pgBadger-
Global information
- Generated on Sun Jul 21 04:15:17 2024
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20240720
- Parsed 148,525 log entries in 15s
- Log start from 2024-07-14 00:00:01 to 2024-07-20 23:59:29
-
Overview
Global Stats
- 291 Number of unique normalized queries
- 4,744 Number of queries
- 22h37m35s Total query duration
- 2024-07-14 00:16:18 First query
- 2024-07-20 23:59:29 Last query
- 5 queries/s at 2024-07-16 06:14:01 Query peak
- 22h37m35s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 22h37m35s Execute total duration
- 50 Number of events
- 6 Number of unique normalized events
- 22 Max number of times the same event was reported
- 0 Number of cancellation
- 23 Total number of automatic vacuums
- 125 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 13,898 Total number of sessions
- 50 sessions at 2024-07-17 20:37:53 Session peak
- 280d21h59m Total duration of sessions
- 29m6s Average duration of sessions
- 0 Average queries per session
- 5s860ms Average queries duration per session
- 29m Average idle time per session
- 13,898 Total number of connections
- 21 connections/s at 2024-07-16 09:46:39 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 5 queries/s Query Peak
- 2024-07-16 06:14:01 Date
SELECT Traffic
Key values
- 5 queries/s Query Peak
- 2024-07-16 06:14:01 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 2 queries/s Query Peak
- 2024-07-20 19:00:58 Date
Queries duration
Key values
- 22h37m35s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 14 00 4 0ms 16m16s 4m6s 0ms 1s250ms 16m21s 01 8 0ms 4s73ms 3s622ms 3s959ms 4s10ms 4s73ms 02 8 0ms 5s264ms 2s709ms 3s904ms 5s155ms 5s264ms 03 12 0ms 5s166ms 1s902ms 1s427ms 4s127ms 5s166ms 04 15 0ms 3m36s 16s468ms 2s544ms 3s183ms 3m36s 05 43 0ms 4s665ms 2s427ms 4s665ms 13s797ms 29s149ms 06 22 0ms 33s273ms 6s144ms 4s48ms 13s457ms 57s530ms 07 1 0ms 4s154ms 4s154ms 0ms 0ms 4s154ms 08 5 0ms 1s403ms 1s309ms 0ms 1s61ms 4s110ms 09 4 0ms 4s34ms 2s880ms 1s566ms 4s17ms 4s34ms 10 31 0ms 33s257ms 5s171ms 6s507ms 13s798ms 53s621ms 11 7 0ms 3s940ms 2s460ms 1s348ms 3s890ms 3s940ms 12 3 0ms 1s247ms 1s187ms 0ms 1s184ms 1s247ms 13 4 0ms 4s473ms 2s75ms 1s172ms 1s332ms 4s473ms 14 18 0ms 33s291ms 6s696ms 3s921ms 41s163ms 53s703ms 15 8 0ms 5s83ms 2s127ms 1s286ms 3s964ms 5s83ms 16 5 0ms 3s931ms 2s13ms 1s13ms 2s849ms 3s931ms 17 4 0ms 3m37s 55s440ms 1s176ms 1s335ms 3m37s 18 22 0ms 33s244ms 5s893ms 3s936ms 9s507ms 54s772ms 19 4 0ms 3s196ms 1s923ms 0ms 2s586ms 5s106ms 20 9 0ms 20s830ms 4s549ms 3s270ms 3s799ms 20s830ms 21 10 0ms 2s424ms 1s576ms 2s65ms 4s122ms 4s639ms 22 6 0ms 1s345ms 1s272ms 1s194ms 1s314ms 3s875ms 23 3 0ms 1s178ms 1s172ms 0ms 1s178ms 1s178ms Jul 15 00 5 0ms 16m18s 3m18s 1s349ms 3s691ms 16m23s 01 14 0ms 19s551ms 5s368ms 2s984ms 5s290ms 56s28ms 02 10 0ms 18s993ms 4s725ms 1s431ms 15s281ms 18s993ms 03 4 0ms 3s921ms 2s642ms 1s331ms 3s902ms 3s921ms 04 16 0ms 3m36s 16s30ms 3s952ms 4s79ms 3m43s 05 45 0ms 5s939ms 2s396ms 13s759ms 24s897ms 25s60ms 06 16 0ms 33s209ms 7s584ms 3s916ms 9s578ms 57s783ms 07 7 0ms 6s966ms 2s714ms 1s558ms 2s445ms 6s966ms 08 3 0ms 3s944ms 2s231ms 0ms 1s485ms 3s944ms 09 5 0ms 2m30s 32s282ms 1s261ms 3s902ms 2m30s 10 14 0ms 33s176ms 8s358ms 1s72ms 9s483ms 53s530ms 11 13 0ms 6s943ms 3s226ms 4s105ms 6s931ms 7s202ms 12 4 0ms 3s892ms 1s927ms 0ms 1s196ms 3s892ms 13 8 0ms 5s220ms 3s619ms 3s903ms 3s960ms 8s63ms 14 17 0ms 33s199ms 8s267ms 5s751ms 19s409ms 53s590ms 15 5 0ms 19s600ms 8s586ms 1s167ms 1s349ms 19s600ms 16 21 0ms 4s438ms 3s670ms 8s597ms 12s471ms 17s572ms 17 80 0ms 2h31m44s 3m46s 24s832ms 27s282ms 2h31m56s 18 15 0ms 2h35m19s 10m43s 41s35ms 3m36s 2h35m19s 19 9 0ms 16s237ms 6s403ms 1s364ms 4s415ms 31s161ms 20 6 0ms 3s909ms 1s876ms 1s156ms 1s369ms 3s909ms 21 6 0ms 19s163ms 5s136ms 1s158ms 1s244ms 19s163ms 22 6 0ms 3s968ms 2s443ms 2s291ms 3s946ms 3s968ms 23 24 0ms 42s924ms 4s761ms 7s986ms 9s377ms 42s924ms Jul 16 00 17 0ms 16m18s 1m2s 13s538ms 32s814ms 16m26s 01 6 0ms 8s123ms 4s906ms 1s345ms 8s267ms 15s846ms 02 14 0ms 7s759ms 4s93ms 8s550ms 14s572ms 16s784ms 03 15 0ms 5s94ms 3s385ms 3s965ms 6s833ms 10s125ms 04 12 0ms 8s633ms 3s844ms 5s11ms 6s556ms 8s633ms 05 48 0ms 4s329ms 2s223ms 13s732ms 25s176ms 25s354ms 06 21 0ms 33s156ms 6s312ms 1s355ms 25s625ms 55s38ms 07 13 0ms 5s76ms 2s496ms 3s178ms 4s27ms 5s76ms 08 15 0ms 4s21ms 2s510ms 3s902ms 5s400ms 8s185ms 09 15 0ms 5s277ms 2s240ms 4s276ms 6s396ms 8s530ms 10 34 0ms 33s388ms 4s555ms 9s512ms 41s308ms 53s650ms 11 7 0ms 3s987ms 2s236ms 1s350ms 2s486ms 3s987ms 12 7 0ms 5s267ms 2s976ms 2s332ms 3s970ms 5s267ms 13 6 0ms 5s54ms 3s608ms 1s319ms 4s17ms 5s54ms 14 17 0ms 33s246ms 5s868ms 4s97ms 11s930ms 41s151ms 15 3 0ms 3s950ms 2s562ms 0ms 2s407ms 3s950ms 16 10 0ms 5s555ms 3s214ms 3s993ms 5s304ms 8s254ms 17 3 0ms 3m36s 1m13s 0ms 1s244ms 3m36s 18 18 0ms 42s832ms 9s79ms 9s529ms 42s196ms 53s554ms 19 51 0ms 4s602ms 3s953ms 9s408ms 12s105ms 21s346ms 20 8 0ms 6s819ms 2s748ms 1s697ms 3s968ms 6s819ms 21 7 0ms 3s430ms 2s405ms 1s140ms 1s969ms 11s793ms 22 10 0ms 5s267ms 3s676ms 3s936ms 4s23ms 5s267ms 23 10 0ms 5s236ms 3s75ms 3s963ms 4s239ms 5s576ms Jul 17 00 11 0ms 16m14s 1m30s 1s964ms 3s548ms 16m19s 01 4 0ms 2s40ms 1s659ms 0ms 1s338ms 2s40ms 02 62 0ms 3s965ms 2s273ms 7s858ms 13s566ms 23s137ms 03 48 0ms 5s469ms 2s328ms 5s898ms 9s700ms 24s627ms 04 38 0ms 3m39s 7s794ms 7s735ms 11s549ms 3m39s 05 55 0ms 4s809ms 2s260ms 6s299ms 13s743ms 25s720ms 06 20 0ms 45s859ms 14s671ms 41s226ms 44s590ms 55s287ms 07 41 0ms 57s606ms 10s802ms 45s429ms 57s606ms 1m24s 08 39 0ms 6s81ms 2s376ms 8s189ms 23s365ms 25s674ms 09 6 0ms 1s413ms 1s209ms 1s108ms 1s159ms 1s413ms 10 27 0ms 33s209ms 5s51ms 6s747ms 9s740ms 41s69ms 11 8 0ms 4s47ms 2s279ms 1s201ms 1s470ms 7s823ms 12 7 0ms 4s31ms 2s390ms 1s315ms 3s894ms 4s31ms 13 12 0ms 5s274ms 2s855ms 1s898ms 3s947ms 15s645ms 14 14 0ms 33s216ms 7s84ms 3s873ms 9s455ms 41s84ms 15 7 0ms 4s145ms 2s121ms 1s268ms 2s339ms 4s145ms 16 10 0ms 3s965ms 1s842ms 1s411ms 1s511ms 3s965ms 17 4 0ms 3m37s 56s731ms 0ms 1s392ms 3m38s 18 13 0ms 33s272ms 8s468ms 2s933ms 41s213ms 53s712ms 19 2 0ms 1s345ms 1s250ms 0ms 1s156ms 1s345ms 20 1 0ms 11s229ms 11s229ms 0ms 0ms 11s229ms 21 8 0ms 3s979ms 2s959ms 3s913ms 3s964ms 4s47ms 22 6 0ms 7s60ms 4s272ms 1s347ms 5s137ms 14s64ms 23 3 0ms 4s82ms 3s65ms 0ms 3s933ms 4s82ms Jul 18 00 17 0ms 16m20s 1m 5s171ms 25s129ms 16m25s 01 9 0ms 5s15ms 2s705ms 2s568ms 3s915ms 5s15ms 02 8 0ms 3s939ms 2s32ms 1s544ms 2s345ms 3s939ms 03 7 0ms 4s343ms 2s440ms 1s187ms 4s110ms 4s343ms 04 12 0ms 6s929ms 3s123ms 2s561ms 6s741ms 9s973ms 05 43 0ms 4s371ms 2s156ms 4s421ms 13s777ms 25s209ms 06 13 0ms 33s205ms 8s717ms 1s158ms 9s504ms 53s448ms 07 4 0ms 2s289ms 1s724ms 0ms 1s267ms 2s289ms 08 5 0ms 4s 2s990ms 1s997ms 3s906ms 4s 09 15 0ms 6s434ms 2s537ms 2s306ms 3s894ms 12s592ms 10 18 0ms 33s176ms 7s78ms 4s11ms 13s957ms 53s702ms 11 20 0ms 4s55ms 2s392ms 3s950ms 4s92ms 5s29ms 12 10 0ms 6s521ms 2s888ms 3s910ms 3s932ms 6s521ms 13 31 0ms 6s546ms 1s966ms 4s328ms 7s822ms 15s896ms 14 17 0ms 33s241ms 5s749ms 3s998ms 9s500ms 41s123ms 15 5 0ms 4s150ms 2s400ms 1s241ms 1s367ms 4s150ms 16 2 0ms 3s954ms 3s937ms 0ms 3s919ms 3s954ms 17 4 0ms 3s994ms 2s439ms 0ms 1s547ms 3s994ms 18 12 0ms 33s215ms 8s904ms 1s173ms 9s496ms 53s668ms 19 11 0ms 5s338ms 2s679ms 1s191ms 1s504ms 19s752ms 20 6 0ms 5s321ms 3s296ms 0ms 1s233ms 15s903ms 21 1 0ms 1s414ms 1s414ms 0ms 0ms 1s414ms 22 9 0ms 5s300ms 3s207ms 1s166ms 1s340ms 20s991ms 23 14 0ms 3s910ms 1s585ms 3s333ms 3s910ms 6s371ms Jul 19 00 6 0ms 16m21s 2m47s 3s916ms 6s11ms 16m26s 01 6 0ms 5s157ms 2s437ms 1s597ms 3s922ms 5s157ms 02 12 0ms 5s284ms 3s377ms 4s7ms 5s175ms 10s552ms 03 23 0ms 10s424ms 4s5ms 2s340ms 20s368ms 30s491ms 04 15 0ms 5s169ms 2s134ms 3s924ms 5s169ms 5s209ms 05 48 0ms 5s111ms 2s202ms 5s371ms 13s767ms 25s122ms 06 18 0ms 33s222ms 7s196ms 4s38ms 9s514ms 53s628ms 07 11 0ms 5s109ms 2s71ms 1s258ms 3s972ms 6s793ms 08 7 0ms 5s514ms 2s644ms 1s227ms 4s8ms 5s514ms 09 7 0ms 3s917ms 1s653ms 1s244ms 1s393ms 3s917ms 10 17 0ms 33s217ms 7s712ms 4s98ms 16s356ms 53s606ms 11 10 0ms 1m37s 11s340ms 1s248ms 3s956ms 1m37s 12 1 0ms 1s138ms 1s138ms 0ms 0ms 1s138ms 13 19 0ms 2m27s 10s534ms 5s178ms 10s471ms 2m27s 14 13 0ms 33s208ms 8s716ms 3s975ms 41s93ms 53s462ms 15 5 0ms 5s299ms 3s122ms 1s135ms 3s936ms 5s299ms 16 5 0ms 5s502ms 2s850ms 1s156ms 1s273ms 5s502ms 17 9 0ms 5s187ms 2s96ms 1s296ms 5s121ms 5s187ms 18 12 0ms 33s245ms 8s911ms 1s346ms 41s129ms 53s685ms 19 3 0ms 2s262ms 1s557ms 0ms 1s270ms 2s262ms 20 3 0ms 1s292ms 1s203ms 0ms 1s165ms 1s292ms 21 18 0ms 5s966ms 2s192ms 4s584ms 7s501ms 10s891ms 22 4 0ms 3s908ms 2s92ms 1s170ms 1s901ms 3s908ms 23 20 0ms 4s176ms 1s565ms 1s656ms 2s782ms 9s568ms Jul 20 00 39 0ms 16m23s 27s629ms 5s987ms 12s637ms 16m28s 01 28 0ms 5s202ms 1s858ms 3s984ms 5s20ms 5s202ms 02 49 0ms 6s856ms 2s547ms 6s813ms 8s470ms 13s711ms 03 149 0ms 17m11s 13s14ms 16s828ms 22s977ms 17m11s 04 144 0ms 18m15s 18s88ms 17s956ms 1m15s 18m22s 05 147 0ms 8m7s 9s690ms 21s917ms 24s307ms 8m37s 06 171 0ms 11s104ms 2s499ms 15s737ms 18s408ms 26s405ms 07 134 0ms 17m21s 22s352ms 20s735ms 8m29s 17m28s 08 145 0ms 18s940ms 2s864ms 15s883ms 23s260ms 26s792ms 09 131 0ms 8m27s 7s124ms 17s743ms 24s126ms 8m38s 10 164 0ms 17m16s 15s913ms 18s937ms 24s695ms 17m21s 11 139 1s 17m12s 15s561ms 16s366ms 4m26s 17m14s 12 86 0ms 32s166ms 3s17ms 10s144ms 13s11ms 33s874ms 13 75 0ms 15s299ms 3s42ms 9s718ms 12s963ms 16s951ms 14 114 0ms 17m7s 19s359ms 17s995ms 19s456ms 22m31s 15 105 0ms 9m3s 13s107ms 15s940ms 3m55s 9m18s 16 127 0ms 17m34s 31s73ms 24s605ms 17m22s 17m42s 17 189 0ms 49s866ms 3s115ms 26s853ms 36s460ms 49s866ms 18 156 0ms 17m10s 14s769ms 1m3s 1m33s 17m26s 19 123 0ms 23m23s 40s356ms 2m2s 7m5s 24m12s 20 97 0ms 18m46s 32s552ms 11s238ms 8m32s 18m48s 21 123 0ms 3m16s 4s418ms 13s314ms 24s872ms 3m25s 22 84 0ms 18m15s 27s237ms 16s505ms 7m8s 18m21s 23 18 0ms 18s742ms 4s178ms 5s181ms 6s275ms 18s742ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 14 00 3 0 5m26s 0ms 0ms 16m16s 01 8 0 3s622ms 1s135ms 3s959ms 4s73ms 02 8 0 2s709ms 0ms 3s904ms 5s264ms 03 12 0 1s902ms 1s107ms 1s427ms 5s166ms 04 15 0 16s468ms 1s173ms 2s544ms 3m36s 05 39 0 2s454ms 0ms 4s665ms 29s149ms 06 12 10 6s144ms 2s523ms 4s48ms 53s605ms 07 1 0 4s154ms 0ms 0ms 4s154ms 08 5 0 1s309ms 0ms 0ms 4s110ms 09 3 0 3s205ms 0ms 0ms 4s34ms 10 21 10 5s171ms 3s991ms 6s507ms 53s621ms 11 7 0 2s460ms 0ms 1s348ms 3s940ms 12 3 0 1s187ms 0ms 0ms 1s247ms 13 4 0 2s75ms 0ms 1s172ms 4s473ms 14 8 10 6s696ms 1s331ms 3s921ms 53s703ms 15 8 0 2s127ms 1s124ms 1s286ms 5s83ms 16 5 0 2s13ms 0ms 1s13ms 3s931ms 17 4 0 55s440ms 0ms 1s176ms 3m37s 18 12 10 5s893ms 1s349ms 3s936ms 53s657ms 19 3 0 1s499ms 0ms 0ms 2s586ms 20 6 0 5s195ms 0ms 1s704ms 20s830ms 21 10 0 1s576ms 0ms 2s65ms 4s639ms 22 6 0 1s272ms 0ms 1s194ms 3s875ms 23 3 0 1s172ms 0ms 0ms 1s178ms Jul 15 00 4 0 4m6s 0ms 1s349ms 16m18s 01 14 0 5s368ms 1s479ms 2s984ms 56s28ms 02 10 0 4s725ms 0ms 1s431ms 18s993ms 03 4 0 2s642ms 0ms 1s331ms 3s921ms 04 16 0 16s30ms 1s175ms 3s952ms 3m43s 05 41 0 2s417ms 1s601ms 13s759ms 25s60ms 06 6 10 7s584ms 0ms 3s916ms 53s876ms 07 7 0 2s714ms 0ms 1s558ms 6s966ms 08 3 0 2s231ms 0ms 0ms 3s944ms 09 5 0 32s282ms 0ms 1s261ms 2m30s 10 4 10 8s358ms 0ms 1s72ms 41s81ms 11 13 0 3s226ms 1s196ms 4s105ms 7s202ms 12 4 0 1s927ms 0ms 0ms 3s892ms 13 8 0 3s619ms 0ms 3s903ms 8s63ms 14 7 10 8s267ms 1s144ms 5s751ms 53s590ms 15 5 0 8s586ms 0ms 1s167ms 19s600ms 16 21 0 3s670ms 4s105ms 8s597ms 17s572ms 17 80 0 3m46s 12s210ms 24s832ms 2h31m56s 18 4 10 11m28s 0ms 41s35ms 2h35m19s 19 9 0 6s403ms 0ms 1s364ms 31s161ms 20 6 0 1s876ms 0ms 1s156ms 3s909ms 21 6 0 5s136ms 0ms 1s158ms 19s163ms 22 6 0 2s443ms 0ms 2s291ms 3s968ms 23 24 0 4s761ms 2s87ms 7s986ms 42s924ms Jul 16 00 16 0 1m6s 1s150ms 13s538ms 16m21s 01 6 0 4s906ms 0ms 1s345ms 15s846ms 02 14 0 4s93ms 0ms 8s550ms 16s784ms 03 15 0 3s385ms 1s345ms 3s965ms 10s125ms 04 12 0 3s844ms 3s905ms 5s11ms 8s633ms 05 44 0 2s226ms 2s90ms 13s732ms 25s354ms 06 11 10 6s312ms 0ms 1s355ms 53s759ms 07 13 0 2s496ms 1s129ms 3s178ms 5s63ms 08 15 0 2s510ms 1s159ms 3s902ms 8s185ms 09 15 0 2s240ms 1s421ms 4s276ms 8s530ms 10 24 10 4s555ms 3s948ms 9s512ms 53s650ms 11 7 0 2s236ms 0ms 1s350ms 3s987ms 12 7 0 2s976ms 0ms 2s332ms 5s267ms 13 5 0 3s681ms 0ms 0ms 4s98ms 14 10 7 5s868ms 1s274ms 4s97ms 41s151ms 15 3 0 2s562ms 0ms 0ms 3s950ms 16 10 0 3s214ms 1s109ms 3s993ms 8s254ms 17 3 0 1m13s 0ms 0ms 3m36s 18 8 10 9s79ms 1s142ms 9s529ms 53s554ms 19 51 0 3s953ms 8s75ms 9s408ms 21s346ms 20 8 0 2s748ms 0ms 1s697ms 6s819ms 21 7 0 2s405ms 0ms 1s140ms 11s793ms 22 10 0 3s676ms 1s348ms 3s936ms 5s267ms 23 10 0 3s75ms 1s349ms 3s963ms 5s576ms Jul 17 00 10 0 1m39s 0ms 1s964ms 16m14s 01 4 0 1s659ms 0ms 0ms 2s40ms 02 62 0 2s273ms 3s947ms 7s858ms 22s480ms 03 48 0 2s328ms 4s115ms 5s898ms 24s627ms 04 38 0 7s794ms 5s223ms 7s735ms 3m39s 05 51 0 2s267ms 3s929ms 6s299ms 25s720ms 06 10 10 14s671ms 1s157ms 41s226ms 45s859ms 07 39 0 11s239ms 2s505ms 45s429ms 1m24s 08 37 0 2s383ms 3s902ms 7s355ms 25s674ms 09 6 0 1s209ms 0ms 1s108ms 1s413ms 10 20 7 5s51ms 3s902ms 6s747ms 41s69ms 11 8 0 2s279ms 0ms 1s201ms 7s823ms 12 7 0 2s390ms 0ms 1s315ms 4s31ms 13 11 0 2s942ms 0ms 1s360ms 15s645ms 14 6 8 7s84ms 0ms 3s873ms 41s84ms 15 7 0 2s121ms 0ms 1s268ms 4s145ms 16 10 0 1s842ms 1s150ms 1s411ms 3s965ms 17 4 0 56s731ms 0ms 0ms 3m38s 18 3 10 8s468ms 0ms 2s933ms 53s712ms 19 2 0 1s250ms 0ms 0ms 1s345ms 20 1 0 11s229ms 0ms 0ms 11s229ms 21 8 0 2s959ms 0ms 3s913ms 4s47ms 22 6 0 4s272ms 0ms 1s347ms 14s64ms 23 3 0 3s65ms 0ms 0ms 4s82ms Jul 18 00 16 0 1m4s 1s180ms 5s171ms 16m20s 01 9 0 2s705ms 1s172ms 2s568ms 5s15ms 02 8 0 2s32ms 0ms 1s544ms 3s939ms 03 7 0 2s440ms 0ms 1s187ms 4s343ms 04 12 0 3s123ms 1s157ms 2s561ms 9s973ms 05 39 0 2s152ms 1s15ms 1s398ms 25s209ms 06 3 10 8s717ms 0ms 1s158ms 41s72ms 07 4 0 1s724ms 0ms 0ms 2s289ms 08 5 0 2s990ms 0ms 1s997ms 4s 09 15 0 2s537ms 1s177ms 2s306ms 5s204ms 10 8 10 7s78ms 1s344ms 4s427ms 53s702ms 11 20 0 2s392ms 3s885ms 3s950ms 5s29ms 12 10 0 2s888ms 1s165ms 3s910ms 6s521ms 13 31 0 1s966ms 1s167ms 4s328ms 15s896ms 14 9 8 5s749ms 1s208ms 3s998ms 41s123ms 15 5 0 2s400ms 0ms 1s241ms 4s150ms 16 2 0 3s937ms 0ms 0ms 3s954ms 17 4 0 2s439ms 0ms 0ms 3s994ms 18 2 10 8s904ms 0ms 1s173ms 53s668ms 19 11 0 2s679ms 0ms 1s191ms 19s752ms 20 6 0 3s296ms 0ms 0ms 15s903ms 21 1 0 1s414ms 0ms 0ms 1s414ms 22 9 0 3s207ms 0ms 1s166ms 20s991ms 23 14 0 1s585ms 0ms 3s333ms 6s371ms Jul 19 00 5 0 3m19s 0ms 3s916ms 16m21s 01 6 0 2s437ms 0ms 1s597ms 5s157ms 02 12 0 3s377ms 1s97ms 4s7ms 10s552ms 03 22 0 4s104ms 0ms 2s340ms 30s491ms 04 15 0 2s134ms 1s183ms 3s924ms 5s209ms 05 44 0 2s204ms 1s258ms 5s371ms 25s122ms 06 8 10 7s196ms 1s270ms 4s38ms 41s113ms 07 11 0 2s71ms 0ms 1s258ms 6s793ms 08 7 0 2s644ms 0ms 1s227ms 5s514ms 09 7 0 1s653ms 0ms 1s244ms 3s917ms 10 7 10 7s712ms 0ms 4s98ms 53s606ms 11 10 0 11s340ms 1s91ms 1s248ms 1m37s 12 1 0 1s138ms 0ms 0ms 1s138ms 13 19 0 10s534ms 1s271ms 5s178ms 2m27s 14 3 10 8s716ms 0ms 3s975ms 53s462ms 15 5 0 3s122ms 0ms 1s135ms 5s299ms 16 5 0 2s850ms 0ms 1s156ms 5s502ms 17 9 0 2s96ms 1s148ms 1s296ms 5s187ms 18 2 10 8s911ms 0ms 1s346ms 53s685ms 19 3 0 1s557ms 0ms 0ms 2s262ms 20 3 0 1s203ms 0ms 0ms 1s292ms 21 18 0 2s192ms 1s170ms 4s584ms 10s891ms 22 3 0 2s156ms 0ms 0ms 3s908ms 23 20 0 1s565ms 1s238ms 1s656ms 9s568ms Jul 20 00 37 0 28s900ms 2s769ms 5s987ms 16m23s 01 27 0 1s808ms 1s502ms 3s611ms 5s202ms 02 48 0 2s534ms 5s5ms 6s483ms 13s711ms 03 143 0 13s423ms 13s381ms 16s719ms 8m28s 04 140 0 18s512ms 10s193ms 17s956ms 17m11s 05 139 0 10s95ms 13s226ms 20s370ms 8m21s 06 167 0 2s481ms 12s37ms 15s57ms 19s796ms 07 128 0 23s253ms 16s356ms 20s735ms 17m22s 08 143 0 2s859ms 12s455ms 15s883ms 25s230ms 09 129 0 7s185ms 12s63ms 17s743ms 29s278ms 10 163 0 15s991ms 15s54ms 18s937ms 17m18s 11 132 0 16s241ms 10s883ms 16s366ms 8m31s 12 86 0 3s17ms 6s999ms 10s144ms 14s777ms 13 75 0 3s42ms 8s351ms 9s718ms 15s329ms 14 114 0 19s359ms 10s607ms 17s995ms 8m32s 15 100 0 13s646ms 9s546ms 12s583ms 4m53s 16 126 0 