 10 0 1 11 0 0 12 0 0 13 0 2 14 0 0 15 0 1 16 0 1 17 0 0 18 0 0 19 0 0 20 0 0 21 0 1 22 0 1 23 0 1 Jul 12 00 0 1 01 0 1 02 0 2 03 0 1 04 0 2 05 0 3 06 0 1 07 0 1 08 0 0 09 0 0 10 0 1 11 0 0 12 0 1 13 0 0 14 0 0 15 0 1 16 0 0 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 0 23 0 0 Jul 13 00 0 1 01 0 1 02 0 2 03 0 1 04 0 0 05 0 4 06 0 1 07 0 0 08 0 1 09 0 0 10 0 1 11 0 0 12 0 0 13 0 1 14 0 0 15 0 0 16 0 0 17 0 0 18 0 1 19 0 0 20 0 0 21 0 0 22 0 1 23 0 0 - 24.57 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 2,096 Total read queries
- 338 Total write queries
Queries by database
Key values
- unknown Main database
- 1,285 Requests
- 6h43m37s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 3,036 Requests
User Request type Count Duration load Total 4 39s355ms select 4 39s355ms postgres Total 108 41m57s copy to 108 41m57s pubeu Total 2,401 6h35m10s cte 30 1m31s select 2,371 6h33m39s qaeu Total 80 3m40s cte 17 56s745ms select 63 2m43s unknown Total 3,036 15h15m1s copy to 668 6h23m20s cte 48 59s315ms others 9 44s168ms select 2,311 8h49m58s Duration by user
Key values
- 15h15m1s (unknown) Main time consuming user
User Request type Count Duration load Total 4 39s355ms select 4 39s355ms postgres Total 108 41m57s copy to 108 41m57s pubeu Total 2,401 6h35m10s cte 30 1m31s select 2,371 6h33m39s qaeu Total 80 3m40s cte 17 56s745ms select 63 2m43s unknown Total 3,036 15h15m1s copy to 668 6h23m20s cte 48 59s315ms others 9 44s168ms select 2,311 8h49m58s Queries by host
Key values
- unknown Main host
- 5,629 Requests
- 22h36m30s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 2,391 Requests
- 10h31s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-07-08 20:02:59 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 2,296 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 50m33s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'HYPERTENSION, PULMONARY' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2024-07-11 04:28:46 - Bind query: yes ]
2 23m23s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-07-13 19:41:28 ]
3 23m12s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-07-13 19:00:03 ]
4 16m20s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-10 00:16:22 ]
5 16m19s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-12 00:16:20 ]
6 16m18s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-13 00:16:19 ]
7 16m17s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-07 00:16:19 ]
8 16m16s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-11 00:16:19 ]
9 16m16s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-09 00:16:19 ]
10 16m16s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-08 00:16:17 ]
11 10m49s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2024-07-10 05:47:11 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
12 10m46s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;[ Date: 2024-07-10 05:43:38 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
13 10m21s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2024-07-10 06:09:30 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
14 10m15s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;[ Date: 2024-07-10 05:31:45 - Bind query: yes ]
15 10m15s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2024-07-10 05:58:00 - Bind query: yes ]
16 10m15s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;[ Date: 2024-07-10 05:08:56 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
17 10m10s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;[ Date: 2024-07-10 05:20:14 - Bind query: yes ]
18 10m9s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'MUC5AC') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04010' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'HEDERACOSIDE C' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2024-07-09 02:09:18 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
19 10m6s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'MUC5AC') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04010' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'HEDERACOSIDE C' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2024-07-09 02:27:06 - Bind query: yes ]
20 10m3s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;[ Date: 2024-07-08 07:23:41 - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 2h2m31s 40 1s524ms 9m7s 3m3s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 08 02 4 34m36s 8m39s 13 1 1m51s 1m51s Jul 09 02 1 3m37s 3m37s Jul 10 02 2 3m38s 1m49s 17 2 4m10s 2m5s Jul 11 02 3 3m40s 1m13s 09 1 8m27s 8m27s Jul 12 09 1 1s561ms 1s561ms 12 8 28m6s 3m30s 13 12 34m11s 2m50s 21 1 1s561ms 1s561ms Jul 13 06 1 1s535ms 1s535ms 09 1 1s585ms 1s585ms 11 1 3s137ms 3s137ms 20 1 1s589ms 1s589ms [ User: pubeu - Total duration: 1h29m38s - Times executed: 26 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:37:14 Duration: 9m7s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:36:49 Duration: 8m31s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:36:13 Duration: 8m28s Database: ctdprd51 User: pubeu Bind query: yes
2 1h54m5s 7 16m16s 16m20s 16m17s select maint_query_logs_archive ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 07 00 1 16m17s 16m17s Jul 08 00 1 16m16s 16m16s Jul 09 00 1 16m16s 16m16s Jul 10 00 1 16m20s 16m20s Jul 11 00 1 16m16s 16m16s Jul 12 00 1 16m19s 16m19s Jul 13 00 1 16m18s 16m18s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-10 00:16:22 Duration: 16m20s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-12 00:16:20 Duration: 16m19s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-13 00:16:19 Duration: 16m18s
3 51m41s 5 10m6s 10m49s 10m20s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 09 02 2 20m15s 10m7s Jul 10 05 2 21m5s 10m32s 06 1 10m21s 10m21s [ User: pubeu - Total duration: 31m20s - Times executed: 3 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-07-10 05:47:11 Duration: 10m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-07-10 06:09:30 Duration: 10m21s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-07-10 05:58:00 Duration: 10m15s Bind query: yes
4 51m30s 5 10m3s 10m46s 10m18s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by i.sort_txt, g.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 08 07 1 10m3s 10m3s Jul 10 05 4 41m27s 10m21s [ User: pubeu - Total duration: 21m1s - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-10 05:43:38 Duration: 10m46s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-10 05:31:45 Duration: 10m15s Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-10 05:08:56 Duration: 10m15s Database: ctdprd51 User: pubeu Bind query: yes
5 50m33s 1 50m33s 50m33s 50m33s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 11 04 1 50m33s 50m33s -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'HYPERTENSION, PULMONARY' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-11 04:28:46 Duration: 50m33s Bind query: yes
6 34m28s 506 3s866ms 16s390ms 4s87ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 07 00 1 3s923ms 3s923ms 01 1 3s938ms 3s938ms 03 1 4s136ms 4s136ms 04 10 39s522ms 3s952ms 05 2 7s818ms 3s909ms 06 3 12s257ms 4s85ms 07 1 3s924ms 3s924ms 08 7 27s880ms 3s982ms 09 1 3s962ms 3s962ms 10 1 4s70ms 4s70ms 14 2 7s817ms 3s908ms 16 1 3s927ms 3s927ms 17 2 9s388ms 4s694ms 20 4 15s949ms 3s987ms 21 11 43s616ms 3s965ms 22 1 3s916ms 3s916ms 23 1 4s17ms 4s17ms Jul 08 03 5 20s468ms 4s93ms 05 1 4s406ms 4s406ms 06 1 4s31ms 4s31ms 07 1 4s68ms 4s68ms 08 2 8s21ms 4s10ms 09 4 16s25ms 4s6ms 10 1 4s327ms 4s327ms 16 1 3s915ms 3s915ms 17 3 12s429ms 4s143ms 21 4 15s786ms 3s946ms 22 6 23s939ms 3s989ms Jul 09 00 4 15s956ms 3s989ms 01 5 19s858ms 3s971ms 02 2 7s829ms 3s914ms 03 1 3s914ms 3s914ms 04 2 7s903ms 3s951ms 06 6 24s129ms 4s21ms 07 1 3s928ms 3s928ms 08 5 20s38ms 4s7ms 09 2 8s107ms 4s53ms 10 1 3s955ms 3s955ms 11 5 19s723ms 3s944ms 12 3 12s49ms 4s16ms 13 3 11s856ms 3s952ms 16 1 3s921ms 3s921ms 17 2 7s824ms 3s912ms 19 1 3s920ms 3s920ms 20 1 4s217ms 4s217ms 22 1 3s944ms 3s944ms 23 1 4s46ms 4s46ms Jul 10 00 1 4s129ms 4s129ms 01 4 15s796ms 3s949ms 02 11 44s61ms 4s5ms 03 8 31s668ms 3s958ms 04 1 3s902ms 3s902ms 05 4 16s933ms 4s233ms 06 2 8s55ms 4s27ms 07 1 4s3ms 4s3ms 08 3 11s956ms 3s985ms 09 2 8s453ms 4s226ms 10 2 7s963ms 3s981ms 12 2 7s883ms 3s941ms 13 3 22s389ms 7s463ms 14 3 11s772ms 3s924ms 15 3 11s831ms 3s943ms 16 2 7s944ms 3s972ms 20 25 1m41s 4s48ms 21 1 4s56ms 4s56ms Jul 11 02 3 11s864ms 3s954ms 03 1 4s94ms 4s94ms 04 10 39s754ms 3s975ms 05 2 7s915ms 3s957ms 06 4 32s797ms 8s199ms 07 4 15s690ms 3s922ms 08 1 3s939ms 3s939ms 09 1 3s982ms 3s982ms 10 1 3s930ms 3s930ms 12 3 11s810ms 3s936ms 13 2 7s870ms 3s935ms 14 5 19s844ms 3s968ms 15 3 11s861ms 3s953ms 16 4 15s873ms 3s968ms 19 2 8s50ms 4s25ms 23 2 7s926ms 3s963ms Jul 12 00 8 31s867ms 3s983ms 01 11 43s780ms 3s980ms 02 7 28s61ms 4s8ms 03 11 43s430ms 3s948ms 04 12 55s975ms 4s664ms 05 11 44s804ms 4s73ms 06 26 1m43s 3s969ms 07 11 43s337ms 3s939ms 08 11 43s519ms 3s956ms 09 1 3s887ms 3s887ms 10 1 3s961ms 3s961ms 11 2 8s117ms 4s58ms 12 1 3s976ms 3s976ms 13 2 20s395ms 10s197ms 14 2 8s70ms 4s35ms 15 1 3s916ms 3s916ms 16 4 16s762ms 4s190ms 17 4 15s986ms 3s996ms 18 1 3s941ms 3s941ms 19 11 44s564ms 4s51ms 23 1 3s930ms 3s930ms Jul 13 00 1 4s129ms 4s129ms 01 1 3s896ms 3s896ms 03 1 3s906ms 3s906ms 04 9 35s809ms 3s978ms 05 21 1m22s 3s949ms 06 20 1m18s 3s937ms 07 23 1m31s 3s978ms 08 16 1m3s 3s939ms 09 1 3s971ms 3s971ms 11 1 3s963ms 3s963ms 12 2 7s919ms 3s959ms 13 1 4s82ms 4s82ms 14 2 8s10ms 4s5ms 15 1 4s146ms 4s146ms 16 8 32s509ms 4s63ms 17 2 8s330ms 4s165ms 18 1 3s937ms 3s937ms 20 1 3s980ms 3s980ms 22 2 7s945ms 3s972ms 23 1 4s140ms 4s140ms [ User: pubeu - Total duration: 18m7s - Times executed: 268 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-12 13:27:27 Duration: 16s390ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-11 06:43:02 Duration: 15s865ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1428329') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1428329') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-10 13:59:31 Duration: 14s52ms Bind query: yes
