pgBadger-
Global information
- Generated on Sun Aug 4 04:15:14 2024
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20240803
- Parsed 360,220 log entries in 13s
- Log start from 2024-07-28 00:00:01 to 2024-08-03 23:59:10
-
Overview
Global Stats
- 514 Number of unique normalized queries
- 6,469 Number of queries
- 2d6h29m11s Total query duration
- 2024-07-28 00:16:21 First query
- 2024-08-03 23:37:45 Last query
- 8 queries/s at 2024-07-31 16:28:47 Query peak
- 2d6h29m11s Total query duration
- 0ms Prepare/parse total duration
- 2s908ms Bind total duration
- 2d6h29m8s Execute total duration
- 1,355 Number of events
- 16 Number of unique normalized events
- 1,039 Max number of times the same event was reported
- 0 Number of cancellation
- 137 Total number of automatic vacuums
- 269 Total number of automatic analyzes
- 2,897 Number temporary file
- 1.00 GiB Max size of temporary file
- 191.38 MiB Average size of temporary file
- 28,137 Total number of sessions
- 155 sessions at 2024-07-30 03:23:44 Session peak
- 602d21h47m10s Total duration of sessions
- 30m51s Average duration of sessions
- 0 Average queries per session
- 6s971ms Average queries duration per session
- 30m44s Average idle time per session
- 28,137 Total number of connections
- 53 connections/s at 2024-07-30 03:22:44 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 8 queries/s Query Peak
- 2024-07-31 16:28:47 Date
SELECT Traffic
Key values
- 8 queries/s Query Peak
- 2024-07-31 16:28:47 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2024-07-28 14:00:58 Date
Queries duration
Key values
- 2d6h29m11s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 28 00 9 0ms 16m20s 1m50s 1s156ms 1s489ms 16m24s 01 24 0ms 4s242ms 3s537ms 8s185ms 8s308ms 10s767ms 02 9 0ms 5s320ms 3s46ms 3s858ms 4s89ms 5s320ms 03 5 0ms 4s40ms 2s21ms 0ms 2s347ms 4s40ms 04 14 0ms 3s917ms 1s586ms 1s272ms 1s428ms 10s675ms 05 41 0ms 5s536ms 2s295ms 6s566ms 13s860ms 25s259ms 06 21 0ms 33s284ms 6s231ms 3s918ms 10s575ms 1m 07 9 0ms 4s983ms 2s37ms 1s368ms 1s676ms 4s983ms 08 2 0ms 1s329ms 1s261ms 0ms 0ms 1s329ms 09 6 0ms 5s285ms 1s999ms 1s188ms 1s197ms 5s285ms 10 28 0ms 33s330ms 5s223ms 9s50ms 9s494ms 53s628ms 11 8 0ms 5s251ms 3s149ms 2s369ms 4s975ms 5s251ms 12 7 0ms 16s304ms 4s34ms 1s211ms 3s905ms 16s304ms 13 6 0ms 2m4s 22s475ms 1s214ms 1s416ms 2m4s 14 17 0ms 33s242ms 7s488ms 5s35ms 11s877ms 53s467ms 15 8 0ms 16s97ms 4s63ms 1s246ms 3s953ms 16s97ms 16 4 0ms 4s901ms 2s520ms 0ms 1s447ms 4s901ms 17 5 0ms 1s245ms 1s188ms 1s165ms 1s176ms 1s245ms 18 17 0ms 33s312ms 6s829ms 3s979ms 41s271ms 53s727ms 19 9 0ms 1s859ms 1s324ms 1s273ms 1s284ms 1s859ms 20 6 0ms 5s220ms 2s677ms 1s164ms 4s13ms 5s220ms 21 4 0ms 3s785ms 1s873ms 1s168ms 1s370ms 3s785ms 22 12 0ms 5s223ms 1s897ms 2s539ms 3s597ms 5s223ms 23 13 0ms 3m37s 19s52ms 3s894ms 4s95ms 3m37s Jul 29 00 9 0ms 16m21s 1m51s 1s349ms 3s926ms 16m26s 01 12 0ms 21s863ms 8s435ms 3s941ms 5s217ms 1m22s 02 9 0ms 8s127ms 3s150ms 1s542ms 8s127ms 9s461ms 03 4 0ms 6s225ms 3s809ms 1s168ms 3s958ms 6s225ms 04 15 0ms 5s387ms 2s938ms 4s287ms 5s250ms 10s764ms 05 49 0ms 5s383ms 2s330ms 11s789ms 13s735ms 26s939ms 06 28 0ms 33s256ms 4s964ms 5s396ms 9s512ms 53s669ms 07 11 0ms 4s218ms 2s272ms 1s184ms 3s923ms 7s10ms 08 23 0ms 3s959ms 1s444ms 2s213ms 3s928ms 14s783ms 09 16 0ms 24s674ms 6s711ms 6s8ms 22s573ms 24s674ms 10 44 0ms 50s290ms 7s298ms 26s276ms 41s264ms 53s783ms 11 30 0ms 3m49s 25s258ms 1m12s 1m31s 4m2s 12 25 0ms 1m47s 23s599ms 1m8s 1m23s 2m14s 13 14 0ms 1m34s 13s570ms 3s951ms 30s858ms 1m34s 14 21 0ms 33s390ms 5s632ms 1s403ms 9s519ms 53s740ms 15 9 0ms 4s60ms 2s324ms 1s533ms 3s959ms 8s233ms 16 11 0ms 5s686ms 1s851ms 1s379ms 2s571ms 5s686ms 17 7 0ms 1s756ms 1s456ms 1s187ms 1s721ms 1s756ms 18 34 0ms 24m12s 1m30s 1m56s 3m58s 24m12s 19 27 0ms 34m20s 1m47s 44s169ms 45s567ms 34m27s 20 19 0ms 37m25s 2m4s 9s830ms 47s351ms 37m25s 21 29 0ms 39m58s 2m20s 1m51s 3m2s 40m 22 47 0ms 5m16s 27s129ms 1m18s 1m21s 5m17s 23 127 1s65ms 2m56s 30s978ms 1m36s 1m41s 4m26s Jul 30 00 131 1s88ms 23m33s 56s246ms 2m50s 13m10s 24m14s 01 100 1s141ms 2m7s 37s202ms 1m22s 1m47s 2m46s 02 91 0ms 1h35m59s 1m41s 1m20s 1m25s 1h37m17s 03 107 1s189ms 1h3m37s 1m10s 1m24s 2m58s 1h5m9s 04 105 1s4ms 46m8s 59s850ms 1m30s 1m32s 47m14s 05 108 0ms 43s222ms 20s545ms 1m18s 1m23s 1m31s 06 65 0ms 1h58m26s 2m23s 1m24s 1m26s 1h59m6s 07 102 1s43ms 33m42s 54s81ms 1m25s 1m26s 35m2s 08 125 1s42ms 44s514ms 28s623ms 1m22s 1m29s 1m59s 09 167 1s14ms 1m15s 23s180ms 1m43s 2m2s 2m39s 10 297 1s29ms 33m57s 21s770ms 1m53s 1m55s 34m40s 11 122 1s44ms 2m9s 31s141ms 1m26s 1m47s 3m52s 12 92 1s31ms 41s27ms 37s437ms 1m19s 1m20s 1m55s 13 117 1s148ms 41s58ms 30s546ms 1m20s 1m35s 1m56s 14 105 1s22ms 17m13s 43s366ms 1m21s 1m29s 18m31s 15 91 1s10ms 41s14ms 38s6ms 1m20s 1m20s 1m21s 16 101 1s137ms 40s943ms 34s181ms 1m20s 1m21s 1m35s 17 105 1s154ms 41s186ms 33s235ms 1m20s 1m23s 2m20s 18 102 1s12ms 41s205ms 34s811ms 1m20s 1m20s 2m15s 19 93 1s7ms 41s441ms 37s81ms 1m21s 1m21s 1m22s 20 97 1s169ms 41s319ms 35s796ms 1m21s 1m23s 1m30s 21 92 1s139ms 41s710ms 37s206ms 1m21s 1m21s 1m22s 22 91 1s93ms 41s732ms 37s621ms 1m21s 1m22s 1m24s 23 111 1s3ms 2m42s 32s964ms 1m21s 1m26s 3m22s Jul 31 00 97 1s148ms 16m26s 45s545ms 1m21s 1m22s 17m10s 01 93 1s158ms 41s746ms 36s982ms 1m21s 1m21s 1m25s 02 95 1s88ms 41s461ms 36s322ms 1m21s 1m21s 1m22s 03 93 0ms 56s320ms 37s597ms 1m21s 1m21s 1m38s 04 105 1s144ms 41s716ms 32s699ms 1m21s 1m23s 1m25s 05 115 0ms 41s557ms 19s535ms 1m22s 1m25s 1m26s 06 17 0ms 33s360ms 6s883ms 3s947ms 41s288ms 53s945ms 07 6 0ms 7s56ms 5s250ms 0ms 6s338ms 13s883ms 08 5 0ms 4s93ms 1s786ms 1s101ms 1s195ms 4s93ms 09 11 0ms 4s809ms 2s421ms 2s725ms 4s113ms 4s809ms 10 63 0ms 1m31s 4s891ms 11s855ms 23s759ms 2m25s 11 9 0ms 3s906ms 1s565ms 1s207ms 1s310ms 3s906ms 12 3 0ms 1s373ms 1s244ms 0ms 1s179ms 1s373ms 13 6 0ms 4s522ms 2s626ms 1s199ms 3s946ms 4s522ms 14 23 0ms 3m3s 20s596ms 7s787ms 41s364ms 5m49s 15 36 0ms 12s201ms 2s588ms 3s444ms 20s723ms 22s358ms 16 220 0ms 1m1s 3s517ms 1m43s 2m17s 4m50s 17 6 0ms 3s900ms 1s676ms 1s210ms 1s327ms 3s900ms 18 21 0ms 33s359ms 6s248ms 5s441ms 42s599ms 53s867ms 19 4 0ms 1s306ms 1s174ms 1s56ms 1s178ms 1s306ms 20 7 0ms 5s263ms 2s111ms 1s941ms 2s523ms 5s263ms 21 3 0ms 1s467ms 1s280ms 0ms 1s374ms 1s467ms 22 86 0ms 41s799ms 36s822ms 1m21s 1m21s 1m21s 23 91 1s115ms 41s784ms 37s938ms 1m21s 1m21s 1m22s Aug 01 00 102 1s41ms 16m25s 43s309ms 1m22s 1m22s 17m12s 01 97 1s135ms 41s552ms 35s780ms 1m21s 1m21s 1m42s 02 91 1s11ms 41s778ms 37s821ms 1m21s 1m22s 1m25s 03 93 1s115ms 42s489ms 36s929ms 1m21s 1m22s 1m26s 04 91 1s74ms 45s655ms 37s773ms 1m21s 1m22s 1m23s 05 110 0ms 42s56ms 20s22ms 1m22s 1m23s 1m40s 06 32 0ms 33s376ms 6s25ms 11s73ms 41s307ms 1m 07 7 0ms 3s897ms 1s652ms 1s221ms 1s313ms 3s897ms 08 9 0ms 2m37s 19s606ms 2s818ms 6s412ms 2m37s 09 10 0ms 4s203ms 2s216ms 2s160ms 3s622ms 4s203ms 10 20 0ms 33s434ms 6s59ms 3s957ms 41s416ms 53s662ms 11 7 0ms 6s679ms 2s41ms 1s380ms 2s445ms 6s679ms 12 11 0ms 5s344ms 2s117ms 1s354ms 5s344ms 5s402ms 13 14 0ms 10s550ms 2s587ms 1s284ms 4s88ms 15s393ms 14 39 0ms 33s515ms 4s749ms 9s493ms 19s316ms 53s841ms 15 9 0ms 3s911ms 1s485ms 1s210ms 1s306ms 3s911ms 16 6 0ms 10s49ms 2s733ms 1s200ms 1s466ms 10s49ms 17 11 0ms 4s32ms 1s700ms 1s647ms 2s600ms 4s32ms 18 23 0ms 33s326ms 5s433ms 5s401ms 42s482ms 56s312ms 19 21 0ms 12s392ms 2s206ms 4s26ms 8s801ms 16s890ms 20 2 0ms 1s265ms 1s228ms 0ms 1s191ms 1s265ms 21 12 0ms 3s950ms 1s776ms 1s411ms 2s490ms 6s60ms 22 11 0ms 7s818ms 3s536ms 3s866ms 7s818ms 10s507ms 23 8 0ms 7s791ms 2s975ms 2s20ms 6s584ms 7s791ms Aug 02 00 38 0ms 16m24s 29s353ms 11s756ms 19s809ms 16m29s 01 11 0ms 5s11ms 2s463ms 3s869ms 5s11ms 5s244ms 02 23 0ms 17s81ms 4s316ms 7s721ms 7s905ms 17s81ms 03 17 0ms 6s476ms 2s241ms 2s785ms 6s476ms 11s562ms 04 10 0ms 3s974ms 1s779ms 1s208ms 1s421ms 3s974ms 05 59 0ms 6s979ms 2s303ms 14s838ms 22s888ms 27s697ms 06 17 0ms 33s580ms 6s711ms 1s608ms 9s491ms 53s868ms 07 20 0ms 11s207ms 2s773ms 2s733ms 5s107ms 27s682ms 08 3 0ms 15s421ms 7s2ms 0ms 4s310ms 15s421ms 09 42 0ms 38s951ms 2s970ms 9s31ms 10s996ms 38s951ms 10 19 0ms 33s398ms 6s766ms 5s469ms 9s534ms 53s936ms 11 22 0ms 30s187ms 4s352ms 5s202ms 11s188ms 30s187ms 12 18 0ms 7s434ms 2s110ms 1s645ms 4s28ms 11s428ms 13 10 0ms 4s713ms 1s850ms 1s425ms 3s60ms 6s14ms 14 57 0ms 33s417ms 6s995ms 41s441ms 58s251ms 2m11s 15 11 0ms 4s95ms 3s4ms 3s939ms 3s994ms 7s819ms 16 11 0ms 3s992ms 1s429ms 1s210ms 1s369ms 3s992ms 17 16 0ms 7s236ms 2s362ms 3s960ms 7s236ms 7s870ms 18 20 0ms 33s348ms 5s929ms 1s948ms 9s549ms 54s95ms 19 13 0ms 6s523ms 3s550ms 3s996ms 4s41ms 6s523ms 20 16 0ms 8s25ms 2s63ms 3s660ms 4s43ms 8s25ms 21 5 0ms 8m23s 1m41s 1s230ms 1s318ms 8m23s 22 7 0ms 3s962ms 1s976ms 1s199ms 1s211ms 5s127ms 23 5 0ms 5s283ms 2s907ms 1s143ms 2s868ms 5s283ms Aug 03 00 11 0ms 16m24s 1m31s 2s144ms 4s21ms 16m29s 01 12 0ms 3s922ms 1s529ms 1s364ms 2s141ms 3s922ms 02 9 0ms 4s44ms 2s620ms 3s861ms 4s44ms 6s923ms 03 10 0ms 5s680ms 2s302ms 1s316ms 2s163ms 7s620ms 04 10 0ms 7s111ms 2s498ms 1s370ms 4s391ms 7s111ms 05 64 0ms 5s452ms 2s206ms 10s821ms 19s464ms 23s880ms 06 14 0ms 4s462ms 2s96ms 2s731ms 4s162ms 5s714ms 07 12 0ms 5s477ms 2s782ms 1s216ms 5s431ms 11s814ms 08 11 0ms 3s995ms 2s258ms 1s431ms 3s980ms 5s353ms 09 6 0ms 5s287ms 2s179ms 1s305ms 2s507ms 5s287ms 10 12 0ms 4s107ms 2s238ms 3s971ms 4s24ms 4s107ms 11 10 0ms 6s523ms 2s517ms 2s655ms 5s35ms 6s523ms 12 5 0ms 4s262ms 2s362ms 1s254ms 3s871ms 4s262ms 13 4 0ms 1m7s 18s550ms 1s123ms 3s977ms 1m7s 14 6 0ms 18s455ms 4s829ms 1s323ms 6s644ms 18s455ms 15 6 0ms 5s258ms 2s357ms 1s202ms 1s284ms 5s258ms 16 7 0ms 2s914ms 1s632ms 1s240ms 1s308ms 2s914ms 17 5 0ms 3s929ms 1s815ms 1s178ms 2s779ms 3s929ms 18 31 0ms 1m10s 12s958ms 54s899ms 1m1s 1m10s 19 55 0ms 23m37s 1m26s 2m34s 7m18s 23m40s 20 9 0ms 1s534ms 1s180ms 1s174ms 1s534ms 2s306ms 21 8 0ms 1s583ms 1s275ms 1s364ms 1s583ms 2s326ms 22 7 0ms 1s821ms 1s280ms 1s162ms 1s290ms 1s821ms 23 3 0ms 1s323ms 1s280ms 0ms 1s322ms 2s519ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 28 00 8 0 2m3s 0ms 1s156ms 16m20s 01 24 0 3s537ms 4s18ms 8s185ms 10s767ms 02 9 0 3s46ms 0ms 3s858ms 5s320ms 03 5 0 2s21ms 0ms 0ms 4s40ms 04 14 0 1s586ms 0ms 1s272ms 10s675ms 05 37 0 2s305ms 0ms 6s566ms 25s259ms 06 11 10 6s231ms 1s318ms 6s736ms 53s660ms 07 9 0 2s37ms 1s190ms 1s368ms 4s983ms 08 2 0 1s261ms 0ms 0ms 1s329ms 09 6 0 1s999ms 0ms 1s188ms 5s285ms 10 18 10 5s223ms 1s514ms 9s50ms 53s628ms 11 8 0 3s149ms 0ms 2s369ms 5s251ms 12 7 0 4s34ms 0ms 1s211ms 16s304ms 13 6 0 22s475ms 0ms 1s214ms 2m4s 14 7 10 7s488ms 0ms 5s35ms 53s467ms 15 8 0 4s63ms 0ms 1s246ms 16s97ms 16 4 0 2s520ms 0ms 0ms 2s489ms 17 5 0 1s188ms 0ms 1s165ms 1s245ms 18 7 10 6s829ms 1s228ms 3s979ms 53s727ms 19 9 0 1s324ms 1s125ms 1s273ms 1s859ms 20 6 0 2s677ms 0ms 1s164ms 5s220ms 21 4 0 1s873ms 0ms 1s168ms 3s785ms 22 12 0 1s897ms 0ms 2s539ms 5s223ms 23 12 0 20s486ms 1s402ms 3s894ms 3m37s Jul 29 00 8 0 2m4s 0ms 1s349ms 16m21s 01 12 0 8s435ms 1s91ms 3s941ms 1m22s 02 9 0 3s150ms 1s159ms 1s542ms 9s461ms 03 4 0 3s809ms 0ms 1s168ms 6s225ms 04 14 0 2s911ms 1s235ms 4s287ms 10s764ms 05 45 0 2s342ms 1s190ms 11s789ms 26s939ms 06 13 10 5s565ms 1s254ms 3s930ms 53s669ms 07 11 0 2s272ms 0ms 1s184ms 4s218ms 08 23 0 1s444ms 1s148ms 2s213ms 14s783ms 09 13 0 7s563ms 1s179ms 5s183ms 24s674ms 10 33 10 7s216ms 8s285ms 26s276ms 53s783ms 11 30 0 25s258ms 7s672ms 1m12s 4m2s 12 24 0 24s501ms 6s66ms 1m8s 2m14s 13 10 0 5s437ms 1s124ms 2s704ms 30s858ms 14 11 10 5s632ms 1s208ms 1s403ms 53s740ms 15 9 0 2s324ms 0ms 1s533ms 8s233ms 16 11 0 1s851ms 1s58ms 1s379ms 5s686ms 17 7 0 1s456ms 0ms 1s187ms 1s721ms 18 12 10 6s2ms 1s723ms 4s 41s231ms 19 27 0 1m47s 8s112ms 44s169ms 34m27s 20 19 0 2m4s 2s510ms 9s830ms 37m25s 21 14 0 3m35s 1s234ms 40s512ms 40m 22 29 0 40s26ms 41s334ms 1m18s 5m17s 23 121 0 32s386ms 1m20s 1m34s 2m18s Jul 30 00 99 0 45s377ms 1m20s 1m22s 1m43s 01 92 0 37s78ms 1m17s 1m18s 1m22s 02 89 0 1m41s 1m18s 1m19s 1m25s 03 96 0 1m16s 1m20s 1m22s 3m10s 04 100 0 34s931ms 1m24s 1m27s 1m32s 05 104 0 21s247ms 1m18s 1m18s 1m24s 06 55 10 2m23s 1m19s 1m24s 1h59m6s 07 102 0 54s81ms 1m19s 1m25s 1m29s 08 125 0 28s623ms 1m18s 1m22s 1m43s 09 164 0 23s565ms 1m21s 1m43s 2m5s 10 287 10 21s770ms 1m30s 1m53s 1m56s 11 122 0 31s141ms 1m24s 1m26s 3m13s 12 91 0 37s833ms 1m19s 1m19s 1m24s 13 117 0 30s546ms 1m19s 1m20s 1m45s 14 95 10 43s366ms 1m19s 1m20s 1m23s 15 91 0 38s6ms 1m19s 1m20s 1m21s 16 101 0 34s181ms 1m19s 1m20s 1m21s 17 105 0 33s235ms 1m19s 1m20s 1m24s 18 92 10 34s811ms 1m20s 1m20s 1m20s 19 93 0 37s81ms 1m20s 1m21s 1m21s 20 96 0 36s135ms 1m19s 1m21s 1m24s 21 92 0 37s206ms 1m20s 1m21s 1m22s 22 91 0 37s621ms 1m20s 1m21s 1m22s 23 111 0 32s964ms 1m20s 1m21s 1m29s Jul 31 00 96 0 45s967ms 1m20s 1m21s 1m22s 01 93 0 36s982ms 1m20s 1m21s 1m22s 02 95 0 36s322ms 1m20s 1m21s 1m21s 03 93 0 37s597ms 1m20s 1m21s 1m22s 04 105 0 32s699ms 1m21s 1m21s 1m24s 05 111 0 20s160ms 1m20s 1m22s 1m26s 06 7 10 6s883ms 1s267ms 3s947ms 53s945ms 