31s294ms 15s27ms 24s605ms 17m35s 17 184 0 3s112ms 15s982ms 26s275ms 42s887ms 18 128 25 14s995ms 18s247ms 53s450ms 8m43s 19 75 46 40s967ms 58s72ms 1m55s 23m25s 20 96 0 32s856ms 8s158ms 11s238ms 17m13s 21 120 0 4s454ms 10s857ms 13s314ms 36s65ms 22 84 0 27s237ms 14s712ms 16s505ms 18m21s 23 18 0 4s178ms 2s910ms 5s181ms 18s742ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 14 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 15 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 16 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 17 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 18 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 19 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 20 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jul 14 00 0 2 2.00 0.00% 01 0 8 8.00 0.00% 02 0 8 8.00 0.00% 03 0 12 12.00 0.00% 04 0 15 15.00 0.00% 05 0 43 43.00 0.00% 06 0 12 12.00 0.00% 07 0 1 1.00 0.00% 08 0 5 5.00 0.00% 09 0 4 4.00 0.00% 10 0 21 21.00 0.00% 11 0 7 7.00 0.00% 12 0 3 3.00 0.00% 13 0 4 4.00 0.00% 14 0 8 8.00 0.00% 15 0 8 8.00 0.00% 16 0 5 5.00 0.00% 17 0 4 4.00 0.00% 18 0 12 12.00 0.00% 19 0 4 4.00 0.00% 20 0 9 9.00 0.00% 21 0 10 10.00 0.00% 22 0 6 6.00 0.00% 23 0 3 3.00 0.00% Jul 15 00 0 3 3.00 0.00% 01 0 14 14.00 0.00% 02 0 10 10.00 0.00% 03 0 4 4.00 0.00% 04 0 16 16.00 0.00% 05 0 45 45.00 0.00% 06 0 9 9.00 0.00% 07 0 7 7.00 0.00% 08 0 3 3.00 0.00% 09 0 5 5.00 0.00% 10 0 4 4.00 0.00% 11 0 15 15.00 0.00% 12 0 4 4.00 0.00% 13 0 8 8.00 0.00% 14 0 7 7.00 0.00% 15 0 5 5.00 0.00% 16 0 21 21.00 0.00% 17 0 80 80.00 0.00% 18 0 5 5.00 0.00% 19 0 9 9.00 0.00% 20 0 6 6.00 0.00% 21 0 6 6.00 0.00% 22 0 6 6.00 0.00% 23 0 24 24.00 0.00% Jul 16 00 0 15 15.00 0.00% 01 0 6 6.00 0.00% 02 0 14 14.00 0.00% 03 0 15 15.00 0.00% 04 0 12 12.00 0.00% 05 0 48 48.00 0.00% 06 0 11 11.00 0.00% 07 0 15 15.00 0.00% 08 0 15 15.00 0.00% 09 0 15 15.00 0.00% 10 0 25 25.00 0.00% 11 0 7 7.00 0.00% 12 0 7 7.00 0.00% 13 0 8 8.00 0.00% 14 0 10 10.00 0.00% 15 0 3 3.00 0.00% 16 0 11 11.00 0.00% 17 0 3 3.00 0.00% 18 0 8 8.00 0.00% 19 0 51 51.00 0.00% 20 0 8 8.00 0.00% 21 0 7 7.00 0.00% 22 0 10 10.00 0.00% 23 0 10 10.00 0.00% Jul 17 00 0 9 9.00 0.00% 01 0 4 4.00 0.00% 02 0 62 62.00 0.00% 03 0 48 48.00 0.00% 04 0 38 38.00 0.00% 05 0 55 55.00 0.00% 06 0 11 11.00 0.00% 07 0 44 44.00 0.00% 08 0 39 39.00 0.00% 09 0 9 9.00 0.00% 10 0 21 21.00 0.00% 11 0 8 8.00 0.00% 12 0 8 8.00 0.00% 13 0 13 13.00 0.00% 14 0 8 8.00 0.00% 15 0 8 8.00 0.00% 16 0 11 11.00 0.00% 17 0 5 5.00 0.00% 18 0 3 3.00 0.00% 19 0 2 2.00 0.00% 20 0 1 1.00 0.00% 21 0 8 8.00 0.00% 22 0 6 6.00 0.00% 23 0 3 3.00 0.00% Jul 18 00 0 15 15.00 0.00% 01 0 9 9.00 0.00% 02 0 8 8.00 0.00% 03 0 7 7.00 0.00% 04 0 12 12.00 0.00% 05 0 43 43.00 0.00% 06 0 3 3.00 0.00% 07 0 5 5.00 0.00% 08 0 5 5.00 0.00% 09 0 18 18.00 0.00% 10 0 8 8.00 0.00% 11 0 20 20.00 0.00% 12 0 10 10.00 0.00% 13 0 31 31.00 0.00% 14 0 9 9.00 0.00% 15 0 6 6.00 0.00% 16 0 2 2.00 0.00% 17 0 4 4.00 0.00% 18 0 2 2.00 0.00% 19 0 11 11.00 0.00% 20 0 6 6.00 0.00% 21 0 1 1.00 0.00% 22 0 9 9.00 0.00% 23 0 14 14.00 0.00% Jul 19 00 0 4 4.00 0.00% 01 0 6 6.00 0.00% 02 0 12 12.00 0.00% 03 0 23 23.00 0.00% 04 0 15 15.00 0.00% 05 0 48 48.00 0.00% 06 0 8 8.00 0.00% 07 0 11 11.00 0.00% 08 0 7 7.00 0.00% 09 0 7 7.00 0.00% 10 0 7 7.00 0.00% 11 0 10 10.00 0.00% 12 0 1 1.00 0.00% 13 0 19 19.00 0.00% 14 0 4 4.00 0.00% 15 0 6 6.00 0.00% 16 0 5 5.00 0.00% 17 0 10 10.00 0.00% 18 0 2 2.00 0.00% 19 0 3 3.00 0.00% 20 0 3 3.00 0.00% 21 0 18 18.00 0.00% 22 0 4 4.00 0.00% 23 0 20 20.00 0.00% Jul 20 00 0 37 37.00 0.00% 01 0 28 28.00 0.00% 02 0 49 49.00 0.00% 03 0 149 149.00 0.00% 04 0 144 144.00 0.00% 05 0 147 147.00 0.00% 06 0 171 171.00 0.00% 07 0 134 134.00 0.00% 08 0 145 145.00 0.00% 09 0 131 131.00 0.00% 10 0 164 164.00 0.00% 11 0 139 139.00 0.00% 12 0 86 86.00 0.00% 13 0 75 75.00 0.00% 14 0 114 114.00 0.00% 15 0 105 105.00 0.00% 16 0 127 127.00 0.00% 17 0 189 189.00 0.00% 18 0 131 131.00 0.00% 19 0 77 77.00 0.00% 20 0 97 97.00 0.00% 21 0 123 123.00 0.00% 22 0 84 84.00 0.00% 23 0 18 18.00 0.00% Day Hour Count Average / Second Jul 14 00 77 0.02/s 01 81 0.02/s 02 79 0.02/s 03 82 0.02/s 04 87 0.02/s 05 93 0.03/s 06 79 0.02/s 07 73 0.02/s 08 81 0.02/s 09 81 0.02/s 10 81 0.02/s 11 72 0.02/s 12 73 0.02/s 13 79 0.02/s 14 78 0.02/s 15 79 0.02/s 16 76 0.02/s 17 76 0.02/s 18 81 0.02/s 19 78 0.02/s 20 94 0.03/s 21 76 0.02/s 22 77 0.02/s 23 77 0.02/s Jul 15 00 77 0.02/s 01 81 0.02/s 02 78 0.02/s 03 79 0.02/s 04 79 0.02/s 05 94 0.03/s 06 79 0.02/s 07 73 0.02/s 08 78 0.02/s 09 80 0.02/s 10 78 0.02/s 11 71 0.02/s 12 76 0.02/s 13 82 0.02/s 14 84 0.02/s 15 77 0.02/s 16 77 0.02/s 17 85 0.02/s 18 80 0.02/s 19 74 0.02/s 20 79 0.02/s 21 76 0.02/s 22 79 0.02/s 23 80 0.02/s Jul 16 00 86 0.02/s 01 82 0.02/s 02 83 0.02/s 03 78 0.02/s 04 83 0.02/s 05 94 0.03/s 06 76 0.02/s 07 83 0.02/s 08 101 0.03/s 09 137 0.04/s 10 74 0.02/s 11 82 0.02/s 12 78 0.02/s 13 74 0.02/s 14 77 0.02/s 15 75 0.02/s 16 78 0.02/s 17 81 0.02/s 18 78 0.02/s 19 80 0.02/s 20 78 0.02/s 21 69 0.02/s 22 84 0.02/s 23 79 0.02/s Jul 17 00 81 0.02/s 01 80 0.02/s 02 82 0.02/s 03 80 0.02/s 04 85 0.02/s 05 97 0.03/s 06 101 0.03/s 07 110 0.03/s 08 97 0.03/s 09 75 0.02/s 10 81 0.02/s 11 76 0.02/s 12 73 0.02/s 13 79 0.02/s 14 80 0.02/s 15 74 0.02/s 16 75 0.02/s 17 74 0.02/s 18 77 0.02/s 19 75 0.02/s 20 74 0.02/s 21 72 0.02/s 22 77 0.02/s 23 82 0.02/s Jul 18 00 75 0.02/s 01 74 0.02/s 02 80 0.02/s 03 78 0.02/s 04 78 0.02/s 05 90 0.03/s 06 74 0.02/s 07 74 0.02/s 08 73 0.02/s 09 79 0.02/s 10 79 0.02/s 11 81 0.02/s 12 77 0.02/s 13 79 0.02/s 14 81 0.02/s 15 76 0.02/s 16 76 0.02/s 17 80 0.02/s 18 77 0.02/s 19 78 0.02/s 20 73 0.02/s 21 72 0.02/s 22 82 0.02/s 23 77 0.02/s Jul 19 00 84 0.02/s 01 82 0.02/s 02 80 0.02/s 03 83 0.02/s 04 76 0.02/s 05 94 0.03/s 06 77 0.02/s 07 74 0.02/s 08 81 0.02/s 09 81 0.02/s 10 75 0.02/s 11 75 0.02/s 12 76 0.02/s 13 79 0.02/s 14 80 0.02/s 15 72 0.02/s 16 79 0.02/s 17 78 0.02/s 18 80 0.02/s 19 77 0.02/s 20 75 0.02/s 21 74 0.02/s 22 81 0.02/s 23 76 0.02/s Jul 20 00 81 0.02/s 01 83 0.02/s 02 92 0.03/s 03 98 0.03/s 04 112 0.03/s 05 106 0.03/s 06 105 0.03/s 07 99 0.03/s 08 100 0.03/s 09 112 0.03/s 10 116 0.03/s 11 101 0.03/s 12 96 0.03/s 13 88 0.02/s 14 97 0.03/s 15 109 0.03/s 16 149 0.04/s 17 96 0.03/s 18 98 0.03/s 19 89 0.02/s 20 95 0.03/s 21 98 0.03/s 22 91 0.03/s 23 82 0.02/s Day Hour Count Average Duration Average idle time Jul 14 00 77 31m12s 30m59s 01 81 30m19s 30m18s 02 79 30m50s 30m50s 03 82 30m12s 30m12s 04 87 27m51s 27m48s 05 93 24m55s 24m54s 06 79 31m14s 31m12s 07 73 31m23s 31m23s 08 81 30m51s 30m51s 09 81 30m30s 30m30s 10 81 29m9s 29m7s 11 72 32m11s 32m11s 12 73 31m31s 31m31s 13 79 30m58s 30m58s 14 78 30m41s 30m39s 15 79 30m41s 30m40s 16 76 31m45s 31m45s 17 76 31m32s 31m29s 18 81 29m31s 29m29s 19 78 30m48s 30m48s 20 94 25m24s 25m23s 21 76 29m49s 29m49s 22 77 30m35s 30m35s 23 77 31m36s 31m36s Jul 15 00 77 31m20s 31m7s 01 81 30m29s 30m28s 02 78 31m8s 31m7s 03 79 31m7s 31m7s 04 79 30m50s 30m47s 05 94 25m43s 25m42s 06 79 30m18s 30m17s 07 73 32m18s 32m18s 08 78 31m33s 31m33s 09 80 30m47s 30m45s 10 78 30m1s 30m 11 71 32m38s 32m37s 12 76 31m15s 31m15s 13 82 29m30s 29m30s 14 83 30m11s 30m9s 15 75 31m36s 31m35s 16 77 30m59s 30m58s 17 87 30m28s 26m59s 18 81 32m4s 30m5s 19 74 30m52s 30m52s 20 79 31m32s 31m32s 21 76 29m29s 29m28s 22 79 29m54s 29m54s 23 80 30m30s 30m28s Jul 16 00 86 29m12s 28m59s 01 82 29m21s 29m21s 02 83 30m50s 30m49s 03 78 30m10s 30m9s 04 83 29m36s 29m35s 05 94 25m6s 25m5s 06 76 30m54s 30m52s 07 83 29m41s 29m40s 08 101 24m11s 24m11s 09 137 17m19s 17m19s 10 74 29m28s 29m26s 11 82 30m33s 30m33s 12 78 31m21s 31m21s 13 74 31m50s 31m50s 14 77 30m44s 30m43s 15 75 32m3s 32m3s 16 78 32m38s 32m37s 17 81 29m18s 29m15s 18 78 30m39s 30m37s 19 80 29m32s 29m30s 20 78 30m53s 30m53s 21 69 31m34s 31m34s 22 84 29m9s 29m8s 23 79 30m17s 30m17s Jul 17 00 81 30m20s 30m8s 01 80 30m48s 30m47s 02 82 29m37s 29m35s 03 80 29m34s 29m32s 04 85 28m15s 28m11s 05 97 25m17s 25m16s 06 101 24m55s 24m53s 07 108 23m6s 23m2s 08 99 22m47s 22m46s 09 75 30m 30m 10 81 28m57s 28m55s 11 76 33m10s 33m10s 12 73 31m59s 31m59s 13 79 30m41s 30m41s 14 80 31m23s 31m22s 15 74 32m29s 32m29s 16 75 31m41s 31m41s 17 74 31m40s 31m37s 18 77 32m53s 32m51s 19 75 32m32s 32m32s 20 74 31m34s 31m33s 21 72 31m6s 31m6s 22 77 32m11s 32m11s 23 82 30m52s 30m51s Jul 18 00 75 31m3s 30m49s 01 74 31m15s 31m15s 02 80 31m50s 31m50s 03 78 31m5s 31m5s 04 78 30m25s 30m25s 05 90 26m37s 26m36s 06 74 31m4s 31m2s 07 74 31m51s 31m51s 08 73 31m36s 31m36s 09 79 30m49s 30m48s 10 79 31m19s 31m18s 11 81 30m15s 30m14s 12 77 31m19s 31m18s 13 79 30m 30m 14 81 30m4s 30m2s 15 76 32m5s 32m5s 16 76 31m40s 31m40s 17 80 30m4s 30m4s 18 77 30m58s 30m57s 19 78 30m25s 30m25s 20 73 31m55s 31m55s 21 72 32m39s 32m39s 22 82 30m2s 30m2s 23 77 30m44s 30m44s Jul 19 00 84 29m34s 29m22s 01 82 30m2s 30m2s 02 80 30m24s 30m23s 03 83 29m25s 29m24s 04 76 31m19s 31m18s 05 94 25m39s 25m38s 06 77 29m47s 29m45s 07 74 31m49s 31m49s 08 81 30m21s 30m21s 09 81 29m6s 29m6s 10 75 31m22s 31m21s 11 75 32m49s 32m47s 12 76 32m2s 32m2s 13 79 30m5s 30m2s 14 80 30m54s 30m52s 15 72 31m31s 31m31s 16 79 30m24s 30m24s 17 78 31m27s 31m27s 18 80 30m18s 30m16s 19 77 31m7s 31m7s 20 75 32m6s 32m6s 21 74 30m46s 30m45s 22 81 29m59s 29m59s 23 76 31m51s 31m51s Jul 20 00 81 30m5s 29m52s 01 83 30m12s 30m12s 02 91 26m41s 26m40s 03 99 25m4s 24m45s 04 112 22m26s 22m3s 05 106 19m59s 19m46s 06 104 22m24s 22m20s 07 100 24m27s 23m57s 08 100 24m17s 24m13s 09 111 22m13s 22m4s 10 115 21m26s 21m3s 11 103 23m38s 23m17s 12 96 25m16s 25m14s 13 88 27m15s 27m12s 14 97 24m32s 24m10s 15 109 23m20s 23m7s 16 149 15m56s 15m30s 17 96 25m4s 24m57s 18 97 25m52s 25m28s 19 89 27m26s 26m30s 20 96 26m23s 25m50s 21 97 22m46s 22m40s 22 92 26m51s 26m27s 23 82 29m51s 29m50s -
Connections
Established Connections
Key values
- 21 connections Connection Peak
- 2024-07-16 09:46:39 Date
Connections per database
Key values
- ctdprd51 Main Database
- 13,898 connections Total
Connections per user
Key values
- pubeu Main User
- 13,898 connections Total
-
Sessions
Simultaneous sessions
Key values
- 50 sessions Session Peak
- 2024-07-17 20:37:53 Date
Histogram of session times
Key values
- 12,270 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 13,898 sessions Total
Sessions per user
Key values
- pubeu Main User
- 13,898 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 13,898 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 219,885 buffers Checkpoint Peak
- 2024-07-17 13:04:46 Date
- 1620.009 seconds Highest write time
- 0.007 seconds Sync time
Checkpoints Wal files
Key values
- 57 files Wal files usage Peak
- 2024-07-14 19:34:37 Date
Checkpoints distance
Key values
- 1,827.43 Mo Distance Peak
- 2024-07-14 19:34:37 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jul 14 00 504 50.702s 0.003s 50.773s 01 139 14.109s 0.003s 14.141s 02 157 15.915s 0.002s 15.945s 03 147 14.91s 0.002s 14.941s 04 117 11.901s 0.002s 11.931s 05 62 6.408s 0.002s 6.438s 06 1,232 123.514s 0.003s 123.595s 07 961 96.471s 0.003s 96.5s 08 5,776 578.849s 0.004s 578.93s 09 447 44.971s 0.003s 45.002s 10 234 23.639s 0.002s 23.67s 11 1,267 127.127s 0.003s 127.158s 12 163 16.52s 0.002s 16.552s 13 61 6.283s 0.002s 6.316s 14 75 7.688s 0.002s 7.719s 15 442 44.45s 0.002s 44.526s 16 795 79.875s 0.003s 79.905s 17 69 7.093s 0.002s 7.123s 18 89 9.101s 0.002s 9.13s 19 218,039 1,631.855s 0.003s 1,632.589s 20 823 82.644s 0.003s 82.675s 21 145 14.711s 0.002s 14.742s 22 160 16.209s 0.002s 16.24s 23 87 8.889s 0.002s 8.92s Jul 15 00 512 51.485s 0.003s 51.556s 01 4,441 444.967s 0.003s 445.068s 02 89 9.099s 0.002s 9.13s 03 1,067 106.997s 0.002s 107.029s 04 2,594 260.064s 0.004s 260.143s 05 1,880 188.546s 0.003s 188.625s 06 567 56.998s 0.003s 57.028s 07 59,536 1,639.916s 0.003s 1,640.455s 08 262 26.431s 0.002s 26.461s 09 139 14.112s 0.002s 14.141s 10 967 97.08s 0.003s 97.111s 11 7,193 720.609s 0.003s 720.725s 12 239 24.026s 0.002s 24.056s 13 144 14.599s 0.002s 14.627s 14 208 21.019s 0.002s 21.05s 15 186 18.826s 0.002s 18.87s 16 342 34.463s 0.002s 34.495s 17 233 23.69s 0.002s 23.723s 18 95 9.7s 0.002s 9.732s 19 92 9.393s 0.002s 9.425s 20 159 16.102s 0.002s 16.182s 21 81 8.285s 0.002s 8.315s 22 89 9.101s 0.002s 9.131s 23 155 15.71s 0.002s 15.741s Jul 16 00 609 61.221s 0.003s 61.292s 01 5,462 547.15s 0.003s 547.219s 02 30 3.096s 0.001s 3.111s 03 102,675 4,217.473s 0.006s 4,218.437s 04 154 15.619s 0.002s 15.649s 05 24 2.496s 0.001s 2.51s 06 53,254 1,647.577s 0.004s 1,648.08s 07 2,585 259.099s 0.004s 259.145s 08 8,807 881.986s 0.003s 882.113s 09 46 4.697s 0.001s 4.712s 10 81,488 1,648.207s 0.004s 1,648.729s 11 279 28.146s 0.002s 28.176s 12 424 42.669s 0.002s 42.699s 13 2,913 291.922s 0.003s 292s 14 1,639 164.403s 0.002s 164.482s 15 221 22.32s 0.002s 22.351s 16 1,994 199.97s 0.002s 200.045s 17 143 14.502s 0.002s 14.532s 18 201 20.314s 0.002s 20.344s 19 244 24.627s 0.003s 24.658s 20 4,664 467.336s 0.003s 467.437s 21 330 33.254s 0.002s 33.284s 22 78 7.993s 0.002s 8.023s 23 142 14.407s 0.002s 14.437s Jul 17 00 567 57.012s 0.003s 57.085s 01 4,777 478.682s 0.003s 478.782s 02 221 22.321s 0.002s 22.351s 03 628 63.1s 0.002s 63.132s 04 1,527 152.977s 0.003s 153.053s 05 3,344 335.169s 0.003s 335.247s 06 4,269 427.951s 0.003s 428.044s 07 464 46.688s 0.002s 46.719s 08 93 9.42s 0.001s 9.485s 09 57,414 1,851.254s 0.006s 1,851.764s 10 610 61.311s 0.002s 61.391s 11 59,251 1,636.796s 0.003s 1,637.324s 12 4,795 480.203s 0.002s 480.291s 13 220,170 1,648.484s 0.004s 1,648.968s 14 296 29.853s 0.002s 29.884s 15 318 32.051s 0.002s 32.082s 16 1,804 180.842s 0.003s 180.923s 17 385 38.776s 0.002s 38.807s 18 184 18.617s 0.002s 18.647s 19 143 14.501s 0.002s 14.53s 20 97 9.894s 0.002s 9.926s 21 1,238 124.221s 0.008s 124.259s 22 114 11.61s 0.002s 11.642s 23 203 20.528s 0.002s 20.56s Jul 18 00 1,413 141.797s 0.005s 141.879s 01 179 18.112s 0.002s 18.142s 02 5,602 561.014s 0.002s 561.128s 03 7,848 785.945s 0.003s 786.06s 04 192 19.433s 0.002s 19.463s 05 4,659 466.787s 0.002s 466.887s 06 5,027 503.617s 0.003s 503.716s 07 396 39.761s 0.003s 39.793s 08 265 26.742s 0.002s 26.771s 09 258 26.031s 0.002s 26.063s 10 467 47.009s 0.003s 47.041s 11 46 4.703s 0.001s 4.718s 12 52,091 1,639.463s 0.004s 1,639.94s 13 239 24.134s 0.002s 24.21s 14 5,845 585.777s 0.003s 585.881s 15 296 29.847s 0.002s 29.88s 16 370 37.276s 0.002s 37.306s 17 195 19.728s 0.002s 19.76s 18 116 11.801s 0.002s 11.881s 19 172 17.415s 0.002s 17.446s 20 397 39.952s 0.002s 39.982s 21 14,321 1,434.667s 0.003s 1,434.8s 22 200 20.222s 0.002s 20.253s 23 102 10.39s 0.002s 10.421s Jul 19 00 1,474 147.844s 0.004s 147.963s 01 4,627 463.81s 0.004s 463.898s 02 134 13.61s 0.002s 13.641s 03 11,055 1,107.544s 0.004s 1,107.661s 04 159 16.115s 0.002s 16.145s 05 4,543 455.232s 0.002s 455.697s 06 60,190 1,673.831s 0.005s 1,674.008s 07 587 58.998s 0.003s 59.029s 08 742 74.515s 0.003s 74.546s 09 4,587 459.376s 0.003s 459.477s 10 5,745 575.616s 0.003s 575.719s 11 2,460 246.648s 0.003s 246.697s 12 5,520 553.265s 0.004s 553.368s 13 78 7.907s 0.001s 7.922s 14 50,539 1,639.069s 0.004s 1,639.547s 15 1,037 104.094s 0.003s 104.172s 16 250 25.237s 0.002s 25.267s 17 224 22.624s 0.002s 22.655s 18 192 19.418s 0.002s 19.448s 19 175 17.723s 0.002s 17.753s 20 122 12.408s 0.002s 12.438s 21 106 10.791s 0.002s 10.821s 22 115 11.69s 0.002s 11.72s 23 2,000 200.49s 0.003s 200.57s Jul 20 00 12,688 1,270.77s 0.005s 1,270.958s 01 5,816 582.551s 0.003s 582.632s 02 279 28.143s 0.002s 28.173s 03 383 38.565s 0.002s 38.595s 04 1,359 136.389s 0.004s 136.42s 05 723 72.672s 0.002s 72.703s 06 501 50.301s 0.002s 50.337s 07 735 73.86s 0.003s 73.939s 08 361 36.374s 0.002s 36.404s 09 263 26.552s 0.002s 26.582s 10 77 7.814s 0.001s 7.829s 11 15,056 1,507.895s 0.003s 1,508.071s 12 4,852 486.044s 0.003s 486.133s 13 126 12.818s 0.002s 12.849s 14 261 26.347s 0.002s 26.378s 15 1,095 109.815s 0.003s 109.845s 