7 23m23s 1 23m23s 23m23s 23m23s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 13 19 1 23m23s 23m23s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-13 19:41:28 Duration: 23m23s
8 23m12s 1 23m12s 23m12s 23m12s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 13 19 1 23m12s 23m12s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-13 19:00:03 Duration: 23m12s
9 13m49s 25 32s626ms 33s307ms 33s180ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 07 06 1 33s230ms 33s230ms 10 1 33s307ms 33s307ms 14 1 33s274ms 33s274ms 18 1 33s128ms 33s128ms Jul 08 06 1 33s141ms 33s141ms 10 1 33s191ms 33s191ms 14 1 33s107ms 33s107ms 18 1 33s297ms 33s297ms Jul 09 06 1 33s133ms 33s133ms 10 1 33s206ms 33s206ms 14 1 33s206ms 33s206ms 18 1 33s231ms 33s231ms Jul 10 06 1 33s112ms 33s112ms 10 1 33s199ms 33s199ms 14 1 33s155ms 33s155ms 18 1 33s276ms 33s276ms Jul 11 06 1 33s168ms 33s168ms 10 1 33s209ms 33s209ms 14 1 33s137ms 33s137ms 18 1 33s221ms 33s221ms Jul 12 06 1 33s254ms 33s254ms 10 1 33s206ms 33s206ms 14 1 33s269ms 33s269ms 18 1 33s210ms 33s210ms Jul 13 19 1 32s626ms 32s626ms [ User: postgres - Total duration: 13m16s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m16s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-07 10:05:35 Duration: 33s307ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-08 18:05:35 Duration: 33s297ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-10 18:05:35 Duration: 33s276ms Database: ctdprd51 User: postgres Application: pg_dump
10 7m20s 96 1s1ms 6s130ms 4s586ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 07 04 1 1s67ms 1s67ms 09 1 1s20ms 1s20ms 12 1 5s176ms 5s176ms 14 2 10s175ms 5s87ms 18 2 6s162ms 3s81ms 22 4 16s735ms 4s183ms Jul 08 00 1 5s144ms 5s144ms 01 1 5s261ms 5s261ms 03 1 5s203ms 5s203ms 08 1 5s145ms 5s145ms 09 2 10s523ms 5s261ms 11 2 6s296ms 3s148ms 13 1 5s275ms 5s275ms 17 1 5s188ms 5s188ms 22 1 5s202ms 5s202ms Jul 09 01 4 16s906ms 4s226ms 02 1 1s11ms 1s11ms 03 1 5s137ms 5s137ms 10 1 5s159ms 5s159ms 12 1 1s16ms 1s16ms 13 1 5s179ms 5s179ms 16 1 6s130ms 6s130ms 17 1 5s551ms 5s551ms 22 2 10s359ms 5s179ms 23 2 10s224ms 5s112ms Jul 10 03 1 5s245ms 5s245ms 04 2 10s698ms 5s349ms 05 1 1s4ms 1s4ms 06 3 15s730ms 5s243ms 08 1 5s260ms 5s260ms 09 3 16s349ms 5s449ms 10 2 10s763ms 5s381ms 11 1 5s259ms 5s259ms 14 4 16s602ms 4s150ms 15 1 5s142ms 5s142ms 22 6 31s915ms 5s319ms Jul 11 01 2 10s310ms 5s155ms 05 1 5s296ms 5s296ms 13 1 1s1ms 1s1ms 16 1 5s347ms 5s347ms 22 3 15s968ms 5s322ms Jul 12 05 1 4s986ms 4s986ms 06 1 5s47ms 5s47ms 09 2 6s66ms 3s33ms 12 1 5s293ms 5s293ms 22 1 5s36ms 5s36ms 23 1 5s155ms 5s155ms Jul 13 01 3 7s244ms 2s414ms 03 1 5s206ms 5s206ms 07 4 20s615ms 5s153ms 08 1 5s177ms 5s177ms 09 1 1s12ms 1s12ms 10 2 10s424ms 5s212ms 11 2 10s510ms 5s255ms 12 2 10s438ms 5s219ms 14 2 10s410ms 5s205ms 20 1 5s565ms 5s565ms [ User: pubeu - Total duration: 4m23s - Times executed: 59 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1400273' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-09 16:36:18 Duration: 6s130ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1400273' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-10 09:52:34 Duration: 5s834ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1410064' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-09 01:48:08 Duration: 5s568ms Bind query: yes
11 6m41s 1 6m41s 6m41s 6m41s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 13 19 1 6m41s 6m41s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-13 19:52:56 Duration: 6m41s
12 6m39s 1 6m39s 6m39s 6m39s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 13 19 1 6m39s 6m39s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-13 19:11:30 Duration: 6m39s
13 5m53s 25 14s21ms 14s259ms 14s134ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 07 06 1 14s177ms 14s177ms 10 1 14s120ms 14s120ms 14 1 14s102ms 14s102ms 18 1 14s81ms 14s81ms Jul 08 06 1 14s183ms 14s183ms 10 1 14s178ms 14s178ms 14 1 14s161ms 14s161ms 18 1 14s108ms 14s108ms Jul 09 06 1 14s140ms 14s140ms 10 1 14s144ms 14s144ms 14 1 14s173ms 14s173ms 18 1 14s154ms 14s154ms Jul 10 06 1 14s211ms 14s211ms 10 1 14s164ms 14s164ms 14 1 14s87ms 14s87ms 18 1 14s37ms 14s37ms Jul 11 06 1 14s161ms 14s161ms 10 1 14s113ms 14s113ms 14 1 14s259ms 14s259ms 18 1 14s150ms 14s150ms Jul 12 06 1 14s111ms 14s111ms 10 1 14s96ms 14s96ms 14 1 14s82ms 14s82ms 18 1 14s136ms 14s136ms Jul 13 18 1 14s21ms 14s21ms [ User: postgres - Total duration: 5m53s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m53s - Times executed: 25 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:15 Duration: 14s259ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 06:00:16 Duration: 14s211ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 06:00:16 Duration: 14s183ms Database: ctdprd51 User: postgres Application: pg_dump
14 5m26s 278 1s98ms 1s428ms 1s174ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 07 01 2 2s421ms 1s210ms 02 1 1s188ms 1s188ms 03 1 1s208ms 1s208ms 04 2 2s422ms 1s211ms 05 4 4s916ms 1s229ms 06 2 2s315ms 1s157ms 07 2 2s367ms 1s183ms 09 2 2s540ms 1s270ms 10 2 2s325ms 1s162ms 11 1 1s180ms 1s180ms 12 2 2s368ms 1s184ms 14 1 1s179ms 1s179ms 15 1 1s119ms 1s119ms 16 1 1s166ms 1s166ms 18 3 3s521ms 1s173ms 19 3 3s522ms 1s174ms 20 1 1s163ms 1s163ms 21 4 4s742ms 1s185ms 23 1 1s202ms 1s202ms Jul 08 00 2 2s397ms 1s198ms 01 1 1s206ms 1s206ms 02 1 1s142ms 1s142ms 05 3 3s768ms 1s256ms 06 2 2s361ms 1s180ms 07 2 2s316ms 1s158ms 08 1 1s190ms 1s190ms 10 1 1s174ms 1s174ms 13 1 1s138ms 1s138ms 15 2 2s315ms 1s157ms 19 1 1s181ms 1s181ms 21 3 3s445ms 1s148ms 23 1 1s214ms 1s214ms Jul 09 00 1 1s194ms 1s194ms 01 2 2s293ms 1s146ms 02 2 2s396ms 1s198ms 03 4 4s724ms 1s181ms 04 1 1s149ms 1s149ms 05 2 2s533ms 1s266ms 06 1 1s203ms 1s203ms 09 1 1s194ms 1s194ms 10 1 1s181ms 1s181ms 11 2 2s345ms 1s172ms 12 3 3s508ms 1s169ms 13 5 5s767ms 1s153ms 14 3 3s526ms 1s175ms 15 2 2s365ms 1s182ms 16 2 2s485ms 1s242ms 17 4 4s596ms 1s149ms 18 1 1s189ms 1s189ms 19 1 1s154ms 1s154ms 20 3 3s550ms 1s183ms 21 5 5s822ms 1s164ms 22 4 4s661ms 1s165ms 23 5 5s861ms 1s172ms Jul 10 00 2 2s346ms 1s173ms 02 4 4s554ms 1s138ms 03 1 1s114ms 1s114ms 05 8 9s498ms 1s187ms 06 2 2s347ms 1s173ms 07 4 4s654ms 1s163ms 08 3 3s501ms 1s167ms 09 4 4s644ms 1s161ms 10 3 3s496ms 1s165ms 11 1 1s157ms 1s157ms 12 3 3s530ms 1s176ms 13 1 1s231ms 1s231ms 14 4 4s627ms 1s156ms 15 2 2s278ms 1s139ms 17 3 3s457ms 1s152ms 18 4 4s609ms 1s152ms 19 2 2s360ms 1s180ms 20 1 1s175ms 1s175ms 23 4 4s716ms 1s179ms Jul 11 00 2 2s301ms 1s150ms 01 2 2s352ms 1s176ms 02 2 2s318ms 1s159ms 03 2 2s432ms 1s216ms 04 4 4s593ms 1s148ms 05 2 2s531ms 1s265ms 06 2 2s310ms 1s155ms 07 2 2s332ms 1s166ms 08 2 2s352ms 1s176ms 09 2 2s342ms 1s171ms 11 1 1s175ms 1s175ms 12 1 1s189ms 1s189ms 13 1 1s277ms 1s277ms 14 1 1s198ms 1s198ms 15 1 1s170ms 1s170ms 16 1 1s169ms 1s169ms 19 3 3s455ms 1s151ms 21 5 5s956ms 1s191ms 22 2 2s350ms 1s175ms 23 2 2s318ms 1s159ms Jul 12 00 1 1s165ms 1s165ms 01 1 1s182ms 1s182ms 02 1 1s161ms 1s161ms 03 3 3s526ms 1s175ms 04 2 2s272ms 1s136ms 05 2 2s548ms 1s274ms 06 2 2s369ms 1s184ms 09 2 2s353ms 1s176ms 10 2 2s309ms 1s154ms 11 3 3s471ms 1s157ms 12 2 2s330ms 1s165ms 14 1 1s174ms 1s174ms 16 1 1s163ms 1s163ms 17 2 2s337ms 1s168ms 18 1 1s143ms 1s143ms 19 4 4s618ms 1s154ms 20 2 2s292ms 1s146ms 21 1 1s154ms 1s154ms 22 4 4s668ms 1s167ms Jul 13 01 1 1s182ms 1s182ms 02 1 1s150ms 1s150ms 03 2 2s332ms 1s166ms 05 3 3s682ms 1s227ms 06 6 7s75ms 1s179ms 07 1 1s136ms 1s136ms 08 1 1s154ms 1s154ms 09 2 2s360ms 1s180ms 10 3 3s467ms 1s155ms 11 1 1s162ms 1s162ms 13 1 1s174ms 1s174ms 15 2 2s332ms 1s166ms 16 1 1s175ms 1s175ms 17 1 1s163ms 1s163ms 18 1 1s126ms 1s126ms 19 2 2s242ms 1s121ms 20 2 2s233ms 1s116ms 21 2 2s240ms 1s120ms [ User: pubeu - Total duration: 3m19s - Times executed: 170 ]
[ User: qaeu - Total duration: 5s79ms - Times executed: 4 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1712444' or receptorTerm.id = '1712444' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-07 09:41:15 Duration: 1s428ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2045374' or receptorTerm.id = '2045374' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-09 16:36:11 Duration: 1s304ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1433030' or receptorTerm.id = '1433030' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-08 05:38:40 Duration: 1s298ms Database: ctdprd51 User: pubeu Bind query: yes