07 6 0 5s250ms 0ms 0ms 6s740ms 08 5 0 1s786ms 0ms 1s101ms 4s93ms 09 11 0 2s421ms 1s192ms 2s725ms 4s809ms 10 51 10 4s979ms 7s460ms 14s241ms 1m31s 11 9 0 1s565ms 0ms 1s207ms 3s906ms 12 3 0 1s244ms 0ms 0ms 1s373ms 13 6 0 2s626ms 0ms 1s199ms 4s522ms 14 14 9 20s596ms 1s359ms 7s787ms 5m49s 15 34 0 2s610ms 1s191ms 3s444ms 20s723ms 16 219 0 3s515ms 11s9ms 1m43s 4m50s 17 6 0 1s676ms 0ms 1s210ms 3s900ms 18 11 10 6s248ms 2s935ms 5s441ms 53s867ms 19 4 0 1s174ms 0ms 1s56ms 1s306ms 20 7 0 2s111ms 0ms 1s941ms 5s263ms 21 3 0 1s280ms 0ms 0ms 1s467ms 22 86 0 36s822ms 1m20s 1m21s 1m21s 23 91 0 37s938ms 1m20s 1m21s 1m21s Aug 01 00 101 0 43s688ms 1m21s 1m22s 1m23s 01 97 0 35s780ms 1m20s 1m21s 1m23s 02 91 0 37s821ms 1m20s 1m21s 1m24s 03 93 0 36s929ms 1m21s 1m21s 1m22s 04 91 0 37s773ms 1m21s 1m21s 1m22s 05 106 0 20s695ms 1m20s 1m22s 1m24s 06 22 10 6s25ms 8s96ms 11s73ms 53s933ms 07 7 0 1s652ms 0ms 1s221ms 3s897ms 08 9 0 19s606ms 1s170ms 2s818ms 2m37s 09 10 0 2s216ms 0ms 2s160ms 4s203ms 10 10 10 6s59ms 1s862ms 3s957ms 53s662ms 11 7 0 2s41ms 0ms 1s380ms 6s679ms 12 11 0 2s117ms 1s200ms 1s354ms 5s402ms 13 14 0 2s587ms 0ms 1s284ms 15s393ms 14 27 10 4s830ms 2s650ms 9s493ms 53s841ms 15 9 0 1s485ms 0ms 1s210ms 3s911ms 16 6 0 2s733ms 0ms 1s200ms 10s49ms 17 11 0 1s700ms 1s206ms 1s647ms 4s32ms 18 13 10 5s433ms 1s277ms 5s401ms 54s22ms 19 21 0 2s206ms 1s251ms 4s26ms 16s890ms 20 2 0 1s228ms 0ms 0ms 1s265ms 21 12 0 1s776ms 1s194ms 1s411ms 6s60ms 22 11 0 3s536ms 1s206ms 3s866ms 10s507ms 23 7 0 2s935ms 0ms 1s604ms 7s791ms Aug 02 00 37 0 30s13ms 3s977ms 11s756ms 16m24s 01 11 0 2s463ms 1s250ms 3s869ms 5s244ms 02 23 0 4s316ms 3s947ms 7s721ms 17s81ms 03 17 0 2s241ms 1s542ms 2s785ms 11s562ms 04 10 0 1s779ms 1s149ms 1s208ms 3s974ms 05 55 0 2s313ms 3s914ms 14s838ms 27s697ms 06 7 10 6s711ms 1s40ms 1s608ms 53s868ms 07 20 0 2s773ms 1s188ms 2s733ms 27s682ms 08 3 0 7s2ms 0ms 0ms 15s421ms 09 41 0 2s983ms 2s506ms 8s366ms 38s951ms 10 10 9 6s766ms 1s406ms 5s469ms 53s936ms 11 22 0 4s352ms 2s55ms 5s202ms 30s187ms 12 18 0 2s110ms 1s192ms 1s645ms 8s180ms 13 8 0 1s833ms 0ms 1s181ms 6s14ms 14 47 10 6s995ms 2s680ms 41s441ms 2m11s 15 11 0 3s4ms 1s203ms 3s939ms 7s819ms 16 11 0 1s429ms 1s21ms 1s210ms 3s992ms 17 16 0 2s362ms 1s400ms 3s960ms 7s870ms 18 10 10 5s929ms 1s266ms 1s948ms 54s95ms 19 13 0 3s550ms 3s882ms 3s996ms 6s523ms 20 16 0 2s63ms 1s154ms 3s660ms 8s25ms 21 5 0 1m41s 0ms 1s230ms 8m23s 22 7 0 1s976ms 0ms 1s199ms 5s127ms 23 5 0 2s907ms 0ms 1s143ms 5s283ms Aug 03 00 10 0 1m40s 1s189ms 2s144ms 16m24s 01 12 0 1s529ms 1s164ms 1s364ms 3s922ms 02 9 0 2s620ms 1s198ms 3s861ms 6s923ms 03 10 0 2s302ms 1s199ms 1s316ms 7s620ms 04 10 0 2s498ms 1s187ms 1s370ms 7s111ms 05 61 0 2s189ms 3s870ms 10s821ms 23s880ms 06 14 0 2s96ms 1s132ms 2s731ms 5s714ms 07 12 0 2s782ms 1s27ms 1s216ms 11s814ms 08 11 0 2s258ms 1s146ms 1s431ms 5s353ms 09 6 0 2s179ms 0ms 1s305ms 5s287ms 10 12 0 2s238ms 1s396ms 3s971ms 4s107ms 11 10 0 2s517ms 1s212ms 2s655ms 6s523ms 12 5 0 2s362ms 0ms 1s254ms 4s262ms 13 4 0 18s550ms 0ms 1s123ms 1m7s 14 6 0 4s829ms 0ms 1s323ms 18s455ms 15 6 0 2s357ms 0ms 1s202ms 3s967ms 16 7 0 1s632ms 0ms 1s240ms 2s914ms 17 5 0 1s815ms 0ms 1s178ms 3s929ms 18 5 26 12s958ms 1s473ms 53s707ms 1m10s 19 9 46 1m26s 1m19s 2m34s 23m40s 20 9 0 1s180ms 1s10ms 1s174ms 2s306ms 21 8 0 1s275ms 0ms 1s364ms 2s326ms 22 7 0 1s280ms 0ms 1s162ms 1s821ms 23 3 0 1s280ms 0ms 0ms 2s519ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jul 28 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 29 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 1 0 0 0 10s845ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 12 0 0 0 4m5s 0ms 0ms 3m56s 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 30 00 11 6 0 0 1m43s 0ms 0ms 1m21s 01 5 3 0 0 38s627ms 0ms 0ms 1m5s 02 1 0 0 0 2m42s 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jul 31 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 01 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 02 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 1 0 0 0 2s439ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Aug 03 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jul 28 00 0 7 7.00 0.00% 01 0 24 24.00 0.00% 02 0 9 9.00 0.00% 03 0 5 5.00 0.00% 04 0 14 14.00 0.00% 05 0 41 41.00 0.00% 06 0 11 11.00 0.00% 07 0 9 9.00 0.00% 08 0 2 2.00 0.00% 09 0 6 6.00 0.00% 10 0 18 18.00 0.00% 11 0 8 8.00 0.00% 12 0 7 7.00 0.00% 13 0 6 6.00 0.00% 14 0 7 7.00 0.00% 15 0 8 8.00 0.00% 16 0 4 4.00 0.00% 17 0 5 5.00 0.00% 18 0 7 7.00 0.00% 19 0 9 9.00 0.00% 20 0 6 6.00 0.00% 21 0 4 4.00 0.00% 22 0 12 12.00 0.00% 23 0 13 13.00 0.00% Jul 29 00 0 7 7.00 0.00% 01 0 12 12.00 0.00% 02 0 9 9.00 0.00% 03 0 4 4.00 0.00% 04 0 15 15.00 0.00% 05 0 49 49.00 0.00% 06 0 19 19.00 0.00% 07 0 11 11.00 0.00% 08 0 23 23.00 0.00% 09 0 13 13.00 0.00% 10 0 32 32.00 0.00% 11 0 30 30.00 0.00% 12 0 25 25.00 0.00% 13 0 11 11.00 0.00% 14 0 12 12.00 0.00% 15 0 9 9.00 0.00% 16 0 12 12.00 0.00% 17 0 7 7.00 0.00% 18 0 24 24.00 0.00% 19 0 27 27.00 0.00% 20 0 19 19.00 0.00% 21 0 29 29.00 0.00% 22 0 47 47.00 0.00% 23 0 127 127.00 0.00% Jul 30 00 0 129 129.00 0.00% 01 0 100 100.00 0.00% 02 0 91 91.00 0.00% 03 0 107 107.00 0.00% 04 0 105 105.00 0.00% 05 0 108 108.00 0.00% 06 0 57 57.00 0.00% 07 0 102 102.00 0.00% 08 0 100 100.00 0.00% 09 0 167 167.00 0.00% 10 0 293 293.00 0.00% 11 0 130 130.00 0.00% 12 0 90 90.00 0.00% 13 0 117 117.00 0.00% 14 0 95 95.00 0.00% 15 0 91 91.00 0.00% 16 0 101 101.00 0.00% 17 0 105 105.00 0.00% 18 0 92 92.00 0.00% 19 0 93 93.00 0.00% 20 0 97 97.00 0.00% 21 0 92 92.00 0.00% 22 0 91 91.00 0.00% 23 0 111 111.00 0.00% Jul 31 00 0 95 95.00 0.00% 01 0 93 93.00 0.00% 02 0 95 95.00 0.00% 03 0 93 93.00 0.00% 04 0 105 105.00 0.00% 05 0 115 115.00 0.00% 06 0 7 7.00 0.00% 07 0 6 6.00 0.00% 08 0 5 5.00 0.00% 09 0 11 11.00 0.00% 10 0 53 53.00 0.00% 11 0 10 10.00 0.00% 12 0 3 3.00 0.00% 13 0 6 6.00 0.00% 14 0 14 14.00 0.00% 15 0 39 39.00 0.00% 16 0 223 223.00 0.00% 17 0 6 6.00 0.00% 18 0 11 11.00 0.00% 19 0 4 4.00 0.00% 20 0 7 7.00 0.00% 21 0 3 3.00 0.00% 22 0 86 86.00 0.00% 23 0 91 91.00 0.00% Aug 01 00 0 101 101.00 0.00% 01 0 97 97.00 0.00% 02 0 91 91.00 0.00% 03 0 93 93.00 0.00% 04 0 91 91.00 0.00% 05 0 109 109.00 0.00% 06 0 23 23.00 0.00% 07 0 7 7.00 0.00% 08 0 11 11.00 0.00% 09 0 10 10.00 0.00% 10 0 10 10.00 0.00% 11 0 7 7.00 0.00% 12 0 11 11.00 0.00% 13 0 14 14.00 0.00% 14 0 30 30.00 0.00% 15 0 10 10.00 0.00% 16 0 6 6.00 0.00% 17 0 11 11.00 0.00% 18 0 13 13.00 0.00% 19 0 21 21.00 0.00% 20 0 2 2.00 0.00% 21 0 12 12.00 0.00% 22 0 11 11.00 0.00% 23 0 8 8.00 0.00% Aug 02 00 0 37 37.00 0.00% 01 0 11 11.00 0.00% 02 0 23 23.00 0.00% 03 0 17 17.00 0.00% 04 0 10 10.00 0.00% 05 0 59 59.00 0.00% 06 0 8 8.00 0.00% 07 0 21 21.00 0.00% 08 0 3 3.00 0.00% 09 0 39 39.00 0.00% 10 0 12 12.00 0.00% 11 0 22 22.00 0.00% 12 0 18 18.00 0.00% 13 0 13 13.00 0.00% 14 0 48 48.00 0.00% 15 0 13 13.00 0.00% 16 0 15 15.00 0.00% 17 0 16 16.00 0.00% 18 0 10 10.00 0.00% 19 0 13 13.00 0.00% 20 0 16 16.00 0.00% 21 0 5 5.00 0.00% 22 0 7 7.00 0.00% 23 0 5 5.00 0.00% Aug 03 00 0 10 10.00 0.00% 01 0 12 12.00 0.00% 02 0 9 9.00 0.00% 03 0 10 10.00 0.00% 04 0 10 10.00 0.00% 05 0 64 64.00 0.00% 06 0 14 14.00 0.00% 07 0 12 12.00 0.00% 08 0 11 11.00 0.00% 09 0 6 6.00 0.00% 10 0 12 12.00 0.00% 11 0 10 10.00 0.00% 12 0 5 5.00 0.00% 13 0 4 4.00 0.00% 14 0 6 6.00 0.00% 15 0 6 6.00 0.00% 16 0 7 7.00 0.00% 17 0 5 5.00 0.00% 18 0 5 5.00 0.00% 19 0 9 9.00 0.00% 20 0 9 9.00 0.00% 21 0 8 8.00 0.00% 22 0 7 7.00 0.00% 23 0 3 3.00 0.00% Day Hour Count Average / Second Jul 28 00 83 0.02/s 01 81 0.02/s 02 83 0.02/s 03 77 0.02/s 04 85 0.02/s 05 89 0.02/s 06 79 0.02/s 07 90 0.03/s 08 109 0.03/s 09 78 0.02/s 10 80 0.02/s 11 78 0.02/s 12 85 0.02/s 13 79 0.02/s 14 110 0.03/s 15 245 0.07/s 16 960 0.27/s 17 256 0.07/s 18 80 0.02/s 19 81 0.02/s 20 72 0.02/s 21 72 0.02/s 22 81 0.02/s 23 83 0.02/s Jul 29 00 80 0.02/s 01 79 0.02/s 02 80 0.02/s 03 81 0.02/s 04 360 0.10/s 05 602 0.17/s 06 237 0.07/s 07 515 0.14/s 08 84 0.02/s 09 101 0.03/s 10 130 0.04/s 11 103 0.03/s 12 309 0.09/s 13 503 0.14/s 14 493 0.14/s 15 722 0.20/s 16 465 0.13/s 17 627 0.17/s 18 751 0.21/s 19 700 0.19/s 20 73 0.02/s 21 76 0.02/s 22 107 0.03/s 23 197 0.05/s Jul 30 00 178 0.05/s 01 183 0.05/s 02 170 0.05/s 03 316 0.09/s 04 181 0.05/s 05 158 0.04/s 06 132 0.04/s 07 166 0.05/s 08 188 0.05/s 09 219 0.06/s 10 171 0.05/s 11 165 0.05/s 12 171 0.05/s 13 188 0.05/s 14 159 0.04/s 15 156 0.04/s 16 163 0.05/s 17 168 0.05/s 18 219 0.06/s 19 450 0.12/s 20 158 0.04/s 21 163 0.05/s 22 166 0.05/s 23 168 0.05/s Jul 31 00 164 0.05/s 01 163 0.05/s 02 168 0.05/s 03 167 0.05/s 04 172 0.05/s 05 143 0.04/s 06 83 0.02/s 07 87 0.02/s 08 81 0.02/s 09 79 0.02/s 10 94 0.03/s 11 78 0.02/s 12 74 0.02/s 13 79 0.02/s 14 75 0.02/s 15 108 0.03/s 16 829 0.23/s 17 70 0.02/s 18 80 0.02/s 19 78 0.02/s 20 81 0.02/s 21 80 0.02/s 22 156 0.04/s 23 160 0.04/s Aug 01 00 166 0.05/s 01 169 0.05/s 02 165 0.05/s 03 169 0.05/s 04 170 0.05/s 05 155 0.04/s 06 82 0.02/s 07 81 0.02/s 08 77 0.02/s 09 80 0.02/s 10 82 0.02/s 11 79 0.02/s 12 83 0.02/s 13 91 0.03/s 14 80 0.02/s 15 79 0.02/s 16 72 0.02/s 17 76 0.02/s 18 78 0.02/s 19 77 0.02/s 20 75 0.02/s 21 69 0.02/s 22 104 0.03/s 23 97 0.03/s Aug 02 00 82 0.02/s 01 77 0.02/s 02 104 0.03/s 03 78 0.02/s 04 80 0.02/s 05 92 0.03/s 06 80 0.02/s 07 77 0.02/s 08 79 0.02/s 09 189 0.05/s 10 79 0.02/s 11 73 0.02/s 12 99 0.03/s 13 85 0.02/s 14 86 0.02/s 15 72 0.02/s 16 76 0.02/s 17 77 0.02/s 18 82 0.02/s 19 75 0.02/s 20 75 0.02/s 21 75 0.02/s 22 76 0.02/s 23 80 0.02/s Aug 03 00 78 0.02/s 01 76 0.02/s 02 80 0.02/s 03 76 0.02/s 04 221 0.06/s 05 304 0.08/s 06 305 0.08/s 07 202 0.06/s 08 866 0.24/s 09 80 0.02/s 10 81 0.02/s 11 76 0.02/s 12 94 0.03/s 13 78 0.02/s 14 74 0.02/s 15 1,497 0.42/s 16 315 0.09/s 17 75 0.02/s 18 78 0.02/s 19 73 0.02/s 20 76 0.02/s 21 72 0.02/s 22 80 0.02/s 23 80 0.02/s Day Hour Count Average Duration Average idle time Jul 28 00 83 29m52s 29m40s 01 81 30m12s 30m11s 02 83 29m17s 29m17s 03 77 30m34s 30m34s 04 85 29m10s 29m9s 05 89 26m26s 26m25s 06 79 29m33s 29m31s 07 90 27m54s 27m54s 08 109 21m9s 21m9s 09 78 31m34s 31m34s 10 80 30m7s 30m5s 11 78 30m42s 30m42s 12 84 29m25s 29m24s 13 80 30m17s 30m16s 14 110 18m55s 18m54s 15 245 10m59s 10m58s 16 960 2m29s 2m29s 17 256 9m20s 9m20s 18 80 30m31s 30m29s 19 81 30m31s 30m31s 20 72 30m6s 30m6s 21 72 31m20s 31m19s 22 81 30m13s 30m12s 23 83 28m55s 28m52s Jul 29 00 80 30m21s 30m8s 01 79 30m43s 30m42s 02 80 30m37s 30m37s 03 81 29m42s 29m42s 04 360 7m9s 7m9s 05 602 3m56s 3m56s 06 237 9m45s 9m44s 07 515 4m38s 4m38s 08 78 30m20s 30m20s 09 101 24m54s 24m53s 10 129 18m43s 18m41s 11 104 23m33s 23m26s 12 308 8m25s 8m23s 13 503 4m36s 4m36s 14 493 4m59s 4m59s 15 722 3m22s 3m22s 16 465 5m 5m 17 626 3m49s 3m49s 18 751 3m24s 3m20s 19 704 6m37s 6m33s 20 76 54m26s 53m55s 21 76 30m46s 29m52s 22 106 23m49s 23m37s 23 198 12m40s 12m21s Jul 30 00 178 13m50s 13m8s 01 182 13m45s 13m25s 02 171 14m14s 13m20s 03 315 8m4s 7m40s 04 181 13m32s 12m57s 05 159 15m7s 14m53s 06 131 18m30s 17m19s 07 168 17m 16m27s 08 182 13m47s 13m27s 09 217 11m46s 11m29s 10 167 14m37s 13m58s 11 167 15m7s 14m44s 12 167 15m5s 14m45s 13 188 12m51s 12m32s 14 159 14m26s 13m57s 15 157 14m10s 13m48s 16 162 15m14s 14m52s 17 168 15m18s 14m57s 18 228 33m7s 32m52s 19 454 9m12s 9m4s 20 158 15m2s 14m40s 21 163 15m 14m39s 22 166 14m36s 14m15s 23 168 14m39s 14m17s Jul 31 00 164 14m55s 14m28s 01 164 14m41s 14m20s 02 168 14m39s 14m19s 03 167 14m36s 14m15s 04 171 14m18s 13m58s 05 144 16m3s 15m48s 06 83 28m19s 28m18s 07 87 28m33s 28m33s 08 81 30m24s 30m24s 09 78 30m37s 30m37s 10 95 25m3s 25m 11 78 30m51s 30m51s 12 74 32m40s 32m40s 13 79 30m45s 30m45s 14 75 30m20s 30m14s 15 108 23m28s 23m28s 16 829 2m53s 2m52s 17 70 32m31s 32m31s 18 80 31m2s 31m1s 19 78 31m24s 31m24s 20 81 30m7s 30m7s 21 80 29m34s 29m34s 22 155 13m37s 13m17s 23 160 15m30s 15m8s Aug 01 00 167 15m1s 14m35s 01 169 14m45s 14m25s 02 165 14m39s 14m18s 03 169 14m46s 14m26s 04 169 14m34s 14m14s 05 156 15m43s 15m29s 06 82 28m33s 28m31s 07 81 29m29s 29m29s 08 77 33m10s 33m8s 09 80 30m2s 30m2s 10 82 29m51s 29m50s 11 79 30m22s 30m21s 12 83 29m37s 29m37s 13 91 25m46s 25m46s 14 80 31m4s 31m2s 15 78 31m2s 31m2s 16 72 31m40s 31m39s 17 76 30m56s 30m55s 18 78 30m55s 30m54s 19 77 31m4s 31m3s 20 76 34m34s 34m34s 21 69 30m32s 30m31s 22 104 23m48s 23m48s 23 97 23m47s 23m46s Aug 02 00 82 30m3s 29m49s 01 77 31m50s 31m49s 02 104 23m58s 23m57s 03 78 30m17s 30m16s 04 80 30m22s 30m22s 05 92 25m56s 25m55s 06 80 29m55s 29m54s 07 77 32m4s 32m3s 08 79 31m30s 31m29s 09 188 13m36s 13m36s 10 78 29m46s 29m45s 11 73 31m55s 31m54s 12 99 3d4h9m11s 3d4h9m11s 13 85 30m7s 30m7s 14 86 28m8s 28m3s 15 72 31m32s 31m31s 16 76 31m29s 31m29s 17 77 31m20s 31m20s 18 84 41m6s 41m4s 19 75 30m41s 30m41s 20 75 30m29s 30m28s 21 75 31m6s 30m59s 22 76 31m35s 31m35s 23 80 30m43s 30m43s Aug 03 00 78 31m21s 31m9s 01 76 31m2s 31m2s 02 80 30m38s 30m37s 03 76 31m50s 31m50s 04 221 10m31s 10m30s 05 304 8m16s 8m16s 06 305 7m42s 7m42s 07 202 12m19s 12m19s 08 866 2m52s 2m52s 09 80 30m18s 30m18s 10 81 29m54s 29m54s 11 76 31m46s 31m46s 12 94 26m10s 26m10s 13 78 30m25s 30m24s 14 74 31m17s 31m17s 15 1,497 1m40s 1m40s 16 315 7m7s 7m7s 17 75 31m51s 31m51s 18 77 30m55s 30m50s 19 74 31m7s 30m3s 20 76 31m25s 31m25s 21 72 30m56s 30m56s 22 80 30m42s 30m41s 23 80 30m39s 30m39s -