16 732 73.546s 0.002s 73.622s 17 154 15.625s 0.002s 15.655s 18 114 11.614s 0.002s 11.648s 19 97 9.943s 0.002s 9.985s 20 92,181 1,619.44s 0.002s 1,619.455s 21 161 16.33s 0.002s 16.361s 22 167 16.928s 0.002s 16.958s 23 93 9.51s 0.002s 9.541s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jul 14 00 0 0 0 66 0.001s 0.002s 01 0 0 0 27 0.001s 0.002s 02 0 0 0 27 0.001s 0.002s 03 0 0 0 29 0.001s 0.002s 04 0 0 0 30 0.001s 0.002s 05 0 0 0 21 0.001s 0.002s 06 0 0 1 98 0.001s 0.002s 07 0 0 0 123 0.001s 0.002s 08 0 0 4 143 0.001s 0.002s 09 0 0 0 77 0.001s 0.002s 10 0 0 0 50 0.001s 0.002s 11 0 0 0 135 0.001s 0.002s 12 0 0 0 32 0.001s 0.002s 13 0 0 0 19 0.001s 0.002s 14 0 0 0 22 0.001s 0.002s 15 0 0 1 31 0.001s 0.002s 16 0 0 0 45 0.001s 0.002s 17 0 0 0 18 0.001s 0.002s 18 0 0 0 20 0.001s 0.002s 19 0 0 57 57 0.001s 0.002s 20 0 0 0 45 0.001s 0.002s 21 0 0 0 27 0.001s 0.002s 22 0 0 0 32 0.001s 0.002s 23 0 0 0 20 0.001s 0.002s Jul 15 00 0 0 0 74 0.001s 0.002s 01 0 0 3 36 0.001s 0.002s 02 0 0 0 24 0.001s 0.002s 03 0 0 0 39 0.001s 0.002s 04 0 0 1 62 0.001s 0.002s 05 0 0 1 61 0.001s 0.002s 06 0 0 0 89 0.001s 0.002s 07 0 0 40 141 0.001s 0.002s 08 0 0 0 113 0.001s 0.002s 09 0 0 0 26 0.001s 0.002s 10 0 0 0 81 0.001s 0.002s 11 0 0 4 138 0.001s 0.002s 12 0 0 0 108 0.001s 0.002s 13 0 0 0 64 0.001s 0.002s 14 0 0 0 80 0.001s 0.002s 15 0 0 0 34 0.001s 0.002s 16 0 0 0 124 0.001s 0.002s 17 0 0 0 70 0.001s 0.002s 18 0 0 0 28 0.001s 0.002s 19 0 0 0 24 0.001s 0.002s 20 0 0 1 29 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 0 0 29 0.001s 0.002s Jul 16 00 0 0 0 74 0.001s 0.002s 01 0 0 3 38 0.001s 0.002s 02 0 0 0 11 0.001s 0.001s 03 0 0 68 106 0.001s 0.003s 04 0 0 0 31 0.001s 0.002s 05 0 0 0 10 0.001s 0.001s 06 0 0 35 116 0.001s 0.003s 07 0 0 1 140 0.001s 0.002s 08 0 0 5 78 0.001s 0.002s 09 0 0 0 11 0.001s 0.001s 10 0 0 37 188 0.001s 0.003s 11 0 0 0 107 0.001s 0.002s 12 0 0 0 125 0.001s 0.002s 13 0 0 1 131 0.001s 0.002s 14 0 0 1 147 0.001s 0.002s 15 0 0 0 68 0.001s 0.002s 16 0 0 1 93 0.001s 0.002s 17 0 0 0 63 0.001s 0.002s 18 0 0 0 62 0.001s 0.002s 19 0 0 0 76 0.001s 0.002s 20 0 0 3 31 0.001s 0.002s 21 0 0 0 115 0.001s 0.002s 22 0 0 0 19 0.001s 0.002s 23 0 0 0 22 0.001s 0.002s Jul 17 00 0 0 0 72 0.001s 0.002s 01 0 0 3 46 0.001s 0.002s 02 0 0 0 30 0.001s 0.002s 03 0 0 0 46 0.001s 0.002s 04 0 0 1 48 0.001s 0.002s 05 0 0 1 42 0.001s 0.002s 06 0 0 2 140 0.001s 0.002s 07 0 0 0 116 0.001s 0.002s 08 0 0 1 13 0.001s 0.001s 09 0 0 37 190 0.001s 0.003s 10 0 0 1 117 0.001s 0.002s 11 0 0 39 130 0.001s 0.002s 12 0 0 3 87 0.001s 0.001s 13 0 0 34 194 0.001s 0.003s 14 0 0 0 114 0.001s 0.002s 15 0 0 0 116 0.001s 0.002s 16 0 0 1 77 0.001s 0.002s 17 0 0 0 122 0.001s 0.002s 18 0 0 0 36 0.001s 0.002s 19 0 0 0 66 0.001s 0.002s 20 0 0 0 20 0.001s 0.002s 21 0 0 0 30 0.006s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 0 0 29 0.001s 0.002s Jul 18 00 0 0 1 86 0.001s 0.002s 01 0 0 0 34 0.001s 0.002s 02 0 0 4 49 0.001s 0.002s 03 0 0 4 53 0.001s 0.002s 04 0 0 0 34 0.001s 0.002s 05 0 0 3 41 0.001s 0.002s 06 0 0 3 140 0.001s 0.002s 07 0 0 0 126 0.001s 0.002s 08 0 0 0 77 0.001s 0.002s 09 0 0 0 113 0.001s 0.002s 10 0 0 0 130 0.001s 0.002s 11 0 0 0 10 0.001s 0.001s 12 0 0 33 140 0.001s 0.003s 13 0 0 1 114 0.001s 0.002s 14 0 0 3 138 0.001s 0.002s 15 0 0 0 107 0.001s 0.002s 16 0 0 0 110 0.001s 0.002s 17 0 0 0 27 0.001s 0.002s 18 0 0 1 26 0.001s 0.002s 19 0 0 0 26 0.001s 0.002s 20 0 0 0 105 0.001s 0.002s 21 0 0 8 133 0.001s 0.002s 22 0 0 0 29 0.001s 0.002s 23 0 0 0 21 0.001s 0.002s Jul 19 00 0 0 1 81 0.001s 0.002s 01 0 0 2 58 0.001s 0.002s 02 0 0 0 35 0.001s 0.002s 03 0 0 7 63 0.001s 0.002s 04 0 0 0 27 0.001s 0.002s 05 0 0 35 28 0.001s 0.001s 06 0 0 8 139 0.001s 0.003s 07 0 0 0 145 0.001s 0.002s 08 0 0 0 81 0.001s 0.002s 09 0 0 3 34 0.001s 0.002s 10 0 0 3 45 0.001s 0.002s 11 0 0 1 138 0.001s 0.002s 12 0 0 3 141 0.001s 0.002s 13 0 0 0 15 0.001s 0.001s 14 0 0 33 94 0.001s 0.003s 15 0 0 1 122 0.001s 0.002s 16 0 0 0 101 0.001s 0.002s 17 0 0 0 65 0.001s 0.002s 18 0 0 0 59 0.001s 0.002s 19 0 0 0 27 0.001s 0.002s 20 0 0 0 20 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 21 0.001s 0.002s 23 0 0 1 40 0.001s 0.002s Jul 20 00 0 0 7 102 0.001s 0.002s 01 0 0 4 53 0.001s 0.002s 02 0 0 0 36 0.001s 0.002s 03 0 0 0 36 0.001s 0.002s 04 0 0 0 48 0.001s 0.002s 05 0 0 0 41 0.001s 0.002s 06 0 0 0 40 0.001s 0.002s 07 0 0 1 35 0.001s 0.002s 08 0 0 0 40 0.001s 0.002s 09 0 0 0 29 0.001s 0.002s 10 0 0 0 11 0.001s 0.001s 11 0 0 10 40 0.001s 0.002s 12 0 0 2 49 0.001s 0.002s 13 0 0 0 21 0.001s 0.002s 14 0 0 0 31 0.001s 0.002s 15 0 0 0 32 0.001s 0.002s 16 0 0 1 31 0.001s 0.002s 17 0 0 0 21 0.001s 0.002s 18 0 0 0 25 0.001s 0.002s 19 0 0 0 20 0.001s 0.002s 20 0 0 0 16 0.001s 0.001s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 19 0.001s 0.002s 23 0 0 0 19 0.001s 0.002s Day Hour Count Avg time (sec) Jul 14 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 15 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 16 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 17 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 18 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 19 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 20 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jul 14 00 1,495.00 kB 3,035.00 kB 01 181.00 kB 2,550.00 kB 02 215.50 kB 2,104.00 kB 03 225.00 kB 1,760.50 kB 04 226.50 kB 1,470.00 kB 05 83.00 kB 1,204.50 kB 06 3,487.00 kB 3,635.50 kB 07 2,781.50 kB 5,762.50 kB 08 29,497.00 kB 31,505.50 kB 09 1,263.00 kB 49,718.50 kB 10 495.50 kB 40,440.50 kB 11 3,739.00 kB 33,175.00 kB 12 284.00 kB 27,218.00 kB 13 79.50 kB 22,063.00 kB 14 108.00 kB 17,890.50 kB 15 1,621.00 kB 14,660.00 kB 16 2,205.50 kB 12,261.50 kB 17 76.00 kB 10,119.50 kB 18 93.00 kB 8,213.50 kB 19 468,130.50 kB 888,891.50 kB 20 2,232.50 kB 720,391.50 kB 21 309.00 kB 583,633.00 kB 22 374.00 kB 472,813.00 kB 23 123.50 kB 383,002.50 kB Jul 15 00 1,412.50 kB 310,441.00 kB 01 20,353.00 kB 255,376.00 kB 02 179.00 kB 206,887.50 kB 03 3,323.00 kB 167,927.00 kB 04 8,114.00 kB 137,329.50 kB 05 5,363.50 kB 112,475.00 kB 06 1,483.50 kB 91,661.00 kB 07 323,090.00 kB 612,793.00 kB 08 771.00 kB 496,536.00 kB 09 278.00 kB 402,252.00 kB 10 2,748.00 kB 326,326.50 kB 11 32,651.50 kB 267,684.50 kB 12 673.50 kB 219,820.50 kB 13 283.00 kB 178,104.50 kB 14 435.50 kB 144,359.50 kB 15 345.00 kB 116,981.50 kB 16 852.00 kB 94,906.50 kB 17 459.50 kB 76,969.50 kB 18 95.50 kB 62,387.00 kB 19 119.00 kB 50,553.50 kB 20 361.00 kB 40,995.00 kB 21 116.00 kB 33,249.50 kB 22 108.50 kB 26,953.50 kB 23 376.00 kB 21,881.50 kB Jul 16 00 1,767.50 kB 17,997.50 kB 01 28,960.00 kB 54,783.50 kB 02 60.00 kB 46,729.00 kB 03 366,763.00 kB 584,448.67 kB 04 239.00 kB 646,543.50 kB 05 60.00 kB 551,273.00 kB 06 193,337.00 kB 522,835.67 kB 07 8,874.00 kB 401,893.50 kB 08 38,637.50 kB 333,554.50 kB 09 102.00 kB 284,414.00 kB 10 201,397.00 kB 544,581.67 kB 11 547.50 kB 417,656.50 kB 12 981.50 kB 338,477.50 kB 13 11,080.00 kB 275,339.50 kB 14 5,015.50 kB 224,552.00 kB 15 464.50 kB 182,351.50 kB 16 6,953.50 kB 148,480.00 kB 17 335.50 kB 120,892.00 kB 18 549.00 kB 98,027.50 kB 19 622.00 kB 79,497.00 kB 20 23,109.50 kB 66,737.50 kB 21 820.50 kB 56,245.50 kB 22 93.50 kB 45,613.50 kB 23 181.50 kB 36,978.00 kB Jul 17 00 1,585.00 kB 30,195.50 kB 01 22,668.00 kB 42,767.50 kB 02 208.50 kB 34,679.50 kB 03 1,504.00 kB 28,275.50 kB 04 4,400.50 kB 23,837.00 kB 05 12,848.00 kB 22,975.00 kB 06 18,431.00 kB 33,929.50 kB 07 1,102.00 kB 27,700.50 kB 08 595.00 kB 23,726.00 kB 09 206,575.67 kB 547,550.00 kB 10 1,248.50 kB 420,458.00 kB 11 324,012.50 kB 614,854.00 kB 12 47,198.00 kB 529,004.00 kB 13 186,288.67 kB 503,581.00 kB 14 740.00 kB 386,242.50 kB 15 936.50 kB 313,039.00 kB 16 6,112.00 kB 254,214.50 kB 17 1,311.50 kB 206,653.50 kB 18 336.50 kB 167,499.50 kB 19 280.00 kB 135,727.50 kB 20 138.00 kB 109,965.50 kB 21 665.00 kB 89,152.50 kB 22 162.00 kB 72,290.50 kB 23 398.00 kB 58,608.50 kB Jul 18 00 4,030.50 kB 48,198.00 kB 01 355.50 kB 39,159.50 kB 02 29,381.00 kB 55,446.50 kB 03 36,626.00 kB 69,224.50 kB 04 453.50 kB 56,156.50 kB 05 23,179.00 kB 49,886.50 kB 06 24,294.00 kB 45,017.50 kB 07 1,146.00 kB 40,641.50 kB 08 608.00 kB 33,072.50 kB 09 697.50 kB 26,903.50 kB 10 1,278.50 kB 22,028.00 kB 11 152.00 kB 18,848.00 kB 12 181,148.00 kB 490,085.00 kB 13 527.50 kB 375,835.50 kB 14 29,999.00 kB 310,097.00 kB 15 852.50 kB 251,366.50 kB 16 1,002.50 kB 203,777.50 kB 17 513.00 kB 165,166.00 kB 18 163.50 kB 133,849.50 kB 19 381.50 kB 108,471.00 kB 20 837.50 kB 87,988.50 kB 21 70,084.50 kB 132,417.00 kB 22 450.00 kB 107,348.50 kB 23 202.50 kB 87,015.50 kB Jul 19 00 4,403.50 kB 71,257.00 kB 01 16,025.50 kB 59,636.00 kB 02 252.50 kB 49,531.50 kB 03 58,436.50 kB 58,436.50 kB 04 295.00 kB 50,058.00 kB 05 46,164.00 kB 47,303.00 kB 06 218,046.00 kB 588,068.67 kB 07 1,455.50 kB 451,186.50 kB 08 2,810.00 kB 366,028.50 kB 09 23,189.00 kB 298,839.00 kB 10 22,573.00 kB 246,427.00 kB 11 7,325.50 kB 202,961.50 kB 12 25,956.50 kB 169,124.50 kB 13 205.00 kB 144,476.00 kB 14 183,392.00 kB 496,289.33 kB 15 2,997.50 kB 381,030.00 kB 16 618.00 kB 308,781.00 kB 17 669.50 kB 250,255.00 kB 18 333.50 kB 202,773.00 kB 19 423.50 kB 164,302.00 kB 20 199.00 kB 133,146.00 kB 21 148.50 kB 107,879.00 kB 22 181.00 kB 87,413.00 kB 23 5,926.50 kB 71,907.50 kB Jul 20 00 58,297.50 kB 80,140.00 kB 01 29,859.00 kB 88,532.00 kB 02 389.00 kB 71,822.50 kB 03 390.50 kB 58,248.00 kB 04 3,469.00 kB 47,682.00 kB 05 1,299.00 kB 39,039.00 kB 06 670.50 kB 31,733.50 kB 07 1,704.00 kB 26,046.50 kB 08 655.50 kB 21,204.00 kB 09 419.00 kB 17,272.50 kB 10 123.00 kB 14,744.00 kB 11 79,742.50 kB 151,389.50 kB 12 23,524.00 kB 125,014.50 kB 13 178.00 kB 103,375.00 kB 14 363.50 kB 83,805.50 kB 15 450.50 kB 67,945.00 kB 16 420.50 kB 55,136.00 kB 17 98.50 kB 44,679.50 kB 18 88.00 kB 36,211.00 kB 19 103.00 kB 29,349.00 kB 20 166.00 kB 25,045.00 kB 21 143.00 kB 21,434.50 kB 22 105.00 kB 17,383.00 kB 23 99.50 kB 14,098.50 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jul 14 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 15 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 16 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 17 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 18 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 19 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 20 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 39.15 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2024-07-17 12:35:09 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 39.15 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2024-07-17 12:35:09 Date
Analyzes per table
Key values
- pubc.log_query (114) Main table analyzed (database ctdprd51)
- 125 analyzes Total
Vacuums per table
Key values
- pubc.log_query (14) Main table vacuumed on database ctdprd51
- 23 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 14 12 3,761 0 673 0 0 1,194 413 2,970,542 ctdprd51.pub2.term_set_enrichment_agent 2 0 700,905 0 297,638 0 0 350,177 12 20,759,251 ctdprd51.pub2.term_set_enrichment 2 0 13,898 0 5,933 0 0 6,843 4 433,551 ctdprd51.pg_toast.pg_toast_2619 1 1 3,546 0 1,145 0 10,017 3,064 996 491,542 ctdprd51.pg_catalog.pg_statistic 1 1 637 0 93 0 36 382 90 462,372 ctdprd51.pg_toast.pg_toast_486223 1 0 48 0 0 0 0 1 0 188 ctdprd51.pub2.term_comp 1 0 169 0 34 0 0 33 2 16,854 ctdprd51.pub2.term_comp_agent 1 0 1,344 0 76 0 0 627 2 49,060 Total 23 14 724,308 600 305,592 0 10,053 362,321 1,519 25,183,360 Tuples removed per table
Key values
- pg_toast.pg_toast_2619 (3822) Main table with removed tuples on database ctdprd51
- 4320 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_toast.pg_toast_2619 1 1 3,822 18,363 0 0 12,592 ctdprd51.pg_catalog.pg_statistic 1 1 380 2,570 0 0 290 ctdprd51.pubc.log_query 14 12 118 15,333 0 0 639 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 155,142,730 0 0 1,762,987 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 0 0 0 ctdprd51.pub2.term_comp 1 0 0 7,088 0 0 68 ctdprd51.pub2.term_comp_agent 1 0 0 158,400 0 0 1,327 ctdprd51.pub2.term_set_enrichment 2 0 0 2,147,974 0 0 35,572 Total 23 14 4,320 157,492,458 0 0 1,813,475 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pg_toast.pg_toast_2619 1 1 3822 0 ctdprd51.pubc.log_query 14 12 118 0 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 0 ctdprd51.pg_catalog.pg_statistic 1 1 380 0 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 ctdprd51.pub2.term_comp 1 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pub2.term_set_enrichment 2 0 0 0 Total 23 14 4,320 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jul 14 00 0 1 01 0 1 02 0 1 03 0 2 04 0 0 05 0 3 06 0 0 07 0 1 08 0 0 09 0 1 10 0 0 11 0 1 12 0 0 13 0 0 14 0 0 15 0 1 16 0 0 17 0 0 18 0 1 19 0 0 20 0 1 21 0 0 22 0 0 23 0 0 Jul 15 00 0 0 01 0 1 02 0 1 03 0 2 04 0 2 05 0 3 06 0 0 07 0 2 08 0 0 09 0 1 10 0 0 11 0 1 12 0 0 13 0 0 14 0 0 15 0 1 16 0 0 17 0 1 18 0 0 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 Jul 16 00 0 0 01 0 1 02 0 2 03 0 2 04 0 0 05 0 5 06 0 0 07 0 1 08 0 0 09 0 2 10 0 1 11 0 0 12 0 1 13 0 0 14 0 0 15 0 1 16 0 0 17 0 0 18 0 0 19 0 1 20 0 0 21 0 1 22 0 0 23 0 0 Jul 17 00 0 1 01 0 1 02 0 2 03 0 1 04 0 1 05 0 4 06 0 0 07 0 1 08 0 2 09 0 0 10 0 1 11 0 1 12 0 1 13 0 0 14 0 1 15 0 0 16 0 0 17 0 1 18 0 0 19 0 0 20 0 0 21 0 1 22 0 0 23 0 1 Jul 18 00 0 1 01 0 2 02 0 2 03 0 1 04 0 2 05 0 3 06 0 0 07 0 1 08 0 1 09 0 1 10 0 0 11 0 1 12 0 1 13 0 1 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 1 23 0 0 Jul 19 00 0 1 01 0 1 02 0 2 03 0 2 04 0 1 05 0 5 06 0 1 07 0 0 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 0 0 14 0 0 15 0 1 16 0 0 17 0 0 18 0 0 19 0 1 20 0 0 21 0 0 22 0 0 23 0 1 Jul 20 00 0 1 01 0 2 02 0 1 03 0 2 04 0 1 05 0 3 06 0 1 07 0 0 08 0 1 09 0 0 10 0 1 11 0 0 12 0 0 13 0 1 14 0 0 15 0 1 16 0 1 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 - 39.15 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 4,335 Total read queries
- 402 Total write queries
Queries by database
Key values
- unknown Main database
- 3,217 Requests
- 14h39s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 8,720 Requests
User Request type Count Duration postgres Total 108 42m copy to 108 42m pubeu Total 3,604 19h13m51s cte 71 3m40s select 3,533 19h10m10s qaeu Total 80 3m21s cte 17 56s879ms select 63 2m24s unknown Total 8,720 1d12h32m3s copy to 676 6h25m20s cte 186 8m5s others 9 44s379ms select 7,849 1d5h57m52s Duration by user
Key values
- 1d12h32m3s (unknown) Main time consuming user
User Request type Count Duration postgres Total 108 42m copy to 108 42m pubeu Total 3,604 19h13m51s cte 71 3m40s select 3,533 19h10m10s qaeu Total 80 3m21s cte 17 56s879ms select 63 2m24s unknown Total 8,720 1d12h32m3s copy to 676 6h25m20s cte 186 8m5s others 9 44s379ms select 7,849 1d5h57m52s Queries by host
Key values
- unknown Main host
- 12,512 Requests
- 2d8h31m16s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 4,695 Requests
- 22h18m24s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-07-15 14:21:09 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 4,500 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 2h35m19s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2024-07-15 18:12:56 - Bind query: yes ]
2 2h31m44s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2024-07-15 17:35:42 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
3 2h25m7s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2024-07-15 17:17:55 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
4 23m23s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-07-20 19:41:35 ]
5 23m17s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-07-20 19:00:08 ]
6 18m46s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 20:43:51 - Bind query: yes ]
7 18m15s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 04:47:18 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