15 5m25s 80 1s199ms 38s568ms 4s68ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 07 01 2 5s670ms 2s835ms 07 1 1s980ms 1s980ms 09 2 4s277ms 2s138ms 11 1 2s582ms 2s582ms 16 1 2s634ms 2s634ms 20 2 7s574ms 3s787ms 21 1 23s395ms 23s395ms 22 1 13s21ms 13s21ms 23 1 1s389ms 1s389ms Jul 08 03 20 37s223ms 1s861ms 05 3 3s864ms 1s288ms 08 1 2s544ms 2s544ms 09 1 6s479ms 6s479ms 11 1 1s374ms 1s374ms 15 1 4s27ms 4s27ms 22 1 1s337ms 1s337ms Jul 09 01 1 1s952ms 1s952ms 02 22 58s39ms 2s638ms 11 1 2s319ms 2s319ms 16 1 4s976ms 4s976ms Jul 10 02 1 2s251ms 2s251ms 03 1 17s576ms 17s576ms 06 1 6s557ms 6s557ms 08 1 2s775ms 2s775ms 09 1 4s818ms 4s818ms 20 1 2s381ms 2s381ms 21 1 1s355ms 1s355ms Jul 11 02 1 2s273ms 2s273ms 11 1 17s486ms 17s486ms 21 3 1m7s 22s567ms Jul 12 14 1 5s898ms 5s898ms 17 1 2s993ms 2s993ms 20 1 4s738ms 4s738ms [ User: pubeu - Total duration: 2m9s - Times executed: 28 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 6232400;
Date: 2024-07-11 21:35:55 Duration: 38s568ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1093700;
Date: 2024-07-11 21:34:49 Duration: 26s998ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073988') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 2960900;
Date: 2024-07-07 21:26:06 Duration: 23s395ms Bind query: yes
16 5m22s 23 13s966ms 14s176ms 14s17ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 07 06 1 14s4ms 14s4ms 10 1 13s998ms 13s998ms 14 1 13s990ms 13s990ms 18 1 14s13ms 14s13ms Jul 08 10 1 14s176ms 14s176ms 14 1 14s67ms 14s67ms 18 1 13s977ms 13s977ms Jul 09 06 1 13s966ms 13s966ms 10 1 13s986ms 13s986ms 14 1 14s52ms 14s52ms 18 1 13s985ms 13s985ms Jul 10 06 1 14s44ms 14s44ms 10 1 13s992ms 13s992ms 14 1 14s23ms 14s23ms 18 1 14s36ms 14s36ms Jul 11 10 1 13s985ms 13s985ms 14 1 14s8ms 14s8ms 18 1 13s989ms 13s989ms Jul 12 06 1 14s77ms 14s77ms 10 1 14s9ms 14s9ms 14 1 14s30ms 14s30ms 18 1 13s975ms 13s975ms Jul 13 18 1 14s13ms 14s13ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 10:00:58 Duration: 14s176ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-12 06:00:57 Duration: 14s77ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 14:00:58 Duration: 14s67ms
17 4m54s 22 13s296ms 13s478ms 13s365ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 07 06 1 13s366ms 13s366ms 10 1 13s296ms 13s296ms 14 1 13s338ms 13s338ms 18 1 13s342ms 13s342ms Jul 08 06 1 13s408ms 13s408ms 14 1 13s398ms 13s398ms 18 1 13s338ms 13s338ms Jul 09 10 1 13s342ms 13s342ms 14 1 13s378ms 13s378ms 18 1 13s346ms 13s346ms Jul 10 10 1 13s478ms 13s478ms 14 1 13s355ms 13s355ms 18 1 13s314ms 13s314ms Jul 11 06 1 13s390ms 13s390ms 10 1 13s345ms 13s345ms 14 1 13s425ms 13s425ms 18 1 13s363ms 13s363ms Jul 12 06 1 13s395ms 13s395ms 10 1 13s371ms 13s371ms 14 1 13s359ms 13s359ms 18 1 13s369ms 13s369ms Jul 13 18 1 13s308ms 13s308ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 10:00:43 Duration: 13s478ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:43 Duration: 13s425ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 06:00:43 Duration: 13s408ms
18 4m3s 74 1s3ms 44s842ms 3s296ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 07 03 3 6s208ms 2s69ms 04 2 4s251ms 2s125ms 05 1 2s105ms 2s105ms 06 2 3s531ms 1s765ms 09 12 41s858ms 3s488ms 10 1 3s183ms 3s183ms 20 1 2s71ms 2s71ms 22 2 3s72ms 1s536ms Jul 08 03 1 4s380ms 4s380ms 11 20 1m6s 3s306ms Jul 09 00 2 3s99ms 1s549ms 01 4 9s550ms 2s387ms 03 1 44s842ms 44s842ms 18 1 1s81ms 1s81ms 21 2 4s748ms 2s374ms Jul 10 01 1 3s239ms 3s239ms 04 1 2s115ms 2s115ms 08 1 12s959ms 12s959ms 09 3 3s189ms 1s63ms 10 2 2s248ms 1s124ms 11 1 4s393ms 4s393ms 21 1 2s24ms 2s24ms 22 2 2s184ms 1s92ms Jul 11 22 2 3s955ms 1s977ms Jul 12 02 1 1s168ms 1s168ms 10 1 1s571ms 1s571ms 20 1 1s844ms 1s844ms Jul 13 09 1 1s32ms 1s32ms 17 1 1s926ms 1s926ms [ User: pubeu - Total duration: 3m3s - Times executed: 50 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-09 03:53:35 Duration: 44s842ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2074277') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-10 08:30:12 Duration: 12s959ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2079601') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-10 11:24:37 Duration: 4s393ms Database: ctdprd51 User: pubeu Bind query: yes
19 3m8s 24 7s732ms 8s8ms 7s853ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 07 06 1 7s829ms 7s829ms 10 1 7s833ms 7s833ms 14 1 7s846ms 7s846ms 18 1 7s821ms 7s821ms Jul 08 06 1 7s825ms 7s825ms 10 1 7s839ms 7s839ms 14 1 7s872ms 7s872ms 18 1 7s936ms 7s936ms Jul 09 06 1 7s839ms 7s839ms 10 1 7s859ms 7s859ms 14 1 7s827ms 7s827ms 18 1 7s881ms 7s881ms Jul 10 06 1 7s823ms 7s823ms 10 1 7s862ms 7s862ms 14 1 7s830ms 7s830ms 18 1 7s866ms 7s866ms Jul 11 06 1 7s851ms 7s851ms 10 1 7s861ms 7s861ms 14 1 7s857ms 7s857ms Jul 12 06 1 7s833ms 7s833ms 10 1 7s858ms 7s858ms 14 1 7s892ms 7s892ms 18 1 8s8ms 8s8ms Jul 13 19 1 7s732ms 7s732ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-12 18:05:42 Duration: 8s8ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-08 18:05:43 Duration: 7s936ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-12 14:05:43 Duration: 7s892ms
20 3m5s 10 6s827ms 41s276ms 18s532ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 09 04 9 2m58s 19s833ms Jul 12 08 1 6s827ms 6s827ms [ User: pubeu - Total duration: 1m16s - Times executed: 5 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ARTENIMOL' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-09 04:23:42 Duration: 41s276ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ARTENIMOL' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-09 04:23:42 Duration: 40s684ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ARTENIMOL' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-09 04:23:38 Duration: 40s654ms Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 506 34m28s 3s866ms 16s390ms 4s87ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 07 00 1 3s923ms 3s923ms 01 1 3s938ms 3s938ms 03 1 4s136ms 4s136ms 04 10 39s522ms 3s952ms 05 2 7s818ms 3s909ms 06 3 12s257ms 4s85ms 07 1 3s924ms 3s924ms 08 7 27s880ms 3s982ms 09 1 3s962ms 3s962ms 10 1 4s70ms 4s70ms 14 2 7s817ms 3s908ms 16 1 3s927ms 3s927ms 17 2 9s388ms 4s694ms 20 4 15s949ms 3s987ms 21 11 43s616ms 3s965ms 22 1 3s916ms 3s916ms 23 1 4s17ms 4s17ms Jul 08 03 5 20s468ms 4s93ms 05 1 4s406ms 4s406ms 06 1 4s31ms 4s31ms 07 1 4s68ms 4s68ms 08 2 8s21ms 4s10ms 09 4 16s25ms 4s6ms 10 1 4s327ms 4s327ms 16 1 3s915ms 3s915ms 17 3 12s429ms 4s143ms 21 4 15s786ms 3s946ms 22 6 23s939ms 3s989ms Jul 09 00 4 15s956ms 3s989ms 01 5 19s858ms 3s971ms 02 2 7s829ms 3s914ms 03 1 3s914ms 3s914ms 04 2 7s903ms 3s951ms 06 6 24s129ms 4s21ms 07 1 3s928ms 3s928ms 08 5 20s38ms 4s7ms 09 2 8s107ms 4s53ms 10 1 3s955ms 3s955ms 11 5 19s723ms 3s944ms 12 3 12s49ms 4s16ms 13 3 11s856ms 3s952ms 16 1 3s921ms 3s921ms 17 2 7s824ms 3s912ms 19 1 3s920ms 3s920ms 20 1 4s217ms 4s217ms 22 1 3s944ms 3s944ms 23 1 4s46ms 4s46ms Jul 10 00 1 4s129ms 4s129ms 01 4 15s796ms 3s949ms 02 11 44s61ms 4s5ms 03 8 31s668ms 3s958ms 04 1 3s902ms 3s902ms 05 4 16s933ms 4s233ms 06 2 8s55ms 4s27ms 07 1 4s3ms 4s3ms 08 3 11s956ms 3s985ms 09 2 8s453ms 4s226ms 10 2 7s963ms 3s981ms 12 2 7s883ms 3s941ms 13 3 22s389ms 7s463ms 14 3 11s772ms 3s924ms 15 3 11s831ms 3s943ms 16 2 7s944ms 3s972ms 20 25 1m41s 4s48ms 21 1 4s56ms 4s56ms Jul 11 02 3 11s864ms 3s954ms 03 1 4s94ms 4s94ms 04 10 39s754ms 3s975ms 05 2 7s915ms 3s957ms 06 4 32s797ms 8s199ms 07 4 15s690ms 3s922ms 08 1 3s939ms 3s939ms 09 1 3s982ms 3s982ms 10 1 3s930ms 3s930ms 12 3 11s810ms 3s936ms 13 2 7s870ms 3s935ms 14 5 19s844ms 3s968ms 15 3 11s861ms 3s953ms 16 4 15s873ms 3s968ms 19 2 8s50ms 4s25ms 23 2 7s926ms 3s963ms Jul 12 00 8 31s867ms 3s983ms 01 11 43s780ms 3s980ms 02 7 28s61ms 4s8ms 03 11 43s430ms 3s948ms 04 12 55s975ms 4s664ms 05 11 44s804ms 4s73ms 06 26 1m43s 3s969ms 07 11 43s337ms 3s939ms 08 11 43s519ms 3s956ms 09 1 3s887ms 3s887ms 10 1 3s961ms 3s961ms 11 2 8s117ms 4s58ms 12 1 3s976ms 3s976ms 13 2 20s395ms 10s197ms 14 2 8s70ms 4s35ms 15 1 3s916ms 3s916ms 16 4 16s762ms 4s190ms 17 4 15s986ms 3s996ms 18 1 3s941ms 3s941ms 19 11 44s564ms 4s51ms 23 1 3s930ms 3s930ms Jul 13 00 1 4s129ms 4s129ms 01 1 3s896ms 3s896ms 03 1 3s906ms 3s906ms 04 9 35s809ms 3s978ms 05 21 1m22s 3s949ms 06 20 1m18s 3s937ms 07 23 1m31s 3s978ms 08 16 1m3s 3s939ms 09 1 3s971ms 3s971ms 11 1 3s963ms 3s963ms 12 2 7s919ms 3s959ms 13 1 4s82ms 4s82ms 14 2 8s10ms 4s5ms 15 1 4s146ms 4s146ms 16 8 32s509ms 4s63ms 17 2 8s330ms 4s165ms 18 1 3s937ms 3s937ms 20 1 3s980ms 3s980ms 22 2 7s945ms 3s972ms 23 1 4s140ms 4s140ms [ User: pubeu - Total duration: 18m7s - Times executed: 268 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-12 13:27:27 Duration: 16s390ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-11 06:43:02 Duration: 15s865ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1428329') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1428329') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-10 13:59:31 Duration: 14s52ms Bind query: yes