Connections
Established Connections
Key values
- 53 connections Connection Peak
- 2024-07-30 03:22:44 Date
Connections per database
Key values
- ctdprd51 Main Database
- 28,137 connections Total
Connections per user
Key values
- pubeu Main User
- 28,137 connections Total
Connections per host
Key values
- 10.12.5.37 Main host with 17270 connections
- 28,137 Total connections
-
Sessions
Simultaneous sessions
Key values
- 155 sessions Session Peak
- 2024-07-30 03:23:44 Date
Histogram of session times
Key values
- 12,092 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 28,137 sessions Total
Sessions per user
Key values
- pubeu Main User
- 28,137 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 28,137 sessions Total
Host Count Total Duration Average Duration 10.12.5.122 22 312d11h12m49s 14d4h52m24s 10.12.5.36 38 2h2m20s 3m13s 10.12.5.37 17,270 57d1h16m53s 4m45s 10.12.5.38 2,628 56d4m 30m41s 10.12.5.39 2,598 55d23h37m17s 31m1s 10.12.5.40 170 14h29m11s 5m6s 10.12.5.45 2,692 55d23h51m42s 29m57s 10.12.5.46 2,642 56d8m15s 30m31s 192.168.201.10 12 4d6h5m14s 8h30m26s 192.168.201.14 5 1d9h6m52s 6h37m22s 192.168.201.18 2 959ms 479ms 192.168.201.6 7 2d23h41m3s 10h14m26s ::1 51 2h11m27s 2m34s -
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 4,955,957 buffers Checkpoint Peak
- 2024-07-30 00:35:02 Date
- 1620.030 seconds Highest write time
- 0.880 seconds Sync time
Checkpoints Wal files
Key values
- 896 files Wal files usage Peak
- 2024-07-30 04:36:46 Date
Checkpoints distance
Key values
- 17,715.23 Mo Distance Peak
- 2024-07-30 03:59:34 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jul 28 00 1,087 109.09s 0.004s 109.17s 01 78 7.903s 0.001s 7.919s 02 50,191 1,636.496s 0.003s 1,636.973s 03 396 39.858s 0.002s 39.889s 04 99 10.088s 0.002s 10.118s 05 153 15.523s 0.002s 15.555s 06 5,251 526.11s 0.003s 526.626s 07 55,210 1,643.476s 0.003s 1,643.602s 08 220 22.129s 0.002s 22.159s 09 50,348 1,623.723s 0.002s 1,624.193s 10 2,264 226.899s 0.003s 226.944s 11 279 28.13s 0.002s 28.16s 12 113 11.403s 0.002s 11.433s 13 4,208 421.603s 0.003s 421.69s 14 626 62.897s 0.003s 62.928s 15 208 21.03s 0.002s 21.061s 16 1,845 185.108s 0.002s 185.138s 17 407 40.99s 0.003s 41.021s 18 152 15.417s 0.002s 15.448s 19 216 21.726s 0.002s 21.756s 20 130 13.215s 0.002s 13.246s 21 82 8.311s 0.001s 8.327s 22 281,568 1,638.683s 0.004s 1,638.815s 23 1,073 107.744s 0.003s 107.822s Jul 29 00 1,566 157.082s 0.004s 157.114s 01 1,223 122.741s 0.003s 122.772s 02 202 20.423s 0.002s 20.454s 03 1,883 188.745s 0.003s 188.838s 04 5,698 570.819s 0.003s 571.258s 05 64,094 2,169.798s 0.004s 2,170.289s 06 48,294 1,619.534s 0.002s 1,620.026s 07 60,815 1,688.506s 0.005s 1,688.652s 08 723 72.647s 0.003s 72.677s 09 2,228 223.247s 0.148s 223.534s 10 165 16.627s 0.001s 16.642s 11 258,503 2,076.563s 0.335s 2,095.218s 12 1,322 132.724s 0.009s 136.309s 13 22,978 1,637.546s 0.01s 1,644.643s 14 34,625 1,669.377s 0.007s 1,674.696s 15 3,488 349.635s 0.004s 349.773s 16 505 50.815s 0.003s 50.847s 17 718 72.041s 0.004s 72.073s 18 2,410,762 2,491.851s 0.755s 2,519.906s 19 845,050 3,238.671s 0.028s 3,245.346s 20 32,052 1,644.277s 0.004s 1,644.341s 21 3,760,500 102.655s 0.012s 137.192s 22 679,848 2,407.532s 0.014s 2,414.973s 23 316,858 1,628.009s 0.008s 1,634.937s Jul 30 00 9,013,000 2,687.357s 0.388s 2,726.879s 01 1,770,732 1,839.699s 0.231s 1,854.469s 02 114,916 1,649.153s 0.004s 1,650.347s 03 967,890 3,109.647s 0.945s 3,136.811s 04 106,330 240.499s 2.2s 381.062s 05 535,628 3,239.048s 0.011s 3,248.296s 06 103,529 2,181.371s 0.105s 2,181.918s 07 1,047,411 3,267.626s 0.005s 3,278.037s 08 348 34.965s 0.002s 34.98s 09 26,873 1,724.786s 0.003s 1,724.847s 10 20,586 1,673.363s 0.007s 1,673.465s 11 821 82.447s 0.003s 82.476s 12 528 53.123s 0.003s 53.152s 13 2,214 221.857s 0.003s 221.942s 14 399 40.18s 0.002s 40.21s 15 293 29.571s 0.002s 29.603s 16 251 25.334s 0.002s 25.363s 17 11,049 1,107.072s 0.002s 1,107.237s 18 46,957 1,646.908s 0.004s 1,646.957s 19 9,971 998.667s 0.003s 998.716s 20 176 17.817s 0.002s 17.848s 21 198 20.029s 0.002s 20.06s 22 428 43.117s 0.002s 43.147s 23 56,251 2,181.677s 0.004s 2,181.819s Jul 31 00 1,358 136.252s 0.004s 136.284s 01 312 31.445s 0.002s 31.477s 02 4,713 472.141s 0.004s 472.264s 03 1,375 137.945s 0.004s 137.978s 04 889 89.287s 0.002s 89.322s 05 106,028 2,182.21s 0.004s 2,182.507s 06 3,450 345.746s 0.004s 345.777s 07 9,367 938.113s 0.003s 938.205s 08 441 44.384s 0.003s 44.415s 09 3,366 337.325s 0.003s 337.405s 10 258 25.952s 0.002s 25.982s 11 326 32.845s 0.002s 32.876s 12 1,469 147.357s 0.003s 147.438s 13 402 40.478s 0.002s 40.51s 14 910 91.377s 0.004s 91.407s 15 1,052 105.507s 0.003s 105.538s 16 3,706 371.318s 0.004s 371.402s 17 975 97.855s 0.003s 97.887s 18 707 71.013s 0.003s 71.044s 19 643 64.601s 0.003s 64.681s 20 884 88.746s 0.003s 88.777s 21 997 100.076s 0.002s 100.106s 22 1,172 117.614s 0.004s 117.646s 23 974 97.779s 0.004s 97.81s Aug 01 00 1,973 197.874s 0.003s 197.946s 01 660 66.336s 0.002s 66.368s 02 596 59.835s 0.002s 59.914s 03 701 70.441s 0.002s 70.473s 04 318 31.961s 0.002s 31.977s 05 52,796 1,689.307s 0.003s 1,689.484s 06 6,178 618.811s 0.004s 618.898s 07 1,097 110.092s 0.002s 110.135s 08 1,591 159.555s 0.003s 159.587s 09 2,158 216.297s 0.003s 216.376s 10 8,263 827.625s 0.002s 827.715s 11 434 43.566s 0.002s 43.596s 12 323 32.543s 0.002s 32.573s 13 4,027 403.266s 0.003s 403.312s 14 1,061 106.511s 0.003s 106.543s 15 585 58.799s 0.002s 58.83s 16 540 54.296s 0.002s 54.326s 17 350 35.245s 0.002s 35.276s 18 384 38.663s 0.002s 38.694s 19 429 43.171s 0.003s 43.201s 20 487 48.975s 0.002s 49.008s 21 439 44.156s 0.002s 44.188s 22 326 32.844s 0.002s 32.876s 23 435 43.754s 0.002s 43.784s Aug 02 00 960 96.376s 0.004s 96.461s 01 351 35.356s 0.002s 35.386s 02 419 42.197s 0.003s 42.227s 03 330 33.151s 0.002s 33.181s 04 802 80.54s 0.003s 80.57s 05 5,743 575.385s 0.003s 575.47s 06 952 95.586s 0.002s 95.617s 07 825 82.849s 0.003s 82.88s 08 489 49.172s 0.002s 49.205s 09 459 46.183s 0.002s 46.263s 10 875 87.774s 0.003s 87.805s 11 594 59.722s 0.003s 59.754s 12 478 48.077s 0.002s 48.107s 13 825 82.849s 0.003s 82.882s 14 788 79.126s 0.004s 79.158s 15 438 44.082s 0.002s 44.161s 16 589 59.198s 0.003s 59.23s 17 439 44.187s 0.002s 44.218s 18 511 51.391s 0.003s 51.421s 19 322 32.436s 0.002s 32.466s 20 277 27.931s 0.002s 27.963s 21 294 29.64s 0.002s 29.671s 22 1,591 159.593s 0.003s 159.624s 23 261 26.342s 0.002s 26.374s Aug 03 00 839 84.252s 0.003s 84.286s 01 240 24.03s 0.002s 24.061s 02 307 30.938s 0.002s 30.97s 03 206 20.737s 0.001s 20.752s 04 57,937 1,857.523s 0.005s 1,857.774s 05 1,584 158.923s 0.004s 158.955s 06 945 94.897s 0.003s 94.929s 07 1,052 105.491s 0.003s 105.523s 08 526 52.88s 0.002s 52.911s 09 4,241 424.865s 0.003s 424.912s 10 301 30.337s 0.002s 30.368s 11 242 24.421s 0.002s 24.452s 12 200 20.22s 0.002s 20.25s 13 349 35.154s 0.002s 35.184s 14 300 30.233s 0.002s 30.263s 15 465 46.782s 0.003s 46.813s 16 798 80.149s 0.003s 80.18s 17 199 20.018s 0.002s 20.048s 18 285 28.757s 0.002s 28.789s 19 1,674 167.832s 0.003s 167.863s 20 145,019 1,626.94s 0.003s 1,626.971s 21 196 19.823s 0.003s 19.853s 22 162 16.41s 0.002s 16.44s 23 310 31.242s 0.002s 31.272s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jul 28 00 0 0 1 95 0.001s 0.002s 01 0 0 0 17 0.001s 0.001s 02 0 0 33 66 0.001s 0.003s 03 0 0 0 50 0.001s 0.002s 04 0 0 0 20 0.001s 0.002s 05 0 0 0 29 0.001s 0.002s 06 0 0 35 58 0.001s 0.002s 07 0 0 5 42 0.001s 0.002s 08 0 0 0 29 0.001s 0.002s 09 0 0 34 42 0.001s 0.002s 10 0 0 1 35 0.001s 0.002s 11 0 0 0 31 0.001s 0.002s 12 0 0 0 20 0.001s 0.002s 13 0 0 2 42 0.001s 0.002s 14 0 0 0 44 0.001s 0.002s 15 0 0 0 32 0.001s 0.002s 16 0 0 0 31 0.001s 0.002s 17 0 0 0 72 0.001s 0.002s 18 0 0 0 26 0.001s 0.002s 19 0 0 0 29 0.001s 0.002s 20 0 0 0 20 0.001s 0.002s 21 0 0 0 10 0.001s 0.001s 22 0 0 4 58 0.001s 0.003s 23 0 0 1 35 0.001s 0.002s Jul 29 00 0 0 0 71 0.001s 0.002s 01 0 0 0 57 0.001s 0.002s 02 0 0 0 38 0.001s 0.002s 03 0 0 2 54 0.001s 0.002s 04 0 0 34 53 0.001s 0.002s 05 0 0 33 68 0.001s 0.002s 06 0 0 38 42 0.001s 0.001s 07 0 0 5 232 0.001s 0.003s 08 0 0 0 149 0.001s 0.002s 09 0 0 1 732 0.002s 0.002s 10 0 0 0 30 0.001s 0.001s 11 0 84 1,406 394 0.256s 0.006s 12 0 126 258 156 0.001s 0.002s 13 0 0 577 67 0.001s 0.002s 14 0 0 432 269 0.001s 0.003s 15 0 1 0 101 0.001s 0.002s 16 0 0 0 120 0.001s 0.002s 17 0 0 0 117 0.001s 0.002s 18 0 31 2,153 322 0.081s 0.011s 19 0 0 550 303 0.001s 0.002s 20 0 0 0 71 0.001s 0.003s 21 0 88 2,535 179 0.003s 0.006s 22 0 0 605 142 0.001s 0.002s 23 0 0 571 63 0.001s 0.002s Jul 30 00 0 109 2,863 636 0.242s 0.019s 01 0 0 1,076 185 0.217s 0.004s 02 0 0 84 77 0.001s 0.003s 03 0 268 1,841 517 0.867s 0.017s 04 0 286 9,416 575 0.768s 0.099s 05 0 0 765 216 0.001s 0.002s 06 0 58 15 177 0.051s 0.002s 07 0 0 862 366 0.001s 0.003s 08 0 0 0 70 0.001s 0.001s 09 0 10 0 107 0.001s 0.002s 10 0 10 0 105 0.002s 0.003s 11 0 0 0 145 0.001s 0.002s 12 0 0 0 84 0.001s 0.002s 13 0 1 0 96 0.001s 0.002s 14 0 0 0 111 0.001s 0.002s 15 0 0 0 30 0.001s 0.002s 16 0 0 0 28 0.001s 0.002s 17 0 35 0 119 0.001s 0.001s 18 0 0 0 60 0.001s 0.003s 19 0 7 0 43 0.001s 0.002s 20 0 0 0 23 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 32 0.001s 0.002s 23 0 37 0 54 0.001s 0.002s Jul 31 00 0 0 0 73 0.001s 0.002s 01 0 0 0 36 0.001s 0.002s 02 0 2 0 66 0.001s 0.002s 03 0 0 0 60 0.001s 0.002s 04 0 1 0 42 0.001s 0.002s 05 0 71 0 72 0.001s 0.002s 06 0 0 0 88 0.001s 0.002s 07 0 6 0 121 0.001s 0.002s 08 0 0 0 127 0.001s 0.002s 09 0 1 0 49 0.001s 0.002s 10 0 0 0 42 0.001s 0.002s 11 0 0 0 79 0.001s 0.002s 12 0 1 0 130 0.001s 0.002s 13 0 0 0 118 0.001s 0.002s 14 0 0 0 127 0.001s 0.002s 15 0 0 0 138 0.001s 0.002s 16 0 1 0 146 0.001s 0.002s 17 0 0 0 31 0.001s 0.002s 18 0 0 0 29 0.001s 0.002s 19 0 1 0 23 0.001s 0.002s 20 0 0 0 34 0.001s 0.002s 21 0 0 0 27 0.001s 0.002s 22 0 0 0 25 0.001s 0.002s 23 0 0 0 34 0.001s 0.002s Aug 01 00 0 0 0 92 0.001s 0.002s 01 0 0 0 41 0.001s 0.002s 02 0 1 0 34 0.001s 0.002s 03 0 0 0 34 0.001s 0.002s 04 0 0 0 14 0.001s 0.001s 05 0 28 0 73 0.001s 0.003s 06 0 3 0 99 0.001s 0.002s 07 0 1 0 91 0.001s 0.002s 08 0 0 0 94 0.001s 0.002s 09 0 1 0 47 0.001s 0.002s 10 0 4 0 57 0.001s 0.002s 11 0 0 0 33 0.001s 0.002s 12 0 0 0 28 0.001s 0.002s 13 0 3 0 76 0.001s 0.002s 14 0 0 0 119 0.001s 0.002s 15 0 0 0 114 0.001s 0.002s 16 0 0 0 36 0.001s 0.002s 17 0 0 0 25 0.001s 0.002s 18 0 0 0 28 0.001s 0.002s 19 0 0 0 32 0.001s 0.002s 20 0 0 0 36 0.001s 0.002s 21 0 0 0 23 0.001s 0.002s 22 0 0 0 29 0.001s 0.002s 23 0 0 0 32 0.001s 0.002s Aug 02 00 0 1 0 74 0.001s 0.002s 01 0 0 0 32 0.001s 0.002s 02 0 0 0 36 0.001s 0.002s 03 0 0 0 33 0.001s 0.002s 04 0 0 0 47 0.001s 0.002s 05 0 4 0 47 0.001s 0.002s 06 0 0 0 90 0.001s 0.002s 07 0 0 0 121 0.001s 0.002s 08 0 0 0 79 0.001s 0.002s 09 0 1 0 63 0.001s 0.002s 10 0 0 0 155 0.001s 0.002s 11 0 0 0 72 0.001s 0.002s 12 0 0 0 114 0.001s 0.002s 13 0 0 0 193 0.001s 0.002s 14 0 0 0 106 0.001s 0.002s 15 0 1 0 112 0.001s 0.002s 16 0 0 0 126 0.001s 0.002s 17 0 0 0 63 0.001s 0.002s 18 0 0 0 32 0.001s 0.002s 19 0 0 0 24 0.001s 0.002s 20 0 0 0 22 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 27 0.001s 0.002s 23 0 0 0 21 0.001s 0.002s Aug 03 00 0 0 0 74 0.001s 0.002s 01 0 0 0 26 0.001s 0.002s 02 0 0 0 30 0.001s 0.002s 03 0 0 0 16 0.001s 0.001s 04 0 34 0 82 0.001s 0.003s 05 0 0 0 33 0.001s 0.002s 06 0 0 0 43 0.001s 0.002s 07 0 0 0 40 0.001s 0.002s 08 0 0 0 30 0.001s 0.002s 09 0 3 0 31 0.001s 0.002s 10 0 0 0 30 0.001s 0.002s 11 0 0 0 28 0.001s 0.002s 12 0 0 0 19 0.001s 0.002s 13 0 0 0 35 0.001s 0.002s 14 0 0 0 35 0.001s 0.002s 15 0 0 0 31 0.001s 0.002s 16 0 0 0 22 0.001s 0.002s 17 0 0 0 23 0.001s 0.002s 18 0 0 0 36 0.001s 0.002s 19 0 0 0 21 0.001s 0.002s 20 0 0 0 23 0.001s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 0 0 32 0.001s 0.002s Day Hour Count Avg time (sec) Jul 28 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 29 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 30 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jul 31 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 01 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 02 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Aug 03 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jul 28 00 3,281.00 kB 6,833.50 kB 01 363.00 kB 5,984.00 kB 02 181,932.33 kB 492,401.67 kB 03 1,194.50 kB 377,695.00 kB 04 133.00 kB 306,023.50 kB 05 311.00 kB 247,936.50 kB 06 24,919.50 kB 203,481.50 kB 07 300,518.00 