8 18m15s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 22:03:11 - Bind query: yes ]
9 17m34s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 16:49:32 - Bind query: yes ]
10 17m21s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 07:18:55 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
11 17m19s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 16:57:42 - Bind query: yes ]
12 17m18s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 16:51:32 - Bind query: yes ]
13 17m16s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 10:00:14 - Bind query: yes ]
14 17m13s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 20:55:54 - Bind query: yes ]
15 17m12s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 07:21:55 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
16 17m12s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 11:11:00 - Bind query: yes ]
17 17m11s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 04:52:27 - Bind query: yes ]
18 17m11s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 03:22:01 - Bind query: yes ]
19 17m10s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 18:25:14 - Bind query: yes ]
20 17m10s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-20 10:33:41 - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 7h32m11s 3 2h25m7s 2h35m19s 2h30m43s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 15 17 2 4h56m52s 2h28m26s 18 1 2h35m19s 2h35m19s [ User: pubeu - Total duration: 4h56m52s - Times executed: 2 ]
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-15 18:12:56 Duration: 2h35m19s Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-15 17:35:42 Duration: 2h31m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-15 17:17:55 Duration: 2h25m7s Database: ctdprd51 User: pubeu Bind query: yes
2 7h10m36s 98 1s235ms 18m46s 4m23s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 14 04 1 3m36s 3m36s 17 1 3m37s 3m37s Jul 15 02 1 3s63ms 3s63ms 04 1 3m36s 3m36s 07 1 1s558ms 1s558ms 09 1 2m30s 2m30s 18 1 3m36s 3m36s Jul 16 17 1 3m36s 3m36s Jul 17 04 1 3m39s 3m39s 17 1 3m37s 3m37s Jul 18 17 1 1s547ms 1s547ms Jul 19 06 1 1s666ms 1s666ms 11 1 1m37s 1m37s 13 1 2m27s 2m27s 23 1 1s505ms 1s505ms Jul 20 03 4 25m45s 6m26s 04 5 35m33s 7m6s 05 2 4s331ms 2s165ms 06 1 1s235ms 1s235ms 07 5 43m6s 8m37s 09 2 8m30s 4m15s 10 5 34m32s 6m54s 11 3 30m3s 10m1s 12 2 3s407ms 1s703ms 14 6 30m56s 5m9s 15 8 17m58s 2m14s 16 14 59m45s 4m16s 17 1 1s538ms 1s538ms 18 4 25m52s 6m28s 19 2 6s642ms 3s321ms 20 7 48m49s 6m58s 21 5 3m25s 41s155ms 22 7 33m49s 4m49s [ User: pubeu - Total duration: 2h7m34s - Times executed: 30 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 20:43:51 Duration: 18m46s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 04:47:18 Duration: 18m15s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 22:03:11 Duration: 18m15s Bind query: yes
3 1h54m13s 7 16m14s 16m23s 16m19s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 14 00 1 16m16s 16m16s Jul 15 00 1 16m18s 16m18s Jul 16 00 1 16m18s 16m18s Jul 17 00 1 16m14s 16m14s Jul 18 00 1 16m20s 16m20s Jul 19 00 1 16m21s 16m21s Jul 20 00 1 16m23s 16m23s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-20 00:16:24 Duration: 16m23s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-19 00:16:22 Duration: 16m21s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-18 00:16:22 Duration: 16m20s
4 27m49s 412 3s873ms 6s253ms 4s52ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 14 01 7 27s845ms 3s977ms 02 3 11s950ms 3s983ms 03 1 4s127ms 4s127ms 05 4 16s831ms 4s207ms 06 4 15s855ms 3s963ms 07 1 4s154ms 4s154ms 09 2 8s51ms 4s25ms 10 6 24s177ms 4s29ms 11 3 11s740ms 3s913ms 14 2 7s834ms 3s917ms 15 1 3s964ms 3s964ms 16 1 3s931ms 3s931ms 18 4 15s776ms 3s944ms Jul 15 01 1 3s927ms 3s927ms 03 2 7s823ms 3s911ms 04 6 23s984ms 3s997ms 05 3 11s833ms 3s944ms 06 2 7s822ms 3s911ms 07 1 3s932ms 3s932ms 08 1 3s944ms 3s944ms 09 2 7s896ms 3s948ms 10 2 7s847ms 3s923ms 11 2 8s91ms 4s45ms 12 1 3s892ms 3s892ms 13 5 19s749ms 3s949ms 14 2 7s826ms 3s913ms 16 17 1m12s 4s253ms 17 73 5m1s 4s125ms 20 1 3s909ms 3s909ms 22 2 7s914ms 3s957ms 23 13 54s296ms 4s176ms Jul 16 00 1 3s934ms 3s934ms 01 1 3s979ms 3s979ms 02 1 4s293ms 4s293ms 03 5 19s716ms 3s943ms 04 4 15s788ms 3s947ms 05 1 3s961ms 3s961ms 06 1 3s964ms 3s964ms 07 1 4s27ms 4s27ms 08 4 15s834ms 3s958ms 10 2 7s997ms 3s998ms 11 2 7s912ms 3s956ms 12 1 3s970ms 3s970ms 13 3 12s35ms 4s11ms 14 6 24s183ms 4s30ms 15 1 3s950ms 3s950ms 16 3 14s786ms 4s928ms 18 3 11s841ms 3s947ms 19 48 3m13s 4s40ms 20 1 3s968ms 3s968ms 22 6 23s701ms 3s950ms 23 5 21s617ms 4s323ms Jul 17 02 12 47s106ms 3s925ms 03 4 16s175ms 4s43ms 04 3 11s817ms 3s939ms 05 5 19s756ms 3s951ms 06 1 4s53ms 4s53ms 08 1 4s10ms 4s10ms 10 5 22s122ms 4s424ms 11 3 11s871ms 3s957ms 12 3 11s891ms 3s963ms 14 2 7s815ms 3s907ms 15 2 8s115ms 4s57ms 16 2 7s923ms 3s961ms 21 4 15s807ms 3s951ms 22 1 3s902ms 3s902ms 23 2 8s16ms 4s8ms Jul 18 01 3 11s799ms 3s933ms 02 1 3s939ms 3s939ms 03 3 12s390ms 4s130ms 06 1 3s934ms 3s934ms 08 3 11s806ms 3s935ms 09 1 3s894ms 3s894ms 10 4 16s919ms 4s229ms 11 8 31s556ms 3s944ms 12 4 15s691ms 3s922ms 13 4 16s44ms 4s11ms 14 2 7s978ms 3s989ms 15 2 8s82ms 4s41ms 16 2 7s874ms 3s937ms 17 1 3s994ms 3s994ms 19 1 4s1ms 4s1ms 23 1 3s910ms 3s910ms Jul 19 00 3 11s754ms 3s918ms 01 1 3s922ms 3s922ms 02 4 17s430ms 4s357ms 04 2 7s899ms 3s949ms 05 1 3s976ms 3s976ms 06 4 16s45ms 4s11ms 07 1 3s972ms 3s972ms 08 2 8s286ms 4s143ms 09 1 3s917ms 3s917ms 10 2 8s10ms 4s5ms 11 2 7s940ms 3s970ms 13 2 8s266ms 4s133ms 14 1 3s975ms 3s975ms 15 2 7s909ms 3s954ms 22 1 3s908ms 3s908ms Jul 20 02 1 3s993ms 3s993ms 07 1 4s10ms 4s10ms 08 2 8s62ms 4s31ms 09 1 4s137ms 4s137ms 10 1 3s969ms 3s969ms 12 2 7s950ms 3s975ms 13 8 32s464ms 4s58ms 14 1 3s985ms 3s985ms [ User: pubeu - Total duration: 13m29s - Times executed: 201 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1256849') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1256849') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-17 10:48:05 Duration: 6s253ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-16 16:58:00 Duration: 5s489ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1334760') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1334760') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-16 16:12:46 Duration: 5s304ms Database: ctdprd51 User: pubeu Bind query: yes
5 23m23s 1 23m23s 23m23s 23m23s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 20 19 1 23m23s 23m23s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-20 19:41:35 Duration: 23m23s
6 23m17s 1 23m17s 23m17s 23m17s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 20 19 1 23m17s 23m17s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-20 19:00:08 Duration: 23m17s
7 21m34s 580 1s3ms 5s740ms 2s231ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 14 19 1 1s910ms 1s910ms 20 2 3s513ms 1s756ms Jul 17 08 5 13s454ms 2s690ms 21 1 1s993ms 1s993ms Jul 19 03 1 2s557ms 2s557ms 17 1 1s8ms 1s8ms Jul 20 01 4 6s672ms 1s668ms 02 10 28s192ms 2s819ms 03 68 2m25s 2s134ms 04 40 1m20s 2s16ms 05 28 1m7s 2s397ms 06 36 1m19s 2s203ms 07 32 1m10s 2s205ms 08 25 52s902ms 2s116ms 09 12 28s490ms 2s374ms 10 8 24s946ms 3s118ms 11 12 30s466ms 2s538ms 12 2 7s669ms 3s834ms 13 1 1s231ms 1s231ms 14 14 35s187ms 2s513ms 15 22 57s141ms 2s597ms 16 27 1m6s 2s481ms 17 85 3m13s 2s281ms 18 67 2m30s 2s242ms 19 15 24s815ms 1s654ms 20 36 1m12s 2s10ms 21 21 37s764ms 1s798ms 22 4 8s139ms 2s34ms [ User: pubeu - Total duration: 5m26s - Times executed: 135 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '650196' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '650196') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-20 18:34:24 Duration: 5s740ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '650196' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '650196') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:02:32 Duration: 5s721ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '650196' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '650196') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:03:33 Duration: 5s709ms Database: ctdprd51 User: pubeu Bind query: yes
8 15m11s 204 1s2ms 6s134ms 4s468ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 14 02 1 5s264ms 5s264ms 03 1 5s166ms 5s166ms 10 1 1s18ms 1s18ms 14 1 1s39ms 1s39ms 18 1 1s11ms 1s11ms Jul 15 01 1 5s21ms 5s21ms 04 2 6s275ms 3s137ms 11 1 5s16ms 5s16ms 14 1 5s751ms 5s751ms 17 2 11s951ms 5s975ms 23 2 6s250ms 3s125ms Jul 16 02 4 21s241ms 5s310ms 03 1 1s2ms 1s2ms 04 3 15s446ms 5s148ms 07 2 10s140ms 5s70ms 09 1 5s277ms 5s277ms 12 1 5s267ms 5s267ms 13 1 5s54ms 5s54ms 14 1 1s11ms 1s11ms 16 1 5s555ms 5s555ms 22 1 5s103ms 5s103ms Jul 17 00 1 5s258ms 5s258ms 03 4 21s367ms 5s341ms 07 1 5s498ms 5s498ms 22 1 5s137ms 5s137ms Jul 18 00 1 5s171ms 5s171ms 01 1 5s15ms 5s15ms 05 1 1s15ms 1s15ms 14 1 5s158ms 5s158ms 19 3 15s751ms 5s250ms 20 3 15s903ms 5s301ms 22 4 20s991ms 5s247ms Jul 19 01 1 5s157ms 5s157ms 02 3 15s670ms 5s223ms 04 2 10s312ms 5s156ms 05 1 5s111ms 5s111ms 07 1 5s109ms 5s109ms 08 1 5s514ms 5s514ms 10 3 16s356ms 5s452ms 13 3 15s650ms 5s216ms 15 1 5s299ms 5s299ms 16 1 5s76ms 5s76ms 17 2 10s309ms 5s154ms Jul 20 00 1 5s560ms 5s560ms 02 1 1s11ms 1s11ms 03 2 10s730ms 5s365ms 04 5 21s813ms 4s362ms 05 5 17s701ms 3s540ms 06 11 50s658ms 4s605ms 07 3 11s504ms 3s834ms 08 16 50s645ms 3s165ms 09 17 1m9s 4s78ms 10 16 1m12s 4s539ms 11 8 34s539ms 4s317ms 12 4 20s962ms 5s240ms 13 3 16s70ms 5s356ms 14 3 15s497ms 5s165ms 15 6 27s755ms 4s625ms 16 1 5s299ms 5s299ms 17 7 28s599ms 4s85ms 18 5 22s372ms 4s474ms 19 4 17s327ms 4s331ms 20 2 10s453ms 5s226ms 21 9 48s918ms 5s435ms 22 1 1s127ms 1s127ms 23 4 16s395ms 4s98ms [ User: pubeu - Total duration: 5m40s - Times executed: 71 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1373913' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-15 17:13:43 Duration: 6s134ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1397490' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-20 21:51:13 Duration: 6s18ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1291824' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-15 17:20:32 Duration: 5s816ms Bind query: yes
9 13m50s 25 32s611ms 33s388ms 33s204ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 14 06 1 33s273ms 33s273ms 10 1 33s257ms 33s257ms 14 1 33s291ms 33s291ms 18 1 33s244ms 33s244ms Jul 15 06 1 33s209ms 33s209ms 10 1 33s176ms 33s176ms 14 1 33s199ms 33s199ms 18 1 33s161ms 33s161ms Jul 16 06 1 33s156ms 33s156ms 10 1 33s388ms 33s388ms 14 1 33s246ms 33s246ms 18 1 33s182ms 33s182ms Jul 17 06 1 33s291ms 33s291ms 10 1 33s209ms 33s209ms 14 1 33s216ms 33s216ms 18 1 33s272ms 33s272ms Jul 18 06 1 33s205ms 33s205ms 10 1 33s176ms 33s176ms 14 1 33s241ms 33s241ms 18 1 33s215ms 33s215ms Jul 19 06 1 33s222ms 33s222ms 10 1 33s217ms 33s217ms 14 1 33s208ms 33s208ms 18 1 33s245ms 33s245ms Jul 20 19 1 32s611ms 32s611ms [ User: postgres - Total duration: 13m17s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m17s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-16 10:05:35 Duration: 33s388ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-17 06:05:35 Duration: 33s291ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-14 14:05:35 Duration: 33s291ms Database: ctdprd51 User: postgres Application: pg_dump
10 13m45s 109 1s31ms 23s347ms 7s577ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 15 01 1 19s551ms 19s551ms 02 1 18s993ms 18s993ms 07 1 1s605ms 1s605ms 09 1 1s370ms 1s370ms Jul 18 12 1 6s521ms 6s521ms Jul 19 02 1 1s919ms 1s919ms 23 1 1s656ms 1s656ms Jul 20 00 4 16s555ms 4s138ms 03 4 50s225ms 12s556ms 04 4 28s835ms 7s208ms 05 4 26s757ms 6s689ms 06 3 12s28ms 4s9ms 07 11 1m42s 9s352ms 08 5 50s323ms 10s64ms 09 2 6s52ms 3s26ms 10 9 1m40s 11s126ms 11 2 6s784ms 3s392ms 12 1 3s476ms 3s476ms 14 14 1m20s 5s741ms 15 5 34s129ms 6s825ms 16 7 57s382ms 8s197ms 17 4 28s595ms 7s148ms 18 6 39s323ms 6s553ms 19 3 12s619ms 4s206ms 20 3 23s407ms 7s802ms 21 3 32s103ms 10s701ms 22 7 43s552ms 6s221ms 23 1 18s742ms 18s742ms [ User: pubeu - Total duration: 2m47s - Times executed: 27 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 21:58:23 Duration: 23s347ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 20:13:14 Duration: 20s960ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:01:39 Duration: 20s719ms Database: ctdprd51 User: pubeu Bind query: yes
11 13m26s 273 1s3ms 11s104ms 2s952ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 14 04 2 3s642ms 1s821ms 10 2 11s304ms 5s652ms Jul 15 00 1 2s179ms 2s179ms 04 2 3s632ms 1s816ms 10 1 1s72ms 1s72ms 13 1 1s68ms 1s68ms 17 1 2s886ms 2s886ms 20 1 2s425ms 2s425ms 21 1 1s34ms 1s34ms 23 1 2s87ms 2s87ms Jul 16 04 1 2s564ms 2s564ms 07 2 2s335ms 1s167ms 08 2 2s799ms 1s399ms 10 1 1s190ms 1s190ms 11 1 2s486ms 2s486ms 15 1 2s407ms 2s407ms 21 4 11s793ms 2s948ms Jul 17 00 1 2s390ms 2s390ms 02 2 4s918ms 2s459ms 04 1 1s174ms 1s174ms 05 2 5s998ms 2s999ms 06 2 3s225ms 1s612ms 07 1 2s104ms 2s104ms 08 1 2s116ms 2s116ms 09 1 1s51ms 1s51ms 13 1 5s52ms 5s52ms 17 1 6s740ms 6s740ms Jul 18 00 1 3s12ms 3s12ms 01 1 1s343ms 1s343ms 02 1 2s125ms 2s125ms 04 1 2s561ms 2s561ms 07 1 1s116ms 1s116ms 11 1 1s61ms 1s61ms 12 2 2s926ms 1s463ms 19 1 1s191ms 1s191ms 23 1 1s180ms 1s180ms Jul 19 04 1 2s389ms 2s389ms 11 1 1s91ms 1s91ms 14 1 3s903ms 3s903ms 19 1 2s262ms 2s262ms 23 3 9s11ms 3s3ms Jul 20 00 1 1s7ms 1s7ms 02 3 8s509ms 2s836ms 03 9 29s462ms 3s273ms 04 6 16s972ms 2s828ms 05 5 16s3ms 3s200ms 06 17 57s520ms 3s383ms 07 7 21s689ms 3s98ms 08 6 16s201ms 2s700ms 09 13 40s944ms 3s149ms 10 11 39s706ms 3s609ms 11 28 1m26s 3s103ms 12 14 43s69ms 3s76ms 13 8 23s588ms 2s948ms 14 6 18s110ms 3s18ms 15 10 28s967ms 2s896ms 16 17 1m 3s574ms 17 5 9s471ms 1s894ms 18 4 11s717ms 2s929ms 19 15 42s994ms 2s866ms 20 12 32s682ms 2s723ms 21 12 40s336ms 3s361ms 22 7 27s83ms 3s869ms 23 2 5s514ms 2s757ms [ User: pubeu - Total duration: 3m57s - Times executed: 89 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080559') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 06:25:06 Duration: 11s104ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080559') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 16:58:05 Duration: 11s73ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073988') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 10:58:35 Duration: 8s173ms Bind query: yes
12 13m7s 289 1s23ms 5s449ms 2s724ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 14 10 2 7s493ms 3s746ms 20 1 3s799ms 3s799ms Jul 15 05 1 1s601ms 1s601ms 11 1 1s31ms 1s31ms Jul 17 04 2 3s602ms 1s801ms 05 2 3s94ms 1s547ms Jul 19 04 2 2s148ms 1s74ms 08 1 1s70ms 1s70ms 13 2 2s508ms 1s254ms 21 6 16s739ms 2s789ms 23 2 2s383ms 1s191ms Jul 20 00 8 22s569ms 2s821ms 01 1 5s50ms 5s50ms 02 5 9s461ms 1s892ms 03 5 17s703ms 3s540ms 04 9 20s808ms 2s312ms 05 7 19s684ms 2s812ms 06 26 1m3s 2s436ms 07 14 51s195ms 3s656ms 08 25 1m6s 2s655ms 09 17 53s59ms 3s121ms 10 25 1m5s 2s603ms 11 13 37s112ms 2s854ms 12 11 34s693ms 3s153ms 13 10 20s832ms 2s83ms 14 20 55s993ms 2s799ms 15 6 21s191ms 3s531ms 16 12 34s792ms 2s899ms 17 10 27s297ms 2s729ms 18 10 24s634ms 2s463ms 19 10 24s948ms 2s494ms 20 7 14s18ms 2s2ms 21 5 17s12ms 3s402ms 22 10 29s776ms 2s977ms 23 1 5s264ms 5s264ms [ User: pubeu - Total duration: 2m49s - Times executed: 62 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 08:56:16 Duration: 5s449ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 09:57:53 Duration: 5s404ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 19:08:51 Duration: 5s362ms Bind query: yes