2 278 5m26s 1s98ms 1s428ms 1s174ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 07 01 2 2s421ms 1s210ms 02 1 1s188ms 1s188ms 03 1 1s208ms 1s208ms 04 2 2s422ms 1s211ms 05 4 4s916ms 1s229ms 06 2 2s315ms 1s157ms 07 2 2s367ms 1s183ms 09 2 2s540ms 1s270ms 10 2 2s325ms 1s162ms 11 1 1s180ms 1s180ms 12 2 2s368ms 1s184ms 14 1 1s179ms 1s179ms 15 1 1s119ms 1s119ms 16 1 1s166ms 1s166ms 18 3 3s521ms 1s173ms 19 3 3s522ms 1s174ms 20 1 1s163ms 1s163ms 21 4 4s742ms 1s185ms 23 1 1s202ms 1s202ms Jul 08 00 2 2s397ms 1s198ms 01 1 1s206ms 1s206ms 02 1 1s142ms 1s142ms 05 3 3s768ms 1s256ms 06 2 2s361ms 1s180ms 07 2 2s316ms 1s158ms 08 1 1s190ms 1s190ms 10 1 1s174ms 1s174ms 13 1 1s138ms 1s138ms 15 2 2s315ms 1s157ms 19 1 1s181ms 1s181ms 21 3 3s445ms 1s148ms 23 1 1s214ms 1s214ms Jul 09 00 1 1s194ms 1s194ms 01 2 2s293ms 1s146ms 02 2 2s396ms 1s198ms 03 4 4s724ms 1s181ms 04 1 1s149ms 1s149ms 05 2 2s533ms 1s266ms 06 1 1s203ms 1s203ms 09 1 1s194ms 1s194ms 10 1 1s181ms 1s181ms 11 2 2s345ms 1s172ms 12 3 3s508ms 1s169ms 13 5 5s767ms 1s153ms 14 3 3s526ms 1s175ms 15 2 2s365ms 1s182ms 16 2 2s485ms 1s242ms 17 4 4s596ms 1s149ms 18 1 1s189ms 1s189ms 19 1 1s154ms 1s154ms 20 3 3s550ms 1s183ms 21 5 5s822ms 1s164ms 22 4 4s661ms 1s165ms 23 5 5s861ms 1s172ms Jul 10 00 2 2s346ms 1s173ms 02 4 4s554ms 1s138ms 03 1 1s114ms 1s114ms 05 8 9s498ms 1s187ms 06 2 2s347ms 1s173ms 07 4 4s654ms 1s163ms 08 3 3s501ms 1s167ms 09 4 4s644ms 1s161ms 10 3 3s496ms 1s165ms 11 1 1s157ms 1s157ms 12 3 3s530ms 1s176ms 13 1 1s231ms 1s231ms 14 4 4s627ms 1s156ms 15 2 2s278ms 1s139ms 17 3 3s457ms 1s152ms 18 4 4s609ms 1s152ms 19 2 2s360ms 1s180ms 20 1 1s175ms 1s175ms 23 4 4s716ms 1s179ms Jul 11 00 2 2s301ms 1s150ms 01 2 2s352ms 1s176ms 02 2 2s318ms 1s159ms 03 2 2s432ms 1s216ms 04 4 4s593ms 1s148ms 05 2 2s531ms 1s265ms 06 2 2s310ms 1s155ms 07 2 2s332ms 1s166ms 08 2 2s352ms 1s176ms 09 2 2s342ms 1s171ms 11 1 1s175ms 1s175ms 12 1 1s189ms 1s189ms 13 1 1s277ms 1s277ms 14 1 1s198ms 1s198ms 15 1 1s170ms 1s170ms 16 1 1s169ms 1s169ms 19 3 3s455ms 1s151ms 21 5 5s956ms 1s191ms 22 2 2s350ms 1s175ms 23 2 2s318ms 1s159ms Jul 12 00 1 1s165ms 1s165ms 01 1 1s182ms 1s182ms 02 1 1s161ms 1s161ms 03 3 3s526ms 1s175ms 04 2 2s272ms 1s136ms 05 2 2s548ms 1s274ms 06 2 2s369ms 1s184ms 09 2 2s353ms 1s176ms 10 2 2s309ms 1s154ms 11 3 3s471ms 1s157ms 12 2 2s330ms 1s165ms 14 1 1s174ms 1s174ms 16 1 1s163ms 1s163ms 17 2 2s337ms 1s168ms 18 1 1s143ms 1s143ms 19 4 4s618ms 1s154ms 20 2 2s292ms 1s146ms 21 1 1s154ms 1s154ms 22 4 4s668ms 1s167ms Jul 13 01 1 1s182ms 1s182ms 02 1 1s150ms 1s150ms 03 2 2s332ms 1s166ms 05 3 3s682ms 1s227ms 06 6 7s75ms 1s179ms 07 1 1s136ms 1s136ms 08 1 1s154ms 1s154ms 09 2 2s360ms 1s180ms 10 3 3s467ms 1s155ms 11 1 1s162ms 1s162ms 13 1 1s174ms 1s174ms 15 2 2s332ms 1s166ms 16 1 1s175ms 1s175ms 17 1 1s163ms 1s163ms 18 1 1s126ms 1s126ms 19 2 2s242ms 1s121ms 20 2 2s233ms 1s116ms 21 2 2s240ms 1s120ms [ User: pubeu - Total duration: 3m19s - Times executed: 170 ]
[ User: qaeu - Total duration: 5s79ms - Times executed: 4 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1712444' or receptorTerm.id = '1712444' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-07 09:41:15 Duration: 1s428ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2045374' or receptorTerm.id = '2045374' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-09 16:36:11 Duration: 1s304ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1433030' or receptorTerm.id = '1433030' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-08 05:38:40 Duration: 1s298ms Database: ctdprd51 User: pubeu Bind query: yes
3 121 2m49s 1s350ms 1s473ms 1s401ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 07 02 8 11s222ms 1s402ms 03 1 1s418ms 1s418ms 04 5 7s126ms 1s425ms 05 6 8s333ms 1s388ms 06 4 5s557ms 1s389ms 07 2 2s777ms 1s388ms 08 4 5s662ms 1s415ms 09 5 6s976ms 1s395ms 10 3 4s191ms 1s397ms 11 2 2s786ms 1s393ms 12 6 8s304ms 1s384ms 16 1 1s418ms 1s418ms 22 5 7s32ms 1s406ms Jul 08 01 1 1s423ms 1s423ms 05 2 2s857ms 1s428ms 12 1 1s361ms 1s361ms 21 6 8s464ms 1s410ms 23 2 2s750ms 1s375ms Jul 09 01 4 5s543ms 1s385ms 03 1 1s384ms 1s384ms 04 2 2s837ms 1s418ms 05 2 2s775ms 1s387ms 09 1 1s421ms 1s421ms 11 2 2s835ms 1s417ms 12 1 1s407ms 1s407ms 15 1 1s364ms 1s364ms 21 1 1s427ms 1s427ms 22 1 1s387ms 1s387ms Jul 10 01 1 1s432ms 1s432ms 02 1 1s392ms 1s392ms 03 1 1s366ms 1s366ms 05 1 1s464ms 1s464ms 06 1 1s417ms 1s417ms 23 1 1s380ms 1s380ms Jul 11 03 4 5s650ms 1s412ms 05 2 2s785ms 1s392ms 07 1 1s417ms 1s417ms 13 1 1s445ms 1s445ms 15 1 1s413ms 1s413ms 19 2 2s756ms 1s378ms 21 1 1s473ms 1s473ms Jul 12 04 1 1s405ms 1s405ms 05 2 2s818ms 1s409ms 06 1 1s362ms 1s362ms 08 1 1s420ms 1s420ms 11 2 2s809ms 1s404ms 12 4 5s571ms 1s392ms 13 1 1s357ms 1s357ms Jul 13 00 2 2s796ms 1s398ms 02 3 4s181ms 1s393ms 04 1 1s414ms 1s414ms 05 2 2s795ms 1s397ms 07 2 2s804ms 1s402ms 09 1 1s393ms 1s393ms [ User: pubeu - Total duration: 1m27s - Times executed: 62 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-11 21:55:16 Duration: 1s473ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-10 05:37:18 Duration: 1s464ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-07 08:57:51 Duration: 1s449ms Bind query: yes
4 100 2m12s 1s206ms 1s598ms 1s322ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 07 02 1 1s416ms 1s416ms 05 3 4s183ms 1s394ms 08 2 2s550ms 1s275ms 09 1 1s243ms 1s243ms 17 1 1s338ms 1s338ms 18 1 1s271ms 1s271ms 19 1 1s317ms 1s317ms 20 4 5s71ms 1s267ms 21 1 1s229ms 1s229ms 22 1 1s405ms 1s405ms 23 4 5s283ms 1s320ms Jul 08 01 2 2s660ms 1s330ms 04 1 1s259ms 1s259ms 05 4 5s409ms 1s352ms 10 2 2s537ms 1s268ms 11 3 4s186ms 1s395ms 14 1 1s420ms 1s420ms 15 3 3s776ms 1s258ms 19 1 1s360ms 1s360ms 20 1 1s276ms 1s276ms 22 2 2s942ms 1s471ms Jul 09 01 1 1s294ms 1s294ms 05 2 2s799ms 1s399ms 07 2 2s580ms 1s290ms 15 1 1s246ms 1s246ms 19 1 1s329ms 1s329ms 22 1 1s243ms 1s243ms Jul 10 01 1 1s318ms 1s318ms 04 3 3s844ms 1s281ms 05 4 5s481ms 1s370ms 06 1 1s344ms 1s344ms 10 3 3s850ms 1s283ms 11 1 1s257ms 1s257ms 13 1 1s544ms 1s544ms 17 2 2s776ms 1s388ms 19 1 1s314ms 1s314ms 23 1 1s286ms 1s286ms Jul 11 03 1 1s232ms 1s232ms 05 2 2s864ms 1s432ms 09 1 1s276ms 1s276ms 13 1 1s402ms 1s402ms 14 1 1s333ms 1s333ms 15 1 1s275ms 1s275ms 16 1 1s270ms 1s270ms 20 1 1s273ms 1s273ms 21 1 1s391ms 1s391ms 23 2 2s622ms 1s311ms Jul 12 04 2 2s549ms 1s274ms 05 3 4s148ms 1s382ms 06 1 1s270ms 1s270ms 07 1 1s277ms 1s277ms 10 1 1s293ms 1s293ms 12 1 1s352ms 1s352ms 17 1 1s251ms 1s251ms Jul 13 02 1 1s284ms 1s284ms 04 1 1s241ms 1s241ms 05 2 2s815ms 1s407ms 12 2 2s546ms 1s273ms 15 1 1s362ms 1s362ms 17 5 6s262ms 1s252ms [ User: pubeu - Total duration: 1m - Times executed: 46 ]
[ User: qaeu - Total duration: 2s865ms - Times executed: 2 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081718') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081718') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-08 11:44:28 Duration: 1s598ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081718') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081718') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-08 22:13:13 Duration: 1s570ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2076265') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2076265') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-10 13:20:47 Duration: 1s544ms Database: ctdprd51 User: pubeu Bind query: yes
5 96 7m20s 1s1ms 6s130ms 4s586ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 07 04 1 1s67ms 1s67ms 09 1 1s20ms 1s20ms 12 1 5s176ms 5s176ms 14 2 10s175ms 5s87ms 18 2 6s162ms 3s81ms 22 4 16s735ms 4s183ms Jul 08 00 1 5s144ms 5s144ms 01 1 5s261ms 5s261ms 03 1 5s203ms 5s203ms 08 1 5s145ms 5s145ms 09 2 10s523ms 5s261ms 11 2 6s296ms 3s148ms 13 1 5s275ms 5s275ms 17 1 5s188ms 5s188ms 22 1 5s202ms 5s202ms Jul 09 01 4 16s906ms 4s226ms 02 1 1s11ms 1s11ms 03 1 5s137ms 5s137ms 10 1 5s159ms 5s159ms 12 1 1s16ms 1s16ms 13 1 5s179ms 5s179ms 16 1 6s130ms 6s130ms 17 1 5s551ms 5s551ms 22 2 10s359ms 5s179ms 23 2 10s224ms 5s112ms Jul 10 03 1 5s245ms 5s245ms 04 2 10s698ms 5s349ms 05 1 1s4ms 1s4ms 06 3 15s730ms 5s243ms 08 1 5s260ms 5s260ms 09 3 16s349ms 5s449ms 10 2 10s763ms 5s381ms 11 1 5s259ms 5s259ms 14 4 16s602ms 4s150ms 15 1 5s142ms 5s142ms 22 6 31s915ms 5s319ms Jul 11 01 2 10s310ms 5s155ms 05 1 5s296ms 5s296ms 13 1 1s1ms 1s1ms 16 1 5s347ms 5s347ms 22 3 15s968ms 5s322ms Jul 12 05 1 4s986ms 4s986ms 06 1 5s47ms 5s47ms 09 2 6s66ms 3s33ms 12 1 5s293ms 5s293ms 22 1 5s36ms 5s36ms 23 1 5s155ms 5s155ms Jul 13 01 3 7s244ms 2s414ms 03 1 5s206ms 5s206ms 07 4 20s615ms 5s153ms 08 1 5s177ms 5s177ms 09 1 1s12ms 1s12ms 10 2 10s424ms 5s212ms 11 2 10s510ms 5s255ms 12 2 10s438ms 5s219ms 14 2 10s410ms 5s205ms 20 1 5s565ms 5s565ms [ User: pubeu - Total duration: 4m23s - Times executed: 59 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1400273' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-09 16:36:18 Duration: 6s130ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1400273' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-10 09:52:34 Duration: 5s834ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1410064' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-09 01:48:08 Duration: 5s568ms Bind query: yes