kB 570,550.50 kB 08 379.50 kB 462,230.00 kB 09 275,299.00 kB 522,932.00 kB 10 6,697.00 kB 424,834.00 kB 11 441.50 kB 344,189.50 kB 12 183.00 kB 278,850.00 kB 13 15,487.50 kB 228,791.00 kB 14 765.00 kB 185,456.00 kB 15 466.50 kB 150,335.50 kB 16 881.50 kB 121,937.50 kB 17 754.50 kB 98,911.50 kB 18 242.50 kB 80,167.50 kB 19 491.50 kB 65,006.50 kB 20 256.50 kB 52,725.50 kB 21 266.00 kB 44,994.00 kB 22 22,305.33 kB 59,543.33 kB 23 3,080.50 kB 46,275.50 kB Jul 29 00 3,898.50 kB 38,165.50 kB 01 3,572.00 kB 31,359.50 kB 02 494.00 kB 25,777.50 kB 03 5,850.00 kB 21,509.00 kB 04 25,953.00 kB 32,737.00 kB 05 316,213.00 kB 548,165.50 kB 06 517,884.00 kB 521,942.00 kB 07 204,021.00 kB 549,714.67 kB 08 2,116.50 kB 421,887.00 kB 09 8,690.00 kB 343,406.00 kB 10 375.00 kB 292,943.00 kB 11 4,882,255.80 kB 6,431,600.80 kB 12 2,884,409.00 kB 7,093,452.50 kB 13 4,990,105.50 kB 8,423,617.00 kB 14 2,354,484.00 kB 7,176,199.00 kB 15 11,233.00 kB 5,503,544.50 kB 16 1,242.00 kB 4,458,446.00 kB 17 1,533.00 kB 3,611,632.50 kB 18 8,811,811.50 kB 8,813,358.00 kB 19 4,772,972.50 kB 8,422,397.50 kB 20 728.00 kB 6,517,908.33 kB 21 7,097,768.50 kB 7,976,377.50 kB 22 5,144,110.50 kB 8,459,946.50 kB 23 4,414,651.00 kB 8,055,673.50 kB Jul 30 00 8,115,678.50 kB 8,772,972.67 kB 01 8,817,248.00 kB 8,836,592.00 kB 02 632,782.33 kB 7,354,884.33 kB 03 6,805,429.00 kB 7,822,863.20 kB 04 8,830,890.56 kB 8,957,821.11 kB 05 6,271,416.00 kB 8,673,313.00 kB 06 601,031.50 kB 7,296,057.00 kB 07 4,880,489.33 kB 8,323,816.00 kB 08 1,657.00 kB 6,892,065.00 kB 09 80,822.50 kB 5,907,460.50 kB 10 53,157.00 kB 4,564,927.33 kB 11 2,202.00 kB 3,500,164.50 kB 12 1,088.00 kB 2,835,383.50 kB 13 6,553.50 kB 2,297,890.00 kB 14 720.50 kB 1,861,425.00 kB 15 534.50 kB 1,507,850.00 kB 16 499.50 kB 1,221,458.00 kB 17 54,276.00 kB 1,046,913.00 kB 18 173,436.67 kB 898,115.00 kB 19 52,151.50 kB 693,836.00 kB 20 386.50 kB 566,715.50 kB 21 475.50 kB 459,120.50 kB 22 683.00 kB 372,025.50 kB 23 301,013.50 kB 518,896.00 kB Jul 31 00 3,358.50 kB 423,433.00 kB 01 363.50 kB 343,195.50 kB 02 14,750.00 kB 280,420.00 kB 03 3,710.00 kB 227,960.00 kB 04 2,176.50 kB 185,324.50 kB 05 576,146.00 kB 1,041,623.50 kB 06 10,343.50 kB 847,976.50 kB 07 44,591.00 kB 695,636.50 kB 08 1,209.50 kB 563,710.50 kB 09 10,805.00 kB 458,666.50 kB 10 537.50 kB 371,614.00 kB 11 848.00 kB 301,141.50 kB 12 4,594.50 kB 244,829.00 kB 13 807.50 kB 198,475.50 kB 14 2,153.50 kB 161,126.50 kB 15 1,443.00 kB 130,768.50 kB 16 8,812.50 kB 107,577.00 kB 17 496.50 kB 87,303.00 kB 18 283.50 kB 70,795.50 kB 19 306.00 kB 57,403.50 kB 20 763.00 kB 46,629.50 kB 21 597.00 kB 37,882.50 kB 22 666.50 kB 30,803.00 kB 23 824.00 kB 25,114.50 kB Aug 01 00 4,654.50 kB 21,070.00 kB 01 475.50 kB 17,316.00 kB 02 315.50 kB 14,102.00 kB 03 579.50 kB 11,511.50 kB 04 196.00 kB 9,864.00 kB 05 154,548.33 kB 417,622.00 kB 06 29,412.00 kB 323,246.50 kB 07 2,040.50 kB 264,738.50 kB 08 4,855.00 kB 215,389.50 kB 09 8,536.50 kB 175,362.00 kB 10 28,329.00 kB 145,667.00 kB 11 500.50 kB 120,567.00 kB 12 249.50 kB 97,728.50 kB 13 24,154.50 kB 81,597.00 kB 14 953.50 kB 68,397.00 kB 15 693.50 kB 55,535.00 kB 16 502.00 kB 45,086.50 kB 17 239.50 kB 36,585.50 kB 18 240.00 kB 29,681.00 kB 19 523.00 kB 24,115.00 kB 20 489.00 kB 19,632.00 kB 21 249.50 kB 15,968.50 kB 22 267.00 kB 12,985.00 kB 23 530.50 kB 10,599.00 kB Aug 02 00 2,230.50 kB 8,960.50 kB 01 351.50 kB 7,389.00 kB 02 398.50 kB 6,058.00 kB 03 265.00 kB 4,972.00 kB 04 1,743.00 kB 4,226.00 kB 05 28,240.00 kB 29,897.00 kB 06 1,474.00 kB 48,055.50 kB 07 1,239.00 kB 39,216.50 kB 08 639.00 kB 31,907.00 kB 09 6,877.00 kB 26,571.50 kB 10 1,789.50 kB 22,410.50 kB 11 1,047.00 kB 18,373.00 kB 12 766.50 kB 15,033.50 kB 13 1,668.50 kB 12,452.00 kB 14 467.00 kB 10,226.00 kB 15 679.50 kB 8,401.00 kB 16 1,235.50 kB 7,024.50 kB 17 529.00 kB 5,832.00 kB 18 567.50 kB 4,797.00 kB 19 253.50 kB 3,964.50 kB 20 172.00 kB 3,247.00 kB 21 212.50 kB 2,670.50 kB 22 745.50 kB 2,257.50 kB 23 199.50 kB 1,914.50 kB Aug 03 00 2,064.00 kB 2,567.00 kB 01 178.50 kB 2,179.00 kB 02 311.50 kB 1,822.00 kB 03 363.00 kB 1,594.00 kB 04 183,793.67 kB 489,898.67 kB 05 574.50 kB 376,201.50 kB 06 842.50 kB 304,874.50 kB 07 671.50 kB 247,083.50 kB 08 444.50 kB 200,221.50 kB 09 19,017.50 kB 164,123.00 kB 10 402.00 kB 134,710.50 kB 11 359.50 kB 109,183.50 kB 12 165.50 kB 88,469.00 kB 13 823.00 kB 71,757.00 kB 14 408.50 kB 58,241.50 kB 15 650.00 kB 47,278.50 kB 16 196.50 kB 38,372.50 kB 17 275.00 kB 31,133.50 kB 18 398.50 kB 25,274.00 kB 19 189.00 kB 20,528.50 kB 20 193.50 kB 16,663.50 kB 21 210.00 kB 13,537.00 kB 22 204.50 kB 11,003.50 kB 23 464.50 kB 9,000.00 kB -
Temporary Files
Size of temporary files
Key values
- 16.00 GiB Temp Files size Peak
- 2024-07-29 21:29:47 Date
Number of temporary files
Key values
- 21 per second Temp Files Peak
- 2024-07-30 03:59:05 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jul 28 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 29 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 240 2.14 GiB 9.14 MiB 11 566 23.15 GiB 41.88 MiB 12 202 18.16 GiB 92.04 MiB 13 115 5.22 GiB 46.45 MiB 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 72 70.28 GiB 999.59 MiB 21 223 156.76 GiB 719.84 MiB 22 110 18.81 GiB 175.10 MiB 23 210 17.07 GiB 83.23 MiB Jul 30 00 131 29.90 GiB 233.75 MiB 01 0 0 0 02 0 0 0 03 435 19.60 GiB 46.13 MiB 04 544 132.31 GiB 249.05 MiB 05 0 0 0 06 0 0 0 07 8 7.88 GiB 1008.67 MiB 08 0 0 0 09 0 0 0 10 0 0 0 11 41 40.16 GiB 1003.12 MiB 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jul 31 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 01 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 02 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Aug 03 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 1,193 67.35 GiB 8.00 KiB 1.00 GiB 57.81 MiB select * from pgbulkload.pg_bulkload (?);-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-07-29 21:40:57 Duration: 6m28s Database: ctdprd51 User: load Application: pg_bulkload
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-07-29 22:08:36 Duration: 5m16s
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-07-29 11:07:28 Duration: 3m49s
2 897 149.24 GiB 128.00 KiB 1.00 GiB 170.37 MiB vacuum full analyze;-
VACUUM FULL ANALYZE;
Date: 2024-07-30 04:38:03 Duration: 46m8s
-
VACUUM FULL ANALYZE;
Date: 2024-07-30 03:52:03 Duration: 0ms
3 67 66.70 GiB 716.64 MiB 1.00 GiB 1019.41 MiB select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.object_type where cd = ?), ( select current_date) from pub1.gene_chem_reference gcr, pub1.gene_go_annot gga, pub1.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;-
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.GENE_GO_ANNOT gga, pub1.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;
Date: 2024-07-29 21:29:44 Duration: 0ms
4 62 1.97 GiB 7.02 MiB 1.00 GiB 32.60 MiB cluster pub1.term;-
CLUSTER pub1.TERM;
Date: 2024-07-30 03:51:16 Duration: 1m2s
-
CLUSTER pub1.TERM;
Date: 2024-07-30 03:50:24 Duration: 0ms
5 47 46.24 GiB 245.62 MiB 1.00 GiB 1007.44 MiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.object_type where cd = ?), ptr.term_id, ( select id from pub1.object_type where cd = ?), ( select current_date) from pub1.gene_chem_reference gcr, pub1.phenotype_term_reference ptr, pub1.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;-
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub1.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.PHENOTYPE_TERM_REFERENCE ptr, pub1.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;
Date: 2024-07-29 20:49:39 Duration: 0ms
6 41 40.16 GiB 168.05 MiB 1.00 GiB 1003.12 MiB select ;-
SELECT /* AllGDRelationsDAO */ ;
Date: 2024-07-30 11:29:42 Duration: 0ms
7 35 1.10 GiB 22.73 MiB 46.21 MiB 32.33 MiB vacuum full analyze ixn_actor;-
vacuum FULL analyze ixn_actor;
Date: 2024-07-29 13:48:09 Duration: 23s381ms
-
vacuum FULL analyze ixn_actor;
Date: 2024-07-29 13:47:52 Duration: 0ms
8 35 3.55 GiB 56.23 MiB 138.44 MiB 103.76 MiB vacuum full analyze db_link;-
vacuum FULL analyze db_link;
Date: 2024-07-29 13:50:12 Duration: 1m34s
-
vacuum FULL analyze db_link;
Date: 2024-07-29 13:48:55 Duration: 0ms
9 25 24.04 GiB 44.87 MiB 1.00 GiB 984.83 MiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub1.gene_chem_reference gcr, pub1.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;
Date: 2024-07-29 20:08:35 Duration: 0ms
10 25 363.28 MiB 11.14 MiB 18.26 MiB 14.53 MiB vacuum full analyze ixn;-
vacuum FULL analyze ixn;
Date: 2024-07-29 13:48:24 Duration: 7s388ms
-
vacuum FULL analyze ixn;
Date: 2024-07-29 13:48:20 Duration: 0ms
11 25 15.74 GiB 8.00 KiB 1.00 GiB 644.89 MiB alter table pub1.term_enrichment_agent add constraint term_enrichment_agent_pk primary key (term_id, enriched_term_id, agent_term_id);-
ALTER TABLE pub1.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2024-07-30 00:12:39 Duration: 2m57s
-
ALTER TABLE pub1.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2024-07-30 00:12:37 Duration: 0ms
12 20 709.62 MiB 21.41 MiB 64.80 MiB 35.48 MiB cluster pub1.term_label;-
CLUSTER pub1.TERM_LABEL;
Date: 2024-07-30 03:51:52 Duration: 35s900ms
-
CLUSTER pub1.TERM_LABEL;
Date: 2024-07-30 03:51:22 Duration: 0ms
13 20 215.27 MiB 6.22 MiB 18.17 MiB 10.76 MiB vacuum full analyze term;-
vacuum FULL analyze TERM;
Date: 2024-07-29 13:48:06 Duration: 10s403ms
-
vacuum FULL analyze TERM;
Date: 2024-07-29 13:47:58 Duration: 0ms
14 20 12.34 GiB 8.00 KiB 1.00 GiB 631.61 MiB create unique index gene_disease_reference_ak1 on pub1.gene_disease_reference using btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub1.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2024-07-29 21:46:22 Duration: 3m2s
-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub1.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2024-07-29 21:46:21 Duration: 0ms
15 15 6.85 GiB 8.00 KiB 1.00 GiB 467.86 MiB alter table pub1.gene_disease_reference add constraint gene_disease_reference_pk primary key (id);-
ALTER TABLE pub1.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2024-07-29 21:43:20 Duration: 1m11s
-
ALTER TABLE pub1.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2024-07-29 21:43:20 Duration: 0ms Database: ctdprd51 User: pub1
16 15 11.25 GiB 229.25 MiB 1.00 GiB 767.72 MiB create index ix_term_enrich_agent_enr_term on pub1.term_enrichment_agent using btree (enriched_term_id);-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub1.term_enrichment_agent USING btree (enriched_term_id);
Date: 2024-07-30 00:14:22 Duration: 1m43s
-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub1.term_enrichment_agent USING btree (enriched_term_id);
Date: 2024-07-30 00:14:21 Duration: 0ms
17 10 241.75 MiB 8.00 KiB 48.57 MiB 24.18 MiB alter table pub1.chem_disease_reference add constraint chem_disease_reference_pk primary key (id);-
ALTER TABLE pub1.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2024-07-29 22:01:18 Duration: 2s313ms
-
ALTER TABLE pub1.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2024-07-29 22:01:18 Duration: 0ms
18 10 6.85 GiB 291.27 MiB 1.00 GiB 701.78 MiB create index ix_gene_disease_ref_chem on pub1.gene_disease_reference using btree (via_chem_id);-
CREATE INDEX ix_gene_disease_ref_chem ON pub1.gene_disease_reference USING btree (via_chem_id);
Date: 2024-07-29 21:49:39 Duration: 1m29s
-
CREATE INDEX ix_gene_disease_ref_chem ON pub1.gene_disease_reference USING btree (via_chem_id);
Date: 2024-07-29 21:49:39 Duration: 0ms
19 10 6.85 GiB 311.53 MiB 1.00 GiB 701.78 MiB create index ix_gene_disease_ref_mod_tm on pub1.gene_disease_reference using btree (mod_tm);-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub1.gene_disease_reference USING btree (mod_tm);
Date: 2024-07-29 21:56:53 Duration: 1m24s
-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub1.gene_disease_reference USING btree (mod_tm);
Date: 2024-07-29 21:56:52 Duration: 0ms
20 10 6.85 GiB 322.98 MiB 1.00 GiB 701.79 MiB create index ix_gene_disease_ref_dis_gene on pub1.gene_disease_reference using btree (disease_id, gene_id);-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub1.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2024-07-29 21:54:06 Duration: 1m46s
-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub1.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2024-07-29 21:54:06 Duration: 0ms
21 10 6.85 GiB 199.07 MiB 1.00 GiB 701.78 MiB create index ix_gene_disease_ref_source_cd on pub1.gene_disease_reference using btree (source_cd);-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub1.gene_disease_reference USING btree (source_cd);
Date: 2024-07-29 21:48:10 Duration: 1m
-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub1.gene_disease_reference USING btree (source_cd);
Date: 2024-07-29 21:48:10 Duration: 0ms