13 11m6s 48 1s72ms 57s606ms 13s883ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 14 20 1 20s830ms 20s830ms Jul 15 13 1 2s919ms 2s919ms 23 1 42s924ms 42s924ms Jul 16 05 3 5s788ms 1s929ms 07 3 9s765ms 3s255ms 08 5 13s586ms 2s717ms 09 12 25s505ms 2s125ms Jul 17 06 5 2m59s 35s825ms 07 7 5m26s 46s623ms 09 1 1s413ms 1s413ms Jul 18 14 1 1s534ms 1s534ms Jul 19 01 1 1s597ms 1s597ms 02 2 2s169ms 1s84ms 08 1 1s406ms 1s406ms Jul 20 05 1 9s669ms 9s669ms 09 1 15s697ms 15s697ms 10 1 1s822ms 1s822ms 13 1 4s297ms 4s297ms [ User: pubeu - Total duration: 4m41s - Times executed: 26 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 07:49:42 Duration: 57s606ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 07:47:28 Duration: 45s922ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 06:07:36 Duration: 45s859ms Database: ctdprd51 User: pubeu Bind query: yes
14 10m13s 199 1s177ms 6s416ms 3s84ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 15 05 1 5s939ms 5s939ms Jul 17 04 2 8s707ms 4s353ms 05 1 1s846ms 1s846ms Jul 19 21 4 12s739ms 3s184ms 23 1 1s725ms 1s725ms Jul 20 00 4 13s930ms 3s482ms 02 7 21s396ms 3s56ms 03 8 25s539ms 3s192ms 04 4 15s642ms 3s910ms 05 9 27s442ms 3s49ms 06 15 44s680ms 2s978ms 07 14 42s555ms 3s39ms 08 16 43s504ms 2s719ms 09 19 1m2s 3s299ms 10 24 1m14s 3s101ms 11 12 35s135ms 2s927ms 12 4 15s641ms 3s910ms 13 6 19s469ms 3s244ms 14 14 39s971ms 2s855ms 15 8 28s680ms 3s585ms 16 6 14s690ms 2s448ms 17 4 19s762ms 4s940ms 18 2 6s472ms 3s236ms 20 2 5s468ms 2s734ms 21 9 15s376ms 1s708ms 22 3 10s466ms 3s488ms [ User: pubeu - Total duration: 1m57s - Times executed: 39 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 22:06:04 Duration: 6s416ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:32:42 Duration: 6s197ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 02:54:42 Duration: 6s186ms Bind query: yes
15 8m47s 3 7s301ms 8m7s 2m55s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by diseaseterm.nm_sort, phenotypeterm.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 16 00 1 32s814ms 32s814ms Jul 20 05 1 8m7s 8m7s 22 1 7s301ms 7s301ms [ User: pubeu - Total duration: 32s814ms - Times executed: 1 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1242915') and diseaseTerm.object_type_id = 3 ORDER BY diseaseTerm.nm_sort, phenotypeTerm.nm_sort LIMIT 50;
Date: 2024-07-20 05:38:05 Duration: 8m7s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1222830') and diseaseTerm.object_type_id = 3 ORDER BY diseaseTerm.nm_sort, phenotypeTerm.nm_sort LIMIT 50;
Date: 2024-07-16 00:59:00 Duration: 32s814ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1211539') and diseaseTerm.object_type_id = 3 ORDER BY diseaseTerm.nm_sort, phenotypeTerm.nm_sort LIMIT 50;
Date: 2024-07-20 22:19:10 Duration: 7s301ms Bind query: yes
16 8m1s 1 8m1s 8m1s 8m1s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by phenotypeterm.nm_sort, diseaseterm.nm_sort limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 20 05 1 8m1s 8m1s -
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1242915') and diseaseTerm.object_type_id = 3 ORDER BY phenotypeTerm.nm_sort, diseaseTerm.nm_sort LIMIT 50;
Date: 2024-07-20 05:22:50 Duration: 8m1s Bind query: yes
17 6m56s 68 1s8ms 16s548ms 6s131ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 14 16 1 1s13ms 1s13ms Jul 15 01 2 32s909ms 16s454ms 02 1 15s281ms 15s281ms 07 1 2s445ms 2s445ms Jul 16 16 1 1s109ms 1s109ms Jul 17 12 1 1s8ms 1s8ms Jul 18 02 1 3s813ms 3s813ms 06 1 4s206ms 4s206ms 23 1 3s333ms 3s333ms Jul 19 03 1 1s42ms 1s42ms 16 1 5s502ms 5s502ms Jul 20 03 1 10s536ms 10s536ms 04 1 10s481ms 10s481ms 05 2 18s296ms 9s148ms 06 1 1s68ms 1s68ms 07 3 3s113ms 1s37ms 08 1 2s225ms 2s225ms 09 3 18s958ms 6s319ms 10 3 18s89ms 6s29ms 11 3 21s132ms 7s44ms 13 1 15s299ms 15s299ms 14 8 45s562ms 5s695ms 15 3 25s2ms 8s334ms 16 3 20s443ms 6s814ms 17 3 18s781ms 6s260ms 18 4 37s216ms 9s304ms 19 1 1s70ms 1s70ms 21 6 24s661ms 4s110ms 22 7 43s890ms 6s270ms 23 2 9s425ms 4s712ms [ User: pubeu - Total duration: 2m38s - Times executed: 27 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-15 01:23:54 Duration: 16s548ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-15 01:23:53 Duration: 16s360ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:52:12 Duration: 15s712ms Database: ctdprd51 User: pubeu Bind query: yes
18 6m42s 1 6m42s 6m42s 6m42s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 20 19 1 6m42s 6m42s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-20 19:53:04 Duration: 6m42s
19 6m40s 1 6m40s 6m40s 6m40s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 20 19 1 6m40s 6m40s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-20 19:11:36 Duration: 6m40s
20 5m57s 16 1s933ms 1m12s 22s328ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 16 18 1 42s832ms 42s832ms Jul 20 04 4 2m29s 37s457ms 05 1 2s200ms 2s200ms 06 1 2s241ms 2s241ms 12 1 32s166ms 32s166ms 16 1 2s659ms 2s659ms 17 3 1m23s 27s944ms 18 1 2s245ms 2s245ms 19 1 35s26ms 35s26ms 20 1 2s221ms 2s221ms 21 1 1s992ms 1s992ms [ User: pubeu - Total duration: 1m39s - Times executed: 5 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1428326')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-07-20 04:07:44 Duration: 1m12s Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1428326')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-07-20 04:50:49 Duration: 1m12s Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2071921')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-07-20 17:39:02 Duration: 49s866ms Database: ctdprd51 User: pubeu Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 580 21m34s 1s3ms 5s740ms 2s231ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 14 19 1 1s910ms 1s910ms 20 2 3s513ms 1s756ms Jul 17 08 5 13s454ms 2s690ms 21 1 1s993ms 1s993ms Jul 19 03 1 2s557ms 2s557ms 17 1 1s8ms 1s8ms Jul 20 01 4 6s672ms 1s668ms 02 10 28s192ms 2s819ms 03 68 2m25s 2s134ms 04 40 1m20s 2s16ms 05 28 1m7s 2s397ms 06 36 1m19s 2s203ms 07 32 1m10s 2s205ms 08 25 52s902ms 2s116ms 09 12 28s490ms 2s374ms 10 8 24s946ms 3s118ms 11 12 30s466ms 2s538ms 12 2 7s669ms 3s834ms 13 1 1s231ms 1s231ms 14 14 35s187ms 2s513ms 15 22 57s141ms 2s597ms 16 27 1m6s 2s481ms 17 85 3m13s 2s281ms 18 67 2m30s 2s242ms 19 15 24s815ms 1s654ms 20 36 1m12s 2s10ms 21 21 37s764ms 1s798ms 22 4 8s139ms 2s34ms [ User: pubeu - Total duration: 5m26s - Times executed: 135 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '650196' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '650196') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-20 18:34:24 Duration: 5s740ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '650196' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '650196') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:02:32 Duration: 5s721ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '650196' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '650196') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:03:33 Duration: 5s709ms Database: ctdprd51 User: pubeu Bind query: yes
2 412 27m49s 3s873ms 6s253ms 4s52ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 14 01 7 27s845ms 3s977ms 02 3 11s950ms 3s983ms 03 1 4s127ms 4s127ms 05 4 16s831ms 4s207ms 06 4 15s855ms 3s963ms 07 1 4s154ms 4s154ms 09 2 8s51ms 4s25ms 10 6 24s177ms 4s29ms 11 3 11s740ms 3s913ms 14 2 7s834ms 3s917ms 15 1 3s964ms 3s964ms 16 1 3s931ms 3s931ms 18 4 15s776ms 3s944ms Jul 15 01 1 3s927ms 3s927ms 03 2 7s823ms 3s911ms 04 6 23s984ms 3s997ms 05 3 11s833ms 3s944ms 06 2 7s822ms 3s911ms 07 1 3s932ms 3s932ms 08 1 3s944ms 3s944ms 09 2 7s896ms 3s948ms 10 2 7s847ms 3s923ms 11 2 8s91ms 4s45ms 12 1 3s892ms 3s892ms 13 5 19s749ms 3s949ms 14 2 7s826ms 3s913ms 16 17 1m12s 4s253ms 17 73 5m1s 4s125ms 20 1 3s909ms 3s909ms 22 2 7s914ms 3s957ms 23 13 54s296ms 4s176ms Jul 16 00 1 3s934ms 3s934ms 01 1 3s979ms 3s979ms 02 1 4s293ms 4s293ms 03 5 19s716ms 3s943ms 04 4 15s788ms 3s947ms 05 1 3s961ms 3s961ms 06 1 3s964ms 3s964ms 07 1 4s27ms 4s27ms 08 4 15s834ms 3s958ms 10 2 7s997ms 3s998ms 11 2 7s912ms 3s956ms 12 1 3s970ms 3s970ms 13 3 12s35ms 4s11ms 14 6 24s183ms 4s30ms 15 1 3s950ms 3s950ms 16 3 14s786ms 4s928ms 18 3 11s841ms 3s947ms 19 48 3m13s 4s40ms 20 1 3s968ms 3s968ms 22 6 23s701ms 3s950ms 23 5 21s617ms 4s323ms Jul 17 02 12 47s106ms 3s925ms 03 4 16s175ms 4s43ms 04 3 11s817ms 3s939ms 05 5 19s756ms 3s951ms 06 1 4s53ms 4s53ms 08 1 4s10ms 4s10ms 10 5 22s122ms 4s424ms 11 3 11s871ms 3s957ms 12 3 11s891ms 3s963ms 14 2 7s815ms 3s907ms 15 2 8s115ms 4s57ms 16 2 7s923ms 3s961ms 21 4 15s807ms 3s951ms 22 1 3s902ms 3s902ms 23 2 8s16ms 4s8ms Jul 18 01 3 11s799ms 3s933ms 02 1 3s939ms 3s939ms 03 3 12s390ms 4s130ms 06 1 3s934ms 3s934ms 08 3 11s806ms 3s935ms 09 1 3s894ms 3s894ms 10 4 16s919ms 4s229ms 11 8 31s556ms 3s944ms 12 4 15s691ms 3s922ms 13 4 16s44ms 4s11ms 14 2 7s978ms 3s989ms 15 2 8s82ms 4s41ms 16 2 7s874ms 3s937ms 17 1 3s994ms 3s994ms 19 1 4s1ms 4s1ms 23 1 3s910ms 3s910ms Jul 19 00 3 11s754ms 3s918ms 01 1 3s922ms 3s922ms 02 4 17s430ms 4s357ms 04 2 7s899ms 3s949ms 05 1 3s976ms 3s976ms 06 4 16s45ms 4s11ms 07 1 3s972ms 3s972ms 08 2 8s286ms 4s143ms 09 1 3s917ms 3s917ms 10 2 8s10ms 4s5ms 11 2 7s940ms 3s970ms 13 2 8s266ms 4s133ms 14 1 3s975ms 3s975ms 15 2 7s909ms 3s954ms 22 1 3s908ms 3s908ms Jul 20 02 1 3s993ms 3s993ms 07 1 4s10ms 4s10ms 08 2 8s62ms 4s31ms 09 1 4s137ms 4s137ms 10 1 3s969ms 3s969ms 12 2 7s950ms 3s975ms 13 8 32s464ms 4s58ms 14 1 3s985ms 3s985ms [ User: pubeu - Total duration: 13m29s - Times executed: 201 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1256849') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1256849') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-17 10:48:05 Duration: 6s253ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-16 16:58:00 Duration: 5s489ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1334760') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1334760') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-16 16:12:46 Duration: 5s304ms Database: ctdprd51 User: pubeu Bind query: yes
3 295 5m44s 1s105ms 2s87ms 1s169ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 14 00 1 1s183ms 1s183ms 01 1 1s135ms 1s135ms 02 2 2s376ms 1s188ms 03 2 2s299ms 1s149ms 04 4 4s648ms 1s162ms 05 2 2s489ms 1s244ms 06 2 2s346ms 1s173ms 10 5 5s808ms 1s161ms 12 2 2s314ms 1s157ms 13 1 1s172ms 1s172ms 14 1 1s163ms 1s163ms 15 4 4s628ms 1s157ms 17 1 1s176ms 1s176ms 18 3 3s444ms 1s148ms 19 1 1s159ms 1s159ms 21 5 5s768ms 1s153ms 22 1 1s194ms 1s194ms 23 3 3s516ms 1s172ms Jul 15 02 2 2s372ms 1s186ms 04 3 3s519ms 1s173ms 05 4 4s889ms 1s222ms 11 2 2s344ms 1s172ms 12 1 1s196ms 1s196ms 14 2 2s313ms 1s156ms 15 1 1s167ms 1s167ms 16 4 4s779ms 1s194ms 20 1 1s154ms 1s154ms 21 2 2s336ms 1s168ms 22 2 2s394ms 1s197ms 23 2 2s330ms 1s165ms Jul 16 00 4 4s629ms 1s157ms 02 1 1s159ms 1s159ms 03 1 1s178ms 1s178ms 04 1 1s155ms 1s155ms 05 2 2s578ms 1s289ms 07 2 2s296ms 1s148ms 08 1 1s159ms 1s159ms 10 1 1s203ms 1s203ms 16 1 1s129ms 1s129ms 18 4 4s619ms 1s154ms 20 1 1s167ms 1s167ms 21 1 1s140ms 1s140ms Jul 17 00 4 4s639ms 1s159ms 02 1 1s189ms 1s189ms 03 2 2s329ms 1s164ms 04 1 1s180ms 1s180ms 05 4 4s826ms 1s206ms 06 1 1s157ms 1s157ms 07 4 4s725ms 1s181ms 08 2 2s394ms 1s197ms 09 3 3s402ms 1s134ms 10 1 1s165ms 1s165ms 11 2 2s345ms 1s172ms 12 1 1s174ms 1s174ms 14 2 2s300ms 1s150ms 15 2 2s339ms 1s169ms 16 3 3s484ms 1s161ms 19 1 1s156ms 1s156ms 22 1 1s186ms 1s186ms 23 1 1s179ms 1s179ms Jul 18 00 3 3s518ms 1s172ms 01 2 2s358ms 1s179ms 02 1 1s147ms 1s147ms 03 4 4s691ms 1s172ms 04 3 3s543ms 1s181ms 05 4 4s873ms 1s218ms 06 1 1s158ms 1s158ms 08 1 1s146ms 1s146ms 09 3 3s484ms 1s161ms 11 4 4s596ms 1s149ms 12 1 1s165ms 1s165ms 13 2 2s319ms 1s159ms 14 2 2s321ms 1s160ms 18 1 1s173ms 1s173ms 20 1 1s156ms 1s156ms 22 1 1s166ms 1s166ms Jul 19 03 2 2s340ms 1s170ms 04 5 5s780ms 1s156ms 05 4 4s836ms 1s209ms 07 3 3s429ms 1s143ms 09 1 1s135ms 1s135ms 10 1 1s154ms 1s154ms 11 1 1s159ms 1s159ms 12 1 1s138ms 1s138ms 13 3 3s404ms 1s134ms 15 1 1s135ms 1s135ms 16 1 1s156ms 1s156ms 17 2 2s313ms 1s156ms 19 1 1s140ms 1s140ms 20 1 1s165ms 1s165ms 21 6 6s916ms 1s152ms 22 1 1s170ms 1s170ms 23 3 3s496ms 1s165ms Jul 20 00 7 8s11ms 1s144ms 01 15 17s437ms 1s162ms 02 3 3s443ms 1s147ms 03 3 3s449ms 1s149ms 04 3 3s494ms 1s164ms 05 3 3s672ms 1s224ms 06 3 3s480ms 1s160ms 07 5 5s797ms 1s159ms 08 4 4s648ms 1s162ms 10 2 2s234ms 1s117ms 11 8 9s240ms 1s155ms 12 7 8s138ms 1s162ms 13 11 12s703ms 1s154ms 14 5 5s780ms 1s156ms 15 4 4s546ms 1s136ms 16 5 6s699ms 1s339ms 17 4 4s693ms 1s173ms 18 2 2s310ms 1s155ms 19 1 1s109ms 1s109ms 20 2 2s417ms 1s208ms 21 2 2s321ms 1s160ms 22 1 1s158ms 1s158ms 23 1 1s196ms 1s196ms [ User: pubeu - Total duration: 2m48s - Times executed: 144 ]
[ User: qaeu - Total duration: 7s633ms - Times executed: 6 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1447778' or receptorTerm.id = '1447778' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-20 16:41:08 Duration: 2s87ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1433030' or receptorTerm.id = '1433030' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-16 05:38:39 Duration: 1s294ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1433030' or receptorTerm.id = '1433030' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-16 05:43:40 Duration: 1s284ms Database: ctdprd51 User: qaeu Bind query: yes
4 289 13m7s 1s23ms 5s449ms 2s724ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 14 10 2 7s493ms 3s746ms 20 1 3s799ms 3s799ms Jul 15 05 1 1s601ms 1s601ms 11 1 1s31ms 1s31ms Jul 17 04 2 3s602ms 1s801ms 05 2 3s94ms 1s547ms Jul 19 04 2 2s148ms 1s74ms 08 1 1s70ms 1s70ms 13 2 2s508ms 1s254ms 21 6 16s739ms 2s789ms 23 2 2s383ms 1s191ms Jul 20 00 8 22s569ms 2s821ms 01 1 5s50ms 5s50ms 02 5 9s461ms 1s892ms 03 5 17s703ms 3s540ms 04 9 20s808ms 2s312ms 05 7 19s684ms 2s812ms 06 26 1m3s 2s436ms 07 14 51s195ms 3s656ms 08 25 1m6s 2s655ms 09 17 53s59ms 3s121ms 10 25 1m5s 2s603ms 11 13 37s112ms 2s854ms 12 11 34s693ms 3s153ms 13 10 20s832ms 2s83ms 14 20 55s993ms 2s799ms 15 6 21s191ms 3s531ms 16 12 34s792ms 2s899ms 17 10 27s297ms 2s729ms 18 10 24s634ms 2s463ms 19 10 24s948ms 2s494ms 20 7 14s18ms 2s2ms 21 5 17s12ms 3s402ms 22 10 29s776ms 2s977ms 23 1 5s264ms 5s264ms [ User: pubeu - Total duration: 2m49s - Times executed: 62 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 08:56:16 Duration: 5s449ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 09:57:53 Duration: 5s404ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 19:08:51 Duration: 5s362ms Bind query: yes
5 273 13m26s 1s3ms 11s104ms 2s952ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 14 04 2 3s642ms 1s821ms 10 2 11s304ms 5s652ms Jul 15 00 1 2s179ms 2s179ms 04 2 3s632ms 1s816ms 10 1 1s72ms 1s72ms 13 1 1s68ms 1s68ms 17 1 2s886ms 2s886ms 20 1 2s425ms 2s425ms 21 1 1s34ms 1s34ms 23 1 2s87ms 2s87ms Jul 16 04 1 2s564ms 2s564ms 07 2 2s335ms 1s167ms 08 2 2s799ms 1s399ms 10 1 1s190ms 1s190ms 11 1 2s486ms 2s486ms 15 1 2s407ms 2s407ms 21 4 11s793ms 2s948ms Jul 17 00 1 2s390ms 2s390ms 02 2 4s918ms 2s459ms 04 1 1s174ms 1s174ms 05 2 5s998ms 2s999ms 06 2 3s225ms 1s612ms 07 1 2s104ms 2s104ms 08 1 2s116ms 2s116ms 09 1 1s51ms 1s51ms 13 1 5s52ms 5s52ms 17 1 6s740ms 6s740ms Jul 18 00 1 3s12ms 3s12ms 01 1 1s343ms 1s343ms 02 1 2s125ms 2s125ms 04 1 2s561ms 2s561ms 07 1 1s116ms 1s116ms 11 1 1s61ms 1s61ms 12 2 2s926ms 1s463ms 19 1 1s191ms 1s191ms 23 1 1s180ms 1s180ms Jul 19 04 1 2s389ms 2s389ms 11 1 1s91ms 1s91ms 14 1 3s903ms 3s903ms 19 1 2s262ms 2s262ms 23 3 9s11ms 3s3ms Jul 20 00 1 1s7ms 1s7ms 02 3 8s509ms 2s836ms 03 9 29s462ms 3s273ms 04 6 16s972ms 2s828ms 05 5 16s3ms 3s200ms 06 17 57s520ms 3s383ms 07 7 21s689ms 3s98ms 08 6 16s201ms 2s700ms 09 13 40s944ms 3s149ms 10 11 39s706ms 3s609ms 11 28 1m26s 3s103ms 12 14 43s69ms 3s76ms 13 8 23s588ms 2s948ms 14 6 18s110ms 3s18ms 15 10 28s967ms 2s896ms 16 17 1m 3s574ms 17 5 9s471ms 1s894ms 18 4 11s717ms 2s929ms 19 15 42s994ms 2s866ms 20 12 32s682ms 2s723ms 21 12 40s336ms 3s361ms 22 7 27s83ms 3s869ms 23 2 5s514ms 2s757ms [ User: pubeu - Total duration: 3m57s - Times executed: 89 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080559') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 06:25:06 Duration: 11s104ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080559') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 16:58:05 Duration: 11s73ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073988') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 10:58:35 Duration: 8s173ms Bind query: yes