6 86 1m51s 1s201ms 1s535ms 1s298ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 07 02 1 1s272ms 1s272ms 05 2 2s856ms 1s428ms 06 1 1s261ms 1s261ms 11 1 1s275ms 1s275ms 19 1 1s258ms 1s258ms 20 1 1s258ms 1s258ms 21 1 1s281ms 1s281ms Jul 08 04 1 1s395ms 1s395ms 05 2 2s761ms 1s380ms 08 2 2s565ms 1s282ms 10 1 1s275ms 1s275ms 11 1 1s243ms 1s243ms 15 1 1s274ms 1s274ms 18 1 1s288ms 1s288ms Jul 09 03 2 2s541ms 1s270ms 05 2 2s736ms 1s368ms 11 1 1s267ms 1s267ms 15 2 2s571ms 1s285ms 22 1 1s266ms 1s266ms 23 1 1s249ms 1s249ms Jul 10 02 1 1s206ms 1s206ms 03 1 1s283ms 1s283ms 05 2 2s712ms 1s356ms 06 2 2s501ms 1s250ms 07 1 1s329ms 1s329ms 08 1 1s283ms 1s283ms 10 1 1s484ms 1s484ms 11 2 2s543ms 1s271ms 12 1 1s226ms 1s226ms 13 1 1s252ms 1s252ms 14 1 1s303ms 1s303ms 15 1 1s290ms 1s290ms 16 1 1s247ms 1s247ms 17 2 2s505ms 1s252ms 18 1 1s265ms 1s265ms 20 1 1s300ms 1s300ms 21 1 1s271ms 1s271ms Jul 11 05 2 2s721ms 1s360ms 07 2 2s495ms 1s247ms 11 1 1s535ms 1s535ms 13 1 1s387ms 1s387ms 18 1 1s285ms 1s285ms 19 1 1s262ms 1s262ms 21 3 3s792ms 1s264ms Jul 12 00 1 1s241ms 1s241ms 04 1 1s516ms 1s516ms 05 4 5s244ms 1s311ms 07 1 1s291ms 1s291ms 08 1 1s302ms 1s302ms 09 1 1s341ms 1s341ms 10 1 1s263ms 1s263ms 11 1 1s248ms 1s248ms 17 1 1s244ms 1s244ms 19 1 1s233ms 1s233ms Jul 13 00 2 2s524ms 1s262ms 01 1 1s259ms 1s259ms 03 1 1s272ms 1s272ms 05 2 2s798ms 1s399ms 06 2 2s504ms 1s252ms 10 1 1s217ms 1s217ms 11 1 1s293ms 1s293ms 12 2 2s627ms 1s313ms 15 1 1s278ms 1s278ms 16 1 1s280ms 1s280ms 18 1 1s259ms 1s259ms [ User: pubeu - Total duration: 53s899ms - Times executed: 42 ]
[ User: qaeu - Total duration: 1s427ms - Times executed: 1 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-11 11:08:00 Duration: 1s535ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-12 04:29:05 Duration: 1s516ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-10 10:54:57 Duration: 1s484ms Bind query: yes
7 80 5m25s 1s199ms 38s568ms 4s68ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 07 01 2 5s670ms 2s835ms 07 1 1s980ms 1s980ms 09 2 4s277ms 2s138ms 11 1 2s582ms 2s582ms 16 1 2s634ms 2s634ms 20 2 7s574ms 3s787ms 21 1 23s395ms 23s395ms 22 1 13s21ms 13s21ms 23 1 1s389ms 1s389ms Jul 08 03 20 37s223ms 1s861ms 05 3 3s864ms 1s288ms 08 1 2s544ms 2s544ms 09 1 6s479ms 6s479ms 11 1 1s374ms 1s374ms 15 1 4s27ms 4s27ms 22 1 1s337ms 1s337ms Jul 09 01 1 1s952ms 1s952ms 02 22 58s39ms 2s638ms 11 1 2s319ms 2s319ms 16 1 4s976ms 4s976ms Jul 10 02 1 2s251ms 2s251ms 03 1 17s576ms 17s576ms 06 1 6s557ms 6s557ms 08 1 2s775ms 2s775ms 09 1 4s818ms 4s818ms 20 1 2s381ms 2s381ms 21 1 1s355ms 1s355ms Jul 11 02 1 2s273ms 2s273ms 11 1 17s486ms 17s486ms 21 3 1m7s 22s567ms Jul 12 14 1 5s898ms 5s898ms 17 1 2s993ms 2s993ms 20 1 4s738ms 4s738ms [ User: pubeu - Total duration: 2m9s - Times executed: 28 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 6232400;
Date: 2024-07-11 21:35:55 Duration: 38s568ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1093700;
Date: 2024-07-11 21:34:49 Duration: 26s998ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073988') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 2960900;
Date: 2024-07-07 21:26:06 Duration: 23s395ms Bind query: yes
8 74 4m3s 1s3ms 44s842ms 3s296ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 07 03 3 6s208ms 2s69ms 04 2 4s251ms 2s125ms 05 1 2s105ms 2s105ms 06 2 3s531ms 1s765ms 09 12 41s858ms 3s488ms 10 1 3s183ms 3s183ms 20 1 2s71ms 2s71ms 22 2 3s72ms 1s536ms Jul 08 03 1 4s380ms 4s380ms 11 20 1m6s 3s306ms Jul 09 00 2 3s99ms 1s549ms 01 4 9s550ms 2s387ms 03 1 44s842ms 44s842ms 18 1 1s81ms 1s81ms 21 2 4s748ms 2s374ms Jul 10 01 1 3s239ms 3s239ms 04 1 2s115ms 2s115ms 08 1 12s959ms 12s959ms 09 3 3s189ms 1s63ms 10 2 2s248ms 1s124ms 11 1 4s393ms 4s393ms 21 1 2s24ms 2s24ms 22 2 2s184ms 1s92ms Jul 11 22 2 3s955ms 1s977ms Jul 12 02 1 1s168ms 1s168ms 10 1 1s571ms 1s571ms 20 1 1s844ms 1s844ms Jul 13 09 1 1s32ms 1s32ms 17 1 1s926ms 1s926ms [ User: pubeu - Total duration: 3m3s - Times executed: 50 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-09 03:53:35 Duration: 44s842ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2074277') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-10 08:30:12 Duration: 12s959ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2079601') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-10 11:24:37 Duration: 4s393ms Database: ctdprd51 User: pubeu Bind query: yes
9 56 1m54s 1s40ms 5s64ms 2s47ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 07 03 1 1s343ms 1s343ms 06 1 2s393ms 2s393ms 09 4 4s819ms 1s204ms 12 1 1s48ms 1s48ms 22 1 1s529ms 1s529ms Jul 08 05 3 3s903ms 1s301ms 06 1 1s262ms 1s262ms 07 1 2s699ms 2s699ms 10 2 3s694ms 1s847ms 11 2 2s373ms 1s186ms 19 1 2s176ms 2s176ms 22 1 1s177ms 1s177ms Jul 09 02 1 2s554ms 2s554ms 03 2 3s231ms 1s615ms 04 1 1s94ms 1s94ms 10 1 2s542ms 2s542ms Jul 10 03 1 4s802ms 4s802ms 04 1 1s126ms 1s126ms 12 1 1s40ms 1s40ms 16 1 2s384ms 2s384ms 17 2 9s987ms 4s993ms 21 2 3s799ms 1s899ms 22 1 1s177ms 1s177ms Jul 11 00 1 2s212ms 2s212ms 01 1 2s549ms 2s549ms 02 1 2s348ms 2s348ms 03 2 5s626ms 2s813ms 04 2 3s560ms 1s780ms 05 1 1s220ms 1s220ms 06 1 2s9ms 2s9ms 07 2 9s553ms 4s776ms 10 1 2s560ms 2s560ms 18 1 1s57ms 1s57ms 19 1 1s175ms 1s175ms 20 1 2s315ms 2s315ms 21 1 2s166ms 2s166ms 22 2 7s71ms 3s535ms Jul 12 09 1 1s147ms 1s147ms 21 1 1s139ms 1s139ms Jul 13 09 1 1s86ms 1s86ms 13 1 1s309ms 1s309ms 20 1 2s411ms 2s411ms [ User: pubeu - Total duration: 1m22s - Times executed: 41 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2070528') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-10 17:47:28 Duration: 5s64ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2070528') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-10 17:50:11 Duration: 4s923ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2070354') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-10 03:28:01 Duration: 4s802ms Bind query: yes
10 53 1m11s 1s328ms 1s410ms 1s347ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 07 05 3 4s39ms 1s346ms 06 1 1s357ms 1s357ms 11 1 1s347ms 1s347ms 15 1 1s350ms 1s350ms Jul 08 00 1 1s345ms 1s345ms 02 1 1s340ms 1s340ms 05 3 4s38ms 1s346ms 16 1 1s341ms 1s341ms Jul 09 05 2 2s754ms 1s377ms 06 1 1s346ms 1s346ms 09 1 1s353ms 1s353ms 10 2 2s698ms 1s349ms 19 2 2s689ms 1s344ms 22 2 2s691ms 1s345ms Jul 10 00 1 1s360ms 1s360ms 04 1 1s339ms 1s339ms 05 1 1s328ms 1s328ms 07 1 1s340ms 1s340ms 22 1 1s341ms 1s341ms Jul 11 02 2 2s693ms 1s346ms 05 2 2s681ms 1s340ms 10 2 2s700ms 1s350ms 13 1 1s344ms 1s344ms 14 1 1s338ms 1s338ms 21 2 2s726ms 1s363ms 23 3 4s53ms 1s351ms Jul 12 02 1 1s341ms 1s341ms 05 2 2s697ms 1s348ms 10 3 4s23ms 1s341ms 15 1 1s366ms 1s366ms 22 1 1s342ms 1s342ms Jul 13 05 2 2s692ms 1s346ms 14 2 2s685ms 1s342ms 17 1 1s341ms 1s341ms [ User: pubeu - Total duration: 33s637ms - Times executed: 25 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-09 05:38:31 Duration: 1s410ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-12 15:06:55 Duration: 1s366ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-11 21:56:49 Duration: 1s363ms Bind query: yes
11 41 1m30s 1s16ms 3s428ms 2s203ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 07 02 1 2s204ms 2s204ms 05 4 8s772ms 2s193ms Jul 08 03 1 3s254ms 3s254ms 05 4 8s713ms 2s178ms 11 1 1s980ms 1s980ms Jul 09 05 4 8s772ms 2s193ms 06 1 1s878ms 1s878ms 12 1 1s902ms 1s902ms Jul 10 05 4 8s796ms 2s199ms 23 1 1s892ms 1s892ms Jul 11 05 4 8s792ms 2s198ms 13 2 4s443ms 2s221ms 21 2 4s521ms 2s260ms Jul 12 02 1 3s240ms 3s240ms 05 4 8s726ms 2s181ms Jul 13 05 4 8s710ms 2s177ms 12 2 3s758ms 1s879ms [ User: pubeu - Total duration: 42s628ms - Times executed: 14 ]
[ User: qaeu - Total duration: 23s357ms - Times executed: 7 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-11 21:54:59 Duration: 3s428ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-09 05:35:12 Duration: 3s376ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-11 13:47:02 Duration: 3s359ms Database: ctdprd51 User: pubeu Bind query: yes
12 40 2h2m31s 1s524ms 9m7s 3m3s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 08 02 4 34m36s 8m39s 13 1 1m51s 1m51s Jul 09 02 1 3m37s 3m37s Jul 10 02 2 3m38s 1m49s 17 2 4m10s 2m5s Jul 11 02 3 3m40s 1m13s 09 1 8m27s 8m27s Jul 12 09 1 1s561ms 1s561ms 12 8 28m6s 3m30s 13 12 34m11s 2m50s 21 1 1s561ms 1s561ms Jul 13 06 1 1s535ms 1s535ms 09 1 1s585ms 1s585ms 11 1 3s137ms 3s137ms 20 1 1s589ms 1s589ms [ User: pubeu - Total duration: 1h29m38s - Times executed: 26 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:37:14 Duration: 9m7s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:36:49 Duration: 8m31s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:36:13 Duration: 8m28s Database: ctdprd51 User: pubeu Bind query: yes
13 33 45s51ms 1s41ms 1s779ms 1s365ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by fg.nm_sort, tg.nm_sort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 07 05 4 6s148ms 1s537ms 19 1 1s224ms 1s224ms Jul 08 05 4 5s481ms 1s370ms Jul 09 05 4 5s735ms 1s433ms Jul 10 05 4 5s168ms 1s292ms Jul 11 05 4 5s561ms 1s390ms 13 2 2s298ms 1s149ms 21 2 2s182ms 1s91ms Jul 12 05 4 5s633ms 1s408ms Jul 13 05 4 5s615ms 1s403ms [ User: pubeu - Total duration: 8s906ms - Times executed: 6 ]
[ User: qaeu - Total duration: 8s211ms - Times executed: 6 ]