22 10 440.38 MiB 8.00 KiB 92.01 MiB 44.04 MiB create unique index chem_disease_reference_ak1 on pub1.chem_disease_reference using btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub1.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2024-07-29 22:01:24 Duration: 6s57ms
-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub1.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2024-07-29 22:01:24 Duration: 0ms
23 10 1021.34 MiB 8.00 KiB 206.42 MiB 102.13 MiB alter table pub1.phenotype_term_reference add constraint phenotype_term_reference_pk primary key (id);-
ALTER TABLE pub1.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2024-07-29 21:59:26 Duration: 12s160ms
-
ALTER TABLE pub1.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2024-07-29 21:59:25 Duration: 0ms
24 10 6.85 GiB 340.62 MiB 1.00 GiB 701.78 MiB create index ix_gene_disease_reference_ixn on pub1.gene_disease_reference using btree (ixn_id);-
CREATE INDEX ix_gene_disease_reference_ixn ON pub1.gene_disease_reference USING btree (ixn_id);
Date: 2024-07-29 21:55:28 Duration: 1m22s
-
CREATE INDEX ix_gene_disease_reference_ixn ON pub1.gene_disease_reference USING btree (ixn_id);
Date: 2024-07-29 21:55:28 Duration: 0ms
25 10 6.85 GiB 309.99 MiB 1.00 GiB 701.78 MiB create index ix_gene_disease_ref_reference on pub1.gene_disease_reference using btree (reference_id);-
CREATE INDEX ix_gene_disease_ref_reference ON pub1.gene_disease_reference USING btree (reference_id);
Date: 2024-07-29 21:52:20 Duration: 1m16s
-
CREATE INDEX ix_gene_disease_ref_reference ON pub1.gene_disease_reference USING btree (reference_id);
Date: 2024-07-29 21:52:20 Duration: 0ms
26 10 156.91 MiB 8.00 KiB 32.65 MiB 15.69 MiB alter table pub1.term_enrichment add constraint term_enrichment_pk primary key (term_id, enriched_term_id);-
ALTER TABLE pub1.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2024-07-29 23:56:56 Duration: 2s84ms
-
ALTER TABLE pub1.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2024-07-29 23:56:56 Duration: 0ms Database: ctdprd51 User: pub1
27 10 62.88 MiB 8.00 KiB 13.07 MiB 6.29 MiB alter table pub1.phenotype_term add constraint phenotype_term_pk primary key (phenotype_id, term_id);-
ALTER TABLE pub1.phenotype_term ADD CONSTRAINT phenotype_term_pk PRIMARY KEY (phenotype_id, term_id);
Date: 2024-07-30 00:28:58 Duration: 0ms
28 10 6.85 GiB 344.43 MiB 1.00 GiB 701.79 MiB create index ix_gene_disease_ref_src_db on pub1.gene_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_gene_disease_ref_src_db ON pub1.gene_disease_reference USING btree (source_acc_db_id);
Date: 2024-07-29 21:47:10 Duration: 47s487ms
-
CREATE INDEX ix_gene_disease_ref_src_db ON pub1.gene_disease_reference USING btree (source_acc_db_id);
Date: 2024-07-29 21:47:09 Duration: 0ms
29 10 6.85 GiB 312.40 MiB 1.00 GiB 701.79 MiB create index ix_gene_disease_ref_disease on pub1.gene_disease_reference using btree (disease_id);-
CREATE INDEX ix_gene_disease_ref_disease ON pub1.gene_disease_reference USING btree (disease_id);
Date: 2024-07-29 21:51:03 Duration: 1m23s
-
CREATE INDEX ix_gene_disease_ref_disease ON pub1.gene_disease_reference USING btree (disease_id);
Date: 2024-07-29 21:51:03 Duration: 0ms
30 10 6.85 GiB 294.01 MiB 1.00 GiB 701.79 MiB create index ix_gene_disease_ref_net_sc on pub1.gene_disease_reference using btree (network_score);-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub1.gene_disease_reference USING btree (network_score);
Date: 2024-07-29 21:59:14 Duration: 2m21s
-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub1.gene_disease_reference USING btree (network_score);
Date: 2024-07-29 21:59:14 Duration: 0ms
31 10 628.32 MiB 8.00 KiB 126.67 MiB 62.83 MiB alter table pub1.gene_disease add constraint gene_disease_pk primary key (gene_id, disease_id);-
ALTER TABLE pub1.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2024-07-30 00:28:28 Duration: 6s305ms
-
ALTER TABLE pub1.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2024-07-30 00:28:28 Duration: 0ms Database: ctdprd51 User: pub1
32 8 7.88 GiB 901.34 MiB 1.00 GiB 1008.67 MiB select pub1.maint_cached_value_refresh_data_metrics ();-
select pub1.maint_cached_value_refresh_data_metrics ();
Date: 2024-07-30 07:20:43 Duration: 33m42s
-
select pub1.maint_cached_value_refresh_data_metrics ();
Date: 2024-07-30 07:16:29 Duration: 0ms
33 8 63.69 MiB 8.00 KiB 17.13 MiB 7.96 MiB alter table pub1.chem_disease add constraint chem_disease_pk primary key (chem_id, disease_id);-
ALTER TABLE pub1.chem_disease ADD CONSTRAINT chem_disease_pk PRIMARY KEY (chem_id, disease_id);
Date: 2024-07-30 00:29:01 Duration: 0ms
34 6 5.20 GiB 208.16 MiB 1.00 GiB 888.03 MiB select distinct ptr.phenotype_id, cdr.disease_id, ( select id from pub1.object_type where cd = ?), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub1.object_type where cd = ?), cdr.mod_tm from pub1.chem_disease_reference cdr, pub1.phenotype_term_reference ptr where cdr.chem_id = ptr.term_id;-
SELECT DISTINCT ptr.phenotype_id, cdr.disease_id, ( select id from pub1.OBJECT_TYPE where cd = 'disease'), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub1.OBJECT_TYPE where cd = 'chem'), cdr.mod_tm FROM pub1.CHEM_DISEASE_REFERENCE cdr, pub1.PHENOTYPE_TERM_REFERENCE ptr WHERE cdr.chem_id = ptr.term_id;
Date: 2024-07-29 21:33:32 Duration: 0ms
35 5 241.70 MiB 46.40 MiB 49.16 MiB 48.34 MiB create index ix_chem_disease_reference_ref on pub1.chem_disease_reference using btree (reference_id);-
CREATE INDEX ix_chem_disease_reference_ref ON pub1.chem_disease_reference USING btree (reference_id);
Date: 2024-07-29 22:01:30 Duration: 2s707ms
-
CREATE INDEX ix_chem_disease_reference_ref ON pub1.chem_disease_reference USING btree (reference_id);
Date: 2024-07-29 22:01:30 Duration: 0ms
36 5 1021.30 MiB 200.81 MiB 206.77 MiB 204.26 MiB create index ix_phenotype_term_ref_evidence_cd on pub1.phenotype_term_reference using btree (evidence_cd);-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub1.phenotype_term_reference USING btree (evidence_cd);
Date: 2024-07-29 22:00:21 Duration: 8s843ms
-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub1.phenotype_term_reference USING btree (evidence_cd);
Date: 2024-07-29 22:00:21 Duration: 0ms
37 5 1021.30 MiB 191.59 MiB 214.72 MiB 204.26 MiB create index ix_phenotype_term_reference_term_reference_id on pub1.phenotype_term_reference using btree (term_reference_id);-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub1.phenotype_term_reference USING btree (term_reference_id);
Date: 2024-07-29 22:00:40 Duration: 10s802ms
-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub1.phenotype_term_reference USING btree (term_reference_id);
Date: 2024-07-29 22:00:40 Duration: 0ms
38 5 62.85 MiB 11.84 MiB 13.30 MiB 12.57 MiB create index ix_phenotype_term_phenotype_id on pub1.phenotype_term using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_phenotype_id ON pub1.phenotype_term USING btree (phenotype_id);
Date: 2024-07-30 00:28:59 Duration: 0ms
39 5 1021.30 MiB 191.08 MiB 213.43 MiB 204.26 MiB create index ixn_phenotype_term_ref_phenotype_id on pub1.phenotype_term_reference using btree (phenotype_id);-
CREATE INDEX ixn_phenotype_term_ref_phenotype_id ON pub1.phenotype_term_reference USING btree (phenotype_id);
Date: 2024-07-29 21:59:35 Duration: 9s73ms
-
CREATE INDEX ixn_phenotype_term_ref_phenotype_id ON pub1.phenotype_term_reference USING btree (phenotype_id);
Date: 2024-07-29 21:59:35 Duration: 0ms
40 5 219.02 MiB 41.68 MiB 46.21 MiB 43.80 MiB create index ix_term_enrich_raw_p_val on pub1.term_enrichment using btree (raw_p_val);-
CREATE INDEX ix_term_enrich_raw_p_val ON pub1.term_enrichment USING btree (raw_p_val);
Date: 2024-07-29 23:57:10 Duration: 4s774ms
-
CREATE INDEX ix_term_enrich_raw_p_val ON pub1.term_enrichment USING btree (raw_p_val);
Date: 2024-07-29 23:57:10 Duration: 0ms
41 5 628.29 MiB 119.99 MiB 129.85 MiB 125.66 MiB create index ix_gene_disease_disease on pub1.gene_disease using btree (disease_id);-
CREATE INDEX ix_gene_disease_disease ON pub1.gene_disease USING btree (disease_id);
Date: 2024-07-30 00:28:50 Duration: 6s853ms
-
CREATE INDEX ix_gene_disease_disease ON pub1.gene_disease USING btree (disease_id);
Date: 2024-07-30 00:28:50 Duration: 0ms
42 5 688.00 KiB 120.00 KiB 152.00 KiB 137.60 KiB create index ix_gene_disease_cur_ref_qty on pub1.gene_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_gene_disease_cur_ref_qty ON pub1.gene_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2024-07-30 00:28:50 Duration: 0ms
43 5 1021.30 MiB 200.98 MiB 210.52 MiB 204.26 MiB create index ix_phenotype_term_ref_object_type_id on pub1.phenotype_term_reference using btree (term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub1.phenotype_term_reference USING btree (term_object_type_id);
Date: 2024-07-29 21:59:53 Duration: 8s508ms
-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub1.phenotype_term_reference USING btree (term_object_type_id);
Date: 2024-07-29 21:59:53 Duration: 0ms
44 5 1021.29 MiB 200.20 MiB 206.88 MiB 204.26 MiB create index ix_phenotype_term_ref_taxon_id on pub1.phenotype_term_reference using btree (taxon_id);-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub1.phenotype_term_reference USING btree (taxon_id);
Date: 2024-07-29 22:00:12 Duration: 8s428ms
-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub1.phenotype_term_reference USING btree (taxon_id);
Date: 2024-07-29 22:00:12 Duration: 0ms
45 5 241.71 MiB 45.43 MiB 51.02 MiB 48.34 MiB create index ix_chem_disease_ref_src_db on pub1.chem_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_chem_disease_ref_src_db ON pub1.chem_disease_reference USING btree (source_acc_db_id);
Date: 2024-07-29 22:01:34 Duration: 1s918ms
-
CREATE INDEX ix_chem_disease_ref_src_db ON pub1.chem_disease_reference USING btree (source_acc_db_id);
Date: 2024-07-29 22:01:34 Duration: 0ms
46 5 241.71 MiB 46.18 MiB 50.85 MiB 48.34 MiB create index ix_chem_disease_ref_mod_tm on pub1.chem_disease_reference using btree (mod_tm);-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub1.chem_disease_reference USING btree (mod_tm);
Date: 2024-07-29 22:01:43 Duration: 2s795ms
-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub1.chem_disease_reference USING btree (mod_tm);
Date: 2024-07-29 22:01:43 Duration: 0ms
47 5 156.88 MiB 29.34 MiB 33.24 MiB 31.38 MiB create index ix_term_enrich_tgt_match on pub1.term_enrichment using btree (target_match_qty);-
CREATE INDEX ix_term_enrich_tgt_match ON pub1.term_enrichment USING btree (target_match_qty);
Date: 2024-07-29 23:56:59 Duration: 1s796ms
-
CREATE INDEX ix_term_enrich_tgt_match ON pub1.term_enrichment USING btree (target_match_qty);
Date: 2024-07-29 23:56:59 Duration: 0ms
48 5 62.85 MiB 11.77 MiB 13.07 MiB 12.57 MiB create index ix_phenotype_term_term_id on pub1.phenotype_term using btree (term_id);-
CREATE INDEX ix_phenotype_term_term_id ON pub1.phenotype_term USING btree (term_id);
Date: 2024-07-30 00:29:00 Duration: 0ms
49 5 1021.30 MiB 194.49 MiB 212.05 MiB 204.26 MiB create index ix_phenotype_term_reference_ixn_id on pub1.phenotype_term_reference using btree (ixn_id);-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub1.phenotype_term_reference USING btree (ixn_id);
Date: 2024-07-29 22:00:50 Duration: 10s605ms
-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub1.phenotype_term_reference USING btree (ixn_id);
Date: 2024-07-29 22:00:50 Duration: 0ms
50 5 628.15 MiB 123.73 MiB 126.45 MiB 125.63 MiB create index ix_gene_disease_ind_chem_qty on pub1.gene_disease using btree (indirect_chem_qty) where (indirect_chem_qty > ?);-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub1.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2024-07-30 00:28:57 Duration: 6s654ms
-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub1.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2024-07-30 00:28:57 Duration: 0ms
51 5 1.40 GiB 281.70 MiB 300.76 MiB 286.65 MiB create index ix_phenotype_term_ref_ids on pub1.phenotype_term_reference using btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_ids ON pub1.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2024-07-29 22:01:16 Duration: 14s375ms
-
CREATE INDEX ix_phenotype_term_ref_ids ON pub1.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2024-07-29 22:01:16 Duration: 0ms
52 5 40.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_gene_disease_exp_ref_qty on pub1.gene_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_gene_disease_exp_ref_qty ON pub1.gene_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2024-07-30 00:28:58 Duration: 0ms
53 5 156.86 MiB 29.09 MiB 32.91 MiB 31.37 MiB create index ix_term_enrich_enr_obj_type on pub1.term_enrichment using btree (enriched_object_type_id);-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub1.term_enrichment USING btree (enriched_object_type_id);
Date: 2024-07-29 23:57:01 Duration: 1s237ms