6 204 15m11s 1s2ms 6s134ms 4s468ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 14 02 1 5s264ms 5s264ms 03 1 5s166ms 5s166ms 10 1 1s18ms 1s18ms 14 1 1s39ms 1s39ms 18 1 1s11ms 1s11ms Jul 15 01 1 5s21ms 5s21ms 04 2 6s275ms 3s137ms 11 1 5s16ms 5s16ms 14 1 5s751ms 5s751ms 17 2 11s951ms 5s975ms 23 2 6s250ms 3s125ms Jul 16 02 4 21s241ms 5s310ms 03 1 1s2ms 1s2ms 04 3 15s446ms 5s148ms 07 2 10s140ms 5s70ms 09 1 5s277ms 5s277ms 12 1 5s267ms 5s267ms 13 1 5s54ms 5s54ms 14 1 1s11ms 1s11ms 16 1 5s555ms 5s555ms 22 1 5s103ms 5s103ms Jul 17 00 1 5s258ms 5s258ms 03 4 21s367ms 5s341ms 07 1 5s498ms 5s498ms 22 1 5s137ms 5s137ms Jul 18 00 1 5s171ms 5s171ms 01 1 5s15ms 5s15ms 05 1 1s15ms 1s15ms 14 1 5s158ms 5s158ms 19 3 15s751ms 5s250ms 20 3 15s903ms 5s301ms 22 4 20s991ms 5s247ms Jul 19 01 1 5s157ms 5s157ms 02 3 15s670ms 5s223ms 04 2 10s312ms 5s156ms 05 1 5s111ms 5s111ms 07 1 5s109ms 5s109ms 08 1 5s514ms 5s514ms 10 3 16s356ms 5s452ms 13 3 15s650ms 5s216ms 15 1 5s299ms 5s299ms 16 1 5s76ms 5s76ms 17 2 10s309ms 5s154ms Jul 20 00 1 5s560ms 5s560ms 02 1 1s11ms 1s11ms 03 2 10s730ms 5s365ms 04 5 21s813ms 4s362ms 05 5 17s701ms 3s540ms 06 11 50s658ms 4s605ms 07 3 11s504ms 3s834ms 08 16 50s645ms 3s165ms 09 17 1m9s 4s78ms 10 16 1m12s 4s539ms 11 8 34s539ms 4s317ms 12 4 20s962ms 5s240ms 13 3 16s70ms 5s356ms 14 3 15s497ms 5s165ms 15 6 27s755ms 4s625ms 16 1 5s299ms 5s299ms 17 7 28s599ms 4s85ms 18 5 22s372ms 4s474ms 19 4 17s327ms 4s331ms 20 2 10s453ms 5s226ms 21 9 48s918ms 5s435ms 22 1 1s127ms 1s127ms 23 4 16s395ms 4s98ms [ User: pubeu - Total duration: 5m40s - Times executed: 71 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1373913' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-15 17:13:43 Duration: 6s134ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1397490' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-20 21:51:13 Duration: 6s18ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1291824' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-15 17:20:32 Duration: 5s816ms Bind query: yes
7 199 10m13s 1s177ms 6s416ms 3s84ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 15 05 1 5s939ms 5s939ms Jul 17 04 2 8s707ms 4s353ms 05 1 1s846ms 1s846ms Jul 19 21 4 12s739ms 3s184ms 23 1 1s725ms 1s725ms Jul 20 00 4 13s930ms 3s482ms 02 7 21s396ms 3s56ms 03 8 25s539ms 3s192ms 04 4 15s642ms 3s910ms 05 9 27s442ms 3s49ms 06 15 44s680ms 2s978ms 07 14 42s555ms 3s39ms 08 16 43s504ms 2s719ms 09 19 1m2s 3s299ms 10 24 1m14s 3s101ms 11 12 35s135ms 2s927ms 12 4 15s641ms 3s910ms 13 6 19s469ms 3s244ms 14 14 39s971ms 2s855ms 15 8 28s680ms 3s585ms 16 6 14s690ms 2s448ms 17 4 19s762ms 4s940ms 18 2 6s472ms 3s236ms 20 2 5s468ms 2s734ms 21 9 15s376ms 1s708ms 22 3 10s466ms 3s488ms [ User: pubeu - Total duration: 1m57s - Times executed: 39 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 22:06:04 Duration: 6s416ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:32:42 Duration: 6s197ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 02:54:42 Duration: 6s186ms Bind query: yes
8 142 3m19s 1s348ms 1s532ms 1s402ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 14 03 7 9s891ms 1s413ms 04 3 4s277ms 1s425ms 05 2 2s853ms 1s426ms 06 1 1s405ms 1s405ms 08 2 2s779ms 1s389ms 11 1 1s348ms 1s348ms Jul 15 01 1 1s377ms 1s377ms 02 1 1s431ms 1s431ms 03 1 1s416ms 1s416ms 05 2 2s781ms 1s390ms 08 1 1s485ms 1s485ms 11 2 2s818ms 1s409ms 19 1 1s413ms 1s413ms 23 1 1s397ms 1s397ms Jul 16 05 4 5s644ms 1s411ms 07 1 1s420ms 1s420ms 09 1 1s421ms 1s421ms 11 1 1s389ms 1s389ms 23 1 1s386ms 1s386ms Jul 17 00 1 1s405ms 1s405ms 03 1 1s360ms 1s360ms 05 2 2s775ms 1s387ms 07 1 1s531ms 1s531ms 08 1 1s532ms 1s532ms 09 1 1s388ms 1s388ms 10 9 12s570ms 1s396ms 16 1 1s411ms 1s411ms 17 1 1s392ms 1s392ms 18 1 1s394ms 1s394ms Jul 18 04 1 1s404ms 1s404ms 05 3 4s228ms 1s409ms 09 1 1s417ms 1s417ms 11 1 1s465ms 1s465ms 15 1 1s367ms 1s367ms 18 1 1s402ms 1s402ms 19 1 1s370ms 1s370ms 21 1 1s414ms 1s414ms Jul 19 01 1 1s380ms 1s380ms 05 6 8s411ms 1s401ms 09 2 2s785ms 1s392ms 22 1 1s391ms 1s391ms 23 1 1s393ms 1s393ms Jul 20 00 1 1s424ms 1s424ms 02 2 2s806ms 1s403ms 03 5 7s33ms 1s406ms 04 3 4s162ms 1s387ms 05 4 5s590ms 1s397ms 06 1 1s399ms 1s399ms 07 2 2s757ms 1s378ms 08 1 1s400ms 1s400ms 09 2 2s744ms 1s372ms 10 4 5s587ms 1s396ms 11 4 5s567ms 1s391ms 12 2 2s783ms 1s391ms 14 5 6s973ms 1s394ms 15 11 15s292ms 1s390ms 16 2 2s792ms 1s396ms 17 5 6s998ms 1s399ms 18 4 5s704ms 1s426ms 20 1 1s379ms 1s379ms 21 6 8s423ms 1s403ms 22 2 2s856ms 1s428ms 23 1 1s382ms 1s382ms [ User: pubeu - Total duration: 1m18s - Times executed: 56 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-17 08:10:07 Duration: 1s532ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-17 07:46:19 Duration: 1s531ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-20 18:54:54 Duration: 1s503ms Bind query: yes
9 127 2m51s 1s332ms 1s455ms 1s347ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 14 05 2 2s718ms 1s359ms 06 1 1s348ms 1s348ms 10 1 1s346ms 1s346ms 14 1 1s349ms 1s349ms 18 1 1s349ms 1s349ms 22 1 1s345ms 1s345ms Jul 15 05 2 2s686ms 1s343ms 15 1 1s349ms 1s349ms 18 1 1s345ms 1s345ms 19 1 1s364ms 1s364ms Jul 16 02 1 1s345ms 1s345ms 03 1 1s345ms 1s345ms 05 2 2s694ms 1s347ms 06 1 1s355ms 1s355ms 08 1 1s357ms 1s357ms 11 1 1s350ms 1s350ms 22 2 2s695ms 1s347ms Jul 17 01 1 1s338ms 1s338ms 02 1 1s350ms 1s350ms 05 2 2s674ms 1s337ms 07 1 1s340ms 1s340ms 08 2 2s685ms 1s342ms 11 1 1s350ms 1s350ms 13 1 1s346ms 1s346ms 18 1 1s332ms 1s332ms 19 1 1s345ms 1s345ms 22 1 1s347ms 1s347ms Jul 18 02 1 1s344ms 1s344ms 05 3 4s36ms 1s345ms 12 1 1s344ms 1s344ms 14 1 1s342ms 1s342ms 22 1 1s340ms 1s340ms Jul 19 03 1 1s346ms 1s346ms 05 2 2s686ms 1s343ms 06 1 1s345ms 1s345ms 14 1 1s348ms 1s348ms 18 1 1s346ms 1s346ms Jul 20 02 5 6s718ms 1s343ms 03 15 20s207ms 1s347ms 04 6 8s84ms 1s347ms 05 6 8s106ms 1s351ms 06 9 12s111ms 1s345ms 07 2 2s694ms 1s347ms 08 2 2s693ms 1s346ms 09 2 2s706ms 1s353ms 10 4 5s490ms 1s372ms 11 3 4s66ms 1s355ms 12 2 2s708ms 1s354ms 14 4 5s410ms 1s352ms 15 3 4s20ms 1s340ms 16 5 6s725ms 1s345ms 17 11 14s747ms 1s340ms 18 2 2s706ms 1s353ms [ User: pubeu - Total duration: 56s674ms - Times executed: 42 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-20 10:01:23 Duration: 1s455ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-20 05:38:35 Duration: 1s373ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-20 14:43:20 Duration: 1s372ms Bind query: yes
10 119 3m50s 1s897ms 1s991ms 1s934ms select distinct phenotypeterm.nm as gonm, phenotypeterm.nm_html as gonmhtml, phenotypeterm.acc_txt as goacc, diseaseterm.nm as diseasenm, diseaseterm.nm_html as diseasenmhtml, diseaseterm.acc_txt as diseaseacc, diseaseterm.acc_db_cd as diseaseaccdbcd, chemterm.nm as chemnm, chemterm.nm_html as chemnmhtml, chemterm.acc_txt as chemacc, geneterm.nm as genesymbol, geneterm.nm_html as genesymbolhtml, geneterm.acc_txt as geneacc, count(*) over () fullrowcount from phenotype_term_reference viachemptr, phenotype_term_reference viageneptr, term phenotypeterm, term diseaseterm, term geneterm, term chemterm where diseaseterm.id = any (array ( select baseterm.id from term baseterm where baseterm.object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) and viachemptr.phenotype_id = phenotypeterm.id and viachemptr.term_object_type_id = ? and viachemptr.term_id = diseaseterm.id and viachemptr.via_term_object_type_id = ? and viachemptr.via_term_id = chemterm.id and viachemptr.term_id = viageneptr.term_id and viachemptr.phenotype_id = viageneptr.phenotype_id and viageneptr.via_term_object_type_id = ? and viageneptr.via_term_id = geneterm.id and exists ( select ? from gene_chem_reference where gene_id = geneterm.id and chem_id = chemterm.id) group by phenotypeterm.nm, phenotypeterm.nm_html, phenotypeterm.acc_txt, diseaseterm.nm, diseaseterm.nm_html, diseaseterm.acc_txt, diseaseterm.acc_db_cd, chemterm.nm, chemterm.nm_html, chemterm.acc_txt, geneterm.nm, geneterm.nm_html, geneterm.acc_txt order by geneterm.nm limit ? offset ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 16 10 15 28s961ms 1s930ms 21 2 3s904ms 1s952ms 23 1 1s917ms 1s917ms Jul 17 01 1 1s941ms 1s941ms 02 40 1m17s 1s930ms 03 34 1m6s 1s943ms 04 21 40s482ms 1s927ms 08 5 9s726ms 1s945ms [ User: pubeu - Total duration: 34s918ms - Times executed: 18 ]
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where diseaseTerm.id = ANY (ARRAY ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 3 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ASTHMA' AND tl.object_type_id = 3))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by geneTerm.nm LIMIT 50 OFFSET 8600;
Date: 2024-07-17 03:49:58 Duration: 1s991ms Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where diseaseTerm.id = ANY (ARRAY ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 3 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ASTHMA' AND tl.object_type_id = 3))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by geneTerm.nm LIMIT 50 OFFSET 4850;
Date: 2024-07-17 02:26:46 Duration: 1s989ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct phenotypeTerm.nm AS goNm, phenotypeTerm.nm_html AS goNmHtml, phenotypeTerm.acc_txt AS goAcc, diseaseTerm.nm AS diseaseNm, diseaseTerm.nm_html AS diseaseNmHtml, diseaseTerm.acc_txt AS diseaseAcc, diseaseTerm.acc_db_cd AS diseaseAccDbCd, chemTerm.nm AS chemNm, chemTerm.nm_html AS chemNmHtml, chemTerm.acc_txt AS chemAcc, geneTerm.nm AS geneSymbol, geneTerm.nm_html AS geneSymbolHtml, geneTerm.acc_txt AS geneAcc, COUNT(*) OVER () fullRowCount from PHENOTYPE_TERM_REFERENCE viaChemPTR, PHENOTYPE_TERM_REFERENCE viaGenePTR, TERM phenotypeTerm, TERM diseaseTerm, TERM geneTerm, TERM chemTerm where diseaseTerm.id = ANY (ARRAY ( select baseTerm.id from term baseTerm WHERE baseTerm.object_type_id = 3 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = 'ASTHMA' AND tl.object_type_id = 3))) and viaChemPTR.phenotype_id = phenotypeTerm.id and viaChemPTR.term_object_type_id = 3 and viaChemPTR.term_id = diseaseTerm.id and viaChemPTR.via_term_object_type_id = 2 and viaChemPTR.via_term_id = chemTerm.id and viaChemPTR.term_id = viaGenePTR.term_id and viaChemPTR.phenotype_id = viaGenePTR.phenotype_id and viaGenePTR.via_term_object_type_id = 4 and viaGenePTR.via_term_id = geneTerm.id and exists ( select 1 from gene_chem_reference where gene_id = geneTerm.id and chem_id = chemTerm.id) GROUP BY phenotypeTerm.nm, phenotypeTerm.nm_html, phenotypeTerm.acc_txt, diseaseTerm.nm, diseaseTerm.nm_html, diseaseTerm.acc_txt, diseaseTerm.acc_db_cd, chemTerm.nm, chemTerm.nm_html, chemTerm.acc_txt, geneTerm.nm, geneTerm.nm_html, geneTerm.acc_txt order by geneTerm.nm LIMIT 50 OFFSET 6150;
Date: 2024-07-17 03:29:33 Duration: 1s983ms Bind query: yes
11 109 13m45s 1s31ms 23s347ms 7s577ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 15 01 1 19s551ms 19s551ms 02 1 18s993ms 18s993ms 07 1 1s605ms 1s605ms 09 1 1s370ms 1s370ms Jul 18 12 1 6s521ms 6s521ms Jul 19 02 1 1s919ms 1s919ms 23 1 1s656ms 1s656ms Jul 20 00 4 16s555ms 4s138ms 03 4 50s225ms 12s556ms 04 4 28s835ms 7s208ms 05 4 26s757ms 6s689ms 06 3 12s28ms 4s9ms 07 11 1m42s 9s352ms 08 5 50s323ms 10s64ms 09 2 6s52ms 3s26ms 10 9 1m40s 11s126ms 11 2 6s784ms 3s392ms 12 1 3s476ms 3s476ms 14 14 1m20s 5s741ms 15 5 34s129ms 6s825ms 16 7 57s382ms 8s197ms 17 4 28s595ms 7s148ms 18 6 39s323ms 6s553ms 19 3 12s619ms 4s206ms 20 3 23s407ms 7s802ms 21 3 32s103ms 10s701ms 22 7 43s552ms 6s221ms 23 1 18s742ms 18s742ms [ User: pubeu - Total duration: 2m47s - Times executed: 27 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 21:58:23 Duration: 23s347ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 20:13:14 Duration: 20s960ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:01:39 Duration: 20s719ms Database: ctdprd51 User: pubeu Bind query: yes
12 101 4m38s 1s8ms 3s491ms 2s760ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 14 05 4 8s681ms 2s170ms 09 1 1s905ms 1s905ms 19 1 3s196ms 3s196ms 20 3 9s772ms 3s257ms Jul 15 05 4 8s701ms 2s175ms 18 1 3s263ms 3s263ms Jul 16 05 4 8s750ms 2s187ms 13 1 3s241ms 3s241ms Jul 17 05 4 8s701ms 2s175ms 07 2 4s583ms 2s291ms 08 2 4s481ms 2s240ms 13 1 1s898ms 1s898ms Jul 18 05 4 8s791ms 2s197ms Jul 19 03 1 1s828ms 1s828ms 05 4 8s705ms 2s176ms 22 1 1s901ms 1s901ms Jul 20 00 1 3s262ms 3s262ms 01 1 3s226ms 3s226ms 02 1 3s181ms 3s181ms 03 6 19s573ms 3s262ms 04 4 12s976ms 3s244ms 05 8 21s183ms 2s647ms 06 4 12s983ms 3s245ms 07 6 18s738ms 3s123ms 08 2 6s497ms 3s248ms 09 2 6s468ms 3s234ms 10 1 3s206ms 3s206ms 11 7 19s187ms 2s741ms 15 5 11s645ms 2s329ms 16 1 3s225ms 3s225ms 17 5 16s206ms 3s241ms 18 3 9s717ms 3s239ms 19 2 6s782ms 3s391ms 20 1 3s356ms 3s356ms 21 3 8s966ms 2s988ms [ User: pubeu - Total duration: 1m24s - Times executed: 27 ]
[ User: qaeu - Total duration: 23s407ms - Times executed: 7 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '650196' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2024-07-20 19:54:27 Duration: 3s491ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-17 07:46:02 Duration: 3s428ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-17 08:09:50 Duration: 3s397ms Database: ctdprd51 User: pubeu Bind query: yes
13 99 2m11s 1s201ms 1s708ms 1s327ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 14 04 1 1s328ms 1s328ms 05 2 2s872ms 1s436ms 10 2 2s550ms 1s275ms 13 1 1s322ms 1s322ms 17 1 1s335ms 1s335ms 18 2 2s542ms 1s271ms 21 1 1s385ms 1s385ms Jul 15 02 1 1s234ms 1s234ms 03 1 1s331ms 1s331ms 04 1 1s272ms 1s272ms 05 2 2s840ms 1s420ms 06 2 2s607ms 1s303ms 08 1 1s265ms 1s265ms 09 1 1s261ms 1s261ms 20 1 1s241ms 1s241ms Jul 16 01 1 1s345ms 1s345ms 05 2 2s869ms 1s434ms 11 1 1s254ms 1s254ms 12 1 1s237ms 1s237ms 13 1 1s319ms 1s319ms 16 2 2s570ms 1s285ms 19 1 1s289ms 1s289ms 20 1 1s284ms 1s284ms 23 1 1s349ms 1s349ms Jul 17 04 1 1s331ms 1s331ms 05 3 4s92ms 1s364ms 06 1 1s304ms 1s304ms 07 2 2s630ms 1s315ms 08 2 2s642ms 1s321ms 11 1 1s201ms 1s201ms 12 1 1s343ms 1s343ms 13 1 1s227ms 1s227ms 15 1 1s253ms 1s253ms 16 2 2s777ms 1s388ms Jul 18 01 1 1s260ms 1s260ms 05 2 2s813ms 1s406ms 07 1 1s267ms 1s267ms 10 1 1s344ms 1s344ms 12 1 1s236ms 1s236ms 14 1 1s328ms 1s328ms 15 1 1s310ms 1s310ms 22 1 1s323ms 1s323ms Jul 19 04 1 1s233ms 1s233ms 05 3 4s80ms 1s360ms 06 1 1s270ms 1s270ms 07 1 1s211ms 1s211ms 10 1 1s331ms 1s331ms 13 2 2s717ms 1s358ms 15 1 1s269ms 1s269ms 16 2 2s516ms 1s258ms 17 1 1s514ms 1s514ms 21 1 1s262ms 1s262ms 23 2 2s473ms 1s236ms Jul 20 00 1 1s209ms 1s209ms 02 2 2s466ms 1s233ms 04 1 1s218ms 1s218ms 05 2 2s786ms 1s393ms 07 4 5s248ms 1s312ms 08 1 1s310ms 1s310ms 10 3 4s290ms 1s430ms 12 3 4s297ms 1s432ms 13 1 1s651ms 1s651ms 14 1 1s531ms 1s531ms 15 2 2s599ms 1s299ms 17 3 3s824ms 1s274ms 19 3 4s110ms 1s370ms 22 1 1s377ms 1s377ms [ User: pubeu - Total duration: 1m8s - Times executed: 52 ]
[ User: qaeu - Total duration: 1s406ms - Times executed: 1 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2070257') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2070257') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-20 12:11:42 Duration: 1s708ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2074277') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2074277') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-20 13:23:25 Duration: 1s651ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2075512') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2075512') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-20 19:30:08 Duration: 1s630ms Bind query: yes