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-07-10 05:38:16 Duration: 1s779ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-07-07 05:43:07 Duration: 1s690ms Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-07-07 05:38:07 Duration: 1s627ms Database: ctdprd51 User: pubeu Bind query: yes
14 25 13m49s 32s626ms 33s307ms 33s180ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 07 06 1 33s230ms 33s230ms 10 1 33s307ms 33s307ms 14 1 33s274ms 33s274ms 18 1 33s128ms 33s128ms Jul 08 06 1 33s141ms 33s141ms 10 1 33s191ms 33s191ms 14 1 33s107ms 33s107ms 18 1 33s297ms 33s297ms Jul 09 06 1 33s133ms 33s133ms 10 1 33s206ms 33s206ms 14 1 33s206ms 33s206ms 18 1 33s231ms 33s231ms Jul 10 06 1 33s112ms 33s112ms 10 1 33s199ms 33s199ms 14 1 33s155ms 33s155ms 18 1 33s276ms 33s276ms Jul 11 06 1 33s168ms 33s168ms 10 1 33s209ms 33s209ms 14 1 33s137ms 33s137ms 18 1 33s221ms 33s221ms Jul 12 06 1 33s254ms 33s254ms 10 1 33s206ms 33s206ms 14 1 33s269ms 33s269ms 18 1 33s210ms 33s210ms Jul 13 19 1 32s626ms 32s626ms [ User: postgres - Total duration: 13m16s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m16s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-07 10:05:35 Duration: 33s307ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-08 18:05:35 Duration: 33s297ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-10 18:05:35 Duration: 33s276ms Database: ctdprd51 User: postgres Application: pg_dump
15 25 5m53s 14s21ms 14s259ms 14s134ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 07 06 1 14s177ms 14s177ms 10 1 14s120ms 14s120ms 14 1 14s102ms 14s102ms 18 1 14s81ms 14s81ms Jul 08 06 1 14s183ms 14s183ms 10 1 14s178ms 14s178ms 14 1 14s161ms 14s161ms 18 1 14s108ms 14s108ms Jul 09 06 1 14s140ms 14s140ms 10 1 14s144ms 14s144ms 14 1 14s173ms 14s173ms 18 1 14s154ms 14s154ms Jul 10 06 1 14s211ms 14s211ms 10 1 14s164ms 14s164ms 14 1 14s87ms 14s87ms 18 1 14s37ms 14s37ms Jul 11 06 1 14s161ms 14s161ms 10 1 14s113ms 14s113ms 14 1 14s259ms 14s259ms 18 1 14s150ms 14s150ms Jul 12 06 1 14s111ms 14s111ms 10 1 14s96ms 14s96ms 14 1 14s82ms 14s82ms 18 1 14s136ms 14s136ms Jul 13 18 1 14s21ms 14s21ms [ User: postgres - Total duration: 5m53s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m53s - Times executed: 25 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:15 Duration: 14s259ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 06:00:16 Duration: 14s211ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 06:00:16 Duration: 14s183ms Database: ctdprd51 User: postgres Application: pg_dump
16 24 3m8s 7s732ms 8s8ms 7s853ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 07 06 1 7s829ms 7s829ms 10 1 7s833ms 7s833ms 14 1 7s846ms 7s846ms 18 1 7s821ms 7s821ms Jul 08 06 1 7s825ms 7s825ms 10 1 7s839ms 7s839ms 14 1 7s872ms 7s872ms 18 1 7s936ms 7s936ms Jul 09 06 1 7s839ms 7s839ms 10 1 7s859ms 7s859ms 14 1 7s827ms 7s827ms 18 1 7s881ms 7s881ms Jul 10 06 1 7s823ms 7s823ms 10 1 7s862ms 7s862ms 14 1 7s830ms 7s830ms 18 1 7s866ms 7s866ms Jul 11 06 1 7s851ms 7s851ms 10 1 7s861ms 7s861ms 14 1 7s857ms 7s857ms Jul 12 06 1 7s833ms 7s833ms 10 1 7s858ms 7s858ms 14 1 7s892ms 7s892ms 18 1 8s8ms 8s8ms Jul 13 19 1 7s732ms 7s732ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-12 18:05:42 Duration: 8s8ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-08 18:05:43 Duration: 7s936ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-12 14:05:43 Duration: 7s892ms
17 24 2m11s 5s446ms 5s532ms 5s468ms copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 07 06 1 5s478ms 5s478ms 10 1 5s449ms 5s449ms 14 1 5s456ms 5s456ms 18 1 5s455ms 5s455ms Jul 08 06 1 5s466ms 5s466ms 10 1 5s464ms 5s464ms 14 1 5s494ms 5s494ms 18 1 5s452ms 5s452ms Jul 09 10 1 5s463ms 5s463ms 14 1 5s481ms 5s481ms 18 1 5s463ms 5s463ms Jul 10 06 1 5s464ms 5s464ms 10 1 5s532ms 5s532ms 14 1 5s454ms 5s454ms 18 1 5s449ms 5s449ms Jul 11 06 1 5s473ms 5s473ms 10 1 5s451ms 5s451ms 14 1 5s506ms 5s506ms 18 1 5s473ms 5s473ms Jul 12 06 1 5s455ms 5s455ms 10 1 5s468ms 5s468ms 14 1 5s482ms 5s482ms 18 1 5s468ms 5s468ms Jul 13 18 1 5s446ms 5s446ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 10:00:30 Duration: 5s532ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:30 Duration: 5s506ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 14:00:30 Duration: 5s494ms
18 24 24s522ms 1s9ms 1s95ms 1s21ms copy edit.reference_party_role (reference_id, reference_party_id, list_seq, create_by, create_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 07 06 1 1s18ms 1s18ms 10 1 1s14ms 1s14ms 14 1 1s9ms 1s9ms 18 1 1s15ms 1s15ms Jul 08 06 1 1s20ms 1s20ms 10 1 1s23ms 1s23ms 14 1 1s17ms 1s17ms 18 1 1s13ms 1s13ms Jul 09 06 1 1s17ms 1s17ms 10 1 1s13ms 1s13ms 14 1 1s23ms 1s23ms 18 1 1s95ms 1s95ms Jul 10 06 1 1s11ms 1s11ms 10 1 1s40ms 1s40ms 14 1 1s23ms 1s23ms 18 1 1s10ms 1s10ms Jul 11 06 1 1s12ms 1s12ms 10 1 1s32ms 1s32ms 18 1 1s19ms 1s19ms Jul 12 06 1 1s12ms 1s12ms 10 1 1s27ms 1s27ms 14 1 1s10ms 1s10ms 18 1 1s9ms 1s9ms Jul 13 18 1 1s29ms 1s29ms -
COPY edit.reference_party_role (reference_id, reference_party_id, list_seq, create_by, create_tm) TO stdout;
Date: 2024-07-09 18:01:10 Duration: 1s95ms
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COPY edit.reference_party_role (reference_id, reference_party_id, list_seq, create_by, create_tm) TO stdout;
Date: 2024-07-10 10:01:11 Duration: 1s40ms
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COPY edit.reference_party_role (reference_id, reference_party_id, list_seq, create_by, create_tm) TO stdout;
Date: 2024-07-11 10:01:11 Duration: 1s32ms
19 23 5m22s 13s966ms 14s176ms 14s17ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 07 06 1 14s4ms 14s4ms 10 1 13s998ms 13s998ms 14 1 13s990ms 13s990ms 18 1 14s13ms 14s13ms Jul 08 10 1 14s176ms 14s176ms 14 1 14s67ms 14s67ms 18 1 13s977ms 13s977ms Jul 09 06 1 13s966ms 13s966ms 10 1 13s986ms 13s986ms 14 1 14s52ms 14s52ms 18 1 13s985ms 13s985ms Jul 10 06 1 14s44ms 14s44ms 10 1 13s992ms 13s992ms 14 1 14s23ms 14s23ms 18 1 14s36ms 14s36ms Jul 11 10 1 13s985ms 13s985ms 14 1 14s8ms 14s8ms 18 1 13s989ms 13s989ms Jul 12 06 1 14s77ms 14s77ms 10 1 14s9ms 14s9ms 14 1 14s30ms 14s30ms 18 1 13s975ms 13s975ms Jul 13 18 1 14s13ms 14s13ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 10:00:58 Duration: 14s176ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-12 06:00:57 Duration: 14s77ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 14:00:58 Duration: 14s67ms
20 23 2m31s 6s569ms 6s632ms 6s598ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 07 06 1 6s632ms 6s632ms 10 1 6s588ms 6s588ms 14 1 6s590ms 6s590ms 18 1 6s582ms 6s582ms Jul 08 10 1 6s610ms 6s610ms 14 1 6s613ms 6s613ms 18 1 6s576ms 6s576ms Jul 09 06 1 6s613ms 6s613ms 10 1 6s579ms 6s579ms 14 1 6s619ms 6s619ms 18 1 6s600ms 6s600ms Jul 10 06 1 6s597ms 6s597ms 10 1 6s627ms 6s627ms 14 1 6s601ms 6s601ms 18 1 6s574ms 6s574ms Jul 11 06 1 6s605ms 6s605ms 10 1 6s583ms 6s583ms 14 1 6s620ms 6s620ms Jul 12 06 1 6s585ms 6s585ms 10 1 6s596ms 6s596ms 14 1 6s595ms 6s595ms 18 1 6s598ms 6s598ms Jul 13 18 1 6s569ms 6s569ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-07 06:00:25 Duration: 6s632ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 10:00:24 Duration: 6s627ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:24 Duration: 6s620ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 50m33s 50m33s 50m33s 1 50m33s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 11 04 1 50m33s 50m33s -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'HYPERTENSION, PULMONARY' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-11 04:28:46 Duration: 50m33s Bind query: yes
2 23m23s 23m23s 23m23s 1 23m23s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 13 19 1 23m23s 23m23s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-13 19:41:28 Duration: 23m23s
3 23m12s 23m12s 23m12s 1 23m12s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 13 19 1 23m12s 23m12s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-13 19:00:03 Duration: 23m12s
4 16m16s 16m20s 16m17s 7 1h54m5s select maint_query_logs_archive ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 07 00 1 16m17s 16m17s Jul 08 00 1 16m16s 16m16s Jul 09 00 1 16m16s 16m16s Jul 10 00 1 16m20s 16m20s Jul 11 00 1 16m16s 16m16s Jul 12 00 1 16m19s 16m19s Jul 13 00 1 16m18s 16m18s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-10 00:16:22 Duration: 16m20s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-12 00:16:20 Duration: 16m19s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-13 00:16:19 Duration: 16m18s
5 10m6s 10m49s 10m20s 5 51m41s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 09 02 2 20m15s 10m7s Jul 10 05 2 21m5s 10m32s 06 1 10m21s 10m21s [ User: pubeu - Total duration: 31m20s - Times executed: 3 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-07-10 05:47:11 Duration: 10m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-07-10 06:09:30 Duration: 10m21s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALUMENIN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA04390' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'PACLITAXEL' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2024-07-10 05:58:00 Duration: 10m15s Bind query: yes