-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub1.term_enrichment USING btree (enriched_object_type_id);
Date: 2024-07-29 23:57:01 Duration: 0ms
54 5 1021.30 MiB 193.11 MiB 215.15 MiB 204.26 MiB create index ix_phenotype_term_ref_reference_id on pub1.phenotype_term_reference using btree (reference_id);-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub1.phenotype_term_reference USING btree (reference_id);
Date: 2024-07-29 22:00:04 Duration: 10s579ms
-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub1.phenotype_term_reference USING btree (reference_id);
Date: 2024-07-29 22:00:04 Duration: 0ms
55 5 241.70 MiB 45.12 MiB 50.99 MiB 48.34 MiB create index ix_chem_disease_reference_gene on pub1.chem_disease_reference using btree (via_gene_id);-
CREATE INDEX ix_chem_disease_reference_gene ON pub1.chem_disease_reference USING btree (via_gene_id);
Date: 2024-07-29 22:01:37 Duration: 2s813ms
-
CREATE INDEX ix_chem_disease_reference_gene ON pub1.chem_disease_reference USING btree (via_gene_id);
Date: 2024-07-29 22:01:37 Duration: 0ms
56 5 219.02 MiB 42.63 MiB 45.86 MiB 43.80 MiB create index ix_term_enrich_corr_p_val on pub1.term_enrichment using btree (corrected_p_val);-
CREATE INDEX ix_term_enrich_corr_p_val ON pub1.term_enrichment USING btree (corrected_p_val);
Date: 2024-07-29 23:57:05 Duration: 4s635ms
-
CREATE INDEX ix_term_enrich_corr_p_val ON pub1.term_enrichment USING btree (corrected_p_val);
Date: 2024-07-29 23:57:05 Duration: 0ms
57 5 1021.30 MiB 201.89 MiB 208.89 MiB 204.26 MiB create index ix_phenotype_term_ref_via_term_id on pub1.phenotype_term_reference using btree (via_term_id);-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub1.phenotype_term_reference USING btree (via_term_id);
Date: 2024-07-29 22:01:01 Duration: 10s956ms
-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub1.phenotype_term_reference USING btree (via_term_id);
Date: 2024-07-29 22:01:01 Duration: 0ms
58 5 1021.30 MiB 200.64 MiB 206.41 MiB 204.26 MiB create index ix_phenotype_term_reference_source_acc_db_id on pub1.phenotype_term_reference using btree (source_acc_db_id);-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub1.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2024-07-29 22:00:29 Duration: 7s682ms
-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub1.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2024-07-29 22:00:29 Duration: 0ms
59 5 241.71 MiB 45.44 MiB 50.70 MiB 48.34 MiB create index ix_chem_disease_ref_source_cd on pub1.chem_disease_reference using btree (source_cd);-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub1.chem_disease_reference USING btree (source_cd);
Date: 2024-07-29 22:01:32 Duration: 2s849ms
-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub1.chem_disease_reference USING btree (source_cd);
Date: 2024-07-29 22:01:32 Duration: 0ms
60 5 241.71 MiB 47.66 MiB 48.95 MiB 48.34 MiB create index ix_chem_disease_ref_net_sc on pub1.chem_disease_reference using btree (network_score);-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub1.chem_disease_reference USING btree (network_score);
Date: 2024-07-29 22:01:48 Duration: 4s996ms
-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub1.chem_disease_reference USING btree (network_score);
Date: 2024-07-29 22:01:48 Duration: 0ms
61 5 241.71 MiB 44.87 MiB 50.30 MiB 48.34 MiB create index ix_chem_disease_reference_ixn on pub1.chem_disease_reference using btree (ixn_id);-
CREATE INDEX ix_chem_disease_reference_ixn ON pub1.chem_disease_reference USING btree (ixn_id);
Date: 2024-07-29 22:01:40 Duration: 2s798ms
-
CREATE INDEX ix_chem_disease_reference_ixn ON pub1.chem_disease_reference USING btree (ixn_id);
Date: 2024-07-29 22:01:40 Duration: 0ms
62 5 156.87 MiB 26.43 MiB 33.62 MiB 31.37 MiB create index ix_term_enrich_obj_type on pub1.term_enrichment using btree (object_type_id);-
CREATE INDEX ix_term_enrich_obj_type ON pub1.term_enrichment USING btree (object_type_id);
Date: 2024-07-29 23:56:58 Duration: 1s65ms
-
CREATE INDEX ix_term_enrich_obj_type ON pub1.term_enrichment USING btree (object_type_id);
Date: 2024-07-29 23:56:58 Duration: 0ms
63 5 1021.30 MiB 185.03 MiB 213.88 MiB 204.26 MiB create index ix_phenotype_term_ref_term_id on pub1.phenotype_term_reference using btree (term_id);-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub1.phenotype_term_reference USING btree (term_id);
Date: 2024-07-29 21:59:45 Duration: 9s575ms
-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub1.phenotype_term_reference USING btree (term_id);
Date: 2024-07-29 21:59:45 Duration: 0ms
64 5 628.30 MiB 116.72 MiB 131.20 MiB 125.66 MiB create index ix_gene_disease_network_score on pub1.gene_disease using btree (network_score);-
CREATE INDEX ix_gene_disease_network_score ON pub1.gene_disease USING btree (network_score);
Date: 2024-07-30 00:28:43 Duration: 14s456ms
-
CREATE INDEX ix_gene_disease_network_score ON pub1.gene_disease USING btree (network_score);
Date: 2024-07-30 00:28:43 Duration: 0ms
65 5 241.71 MiB 45.57 MiB 50.93 MiB 48.34 MiB create index ix_chem_disease_reference_dis on pub1.chem_disease_reference using btree (disease_id);-
CREATE INDEX ix_chem_disease_reference_dis ON pub1.chem_disease_reference USING btree (disease_id);
Date: 2024-07-29 22:01:27 Duration: 2s789ms
-
CREATE INDEX ix_chem_disease_reference_dis ON pub1.chem_disease_reference USING btree (disease_id);
Date: 2024-07-29 22:01:27 Duration: 0ms
66 4 32.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_chem_disease_exp_ref_qty on pub1.chem_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_chem_disease_exp_ref_qty ON pub1.chem_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2024-07-30 00:29:04 Duration: 0ms
67 4 1.98 MiB 496.00 KiB 528.00 KiB 508.00 KiB create index ix_chem_disease_cur_ref_qty on pub1.chem_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_chem_disease_cur_ref_qty ON pub1.chem_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2024-07-30 00:29:04 Duration: 0ms
68 4 62.77 MiB 15.15 MiB 16.17 MiB 15.69 MiB create index ix_chem_disease_ind_gene_qty on pub1.chem_disease using btree (indirect_gene_qty) where (indirect_gene_qty > ?);-
CREATE INDEX ix_chem_disease_ind_gene_qty ON pub1.chem_disease USING btree (indirect_gene_qty) WHERE (indirect_gene_qty > 0);
Date: 2024-07-30 00:29:04 Duration: 0ms
69 4 63.65 MiB 15.06 MiB 16.27 MiB 15.91 MiB create index ix_chem_disease_network_score on pub1.chem_disease using btree (network_score);-
CREATE INDEX ix_chem_disease_network_score ON pub1.chem_disease USING btree (network_score);
Date: 2024-07-30 00:29:03 Duration: 1s392ms
-
CREATE INDEX ix_chem_disease_network_score ON pub1.chem_disease USING btree (network_score);
Date: 2024-07-30 00:29:03 Duration: 0ms
70 4 13.24 MiB 8.00 KiB 6.76 MiB 3.31 MiB alter table pub1.phenotype_term_axn add constraint phenotype_term_axn_pk primary key (phenotype_id, term_id, action_type_nm, action_degree_type_nm);-
ALTER TABLE pub1.phenotype_term_axn ADD CONSTRAINT phenotype_term_axn_pk PRIMARY KEY (phenotype_id, term_id, action_type_nm, action_degree_type_nm);
Date: 2024-07-30 00:29:00 Duration: 0ms
71 4 63.65 MiB 15.04 MiB 16.96 MiB 15.91 MiB create index ix_chem_disease_disease on pub1.chem_disease using btree (disease_id);-
CREATE INDEX ix_chem_disease_disease ON pub1.chem_disease USING btree (disease_id);
Date: 2024-07-30 00:29:03 Duration: 0ms
72 2 6.00 MiB 2.50 MiB 3.50 MiB 3.00 MiB create index ix_phenotype_term_axn_term_id on pub1.phenotype_term_axn using btree (term_id);-
CREATE INDEX ix_phenotype_term_axn_term_id ON pub1.phenotype_term_axn USING btree (term_id);
Date: 2024-07-30 00:29:01 Duration: 0ms
73 2 6.00 MiB 2.51 MiB 3.49 MiB 3.00 MiB create index ix_phenotype_term_axn_phenotype_id on pub1.phenotype_term_axn using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_axn_phenotype_id ON pub1.phenotype_term_axn USING btree (phenotype_id);
Date: 2024-07-30 00:29:01 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 1.00 GiB SELECT * FROM pgbulkload.pg_bulkload ($1);[ Date: 2024-07-29 12:34:07 - Database: ctdprd51 - User: load - Application: pg_bulkload ]
2 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
3 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
4 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
5 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
6 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
7 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
8 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:35 ]
9 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
10 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
11 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
12 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
13 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
14 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
15 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
16 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
17 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
18 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
19 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
20 1.00 GiB select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn;[ Date: 2024-07-29 20:08:36 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 236.55 sec Highest CPU-cost vacuum
Table pub1.gene_disease
Database ctdprd51 - 2024-07-30 01:03:13 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 236.55 sec Highest CPU-cost vacuum
Table pub1.gene_disease
Database ctdprd51 - 2024-07-30 01:03:13 Date
Analyzes per table
Key values
- pubc.log_query (149) Main table analyzed (database ctdprd51)
- 269 analyzes Total
Table Number of analyzes ctdprd51.pubc.log_query 149 ctdprd51.pub1.term_set_enrichment 9 ctdprd51.pub1.term_set_enrichment_agent 7 ctdprd51.pg_catalog.pg_class 5 ctdprd51.pub1.term 4 ctdprd51.pg_catalog.pg_attribute 3 ctdprd51.pub1.term_comp 3 ctdprd51.pub1.reference 3 ctdprd51.pub1.term_comp_agent 3 ctdprd51.pg_catalog.pg_index 2 ctdprd51.pg_catalog.pg_type 2 ctdprd51.pub1.phenotype_term 2 ctdprd51.pub2.term_set_enrichment 2 ctdprd51.pub1.db 2 ctdprd51.pg_catalog.pg_depend 2 ctdprd51.pub1.dag_node 2 ctdprd51.pg_catalog.pg_shdepend 2 ctdprd51.pub1.dag_edge 1 ctdprd51.edit.db_report_site 1 ctdprd51.pg_catalog.pg_trigger 1 ctdprd51.pub1.list_db_report 1 ctdprd51.edit.country 1 ctdprd51.pub1.exp_event 1 ctdprd51.pub1.exp_event_location 1 ctdprd51.pub1.gene_chem_ref_gene_form 1 ctdprd51.pub1.exp_study_factor 1 ctdprd51.pub1.exp_event_assay_method 1 ctdprd51.pub1.term_reference 1 ctdprd51.pub1.country 1 ctdprd51.edit.slim_term 1 ctdprd51.pub1.gene_gene 1 ctdprd51.edit.object_note 1 ctdprd51.pub1.reference_party 1 ctdprd51.edit.term_label_type 1 ctdprd51.pub1.gene_gene_ref_throughput 1 ctdprd51.edit.action_degree 1 ctdprd51.pub1.exp_stressor 1 ctdprd51.pg_catalog.pg_description 1 ctdprd51.pub1.chem_disease 1 ctdprd51.edit.reference_ixn_qualifier 1 ctdprd51.pub1.medium 1 ctdprd51.pg_catalog.pg_attrdef 1 ctdprd51.pub1.term_label 1 ctdprd51.edit.db_report 1 ctdprd51.pub1.gene_gene_reference 1 ctdprd51.pub1.gene_taxon 1 ctdprd51.pub1.exp_receptor_gender 1 ctdprd51.pub1.slim_term_mapping 1 ctdprd51.pub2.term_set_enrichment_agent 1 ctdprd51.pub1.exp_outcome 1 ctdprd51.pub1.exp_stressor_stressor_src 1 ctdprd51.pub1.term_pathway 1 ctdprd51.pub1.reference_exp 1 ctdprd51.pub1.exp_receptor_race 1 ctdprd51.pub1.action_type 1 ctdprd51.edit.reference_db_link 1 ctdprd51.pub1.db_report_site 1 ctdprd51.pub1.gene_go_annot 1 ctdprd51.pub1.db_report 1 ctdprd51.pub1.gene_disease 1 ctdprd51.pub1.exposure 1 ctdprd51.pub1.reference_party_role 1 ctdprd51.edit.study_factor 1 ctdprd51.pg_catalog.pg_proc 1 ctdprd51.edit.geographic_region 1 ctdprd51.edit.action_degree_type 1 ctdprd51.pub1.ixn 1 ctdprd51.edit.db_link 1 ctdprd51.pub1.exp_anatomy 1 ctdprd51.edit.action_type 1 ctdprd51.pub1.geographic_region 1 ctdprd51.pub2.term_comp_agent 1 ctdprd51.edit.db 1 ctdprd51.edit.exp_outcome 1 ctdprd51.pub2.term_comp 1 ctdprd51.pub1.exp_event_project 1 ctdprd51.pub1.exp_receptor 1 ctdprd51.pg_catalog.pg_constraint 1 ctdprd51.load.data_load 1 ctdprd51.pub1.exp_receptor_tobacco_use 1 ctdprd51.pub1.db_link 1 ctdprd51.edit.action_type_path 1 ctdprd51.edit.list_db_report 1 ctdprd51.pub1.img 1 Total 269 Vacuums per table
Key values
- pubc.log_query (36) Main table vacuumed on database ctdprd51