14 98 7h10m36s 1s235ms 18m46s 4m23s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 14 04 1 3m36s 3m36s 17 1 3m37s 3m37s Jul 15 02 1 3s63ms 3s63ms 04 1 3m36s 3m36s 07 1 1s558ms 1s558ms 09 1 2m30s 2m30s 18 1 3m36s 3m36s Jul 16 17 1 3m36s 3m36s Jul 17 04 1 3m39s 3m39s 17 1 3m37s 3m37s Jul 18 17 1 1s547ms 1s547ms Jul 19 06 1 1s666ms 1s666ms 11 1 1m37s 1m37s 13 1 2m27s 2m27s 23 1 1s505ms 1s505ms Jul 20 03 4 25m45s 6m26s 04 5 35m33s 7m6s 05 2 4s331ms 2s165ms 06 1 1s235ms 1s235ms 07 5 43m6s 8m37s 09 2 8m30s 4m15s 10 5 34m32s 6m54s 11 3 30m3s 10m1s 12 2 3s407ms 1s703ms 14 6 30m56s 5m9s 15 8 17m58s 2m14s 16 14 59m45s 4m16s 17 1 1s538ms 1s538ms 18 4 25m52s 6m28s 19 2 6s642ms 3s321ms 20 7 48m49s 6m58s 21 5 3m25s 41s155ms 22 7 33m49s 4m49s [ User: pubeu - Total duration: 2h7m34s - Times executed: 30 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 20:43:51 Duration: 18m46s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 04:47:18 Duration: 18m15s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 22:03:11 Duration: 18m15s Bind query: yes
15 97 2m10s 1s208ms 3s332ms 1s342ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 14 00 1 1s250ms 1s250ms 05 2 2s785ms 1s392ms 11 2 2s811ms 1s405ms 12 1 1s247ms 1s247ms 16 1 1s257ms 1s257ms 17 1 1s259ms 1s259ms 18 1 1s269ms 1s269ms 22 3 3s780ms 1s260ms Jul 15 00 1 1s349ms 1s349ms 01 1 1s363ms 1s363ms 02 1 1s289ms 1s289ms 05 2 2s750ms 1s375ms 15 1 1s293ms 1s293ms 17 1 1s278ms 1s278ms 21 1 1s244ms 1s244ms Jul 16 02 1 1s276ms 1s276ms 04 1 1s304ms 1s304ms 05 3 4s86ms 1s362ms 06 1 1s278ms 1s278ms 11 1 1s261ms 1s261ms 12 1 1s221ms 1s221ms 14 1 1s274ms 1s274ms 17 1 1s244ms 1s244ms Jul 17 01 1 1s317ms 1s317ms 02 1 1s233ms 1s233ms 03 1 1s322ms 1s322ms 04 4 5s170ms 1s292ms 05 4 5s267ms 1s316ms 07 2 2s613ms 1s306ms 08 1 1s360ms 1s360ms 11 1 1s470ms 1s470ms 12 1 1s315ms 1s315ms 13 1 1s360ms 1s360ms 15 1 1s268ms 1s268ms 16 1 1s318ms 1s318ms Jul 18 04 1 1s277ms 1s277ms 05 2 2s712ms 1s356ms 11 2 2s485ms 1s242ms 13 1 1s257ms 1s257ms 14 1 1s208ms 1s208ms 15 1 1s241ms 1s241ms 17 1 1s254ms 1s254ms 19 1 1s504ms 1s504ms 20 1 1s233ms 1s233ms Jul 19 02 1 1s272ms 1s272ms 03 1 1s311ms 1s311ms 05 3 3s995ms 1s331ms 07 1 1s258ms 1s258ms 08 1 1s227ms 1s227ms 09 3 3s733ms 1s244ms 11 1 1s248ms 1s248ms 17 1 1s296ms 1s296ms 18 1 1s259ms 1s259ms 19 1 1s270ms 1s270ms 23 3 3s797ms 1s265ms Jul 20 01 1 1s220ms 1s220ms 03 2 2s479ms 1s239ms 04 1 1s259ms 1s259ms 05 2 2s675ms 1s337ms 06 2 4s559ms 2s279ms 07 1 1s487ms 1s487ms 09 1 1s238ms 1s238ms 10 1 1s274ms 1s274ms 16 2 2s569ms 1s284ms 17 1 1s329ms 1s329ms 18 2 2s812ms 1s406ms 19 3 3s935ms 1s311ms 21 1 3s332ms 3s332ms [ User: pubeu - Total duration: 1m2s - Times executed: 47 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1211539') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1211539') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-20 21:51:57 Duration: 3s332ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1211539') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1211539') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-20 06:17:42 Duration: 3s213ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-14 11:32:13 Duration: 1s545ms Database: ctdprd51 User: pubeu Bind query: yes
16 74 2m1s 1s229ms 1s871ms 1s642ms select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 17 04 1 1s845ms 1s845ms 10 1 1s261ms 1s261ms Jul 19 21 1 1s805ms 1s805ms Jul 20 00 1 1s818ms 1s818ms 02 1 1s250ms 1s250ms 03 3 4s804ms 1s601ms 04 3 5s488ms 1s829ms 05 2 3s604ms 1s802ms 06 5 8s513ms 1s702ms 07 6 10s345ms 1s724ms 08 1 1s800ms 1s800ms 09 5 7s970ms 1s594ms 10 9 14s154ms 1s572ms 11 4 6s663ms 1s665ms 12 1 1s253ms 1s253ms 13 5 7s348ms 1s469ms 14 3 5s502ms 1s834ms 15 3 5s462ms 1s820ms 16 2 3s657ms 1s828ms 17 4 6s671ms 1s667ms 18 2 3s65ms 1s532ms 19 3 4s303ms 1s434ms 20 1 1s820ms 1s820ms 21 4 5s604ms 1s401ms 22 3 5s494ms 1s831ms [ User: pubeu - Total duration: 36s155ms - Times executed: 21 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-20 15:20:27 Duration: 1s871ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-20 14:27:46 Duration: 1s868ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2024-07-20 09:19:36 Duration: 1s866ms Bind query: yes
17 68 6m56s 1s8ms 16s548ms 6s131ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 14 16 1 1s13ms 1s13ms Jul 15 01 2 32s909ms 16s454ms 02 1 15s281ms 15s281ms 07 1 2s445ms 2s445ms Jul 16 16 1 1s109ms 1s109ms Jul 17 12 1 1s8ms 1s8ms Jul 18 02 1 3s813ms 3s813ms 06 1 4s206ms 4s206ms 23 1 3s333ms 3s333ms Jul 19 03 1 1s42ms 1s42ms 16 1 5s502ms 5s502ms Jul 20 03 1 10s536ms 10s536ms 04 1 10s481ms 10s481ms 05 2 18s296ms 9s148ms 06 1 1s68ms 1s68ms 07 3 3s113ms 1s37ms 08 1 2s225ms 2s225ms 09 3 18s958ms 6s319ms 10 3 18s89ms 6s29ms 11 3 21s132ms 7s44ms 13 1 15s299ms 15s299ms 14 8 45s562ms 5s695ms 15 3 25s2ms 8s334ms 16 3 20s443ms 6s814ms 17 3 18s781ms 6s260ms 18 4 37s216ms 9s304ms 19 1 1s70ms 1s70ms 21 6 24s661ms 4s110ms 22 7 43s890ms 6s270ms 23 2 9s425ms 4s712ms [ User: pubeu - Total duration: 2m38s - Times executed: 27 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-15 01:23:54 Duration: 16s548ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-15 01:23:53 Duration: 16s360ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:52:12 Duration: 15s712ms Database: ctdprd51 User: pubeu Bind query: yes
18 64 1m39s 1s 2s356ms 1s551ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 18 02 1 1s544ms 1s544ms Jul 20 03 3 5s503ms 1s834ms 04 1 1s396ms 1s396ms 05 3 4s905ms 1s635ms 06 3 5s433ms 1s811ms 07 4 5s28ms 1s257ms 08 2 2s39ms 1s19ms 09 3 4s998ms 1s666ms 10 4 5s753ms 1s438ms 11 7 11s18ms 1s574ms 12 4 6s403ms 1s600ms 13 2 2s722ms 1s361ms 14 3 3s958ms 1s319ms 15 3 5s398ms 1s799ms 16 6 9s718ms 1s619ms 18 1 2s252ms 2s252ms 19 2 2s760ms 1s380ms 20 6 10s504ms 1s750ms 21 3 3s490ms 1s163ms 22 2 3s89ms 1s544ms 23 1 1s390ms 1s390ms [ User: pubeu - Total duration: 17s585ms - Times executed: 12 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2070257') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 11:13:31 Duration: 2s356ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2070257') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 12:20:39 Duration: 2s309ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2070257') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 20:07:10 Duration: 2s307ms Database: ctdprd51 User: pubeu Bind query: yes
19 54 2m5s 1s16ms 7s301ms 2s326ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.ixn_id = any (array (( select ixn_id from ixn_anatomy where anatomy_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 18 13 1 1s16ms 1s16ms Jul 19 23 3 3s862ms 1s287ms Jul 20 01 1 1s507ms 1s507ms 02 4 16s431ms 4s107ms 03 1 1s521ms 1s521ms 04 1 1s321ms 1s321ms 05 4 5s24ms 1s256ms 06 2 2s451ms 1s225ms 07 3 8s134ms 2s711ms 08 3 9s659ms 3s219ms 09 3 9s346ms 3s115ms 10 1 1s324ms 1s324ms 11 3 4s291ms 1s430ms 12 3 3s735ms 1s245ms 13 2 8s311ms 4s155ms 15 1 6s824ms 6s824ms 16 2 8s69ms 4s34ms 17 4 5s645ms 1s411ms 18 1 6s821ms 6s821ms 19 1 1s261ms 1s261ms 20 3 10s96ms 3s365ms 21 5 6s130ms 1s226ms 22 2 2s834ms 1s417ms [ User: pubeu - Total duration: 44s332ms - Times executed: 18 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087089')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 20:25:25 Duration: 7s301ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087089')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:17:39 Duration: 6s930ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2087089')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 02:38:39 Duration: 6s856ms Bind query: yes
20 48 11m6s 1s72ms 57s606ms 13s883ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 14 20 1 20s830ms 20s830ms Jul 15 13 1 2s919ms 2s919ms 23 1 42s924ms 42s924ms Jul 16 05 3 5s788ms 1s929ms 07 3 9s765ms 3s255ms 08 5 13s586ms 2s717ms 09 12 25s505ms 2s125ms Jul 17 06 5 2m59s 35s825ms 07 7 5m26s 46s623ms 09 1 1s413ms 1s413ms Jul 18 14 1 1s534ms 1s534ms Jul 19 01 1 1s597ms 1s597ms 02 2 2s169ms 1s84ms 08 1 1s406ms 1s406ms Jul 20 05 1 9s669ms 9s669ms 09 1 15s697ms 15s697ms 10 1 1s822ms 1s822ms 13 1 4s297ms 4s297ms [ User: pubeu - Total duration: 4m41s - Times executed: 26 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 07:49:42 Duration: 57s606ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 07:47:28 Duration: 45s922ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 06:07:36 Duration: 45s859ms Database: ctdprd51 User: pubeu Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 2h25m7s 2h35m19s 2h30m43s 3 7h32m11s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 15 17 2 4h56m52s 2h28m26s 18 1 2h35m19s 2h35m19s [ User: pubeu - Total duration: 4h56m52s - Times executed: 2 ]
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-15 18:12:56 Duration: 2h35m19s Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-15 17:35:42 Duration: 2h31m44s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'CARCINOMA, OVARIAN EPITHELIAL' AND t.object_type_id = 3))) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'activity')))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2024-07-15 17:17:55 Duration: 2h25m7s Database: ctdprd51 User: pubeu Bind query: yes
2 23m23s 23m23s 23m23s 1 23m23s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 20 19 1 23m23s 23m23s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-20 19:41:35 Duration: 23m23s
3 23m17s 23m17s 23m17s 1 23m17s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 20 19 1 23m17s 23m17s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-07-20 19:00:08 Duration: 23m17s
4 16m14s 16m23s 16m19s 7 1h54m13s select maint_query_logs_archive ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 14 00 1 16m16s 16m16s Jul 15 00 1 16m18s 16m18s Jul 16 00 1 16m18s 16m18s Jul 17 00 1 16m14s 16m14s Jul 18 00 1 16m20s 16m20s Jul 19 00 1 16m21s 16m21s Jul 20 00 1 16m23s 16m23s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-20 00:16:24 Duration: 16m23s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-19 00:16:22 Duration: 16m21s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-18 00:16:22 Duration: 16m20s
5 8m1s 8m1s 8m1s 1 8m1s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by phenotypeterm.nm_sort, diseaseterm.nm_sort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 20 05 1 8m1s 8m1s -
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1242915') and diseaseTerm.object_type_id = 3 ORDER BY phenotypeTerm.nm_sort, diseaseTerm.nm_sort LIMIT 50;
Date: 2024-07-20 05:22:50 Duration: 8m1s Bind query: yes
6 6m42s 6m42s 6m42s 1 6m42s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 20 19 1 6m42s 6m42s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-20 19:53:04 Duration: 6m42s
7 6m40s 6m40s 6m40s 1 6m40s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 20 19 1 6m40s 6m40s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2024-07-20 19:11:36 Duration: 6m40s
8 1s235ms 18m46s 4m23s 98 7h10m36s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 14 04 1 3m36s 3m36s 17 1 3m37s 3m37s Jul 15 02 1 3s63ms 3s63ms 04 1 3m36s 3m36s 07 1 1s558ms 1s558ms 09 1 2m30s 2m30s 18 1 3m36s 3m36s Jul 16 17 1 3m36s 3m36s Jul 17 04 1 3m39s 3m39s 17 1 3m37s 3m37s Jul 18 17 1 1s547ms 1s547ms Jul 19 06 1 1s666ms 1s666ms 11 1 1m37s 1m37s 13 1 2m27s 2m27s 23 1 1s505ms 1s505ms Jul 20 03 4 25m45s 6m26s 04 5 35m33s 7m6s 05 2 4s331ms 2s165ms 06 1 1s235ms 1s235ms 07 5 43m6s 8m37s 09 2 8m30s 4m15s 10 5 34m32s 6m54s 11 3 30m3s 10m1s 12 2 3s407ms 1s703ms 14 6 30m56s 5m9s 15 8 17m58s 2m14s 16 14 59m45s 4m16s 17 1 1s538ms 1s538ms 18 4 25m52s 6m28s 19 2 6s642ms 3s321ms 20 7 48m49s 6m58s 21 5 3m25s 41s155ms 22 7 33m49s 4m49s [ User: pubeu - Total duration: 2h7m34s - Times executed: 30 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 20:43:51 Duration: 18m46s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 04:47:18 Duration: 18m15s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-20 22:03:11 Duration: 18m15s Bind query: yes
9 7s301ms 8m7s 2m55s 3 8m47s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by diseaseterm.nm_sort, phenotypeterm.nm_sort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 16 00 1 32s814ms 32s814ms Jul 20 05 1 8m7s 8m7s 22 1 7s301ms 7s301ms [ User: pubeu - Total duration: 32s814ms - Times executed: 1 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1242915') and diseaseTerm.object_type_id = 3 ORDER BY diseaseTerm.nm_sort, phenotypeTerm.nm_sort LIMIT 50;
Date: 2024-07-20 05:38:05 Duration: 8m7s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1222830') and diseaseTerm.object_type_id = 3 ORDER BY diseaseTerm.nm_sort, phenotypeTerm.nm_sort LIMIT 50;
Date: 2024-07-16 00:59:00 Duration: 32s814ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1211539') and diseaseTerm.object_type_id = 3 ORDER BY diseaseTerm.nm_sort, phenotypeTerm.nm_sort LIMIT 50;
Date: 2024-07-20 22:19:10 Duration: 7s301ms Bind query: yes
10 32s611ms 33s388ms 33s204ms 25 13m50s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 14 06 1 33s273ms 33s273ms 10 1 33s257ms 33s257ms 14 1 33s291ms 33s291ms 18 1 33s244ms 33s244ms Jul 15 06 1 33s209ms 33s209ms 10 1 33s176ms 33s176ms 14 1 33s199ms 33s199ms 18 1 33s161ms 33s161ms Jul 16 06 1 33s156ms 33s156ms 10 1 33s388ms 33s388ms 14 1 33s246ms 33s246ms 18 1 33s182ms 33s182ms Jul 17 06 1 33s291ms 33s291ms 10 1 33s209ms 33s209ms 14 1 33s216ms 33s216ms 18 1 33s272ms 33s272ms Jul 18 06 1 33s205ms 33s205ms 10 1 33s176ms 33s176ms 14 1 33s241ms 33s241ms 18 1 33s215ms 33s215ms Jul 19 06 1 33s222ms 33s222ms 10 1 33s217ms 33s217ms 14 1 33s208ms 33s208ms 18 1 33s245ms 33s245ms Jul 20 19 1 32s611ms 32s611ms [ User: postgres - Total duration: 13m17s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m17s - Times executed: 24 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-16 10:05:35 Duration: 33s388ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-17 06:05:35 Duration: 33s291ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-14 14:05:35 Duration: 33s291ms Database: ctdprd51 User: postgres Application: pg_dump
11 1s933ms 1m12s 22s328ms 16 5m57s select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 16 18 1 42s832ms 42s832ms Jul 20 04 4 2m29s 37s457ms 05 1 2s200ms 2s200ms 06 1 2s241ms 2s241ms 12 1 32s166ms 32s166ms 16 1 2s659ms 2s659ms 17 3 1m23s 27s944ms 18 1 2s245ms 2s245ms 19 1 35s26ms 35s26ms 20 1 2s221ms 2s221ms 21 1 1s992ms 1s992ms [ User: pubeu - Total duration: 1m39s - Times executed: 5 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1428326')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-07-20 04:07:44 Duration: 1m12s Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1428326')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-07-20 04:50:49 Duration: 1m12s Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2071921')) ORDER BY r.sort_txt LIMIT 50;
Date: 2024-07-20 17:39:02 Duration: 49s866ms Database: ctdprd51 User: pubeu Bind query: yes
12 1s72ms 57s606ms 13s883ms 48 11m6s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 14 20 1 20s830ms 20s830ms Jul 15 13 1 2s919ms 2s919ms 23 1 42s924ms 42s924ms Jul 16 05 3 5s788ms 1s929ms 07 3 9s765ms 3s255ms 08 5 13s586ms 2s717ms 09 12 25s505ms 2s125ms Jul 17 06 5 2m59s 35s825ms 07 7 5m26s 46s623ms 09 1 1s413ms 1s413ms Jul 18 14 1 1s534ms 1s534ms Jul 19 01 1 1s597ms 1s597ms 02 2 2s169ms 1s84ms 08 1 1s406ms 1s406ms Jul 20 05 1 9s669ms 9s669ms 09 1 15s697ms 15s697ms 10 1 1s822ms 1s822ms 13 1 4s297ms 4s297ms [ User: pubeu - Total duration: 4m41s - Times executed: 26 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 07:49:42 Duration: 57s606ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 07:47:28 Duration: 45s922ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-07-17 06:07:36 Duration: 45s859ms Database: ctdprd51 User: pubeu Bind query: yes