6 10m3s 10m46s 10m18s 5 51m30s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by i.sort_txt, g.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 08 07 1 10m3s 10m3s Jul 10 05 4 41m27s 10m21s [ User: pubeu - Total duration: 21m1s - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-10 05:43:38 Duration: 10m46s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-10 05:31:45 Duration: 10m15s Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'CALU') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA_M00683' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'CISPLATIN' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY i.sort_txt, g.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-10 05:08:56 Duration: 10m15s Database: ctdprd51 User: pubeu Bind query: yes
7 6m41s 6m41s 6m41s 1 6m41s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 13 19 1 6m41s 6m41s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-13 19:52:56 Duration: 6m41s
8 6m39s 6m39s 6m39s 1 6m39s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 13 19 1 6m39s 6m39s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-13 19:11:30 Duration: 6m39s
9 1s524ms 9m7s 3m3s 40 2h2m31s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 08 02 4 34m36s 8m39s 13 1 1m51s 1m51s Jul 09 02 1 3m37s 3m37s Jul 10 02 2 3m38s 1m49s 17 2 4m10s 2m5s Jul 11 02 3 3m40s 1m13s 09 1 8m27s 8m27s Jul 12 09 1 1s561ms 1s561ms 12 8 28m6s 3m30s 13 12 34m11s 2m50s 21 1 1s561ms 1s561ms Jul 13 06 1 1s535ms 1s535ms 09 1 1s585ms 1s585ms 11 1 3s137ms 3s137ms 20 1 1s589ms 1s589ms [ User: pubeu - Total duration: 1h29m38s - Times executed: 26 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:37:14 Duration: 9m7s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:36:49 Duration: 8m31s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1253166') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-08 02:36:13 Duration: 8m28s Database: ctdprd51 User: pubeu Bind query: yes
10 32s626ms 33s307ms 33s180ms 25 13m49s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 07 06 1 33s230ms 33s230ms 10 1 33s307ms 33s307ms 14 1 33s274ms 33s274ms 18 1 33s128ms 33s128ms Jul 08 06 1 33s141ms 33s141ms 10 1 33s191ms 33s191ms 14 1 33s107ms 33s107ms 18 1 33s297ms 33s297ms Jul 09 06 1 33s133ms 33s133ms 10 1 33s206ms 33s206ms 14 1 33s206ms 33s206ms 18 1 33s231ms 33s231ms Jul 10 06 1 33s112ms 33s112ms 10 1 33s199ms 33s199ms 14 1 33s155ms 33s155ms 18 1 33s276ms 33s276ms Jul 11 06 1 33s168ms 33s168ms 10 1 33s209ms 33s209ms 14 1 33s137ms 33s137ms 18 1 33s221ms 33s221ms Jul 12 06 1 33s254ms 33s254ms 10 1 33s206ms 33s206ms 14 1 33s269ms 33s269ms 18 1 33s210ms 33s210ms Jul 13 19 1 32s626ms 32s626ms [ User: postgres - Total duration: 13m16s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m16s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-07 10:05:35 Duration: 33s307ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-08 18:05:35 Duration: 33s297ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-10 18:05:35 Duration: 33s276ms Database: ctdprd51 User: postgres Application: pg_dump
11 6s827ms 41s276ms 18s532ms 10 3m5s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 09 04 9 2m58s 19s833ms Jul 12 08 1 6s827ms 6s827ms [ User: pubeu - Total duration: 1m16s - Times executed: 5 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ARTENIMOL' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-09 04:23:42 Duration: 41s276ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ARTENIMOL' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-09 04:23:42 Duration: 40s684ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ARTENIMOL' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-09 04:23:38 Duration: 40s654ms Bind query: yes
12 14s21ms 14s259ms 14s134ms 25 5m53s copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 07 06 1 14s177ms 14s177ms 10 1 14s120ms 14s120ms 14 1 14s102ms 14s102ms 18 1 14s81ms 14s81ms Jul 08 06 1 14s183ms 14s183ms 10 1 14s178ms 14s178ms 14 1 14s161ms 14s161ms 18 1 14s108ms 14s108ms Jul 09 06 1 14s140ms 14s140ms 10 1 14s144ms 14s144ms 14 1 14s173ms 14s173ms 18 1 14s154ms 14s154ms Jul 10 06 1 14s211ms 14s211ms 10 1 14s164ms 14s164ms 14 1 14s87ms 14s87ms 18 1 14s37ms 14s37ms Jul 11 06 1 14s161ms 14s161ms 10 1 14s113ms 14s113ms 14 1 14s259ms 14s259ms 18 1 14s150ms 14s150ms Jul 12 06 1 14s111ms 14s111ms 10 1 14s96ms 14s96ms 14 1 14s82ms 14s82ms 18 1 14s136ms 14s136ms Jul 13 18 1 14s21ms 14s21ms [ User: postgres - Total duration: 5m53s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m53s - Times executed: 25 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:15 Duration: 14s259ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 06:00:16 Duration: 14s211ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 06:00:16 Duration: 14s183ms Database: ctdprd51 User: postgres Application: pg_dump
13 13s966ms 14s176ms 14s17ms 23 5m22s copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 07 06 1 14s4ms 14s4ms 10 1 13s998ms 13s998ms 14 1 13s990ms 13s990ms 18 1 14s13ms 14s13ms Jul 08 10 1 14s176ms 14s176ms 14 1 14s67ms 14s67ms 18 1 13s977ms 13s977ms Jul 09 06 1 13s966ms 13s966ms 10 1 13s986ms 13s986ms 14 1 14s52ms 14s52ms 18 1 13s985ms 13s985ms Jul 10 06 1 14s44ms 14s44ms 10 1 13s992ms 13s992ms 14 1 14s23ms 14s23ms 18 1 14s36ms 14s36ms Jul 11 10 1 13s985ms 13s985ms 14 1 14s8ms 14s8ms 18 1 13s989ms 13s989ms Jul 12 06 1 14s77ms 14s77ms 10 1 14s9ms 14s9ms 14 1 14s30ms 14s30ms 18 1 13s975ms 13s975ms Jul 13 18 1 14s13ms 14s13ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 10:00:58 Duration: 14s176ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-12 06:00:57 Duration: 14s77ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 14:00:58 Duration: 14s67ms
14 13s296ms 13s478ms 13s365ms 22 4m54s copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 07 06 1 13s366ms 13s366ms 10 1 13s296ms 13s296ms 14 1 13s338ms 13s338ms 18 1 13s342ms 13s342ms Jul 08 06 1 13s408ms 13s408ms 14 1 13s398ms 13s398ms 18 1 13s338ms 13s338ms Jul 09 10 1 13s342ms 13s342ms 14 1 13s378ms 13s378ms 18 1 13s346ms 13s346ms Jul 10 10 1 13s478ms 13s478ms 14 1 13s355ms 13s355ms 18 1 13s314ms 13s314ms Jul 11 06 1 13s390ms 13s390ms 10 1 13s345ms 13s345ms 14 1 13s425ms 13s425ms 18 1 13s363ms 13s363ms Jul 12 06 1 13s395ms 13s395ms 10 1 13s371ms 13s371ms 14 1 13s359ms 13s359ms 18 1 13s369ms 13s369ms Jul 13 18 1 13s308ms 13s308ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 10:00:43 Duration: 13s478ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:43 Duration: 13s425ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 06:00:43 Duration: 13s408ms
15 7s732ms 8s8ms 7s853ms 24 3m8s copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 07 06 1 7s829ms 7s829ms 10 1 7s833ms 7s833ms 14 1 7s846ms 7s846ms 18 1 7s821ms 7s821ms Jul 08 06 1 7s825ms 7s825ms 10 1 7s839ms 7s839ms 14 1 7s872ms 7s872ms 18 1 7s936ms 7s936ms Jul 09 06 1 7s839ms 7s839ms 10 1 7s859ms 7s859ms 14 1 7s827ms 7s827ms 18 1 7s881ms 7s881ms Jul 10 06 1 7s823ms 7s823ms 10 1 7s862ms 7s862ms 14 1 7s830ms 7s830ms 18 1 7s866ms 7s866ms Jul 11 06 1 7s851ms 7s851ms 10 1 7s861ms 7s861ms 14 1 7s857ms 7s857ms Jul 12 06 1 7s833ms 7s833ms 10 1 7s858ms 7s858ms 14 1 7s892ms 7s892ms 18 1 8s8ms 8s8ms Jul 13 19 1 7s732ms 7s732ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-12 18:05:42 Duration: 8s8ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-08 18:05:43 Duration: 7s936ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2024-07-12 14:05:43 Duration: 7s892ms
16 6s569ms 6s632ms 6s598ms 23 2m31s copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 07 06 1 6s632ms 6s632ms 10 1 6s588ms 6s588ms 14 1 6s590ms 6s590ms 18 1 6s582ms 6s582ms Jul 08 10 1 6s610ms 6s610ms 14 1 6s613ms 6s613ms 18 1 6s576ms 6s576ms Jul 09 06 1 6s613ms 6s613ms 10 1 6s579ms 6s579ms 14 1 6s619ms 6s619ms 18 1 6s600ms 6s600ms Jul 10 06 1 6s597ms 6s597ms 10 1 6s627ms 6s627ms 14 1 6s601ms 6s601ms 18 1 6s574ms 6s574ms Jul 11 06 1 6s605ms 6s605ms 10 1 6s583ms 6s583ms 14 1 6s620ms 6s620ms Jul 12 06 1 6s585ms 6s585ms 10 1 6s596ms 6s596ms 14 1 6s595ms 6s595ms 18 1 6s598ms 6s598ms Jul 13 18 1 6s569ms 6s569ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-07 06:00:25 Duration: 6s632ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 10:00:24 Duration: 6s627ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:24 Duration: 6s620ms
17 5s446ms 5s532ms 5s468ms 24 2m11s copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 07 06 1 5s478ms 5s478ms 10 1 5s449ms 5s449ms 14 1 5s456ms 5s456ms 18 1 5s455ms 5s455ms Jul 08 06 1 5s466ms 5s466ms 10 1 5s464ms 5s464ms 14 1 5s494ms 5s494ms 18 1 5s452ms 5s452ms Jul 09 10 1 5s463ms 5s463ms 14 1 5s481ms 5s481ms 18 1 5s463ms 5s463ms Jul 10 06 1 5s464ms 5s464ms 10 1 5s532ms 5s532ms 14 1 5s454ms 5s454ms 18 1 5s449ms 5s449ms Jul 11 06 1 5s473ms 5s473ms 10 1 5s451ms 5s451ms 14 1 5s506ms 5s506ms 18 1 5s473ms 5s473ms Jul 12 06 1 5s455ms 5s455ms 10 1 5s468ms 5s468ms 14 1 5s482ms 5s482ms 18 1 5s468ms 5s468ms Jul 13 18 1 5s446ms 5s446ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-10 10:00:30 Duration: 5s532ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-11 14:00:30 Duration: 5s506ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-08 14:00:30 Duration: 5s494ms