- 137 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 36 23 20,096 0 3,422 0 6 5,946 730 4,802,197 ctdprd51.pg_catalog.pg_statistic 7 7 4,593 0 874 0 58 2,599 746 3,441,058 ctdprd51.pub1.term_set_enrichment 6 0 4,040 0 545 0 0 1,485 10 160,892 ctdprd51.pg_toast.pg_toast_2619 5 5 19,288 0 6,630 0 50,869 14,640 4,410 2,269,254 ctdprd51.pub1.term_set_enrichment_agent 5 0 171,350 0 22,971 0 0 71,201 6 4,251,151 ctdprd51.pub1.term 5 3 2,185,986 0 180,434 0 38 1,412,320 415,748 1,810,863,327 ctdprd51.pg_catalog.pg_class 4 4 1,195 0 153 0 0 585 140 695,084 ctdprd51.pub1.reference 3 2 630,539 0 77,140 0 0 425,505 48,203 205,191,060 ctdprd51.pg_toast.pg_toast_486223 3 0 102 0 4 0 0 12 1 9,292 ctdprd51.pg_catalog.pg_attribute 3 3 1,599 0 271 0 168 788 221 1,002,871 ctdprd51.pub1.dag_node 2 1 401,283 0 601 0 0 313,686 591 94,470,772 ctdprd51.pub1.term_comp_agent 2 0 414 0 79 0 0 109 3 29,461 ctdprd51.pub1.phenotype_term 2 2 939,895 0 109,009 0 0 755,013 98,265 263,358,456 ctdprd51.pub1.term_label 2 1 806,262 0 723 0 0 614,773 722 146,416,213 ctdprd51.pub1.exp_stressor_stressor_src 1 0 2,573 0 4 0 0 1,258 1 82,641 ctdprd51.pub1.exp_outcome 1 0 577 0 3 0 0 231 1 22,048 ctdprd51.pub2.term_set_enrichment_agent 1 0 556,267 0 276,467 0 0 277,996 10 16,480,839 ctdprd51.edit.actor_form_type 1 0 82 0 2 0 0 3 2 12,403 ctdprd51.pub1.slim_term_mapping 1 0 600 0 3 0 0 1 1 6,389 ctdprd51.pub1.exp_receptor_race 1 0 1,314 0 3 0 0 622 1 45,117 ctdprd51.pub1.term_pathway 1 0 3,334 0 4 0 0 1,614 2 110,529 ctdprd51.edit.evidence 1 0 32 0 2 0 0 3 2 15,675 ctdprd51.pub1.reference_exp 1 0 326 0 3 0 0 126 1 15,853 ctdprd51.pub1.gene_go_annot 1 0 525,069 0 251,962 0 0 262,424 10 15,563,299 ctdprd51.edit.reference_db_link 1 0 7,198 0 4 0 0 3,595 1 220,431 ctdprd51.pub1.db 1 1 146 0 4 0 0 17 2 15,138 ctdprd51.pub1.reference_party_role 1 0 13,276 0 4 0 0 6,611 1 398,468 ctdprd51.pub1.exposure 1 0 3,638 0 3 0 0 1,766 1 112,613 ctdprd51.pub1.gene_disease 1 1 2,806,852 0 718,244 0 0 1,589,002 689,812 2,086,479,264 ctdprd51.pg_catalog.pg_depend 1 1 712 0 96 0 65 341 104 389,191 ctdprd51.edit.receptor 1 0 43 0 5 0 0 3 2 14,511 ctdprd51.edit.action_degree_type 1 0 82 0 2 0 0 3 2 13,317 ctdprd51.pg_catalog.pg_proc 1 1 433 0 96 0 79 294 94 182,190 ctdprd51.pg_catalog.pg_shdepend 1 1 198 0 16 0 0 99 14 49,908 ctdprd51.pub1.exp_anatomy 1 0 159 0 4 0 0 34 2 14,197 ctdprd51.edit.db_link 1 0 7,449 0 3 0 0 3,595 1 220,500 ctdprd51.pub1.ixn 1 1 1,447,136 0 87 0 0 1,232,168 214,973 137,583,239 ctdprd51.pub1.exp_receptor_tobacco_use 1 0 1,190 0 3 0 0 560 1 41,459 ctdprd51.pub1.exp_receptor 1 0 7,273 0 3 0 0 3,608 1 221,291 ctdprd51.pg_catalog.pg_constraint 1 1 270 0 20 0 0 98 19 96,031 ctdprd51.pub1.exp_event_project 1 0 2,016 0 3 0 0 986 1 66,593 ctdprd51.pub2.term_comp_agent 1 0 323 0 180 0 0 176 2 20,107 ctdprd51.pub1.img 1 0 1,108 0 5 0 0 524 2 44,667 ctdprd51.pub1.db_link 1 0 235,391 0 70,757 0 0 117,565 4 6,969,345 ctdprd51.pub1.dag_edge 1 0 1,024 0 5 0 0 482 2 42,865 ctdprd51.pg_catalog.pg_index 1 1 197 0 26 0 0 113 22 120,186 ctdprd51.pub1.gene_chem_ref_gene_form 1 0 31,899 0 4 0 0 15,910 2 951,525 ctdprd51.pub1.exp_study_factor 1 0 113 0 15 0 0 11 2 14,836 ctdprd51.pub1.exp_event_location 1 0 3,406 0 4 0 0 1,652 2 110,083 ctdprd51.pub1.exp_event 1 0 12,338 0 3 0 0 6,091 1 367,788 ctdprd51.pg_catalog.pg_trigger 1 1 334 0 26 0 0 133 35 207,574 ctdprd51.pub1.reference_party 1 0 5,101 0 4 0 0 2,500 2 161,083 ctdprd51.pub1.gene_gene 1 0 11,899 0 5 0 0 5,898 2 362,161 ctdprd51.pub1.exp_event_assay_method 1 0 4,768 0 3 0 0 2,355 1 147,364 ctdprd51.pub1.term_reference 1 0 36,531 0 5 0 0 18,211 2 1,087,720 ctdprd51.pub1.gene_gene_ref_throughput 1 0 14,393 0 3 0 0 7,157 1 430,682 ctdprd51.pg_catalog.pg_type 1 1 142 0 14 0 0 67 12 37,012 ctdprd51.pub1.chem_disease 1 1 263,283 0 9,633 0 0 160,904 9,621 116,500,716 ctdprd51.pub1.exp_stressor 1 0 6,007 0 4 0 0 2,974 2 189,653 ctdprd51.pg_catalog.pg_attrdef 1 1 78 0 5 0 0 18 2 18,321 ctdprd51.pub1.gene_gene_reference 1 0 29,995 0 2 1 0 1 0 281 ctdprd51.pub2.term_set_enrichment 1 0 11,678 0 5,498 0 0 5,787 2 354,932 ctdprd51.pub1.exp_receptor_gender 1 0 2,670 0 3 0 0 1,320 1 86,299 ctdprd51.pub1.gene_taxon 1 0 139,343 0 7 0 0 69,614 4 4,137,371 ctdprd51.pg_toast.pg_toast_5764067 1 1 90 0 3 0 0 50 4 11,733 ctdprd51.pg_toast.pg_toast_5764136 1 0 87,235 0 4 0 0 43,610 2 2,589,513 Total 137 64 11,474,233 193,467 1,736,124 1 51,283 7,468,843 1,484,590 4,930,398,039 Tuples removed per table
Key values
- pub1.gene_disease (32874952) Main table with removed tuples on database ctdprd51
- 70941947 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pub1.gene_disease 1 1 32,874,952 32,874,952 0 0 483,456 ctdprd51.pub1.phenotype_term 2 2 19,751,065 6,575,252 0 0 246,041 ctdprd51.pub1.term_label 2 1 6,121,632 12,243,264 0 0 269,964 ctdprd51.pub1.term 5 3 4,610,930 8,408,563 0 0 605,042 ctdprd51.pub1.chem_disease 1 1 3,329,781 3,329,781 0 0 48,918 ctdprd51.pub1.ixn 1 1 2,293,805 2,240,273 0 0 529,116 ctdprd51.pub1.dag_node 2 1 1,713,646 3,412,730 0 0 123,383 ctdprd51.pub1.reference 3 2 200,527 590,829 0 0 200,599 ctdprd51.pubc.log_query 36 23 18,716 144,722 84,202 0 6,174 ctdprd51.pg_toast.pg_toast_2619 5 5 17,230 95,312 1,293 0 62,960 ctdprd51.pg_catalog.pg_statistic 7 7 2,896 15,025 176 0 2,030 ctdprd51.pg_catalog.pg_attribute 3 3 2,698 26,959 235 0 711 ctdprd51.pg_catalog.pg_depend 1 1 1,328 13,752 0 0 145 ctdprd51.pg_catalog.pg_shdepend 1 1 708 2,071 0 0 21 ctdprd51.pg_catalog.pg_trigger 1 1 439 1,797 0 0 50 ctdprd51.pg_catalog.pg_class 4 4 356 7,286 149 0 244 ctdprd51.pg_catalog.pg_index 1 1 232 1,162 0 0 41 ctdprd51.pg_catalog.pg_proc 1 1 201 1,593 0 0 204 ctdprd51.pg_catalog.pg_type 1 1 166 1,155 0 0 35 ctdprd51.pg_catalog.pg_constraint 1 1 145 879 0 0 36 ctdprd51.pub1.db 1 1 130 130 0 0 6 ctdprd51.pg_toast.pg_toast_5764067 1 1 71 69 0 0 21 ctdprd51.edit.action_degree_type 1 0 65 13 0 0 1 ctdprd51.edit.receptor 1 0 64 16 0 0 1 ctdprd51.pg_catalog.pg_attrdef 1 1 56 227 0 0 10 ctdprd51.edit.actor_form_type 1 0 54 18 0 0 1 ctdprd51.edit.evidence 1 0 54 18 0 0 1 ctdprd51.pub1.exp_stressor_stressor_src 1 0 0 283,944 0 0 1,257 ctdprd51.pub1.exp_outcome 1 0 0 13,346 0 0 230 ctdprd51.pub1.term_set_enrichment 6 0 0 284,270 0 0 4,702 ctdprd51.pub2.term_set_enrichment_agent 1 0 0 131,078,936 0 0 1,489,537 ctdprd51.pub1.slim_term_mapping 1 0 0 32,796 0 0 261 ctdprd51.pub1.exp_receptor_race 1 0 0 95,695 0 0 621 ctdprd51.pub1.term_pathway 1 0 0 135,792 0 0 1,613 ctdprd51.pub1.reference_exp 1 0 0 3,455 0 0 125 ctdprd51.pub1.gene_go_annot 1 0 0 41,202,524 0 0 262,423 ctdprd51.edit.reference_db_link 1 0 0 322,643 0 0 3,594 ctdprd51.pub1.reference_party_role 1 0 0 1,222,752 0 0 6,610 ctdprd51.pub1.exposure 1 0 0 214,316 0 0 1,765 ctdprd51.pub1.exp_anatomy 1 0 0 3,857 0 0 33 ctdprd51.edit.db_link 1 0 0 322,643 0 0 3,594 ctdprd51.pub1.exp_receptor_tobacco_use 1 0 0 79,256 0 0 559 ctdprd51.pub1.term_comp_agent 2 0 0 16,631 0 0 150 ctdprd51.pub1.exp_receptor 1 0 0 190,786 0 0 3,607 ctdprd51.pub1.exp_event_project 1 0 0 94,569 0 0 985 ctdprd51.pub2.term_comp_agent 1 0 0 179,235 0 0 1,501 ctdprd51.pub1.img 1 0 0 50,714 0 0 523 ctdprd51.pg_toast.pg_toast_486223 3 0 0 41 0 0 9 ctdprd51.pub1.db_link 1 0 0 16,293,982 0 0 117,564 ctdprd51.pub1.dag_edge 1 0 0 88,931 0 0 481 ctdprd51.pub1.gene_chem_ref_gene_form 1 0 0 2,937,066 0 0 15,909 ctdprd51.pub1.exp_study_factor 1 0 0 1,621 0 0 10 ctdprd51.pub1.exp_event_location 1 0 0 248,805 0 0 1,651 ctdprd51.pub1.exp_event 1 0 0 207,227 0 0 6,090 ctdprd51.pub1.reference_party 1 0 0 447,416 0 0 2,499 ctdprd51.pub1.gene_gene 1 0 0 1,090,858 0 0 5,897 ctdprd51.pub1.exp_event_assay_method 1 0 0 236,079 0 0 2,354 ctdprd51.pub1.term_reference 1 0 0 3,368,794 0 0 18,210 ctdprd51.pub1.gene_gene_ref_throughput 1 0 0 1,376,067 0 0 7,156 ctdprd51.pub1.term_set_enrichment_agent 5 0 0 13,479,392 0 0 153,179 ctdprd51.pub1.exp_stressor 1 0 0 207,388 0 0 2,973 ctdprd51.pub1.gene_gene_reference 1 0 0 1,370,445 0 0 14,921 ctdprd51.pub2.term_set_enrichment 1 0 0 1,826,313 0 0 30,236 ctdprd51.pub1.exp_receptor_gender 1 0 0 188,297 0 0 1,319 ctdprd51.pub1.gene_taxon 1 0 0 10,929,250 0 0 69,613 ctdprd51.pg_toast.pg_toast_5764136 1 0 0 235,828 0 0 43,609 Total 137 64 70,941,947 300,349,808 86,055 0 4,856,581 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pub1.exp_stressor_stressor_src 1 0 0 0 ctdprd51.pub1.exp_outcome 1 0 0 0 ctdprd51.pub1.term_set_enrichment 6 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 1 0 0 0 ctdprd51.edit.actor_form_type 1 0 54 0 ctdprd51.pub1.slim_term_mapping 1 0 0 0 ctdprd51.pub1.exp_receptor_race 1 0 0 0 ctdprd51.pub1.term_pathway 1 0 0 0 ctdprd51.edit.evidence 1 0 54 0 ctdprd51.pub1.reference_exp 1 0 0 0 ctdprd51.pub1.gene_go_annot 1 0 0 0 ctdprd51.edit.reference_db_link 1 0 0 0 ctdprd51.pub1.db 1 1 130 0 ctdprd51.pub1.reference_party_role 1 0 0 0 ctdprd51.pub1.dag_node 2 1 1713646 0 ctdprd51.pub1.exposure 1 0 0 0 ctdprd51.pub1.gene_disease 1 1 32874952 0 ctdprd51.pg_catalog.pg_depend 1 1 1328 0 ctdprd51.edit.receptor 1 0 64 0 ctdprd51.edit.action_degree_type 1 0 65 0 ctdprd51.pg_toast.pg_toast_2619 5 5 17230 0 ctdprd51.pg_catalog.pg_proc 1 1 201 0 ctdprd51.pub1.reference 3 2 200527 0 ctdprd51.pg_catalog.pg_shdepend 1 1 708 0 ctdprd51.pub1.exp_anatomy 1 0 0 0 ctdprd51.edit.db_link 1 0 0 0 ctdprd51.pub1.ixn 1 1 2293805 0 ctdprd51.pub1.exp_receptor_tobacco_use 1 0 0 0 ctdprd51.pub1.term_comp_agent 2 0 0 0 ctdprd51.pub1.exp_receptor 1 0 0 0 ctdprd51.pg_catalog.pg_constraint 1 1 145 0 ctdprd51.pub1.exp_event_project 1 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pub1.img 1 0 0 0 ctdprd51.pg_toast.pg_toast_486223 3 0 0 0 ctdprd51.pub1.db_link 1 0 0 0 ctdprd51.pub1.dag_edge 1 0 0 0 ctdprd51.pg_catalog.pg_index 1 1 232 0 ctdprd51.pg_catalog.pg_statistic 7 7 2896 0 ctdprd51.pub1.gene_chem_ref_gene_form 1 0 0 0 ctdprd51.pub1.exp_study_factor 1 0 0 0 ctdprd51.pg_catalog.pg_class 4 4 356 0 ctdprd51.pub1.exp_event_location 1 0 0 0 ctdprd51.pubc.log_query 36 23 18716 0 ctdprd51.pub1.exp_event 1 0 0 0 ctdprd51.pg_catalog.pg_trigger 1 1 439 0 ctdprd51.pub1.reference_party 1 0 0 0 ctdprd51.pub1.gene_gene 1 0 0 0 ctdprd51.pg_catalog.pg_attribute 3 3 2698 0 ctdprd51.pub1.exp_event_assay_method 1 0 0 0 ctdprd51.pub1.term_reference 1 0 0 0 ctdprd51.pub1.gene_gene_ref_throughput 1 0 0 0 ctdprd51.pg_catalog.pg_type 1 1 166 0 ctdprd51.pub1.term_set_enrichment_agent 5 0 0 0 ctdprd51.pub1.phenotype_term 2 2 19751065 0 ctdprd51.pub1.chem_disease 1 1 3329781 0 ctdprd51.pub1.exp_stressor 1 0 0 0 ctdprd51.pub1.term_label 2 1 6121632 0 ctdprd51.pg_catalog.pg_attrdef 1 1 56 0 ctdprd51.pub1.gene_gene_reference 1 0 0 0 ctdprd51.pub2.term_set_enrichment 1 0 0 0 ctdprd51.pub1.term 5 3 4610930 0 ctdprd51.pub1.exp_receptor_gender 1 0 0 0 ctdprd51.pub1.gene_taxon 1 0 0 0 ctdprd51.pg_toast.pg_toast_5764067 1 1 71 0 ctdprd51.pg_toast.pg_toast_5764136 1 0 0 0 Total 137 64 70,941,947 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jul 28 00 0 1 01 0 3 02 0 2 03 0 1 04 0 1 05 0 3 06 0 0 07 0 1 08 0 2 09 0 0 10 0 0 11 0 1 12 0 0 13 0 1 14 0 1 15 0 1 16 0 1 17 0 1 18 0 0 19 0 1 20 0 0 21 0 0 22 0 1 23 0 0 Jul 29 00 0 1 01 0 2 02 0 2 03 0 1 04 0 2 05 0 3 06 0 3 07 0 1 08 0 1 09 0 11 10 0 17 11 0 1 12 0 1 13 0 1 14 0 2 15 0 1 16 0 1 17 0 1 18 0 19 19 0 2 20 0 0 21 0 0 22 0 0 23 0 3 Jul 30 00 0 23 01 0 10 02 0 6 03 0 2 04 0 7 05 0 3 06 0 4 07 0 1 08 0 1 09 0 7 10 0 1 11 0 0 12 0 1 13 0 0 14 0 0 15 0 1 16 0 2 17 0 3 18 0 0 19 0 1 20 0 0 21 0 1 22 0 0 23 0 0 Jul 31 00 0 0 01 0 3 02 0 2 03 0 1 04 0 3 05 0 3 06 0 2 07 0 1 08 0 0 09 0 1 10 0 1 11 0 1 12 0 0 13 0 1 14 0 1 15 0 1 16 0 1 17 0 1 18 0 0 19 0 0 20 0 1 21 0 0 22 0 1 23 0 0 Aug 01 00 0 2 01 0 2 02 0 2 03 0 2 04 0 4 05 0 2 06 0 1 07 0 1 08 0 1 09 0 2 10 0 1 11 0 1 12 0 0 13 0 2 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 1 20 0 1 21 0 0 22 0 0 23 0 0 Aug 02 00 0 1 01 0 2 02 0 1 03 0 2 04 0 2 05 0 4 06 0 0 07 0 1 08 0 1 09 0 0 10 0 1 11 0 1 12 0 0 13 0 2 14 0 0 15 0 1 16 0 0 17 0 0 18 0 1 19 0 0 20 0 0 21 0 0 22 0 1 23 0 0 Aug 03 00 0 1 01 0 2 02 0 2 03 0 3 04 0 2 05 0 3 06 0 3 07 0 1 08 0 1 09 0 0 10 0 1 11 0 0 12 0 0 13 0 2 14 0 1 15 0 1 16 0 0 17 0 0 18 0 1 19 0 0 20 0 0 21 0 0 22 0 0 23 0 1 - 236.55 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 5,985 Total read queries
- 454 Total write queries
Queries by database
Key values
- ctdprd51 Main database
- 4,433 Requests
- 1d11h53m23s (ctdprd51)
- Main time consuming database
Database Request type Count Duration ctdprd51 Total 4,433 1d11h53m23s copy to 49 19m19s cte 27 1m23s ddl 1 4s653ms insert 3 12m18s others 1 2s630ms select 4,351 1d11h20m13s tcl 1 1s383ms unknown Total 2,036 18h35m45s copy to 261 1h47m48s cte 23 34s795ms ddl 52 38m45s insert 28 42m33s others 29 52m13s select 1,634 14h2m4s update 9 31m43s Queries by user
Key values
- pubeu Main user
- 7,904 Requests
User Request type Count Duration edit Total 7 34s5ms insert 2 21s690ms select 5 12s315ms editeu Total 36 2m23s select 36 2m23s load Total 63 47m36s others 1 2s630ms select 62 47m33s postgres Total 108 42m18s copy to 108 42m18s pub1 Total 16 24m44s ddl 2 9s307ms insert 3 23m55s select 9 36s957ms tcl 2 2s766ms pub2 Total 2 10s125ms select 2 10s125ms pubc Total 2 7s255ms select 2 7s255ms pubeu Total 7,904 2d11h18m9s cte 42 2m1s select 7,862 2d11h16m8s qaeu Total 145 1h31m35s cte 21 1m10s select 124 1h30m25s unknown Total 4,404 1d11h48m2s copy to 695 6h30m14s cte 55 1m23s ddl 96 59m43s insert 41 1h19m56s others 47 1h43m19s select 3,461 1d41m40s update 9 31m43s Duration by user