13 1s31ms 23s347ms 7s577ms 109 13m45s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 15 01 1 19s551ms 19s551ms 02 1 18s993ms 18s993ms 07 1 1s605ms 1s605ms 09 1 1s370ms 1s370ms Jul 18 12 1 6s521ms 6s521ms Jul 19 02 1 1s919ms 1s919ms 23 1 1s656ms 1s656ms Jul 20 00 4 16s555ms 4s138ms 03 4 50s225ms 12s556ms 04 4 28s835ms 7s208ms 05 4 26s757ms 6s689ms 06 3 12s28ms 4s9ms 07 11 1m42s 9s352ms 08 5 50s323ms 10s64ms 09 2 6s52ms 3s26ms 10 9 1m40s 11s126ms 11 2 6s784ms 3s392ms 12 1 3s476ms 3s476ms 14 14 1m20s 5s741ms 15 5 34s129ms 6s825ms 16 7 57s382ms 8s197ms 17 4 28s595ms 7s148ms 18 6 39s323ms 6s553ms 19 3 12s619ms 4s206ms 20 3 23s407ms 7s802ms 21 3 32s103ms 10s701ms 22 7 43s552ms 6s221ms 23 1 18s742ms 18s742ms [ User: pubeu - Total duration: 2m47s - Times executed: 27 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 21:58:23 Duration: 23s347ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 20:13:14 Duration: 20s960ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1211539') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2024-07-20 16:01:39 Duration: 20s719ms Database: ctdprd51 User: pubeu Bind query: yes
14 1s8ms 16s548ms 6s131ms 68 6m56s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 14 16 1 1s13ms 1s13ms Jul 15 01 2 32s909ms 16s454ms 02 1 15s281ms 15s281ms 07 1 2s445ms 2s445ms Jul 16 16 1 1s109ms 1s109ms Jul 17 12 1 1s8ms 1s8ms Jul 18 02 1 3s813ms 3s813ms 06 1 4s206ms 4s206ms 23 1 3s333ms 3s333ms Jul 19 03 1 1s42ms 1s42ms 16 1 5s502ms 5s502ms Jul 20 03 1 10s536ms 10s536ms 04 1 10s481ms 10s481ms 05 2 18s296ms 9s148ms 06 1 1s68ms 1s68ms 07 3 3s113ms 1s37ms 08 1 2s225ms 2s225ms 09 3 18s958ms 6s319ms 10 3 18s89ms 6s29ms 11 3 21s132ms 7s44ms 13 1 15s299ms 15s299ms 14 8 45s562ms 5s695ms 15 3 25s2ms 8s334ms 16 3 20s443ms 6s814ms 17 3 18s781ms 6s260ms 18 4 37s216ms 9s304ms 19 1 1s70ms 1s70ms 21 6 24s661ms 4s110ms 22 7 43s890ms 6s270ms 23 2 9s425ms 4s712ms [ User: pubeu - Total duration: 2m38s - Times executed: 27 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-15 01:23:54 Duration: 16s548ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-15 01:23:53 Duration: 16s360ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1211539'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:52:12 Duration: 15s712ms Database: ctdprd51 User: pubeu Bind query: yes
15 1s2ms 6s134ms 4s468ms 204 15m11s select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 14 02 1 5s264ms 5s264ms 03 1 5s166ms 5s166ms 10 1 1s18ms 1s18ms 14 1 1s39ms 1s39ms 18 1 1s11ms 1s11ms Jul 15 01 1 5s21ms 5s21ms 04 2 6s275ms 3s137ms 11 1 5s16ms 5s16ms 14 1 5s751ms 5s751ms 17 2 11s951ms 5s975ms 23 2 6s250ms 3s125ms Jul 16 02 4 21s241ms 5s310ms 03 1 1s2ms 1s2ms 04 3 15s446ms 5s148ms 07 2 10s140ms 5s70ms 09 1 5s277ms 5s277ms 12 1 5s267ms 5s267ms 13 1 5s54ms 5s54ms 14 1 1s11ms 1s11ms 16 1 5s555ms 5s555ms 22 1 5s103ms 5s103ms Jul 17 00 1 5s258ms 5s258ms 03 4 21s367ms 5s341ms 07 1 5s498ms 5s498ms 22 1 5s137ms 5s137ms Jul 18 00 1 5s171ms 5s171ms 01 1 5s15ms 5s15ms 05 1 1s15ms 1s15ms 14 1 5s158ms 5s158ms 19 3 15s751ms 5s250ms 20 3 15s903ms 5s301ms 22 4 20s991ms 5s247ms Jul 19 01 1 5s157ms 5s157ms 02 3 15s670ms 5s223ms 04 2 10s312ms 5s156ms 05 1 5s111ms 5s111ms 07 1 5s109ms 5s109ms 08 1 5s514ms 5s514ms 10 3 16s356ms 5s452ms 13 3 15s650ms 5s216ms 15 1 5s299ms 5s299ms 16 1 5s76ms 5s76ms 17 2 10s309ms 5s154ms Jul 20 00 1 5s560ms 5s560ms 02 1 1s11ms 1s11ms 03 2 10s730ms 5s365ms 04 5 21s813ms 4s362ms 05 5 17s701ms 3s540ms 06 11 50s658ms 4s605ms 07 3 11s504ms 3s834ms 08 16 50s645ms 3s165ms 09 17 1m9s 4s78ms 10 16 1m12s 4s539ms 11 8 34s539ms 4s317ms 12 4 20s962ms 5s240ms 13 3 16s70ms 5s356ms 14 3 15s497ms 5s165ms 15 6 27s755ms 4s625ms 16 1 5s299ms 5s299ms 17 7 28s599ms 4s85ms 18 5 22s372ms 4s474ms 19 4 17s327ms 4s331ms 20 2 10s453ms 5s226ms 21 9 48s918ms 5s435ms 22 1 1s127ms 1s127ms 23 4 16s395ms 4s98ms [ User: pubeu - Total duration: 5m40s - Times executed: 71 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1373913' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-15 17:13:43 Duration: 6s134ms Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1397490' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-20 21:51:13 Duration: 6s18ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1291824' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-15 17:20:32 Duration: 5s816ms Bind query: yes
16 3s873ms 6s253ms 4s52ms 412 27m49s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 14 01 7 27s845ms 3s977ms 02 3 11s950ms 3s983ms 03 1 4s127ms 4s127ms 05 4 16s831ms 4s207ms 06 4 15s855ms 3s963ms 07 1 4s154ms 4s154ms 09 2 8s51ms 4s25ms 10 6 24s177ms 4s29ms 11 3 11s740ms 3s913ms 14 2 7s834ms 3s917ms 15 1 3s964ms 3s964ms 16 1 3s931ms 3s931ms 18 4 15s776ms 3s944ms Jul 15 01 1 3s927ms 3s927ms 03 2 7s823ms 3s911ms 04 6 23s984ms 3s997ms 05 3 11s833ms 3s944ms 06 2 7s822ms 3s911ms 07 1 3s932ms 3s932ms 08 1 3s944ms 3s944ms 09 2 7s896ms 3s948ms 10 2 7s847ms 3s923ms 11 2 8s91ms 4s45ms 12 1 3s892ms 3s892ms 13 5 19s749ms 3s949ms 14 2 7s826ms 3s913ms 16 17 1m12s 4s253ms 17 73 5m1s 4s125ms 20 1 3s909ms 3s909ms 22 2 7s914ms 3s957ms 23 13 54s296ms 4s176ms Jul 16 00 1 3s934ms 3s934ms 01 1 3s979ms 3s979ms 02 1 4s293ms 4s293ms 03 5 19s716ms 3s943ms 04 4 15s788ms 3s947ms 05 1 3s961ms 3s961ms 06 1 3s964ms 3s964ms 07 1 4s27ms 4s27ms 08 4 15s834ms 3s958ms 10 2 7s997ms 3s998ms 11 2 7s912ms 3s956ms 12 1 3s970ms 3s970ms 13 3 12s35ms 4s11ms 14 6 24s183ms 4s30ms 15 1 3s950ms 3s950ms 16 3 14s786ms 4s928ms 18 3 11s841ms 3s947ms 19 48 3m13s 4s40ms 20 1 3s968ms 3s968ms 22 6 23s701ms 3s950ms 23 5 21s617ms 4s323ms Jul 17 02 12 47s106ms 3s925ms 03 4 16s175ms 4s43ms 04 3 11s817ms 3s939ms 05 5 19s756ms 3s951ms 06 1 4s53ms 4s53ms 08 1 4s10ms 4s10ms 10 5 22s122ms 4s424ms 11 3 11s871ms 3s957ms 12 3 11s891ms 3s963ms 14 2 7s815ms 3s907ms 15 2 8s115ms 4s57ms 16 2 7s923ms 3s961ms 21 4 15s807ms 3s951ms 22 1 3s902ms 3s902ms 23 2 8s16ms 4s8ms Jul 18 01 3 11s799ms 3s933ms 02 1 3s939ms 3s939ms 03 3 12s390ms 4s130ms 06 1 3s934ms 3s934ms 08 3 11s806ms 3s935ms 09 1 3s894ms 3s894ms 10 4 16s919ms 4s229ms 11 8 31s556ms 3s944ms 12 4 15s691ms 3s922ms 13 4 16s44ms 4s11ms 14 2 7s978ms 3s989ms 15 2 8s82ms 4s41ms 16 2 7s874ms 3s937ms 17 1 3s994ms 3s994ms 19 1 4s1ms 4s1ms 23 1 3s910ms 3s910ms Jul 19 00 3 11s754ms 3s918ms 01 1 3s922ms 3s922ms 02 4 17s430ms 4s357ms 04 2 7s899ms 3s949ms 05 1 3s976ms 3s976ms 06 4 16s45ms 4s11ms 07 1 3s972ms 3s972ms 08 2 8s286ms 4s143ms 09 1 3s917ms 3s917ms 10 2 8s10ms 4s5ms 11 2 7s940ms 3s970ms 13 2 8s266ms 4s133ms 14 1 3s975ms 3s975ms 15 2 7s909ms 3s954ms 22 1 3s908ms 3s908ms Jul 20 02 1 3s993ms 3s993ms 07 1 4s10ms 4s10ms 08 2 8s62ms 4s31ms 09 1 4s137ms 4s137ms 10 1 3s969ms 3s969ms 12 2 7s950ms 3s975ms 13 8 32s464ms 4s58ms 14 1 3s985ms 3s985ms [ User: pubeu - Total duration: 13m29s - Times executed: 201 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1256849') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1256849') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-17 10:48:05 Duration: 6s253ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-16 16:58:00 Duration: 5s489ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1334760') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1334760') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-16 16:12:46 Duration: 5s304ms Database: ctdprd51 User: pubeu Bind query: yes
17 1s177ms 6s416ms 3s84ms 199 10m13s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 15 05 1 5s939ms 5s939ms Jul 17 04 2 8s707ms 4s353ms 05 1 1s846ms 1s846ms Jul 19 21 4 12s739ms 3s184ms 23 1 1s725ms 1s725ms Jul 20 00 4 13s930ms 3s482ms 02 7 21s396ms 3s56ms 03 8 25s539ms 3s192ms 04 4 15s642ms 3s910ms 05 9 27s442ms 3s49ms 06 15 44s680ms 2s978ms 07 14 42s555ms 3s39ms 08 16 43s504ms 2s719ms 09 19 1m2s 3s299ms 10 24 1m14s 3s101ms 11 12 35s135ms 2s927ms 12 4 15s641ms 3s910ms 13 6 19s469ms 3s244ms 14 14 39s971ms 2s855ms 15 8 28s680ms 3s585ms 16 6 14s690ms 2s448ms 17 4 19s762ms 4s940ms 18 2 6s472ms 3s236ms 20 2 5s468ms 2s734ms 21 9 15s376ms 1s708ms 22 3 10s466ms 3s488ms [ User: pubeu - Total duration: 1m57s - Times executed: 39 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 22:06:04 Duration: 6s416ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 09:32:42 Duration: 6s197ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2024-07-20 02:54:42 Duration: 6s186ms Bind query: yes
18 1s3ms 11s104ms 2s952ms 273 13m26s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 14 04 2 3s642ms 1s821ms 10 2 11s304ms 5s652ms Jul 15 00 1 2s179ms 2s179ms 04 2 3s632ms 1s816ms 10 1 1s72ms 1s72ms 13 1 1s68ms 1s68ms 17 1 2s886ms 2s886ms 20 1 2s425ms 2s425ms 21 1 1s34ms 1s34ms 23 1 2s87ms 2s87ms Jul 16 04 1 2s564ms 2s564ms 07 2 2s335ms 1s167ms 08 2 2s799ms 1s399ms 10 1 1s190ms 1s190ms 11 1 2s486ms 2s486ms 15 1 2s407ms 2s407ms 21 4 11s793ms 2s948ms Jul 17 00 1 2s390ms 2s390ms 02 2 4s918ms 2s459ms 04 1 1s174ms 1s174ms 05 2 5s998ms 2s999ms 06 2 3s225ms 1s612ms 07 1 2s104ms 2s104ms 08 1 2s116ms 2s116ms 09 1 1s51ms 1s51ms 13 1 5s52ms 5s52ms 17 1 6s740ms 6s740ms Jul 18 00 1 3s12ms 3s12ms 01 1 1s343ms 1s343ms 02 1 2s125ms 2s125ms 04 1 2s561ms 2s561ms 07 1 1s116ms 1s116ms 11 1 1s61ms 1s61ms 12 2 2s926ms 1s463ms 19 1 1s191ms 1s191ms 23 1 1s180ms 1s180ms Jul 19 04 1 2s389ms 2s389ms 11 1 1s91ms 1s91ms 14 1 3s903ms 3s903ms 19 1 2s262ms 2s262ms 23 3 9s11ms 3s3ms Jul 20 00 1 1s7ms 1s7ms 02 3 8s509ms 2s836ms 03 9 29s462ms 3s273ms 04 6 16s972ms 2s828ms 05 5 16s3ms 3s200ms 06 17 57s520ms 3s383ms 07 7 21s689ms 3s98ms 08 6 16s201ms 2s700ms 09 13 40s944ms 3s149ms 10 11 39s706ms 3s609ms 11 28 1m26s 3s103ms 12 14 43s69ms 3s76ms 13 8 23s588ms 2s948ms 14 6 18s110ms 3s18ms 15 10 28s967ms 2s896ms 16 17 1m 3s574ms 17 5 9s471ms 1s894ms 18 4 11s717ms 2s929ms 19 15 42s994ms 2s866ms 20 12 32s682ms 2s723ms 21 12 40s336ms 3s361ms 22 7 27s83ms 3s869ms 23 2 5s514ms 2s757ms [ User: pubeu - Total duration: 3m57s - Times executed: 89 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080559') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 06:25:06 Duration: 11s104ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2080559') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 16:58:05 Duration: 11s73ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073988') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-20 10:58:35 Duration: 8s173ms Bind query: yes
19 1s8ms 3s491ms 2s760ms 101 4m38s with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 14 05 4 8s681ms 2s170ms 09 1 1s905ms 1s905ms 19 1 3s196ms 3s196ms 20 3 9s772ms 3s257ms Jul 15 05 4 8s701ms 2s175ms 18 1 3s263ms 3s263ms Jul 16 05 4 8s750ms 2s187ms 13 1 3s241ms 3s241ms Jul 17 05 4 8s701ms 2s175ms 07 2 4s583ms 2s291ms 08 2 4s481ms 2s240ms 13 1 1s898ms 1s898ms Jul 18 05 4 8s791ms 2s197ms Jul 19 03 1 1s828ms 1s828ms 05 4 8s705ms 2s176ms 22 1 1s901ms 1s901ms Jul 20 00 1 3s262ms 3s262ms 01 1 3s226ms 3s226ms 02 1 3s181ms 3s181ms 03 6 19s573ms 3s262ms 04 4 12s976ms 3s244ms 05 8 21s183ms 2s647ms 06 4 12s983ms 3s245ms 07 6 18s738ms 3s123ms 08 2 6s497ms 3s248ms 09 2 6s468ms 3s234ms 10 1 3s206ms 3s206ms 11 7 19s187ms 2s741ms 15 5 11s645ms 2s329ms 16 1 3s225ms 3s225ms 17 5 16s206ms 3s241ms 18 3 9s717ms 3s239ms 19 2 6s782ms 3s391ms 20 1 3s356ms 3s356ms 21 3 8s966ms 2s988ms [ User: pubeu - Total duration: 1m24s - Times executed: 27 ]
[ User: qaeu - Total duration: 23s407ms - Times executed: 7 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '650196' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2024-07-20 19:54:27 Duration: 3s491ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-17 07:46:02 Duration: 3s428ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-17 08:09:50 Duration: 3s397ms Database: ctdprd51 User: pubeu Bind query: yes
20 1s23ms 5s449ms 2s724ms 289 13m7s select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 14 10 2 7s493ms 3s746ms 20 1 3s799ms 3s799ms Jul 15 05 1 1s601ms 1s601ms 11 1 1s31ms 1s31ms Jul 17 04 2 3s602ms 1s801ms 05 2 3s94ms 1s547ms Jul 19 04 2 2s148ms 1s74ms 08 1 1s70ms 1s70ms 13 2 2s508ms 1s254ms 21 6 16s739ms 2s789ms 23 2 2s383ms 1s191ms Jul 20 00 8 22s569ms 2s821ms 01 1 5s50ms 5s50ms 02 5 9s461ms 1s892ms 03 5 17s703ms 3s540ms 04 9 20s808ms 2s312ms 05 7 19s684ms 2s812ms 06 26 1m3s 2s436ms 07 14 51s195ms 3s656ms 08 25 1m6s 2s655ms 09 17 53s59ms 3s121ms 10 25 1m5s 2s603ms 11 13 37s112ms 2s854ms 12 11 34s693ms 3s153ms 13 10 20s832ms 2s83ms 14 20 55s993ms 2s799ms 15 6 21s191ms 3s531ms 16 12 34s792ms 2s899ms 17 10 27s297ms 2s729ms 18 10 24s634ms 2s463ms 19 10 24s948ms 2s494ms 20 7 14s18ms 2s2ms 21 5 17s12ms 3s402ms 22 10 29s776ms 2s977ms 23 1 5s264ms 5s264ms [ User: pubeu - Total duration: 2m49s - Times executed: 62 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 08:56:16 Duration: 5s449ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 09:57:53 Duration: 5s404ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1388675') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2024-07-20 19:08:51 Duration: 5s362ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 54 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Jul 15 06 4 0ms 0ms 10 2 0ms 0ms 11 2 0ms 0ms Jul 16 07 2 0ms 0ms 13 2 0ms 0ms 16 2 0ms 0ms Jul 17 06 2 0ms 0ms 07 4 0ms 0ms 09 4 0ms 0ms 10 2 0ms 0ms 12 2 0ms 0ms 13 2 0ms 0ms 14 2 0ms 0ms 16 2 0ms 0ms 17 2 0ms 0ms Jul 18 07 2 0ms 0ms 09 4 0ms 0ms 15 2 0ms 0ms Jul 19 14 3 0ms 0ms 15 3 0ms 0ms 17 3 0ms 0ms Jul 21 00 1 0ms 0ms [ User: pubeu - Total duration: 2m8s - Times executed: 47 ]
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;
Date: Duration: 0ms Database: postgres User: ctdprd51 Remote: pubeu parameters: $1 = '2071531', $2 = '2071531'
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Events
Log levels
Key values
- 86,541 Log entries
Events distribution
Key values
- 0 PANIC entries
- 25 FATAL entries
- 25 ERROR entries
- 0 WARNING entries
Most Frequent Errors/Events
Key values
- 22 Max number of times the same event was reported
- 50 Total events found
Rank Times reported Error 1 22 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #1
Day Hour Count Jul 15 17 2 18 1 Jul 17 08 2 Jul 20 03 1 04 2 05 1 07 2 10 2 11 1 14 1 16 3 18 1 20 2 22 1 - FATAL: connection to client lost
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2024-07-17 08:09:45
2 20 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #2
Day Hour Count Jul 15 17 2 18 1 Jul 20 03 1 04 2 05 1 07 2 10 2 11 1 14 1 16 3 18 1 20 2 22 1 3 3 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #3
Day Hour Count Jul 17 08 3 - ERROR: could not send data to client: Connection reset by peer
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2024-07-17 08:09:45 Database: ctdprd51 Application: User: pubeu Remote:
4 2 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #4
Day Hour Count Jul 19 13 1 Jul 20 06 1 - ERROR: syntax error in ts"(WIN 55,212-2 | WIN 55,2122)"
- ERROR: syntax error in ts"プロプラノロール 結合"
Statement: SELECT /* MeshBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 2 AND l.object_type_id = 2 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 2 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 2 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2024-07-19 13:50:11
Statement: SELECT /* BasicCountsDAO gen */ ii.cd ,COUNT(ii.id) cnt FROM (SELECT ot.cd ,tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops',$1) UNION SELECT 'reference' ,r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english',$2) OR r.id IN (SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $3 ) ) UNION SELECT ot.cd ,l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper( l.acc_txt ) LIKE $4 ) ) ii GROUP BY ii.cd
Date: 2024-07-20 06:49:19 Database: ctdprd51 Application: User: pubeu Remote:
5 2 FATAL: canceling authentication due to timeout
Times Reported Most Frequent Error / Event #5
Day Hour Count Jul 17 07 2 6 1 FATAL: connection to client lost d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Times Reported Most Frequent Error / Event #6
Day Hour Count Jul 17 08 1 - FATAL: connection to client lost d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2024-07-17 08:09:45