18 1s1ms 6s130ms 4s586ms 96 7m20s select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 07 04 1 1s67ms 1s67ms 09 1 1s20ms 1s20ms 12 1 5s176ms 5s176ms 14 2 10s175ms 5s87ms 18 2 6s162ms 3s81ms 22 4 16s735ms 4s183ms Jul 08 00 1 5s144ms 5s144ms 01 1 5s261ms 5s261ms 03 1 5s203ms 5s203ms 08 1 5s145ms 5s145ms 09 2 10s523ms 5s261ms 11 2 6s296ms 3s148ms 13 1 5s275ms 5s275ms 17 1 5s188ms 5s188ms 22 1 5s202ms 5s202ms Jul 09 01 4 16s906ms 4s226ms 02 1 1s11ms 1s11ms 03 1 5s137ms 5s137ms 10 1 5s159ms 5s159ms 12 1 1s16ms 1s16ms 13 1 5s179ms 5s179ms 16 1 6s130ms 6s130ms 17 1 5s551ms 5s551ms 22 2 10s359ms 5s179ms 23 2 10s224ms 5s112ms Jul 10 03 1 5s245ms 5s245ms 04 2 10s698ms 5s349ms 05 1 1s4ms 1s4ms 06 3 15s730ms 5s243ms 08 1 5s260ms 5s260ms 09 3 16s349ms 5s449ms 10 2 10s763ms 5s381ms 11 1 5s259ms 5s259ms 14 4 16s602ms 4s150ms 15 1 5s142ms 5s142ms 22 6 31s915ms 5s319ms Jul 11 01 2 10s310ms 5s155ms 05 1 5s296ms 5s296ms 13 1 1s1ms 1s1ms 16 1 5s347ms 5s347ms 22 3 15s968ms 5s322ms Jul 12 05 1 4s986ms 4s986ms 06 1 5s47ms 5s47ms 09 2 6s66ms 3s33ms 12 1 5s293ms 5s293ms 22 1 5s36ms 5s36ms 23 1 5s155ms 5s155ms Jul 13 01 3 7s244ms 2s414ms 03 1 5s206ms 5s206ms 07 4 20s615ms 5s153ms 08 1 5s177ms 5s177ms 09 1 1s12ms 1s12ms 10 2 10s424ms 5s212ms 11 2 10s510ms 5s255ms 12 2 10s438ms 5s219ms 14 2 10s410ms 5s205ms 20 1 5s565ms 5s565ms [ User: pubeu - Total duration: 4m23s - Times executed: 59 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1400273' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-09 16:36:18 Duration: 6s130ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1400273' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-10 09:52:34 Duration: 5s834ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1410064' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-09 01:48:08 Duration: 5s568ms Bind query: yes
19 3s866ms 16s390ms 4s87ms 506 34m28s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 07 00 1 3s923ms 3s923ms 01 1 3s938ms 3s938ms 03 1 4s136ms 4s136ms 04 10 39s522ms 3s952ms 05 2 7s818ms 3s909ms 06 3 12s257ms 4s85ms 07 1 3s924ms 3s924ms 08 7 27s880ms 3s982ms 09 1 3s962ms 3s962ms 10 1 4s70ms 4s70ms 14 2 7s817ms 3s908ms 16 1 3s927ms 3s927ms 17 2 9s388ms 4s694ms 20 4 15s949ms 3s987ms 21 11 43s616ms 3s965ms 22 1 3s916ms 3s916ms 23 1 4s17ms 4s17ms Jul 08 03 5 20s468ms 4s93ms 05 1 4s406ms 4s406ms 06 1 4s31ms 4s31ms 07 1 4s68ms 4s68ms 08 2 8s21ms 4s10ms 09 4 16s25ms 4s6ms 10 1 4s327ms 4s327ms 16 1 3s915ms 3s915ms 17 3 12s429ms 4s143ms 21 4 15s786ms 3s946ms 22 6 23s939ms 3s989ms Jul 09 00 4 15s956ms 3s989ms 01 5 19s858ms 3s971ms 02 2 7s829ms 3s914ms 03 1 3s914ms 3s914ms 04 2 7s903ms 3s951ms 06 6 24s129ms 4s21ms 07 1 3s928ms 3s928ms 08 5 20s38ms 4s7ms 09 2 8s107ms 4s53ms 10 1 3s955ms 3s955ms 11 5 19s723ms 3s944ms 12 3 12s49ms 4s16ms 13 3 11s856ms 3s952ms 16 1 3s921ms 3s921ms 17 2 7s824ms 3s912ms 19 1 3s920ms 3s920ms 20 1 4s217ms 4s217ms 22 1 3s944ms 3s944ms 23 1 4s46ms 4s46ms Jul 10 00 1 4s129ms 4s129ms 01 4 15s796ms 3s949ms 02 11 44s61ms 4s5ms 03 8 31s668ms 3s958ms 04 1 3s902ms 3s902ms 05 4 16s933ms 4s233ms 06 2 8s55ms 4s27ms 07 1 4s3ms 4s3ms 08 3 11s956ms 3s985ms 09 2 8s453ms 4s226ms 10 2 7s963ms 3s981ms 12 2 7s883ms 3s941ms 13 3 22s389ms 7s463ms 14 3 11s772ms 3s924ms 15 3 11s831ms 3s943ms 16 2 7s944ms 3s972ms 20 25 1m41s 4s48ms 21 1 4s56ms 4s56ms Jul 11 02 3 11s864ms 3s954ms 03 1 4s94ms 4s94ms 04 10 39s754ms 3s975ms 05 2 7s915ms 3s957ms 06 4 32s797ms 8s199ms 07 4 15s690ms 3s922ms 08 1 3s939ms 3s939ms 09 1 3s982ms 3s982ms 10 1 3s930ms 3s930ms 12 3 11s810ms 3s936ms 13 2 7s870ms 3s935ms 14 5 19s844ms 3s968ms 15 3 11s861ms 3s953ms 16 4 15s873ms 3s968ms 19 2 8s50ms 4s25ms 23 2 7s926ms 3s963ms Jul 12 00 8 31s867ms 3s983ms 01 11 43s780ms 3s980ms 02 7 28s61ms 4s8ms 03 11 43s430ms 3s948ms 04 12 55s975ms 4s664ms 05 11 44s804ms 4s73ms 06 26 1m43s 3s969ms 07 11 43s337ms 3s939ms 08 11 43s519ms 3s956ms 09 1 3s887ms 3s887ms 10 1 3s961ms 3s961ms 11 2 8s117ms 4s58ms 12 1 3s976ms 3s976ms 13 2 20s395ms 10s197ms 14 2 8s70ms 4s35ms 15 1 3s916ms 3s916ms 16 4 16s762ms 4s190ms 17 4 15s986ms 3s996ms 18 1 3s941ms 3s941ms 19 11 44s564ms 4s51ms 23 1 3s930ms 3s930ms Jul 13 00 1 4s129ms 4s129ms 01 1 3s896ms 3s896ms 03 1 3s906ms 3s906ms 04 9 35s809ms 3s978ms 05 21 1m22s 3s949ms 06 20 1m18s 3s937ms 07 23 1m31s 3s978ms 08 16 1m3s 3s939ms 09 1 3s971ms 3s971ms 11 1 3s963ms 3s963ms 12 2 7s919ms 3s959ms 13 1 4s82ms 4s82ms 14 2 8s10ms 4s5ms 15 1 4s146ms 4s146ms 16 8 32s509ms 4s63ms 17 2 8s330ms 4s165ms 18 1 3s937ms 3s937ms 20 1 3s980ms 3s980ms 22 2 7s945ms 3s972ms 23 1 4s140ms 4s140ms [ User: pubeu - Total duration: 18m7s - Times executed: 268 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-12 13:27:27 Duration: 16s390ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-11 06:43:02 Duration: 15s865ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1428329') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1428329') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-10 13:59:31 Duration: 14s52ms Bind query: yes
20 1s199ms 38s568ms 4s68ms 80 5m25s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 07 01 2 5s670ms 2s835ms 07 1 1s980ms 1s980ms 09 2 4s277ms 2s138ms 11 1 2s582ms 2s582ms 16 1 2s634ms 2s634ms 20 2 7s574ms 3s787ms 21 1 23s395ms 23s395ms 22 1 13s21ms 13s21ms 23 1 1s389ms 1s389ms Jul 08 03 20 37s223ms 1s861ms 05 3 3s864ms 1s288ms 08 1 2s544ms 2s544ms 09 1 6s479ms 6s479ms 11 1 1s374ms 1s374ms 15 1 4s27ms 4s27ms 22 1 1s337ms 1s337ms Jul 09 01 1 1s952ms 1s952ms 02 22 58s39ms 2s638ms 11 1 2s319ms 2s319ms 16 1 4s976ms 4s976ms Jul 10 02 1 2s251ms 2s251ms 03 1 17s576ms 17s576ms 06 1 6s557ms 6s557ms 08 1 2s775ms 2s775ms 09 1 4s818ms 4s818ms 20 1 2s381ms 2s381ms 21 1 1s355ms 1s355ms Jul 11 02 1 2s273ms 2s273ms 11 1 17s486ms 17s486ms 21 3 1m7s 22s567ms Jul 12 14 1 5s898ms 5s898ms 17 1 2s993ms 2s993ms 20 1 4s738ms 4s738ms [ User: pubeu - Total duration: 2m9s - Times executed: 28 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 6232400;
Date: 2024-07-11 21:35:55 Duration: 38s568ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1093700;
Date: 2024-07-11 21:34:49 Duration: 26s998ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073988') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 2960900;
Date: 2024-07-07 21:26:06 Duration: 23s395ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 109 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Jul 07 00 1 0ms 0ms 06 4 0ms 0ms 08 2 0ms 0ms Jul 08 06 2 0ms 0ms 07 2 0ms 0ms 10 4 0ms 0ms 13 2 0ms 0ms 14 2 0ms 0ms Jul 09 06 2 0ms 0ms 08 2 0ms 0ms 17 4 0ms 0ms 23 2 0ms 0ms Jul 10 05 4 0ms 0ms 06 6 0ms 0ms 07 2 0ms 0ms 09 2 0ms 0ms 10 14 0ms 0ms 11 6 0ms 0ms 15 4 0ms 0ms 16 2 0ms 0ms Jul 11 05 2 0ms 0ms 06 8 0ms 0ms 07 6 0ms 0ms Jul 12 06 9 0ms 0ms 07 3 0ms 0ms 08 3 0ms 0ms 09 3 0ms 0ms 12 3 0ms 0ms 13 3 0ms 0ms [ User: pubeu - Total duration: 2m32s - Times executed: 65 ]
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;
Date: Duration: 0ms Database: postgres parameters: $1 = '1388675', $2 = '1388675', $3 = 'chem%'
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Events
Log levels
Key values
- 135,374 Log entries
Events distribution
Key values
- 0 PANIC entries
- 0 FATAL entries
- 8 ERROR entries
- 0 WARNING entries
Most Frequent Errors/Events
Key values
- 4 Max number of times the same event was reported
- 8 Total events found
Rank Times reported Error 1 4 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #1
Day Hour Count Jul 10 18 3 Jul 11 20 1 2 3 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #2
Day Hour Count Jul 11 09 3 - ERROR: column "acc_cd_cd" does not exist at character 199
- ERROR: column "phenotype_id" does not exist at character 17
- ERROR: column "phenotype_id" does not exist at character 67
Hint: Perhaps you meant to reference the column "term.acc_db_cd".
Statement: select count(distinct phenotype_id) from pub2.phenotype_term_reference where source_cd in ( 'C', 'I' ) and phenotype_id not in ( select id from pub2.term where object_type_id = 5 and acc_cd_cd = 'GO' and nm like 'obsolete%' ) limit 100Date: 2024-07-11 09:20:39
Statement: select distinct phenotype_id from pub2.exp_receptor where phenotype_id is not null
Date: 2024-07-11 09:41:41
Statement: select * -- distinct phenotype_id from pub2.exp_receptor where phenotype_id is not null limit 100
Date: 2024-07-11 09:43:04
3 1 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #3
Day Hour Count Jul 11 09 1 - ERROR: syntax error at or near "where" at character 571
Statement: select count(*) from ( select distinct phenotype_id from pub2.phenotype_term_reference where source_cd in ( 'C', 'I' ) and phenotype_id not in ( select id from pub2.term where object_type_id = 5 and acc_db_cd = 'GO' and nm like 'obsolete%' ) union select distinct phenotype_id from pub2.exp_outcome where phenotype_id is not null and phenotype_id not in ( select id from pub2.term where object_type_id = 5 and acc_db_cd = 'GO' and nm like 'obsolete%' ) union select distinct term_id from pub2.exp_receptor where object_type_id = 5 where term_id is not null and term_id not in ( select id from pub2.term where object_type_id = 5 and acc_db_cd = 'GO' and nm like 'obsolete%' ) ) as CTD_GO_TERM_COUNT
Date: 2024-07-11 09:46:34