Key values
- 2d11h18m9s (pubeu) Main time consuming user
User Request type Count Duration edit Total 7 34s5ms insert 2 21s690ms select 5 12s315ms editeu Total 36 2m23s select 36 2m23s load Total 63 47m36s others 1 2s630ms select 62 47m33s postgres Total 108 42m18s copy to 108 42m18s pub1 Total 16 24m44s ddl 2 9s307ms insert 3 23m55s select 9 36s957ms tcl 2 2s766ms pub2 Total 2 10s125ms select 2 10s125ms pubc Total 2 7s255ms select 2 7s255ms pubeu Total 7,904 2d11h18m9s cte 42 2m1s select 7,862 2d11h16m8s qaeu Total 145 1h31m35s cte 21 1m10s select 124 1h30m25s unknown Total 4,404 1d11h48m2s copy to 695 6h30m14s cte 55 1m23s ddl 96 59m43s insert 41 1h19m56s others 47 1h43m19s select 3,461 1d41m40s update 9 31m43s Queries by host
Key values
- unknown Main host
- 12,687 Requests
- 4d2h35m41s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 6,387 Requests
- 2d5h55m30s (unknown)
- Main time consuming application
Application Request type Count Duration pgAdmin 4 - CONN:2056930 Total 1 1s383ms tcl 1 1s383ms pgAdmin 4 - CONN:3586875 Total 1 2s506ms select 1 2s506ms pgAdmin 4 - CONN:9804208 Total 1 10s845ms insert 1 10s845ms pgAdmin 4 - DB:ctdprd51 Total 1 2s397ms select 1 2s397ms pg_bulkload Total 23 13m38s select 23 13m38s pg_dump Total 49 19m19s copy to 49 19m19s psql Total 6 23s487ms ddl 1 4s653ms select 5 18s833ms unknown Total 6,387 2d5h55m30s copy to 261 1h47m48s cte 50 1m58s ddl 52 38m45s insert 30 54m41s others 30 52m16s select 5,955 2d1h8m15s update 9 31m43s Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2024-07-29 11:52:09 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 3,518 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 1h58m26s select pub1.maint_term_derive_data ();[ Date: 2024-07-30 06:36:52 - Bind query: yes ]
2 1h35m59s select pub1.maint_gene_chem_ref_gene_form_refresh ();[ Date: 2024-07-30 02:39:46 - Bind query: yes ]
3 1h3m37s SELECT maint_term_derive_nm_fts ();[ Date: 2024-07-30 03:46:14 - Bind query: yes ]
4 46m8s VACUUM FULL ANALYZE;[ Date: 2024-07-30 04:38:03 - Bind query: yes ]
5 39m58s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.GENE_GO_ANNOT gga, pub1.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub1.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2024-07-29 21:29:41 - Bind query: yes ]
6 37m25s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub1.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.PHENOTYPE_TERM_REFERENCE ptr, pub1.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub1.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2024-07-29 20:49:37 - Bind query: yes ]
7 34m20s SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;[ Date: 2024-07-29 19:19:46 - Bind query: yes ]
8 33m57s SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;[ Date: 2024-07-30 10:27:50 - Database: ctdprd51 - User: qaeu - Bind query: yes ]
9 33m42s select pub1.maint_cached_value_refresh_data_metrics ();[ Date: 2024-07-30 07:20:43 - Bind query: yes ]
10 24m12s insert into pub1.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;[ Date: 2024-07-29 18:37:00 - Bind query: yes ]
11 23m37s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-08-03 19:00:30 ]
12 23m33s update pub1.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub1.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub1.REFERENCE r where has_exposures = true));[ Date: 2024-07-30 00:58:37 - Bind query: yes ]
13 23m27s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2024-08-03 19:40:58 ]
14 17m13s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2024-07-30 14:32:42 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
15 16m34s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-30 00:16:35 ]
16 16m26s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-31 00:16:27 ]
17 16m25s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-01 00:16:27 ]
18 16m24s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-02 00:16:26 ]
19 16m24s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-08-03 00:16:26 ]
20 16m21s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2024-07-29 00:16:22 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 1d11h32m42s 3,217 1s101ms 49s566ms 39s776ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 28 04 1 1s428ms 1s428ms 10 4 9s494ms 2s373ms 14 1 5s35ms 5s35ms 15 1 2s888ms 2s888ms 16 1 4s901ms 4s901ms 22 1 2s674ms 2s674ms 23 1 4s95ms 4s95ms Jul 29 02 2 16s192ms 8s96ms 03 1 6s225ms 6s225ms 10 2 3s23ms 1s511ms 19 1 8s112ms 8s112ms 22 18 12m4s 40s254ms 23 87 57m14s 39s475ms Jul 30 00 85 57m10s 40s354ms 01 87 56m34s 39s22ms 02 84 54m55s 39s235ms 03 86 56m43s 39s575ms 04 83 57m20s 41s456ms 05 52 34m19s 39s604ms 06 37 24m49s 40s267ms 07 86 57m32s 40s140ms 08 87 57m4s 39s356ms 09 86 56m58s 39s750ms 10 80 57m8s 42s855ms 11 83 56m44s 41s15ms 12 86 56m38s 39s513ms 13 87 57m21s 39s558ms 14 86 56m41s 39s557ms 15 87 57m32s 39s687ms 16 88 57m14s 39s23ms 17 85 56m34s 39s935ms 18 86 57m11s 39s896ms 19 86 57m14s 39s936ms 20 86 57m16s 39s954ms 21 85 56m51s 40s132ms 22 86 56m54s 39s698ms 23 87 57m40s 39s776ms Jul 31 00 85 56m53s 40s155ms 01 85 57m2s 40s263ms 02 85 57m11s 40s369ms 03 85 57m11s 40s372ms 04 84 56m40s 40s480ms 05 51 34m27s 40s539ms 08 1 1s101ms 1s101ms 10 2 3s124ms 1s562ms 18 1 5s441ms 5s441ms 22 78 52m29s 40s372ms 23 85 57m9s 40s345ms Aug 01 00 84 56m43s 40s515ms 01 85 57m7s 40s327ms 02 85 57m10s 40s359ms 03 84 56m51s 40s613ms 04 84 56m59s 40s703ms 05 51 34m23s 40s452ms 06 1 3s12ms 3s12ms 19 1 4s26ms 4s26ms 23 1 2s717ms 2s717ms Aug 02 03 1 6s476ms 6s476ms 08 1 15s421ms 15s421ms 09 1 1s842ms 1s842ms 11 1 17s72ms 17s72ms 17 1 1s103ms 1s103ms Aug 03 11 1 6s523ms 6s523ms 14 1 18s455ms 18s455ms [ User: pubeu - Total duration: 1d8h39m15s - Times executed: 2944 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1866850;
Date: 2024-07-30 04:32:27 Duration: 49s566ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1865950;
Date: 2024-07-30 04:18:36 Duration: 48s458ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1865450;
Date: 2024-07-30 04:10:50 Duration: 47s244ms Database: ctdprd51 User: pubeu Bind query: yes
2 1h58m26s 1 1h58m26s 1h58m26s 1h58m26s select pub1.maint_term_derive_data ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 30 06 1 1h58m26s 1h58m26s -
select pub1.maint_term_derive_data ();
Date: 2024-07-30 06:36:52 Duration: 1h58m26s Bind query: yes
3 1h54m56s 7 16m20s 16m34s 16m25s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 28 00 1 16m20s 16m20s Jul 29 00 1 16m21s 16m21s Jul 30 00 1 16m34s 16m34s Jul 31 00 1 16m26s 16m26s Aug 01 00 1 16m25s 16m25s Aug 02 00 1 16m24s 16m24s Aug 03 00 1 16m24s 16m24s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-30 00:16:35 Duration: 16m34s
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-31 00:16:27 Duration: 16m26s
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-01 00:16:27 Duration: 16m25s
4 1h35m59s 1 1h35m59s 1h35m59s 1h35m59s select pub1.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 30 02 1 1h35m59s 1h35m59s -
select pub1.maint_gene_chem_ref_gene_form_refresh ();
Date: 2024-07-30 02:39:46 Duration: 1h35m59s Bind query: yes
5 1h3m37s 1 1h3m37s 1h3m37s 1h3m37s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 30 03 1 1h3m37s 1h3m37s -
SELECT maint_term_derive_nm_fts ();
Date: 2024-07-30 03:46:14 Duration: 1h3m37s Bind query: yes
6 48m12s 197 1s44ms 33m57s 14s680ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 30 10 182 47m10s 15s552ms 11 15 1m1s 4s94ms [ User: qaeu - Total duration: 33m57s - Times executed: 1 ]
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:27:50 Duration: 33m57s Database: ctdprd51 User: qaeu Bind query: yes
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:34:10 Duration: 6s174ms Bind query: yes
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:46:55 Duration: 5s863ms Bind query: yes
7 46m8s 1 46m8s 46m8s 46m8s vacuum full analyze;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 30 04 1 46m8s 46m8s -
VACUUM FULL ANALYZE;
Date: 2024-07-30 04:38:03 Duration: 46m8s Bind query: yes
-
VACUUM FULL ANALYZE;
Date: 2024-07-30 03:52:03 Duration: 0ms
8 44m59s 72 1s324ms 6m28s 37s492ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 29 10 12 1m26s 7s192ms 11 19 12m7s 38s270ms 12 8 8m2s 1m 19 6 1m7s 11s314ms 21 3 7m39s 2m33s 22 3 6m53s 2m17s 23 18 7m19s 24s404ms Jul 30 00 3 22s885ms 7s628ms [ User: load - Total duration: 13m38s - Times executed: 23 ]
[ Application: pg_bulkload - Total duration: 13m38s - Times executed: 23 ]
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-07-29 21:40:57 Duration: 6m28s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-07-29 22:08:36 Duration: 5m16s Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-07-29 11:07:28 Duration: 3m49s Bind query: yes
9 39m58s 1 39m58s 39m58s 39m58s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.object_type where cd = ?), ( select current_date) from pub1.gene_chem_reference gcr, pub1.gene_go_annot gga, pub1.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 29 21 1 39m58s 39m58s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.GENE_GO_ANNOT gga, pub1.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub1.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 21:29:41 Duration: 39m58s Bind query: yes
10 37m25s 1 37m25s 37m25s 37m25s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.object_type where cd = ?), ptr.term_id, ( select id from pub1.object_type where cd = ?), ( select current_date) from pub1.gene_chem_reference gcr, pub1.phenotype_term_reference ptr, pub1.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 29 20 1 37m25s 37m25s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub1.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.PHENOTYPE_TERM_REFERENCE ptr, pub1.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub1.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 20:49:37 Duration: 37m25s Bind query: yes
11 34m20s 1 34m20s 34m20s 34m20s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 29 19 1 34m20s 34m20s -
SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2024-07-29 19:19:46 Duration: 34m20s Bind query: yes
12 33m42s 1 33m42s 33m42s 33m42s select pub1.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 30 07 1 33m42s 33m42s -
select pub1.maint_cached_value_refresh_data_metrics ();
Date: 2024-07-30 07:20:43 Duration: 33m42s Bind query: yes
-
select pub1.maint_cached_value_refresh_data_metrics ();
Date: 2024-07-30 07:16:29 Duration: 0ms
13 25m48s 14 1s292ms 17m13s 1m50s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 28 00 1 1s489ms 1s489ms 10 1 1s514ms 1s514ms 13 1 2m4s 2m4s 16 1 1s447ms 1s447ms 23 1 3m37s 3m37s Jul 29 00 1 1s302ms 1s302ms Jul 30 06 1 1s292ms 1s292ms 07 1 1s602ms 1s602ms 14 1 17m13s 17m13s Jul 31 06 1 1s554ms 1s554ms Aug 01 08 1 2m37s 2m37s Aug 02 02 1 1s445ms 1s445ms 20 1 2s348ms 2s348ms Aug 03 09 1 1s597ms 1s597ms [ User: pubeu - Total duration: 25m43s - Times executed: 11 ]
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-30 14:32:42 Duration: 17m13s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1242889') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-28 23:52:45 Duration: 3m37s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249743') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-01 08:47:30 Duration: 2m37s Database: ctdprd51 User: pubeu Bind query: yes
14 24m12s 1 24m12s 24m12s 24m12s insert into pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 29 18 1 24m12s 24m12s -
insert into pub1.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2024-07-29 18:37:00 Duration: 24m12s Bind query: yes
15 23m37s 1 23m37s 23m37s 23m37s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Aug 03 19 1 23m37s 23m37s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-03 19:00:30 Duration: 23m37s
16 23m33s 1 23m33s 23m33s 23m33s update pub1.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub1.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub1.reference r where has_exposures = true));Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 30 00 1 23m33s 23m33s -
update pub1.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub1.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub1.REFERENCE r where has_exposures = true));
Date: 2024-07-30 00:58:37 Duration: 23m33s Bind query: yes
17 23m27s 1 23m27s 23m27s 23m27s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Aug 03 19 1 23m27s 23m27s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-03 19:40:58 Duration: 23m27s
18 20m35s 303 3s819ms 16s97ms 4s78ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 28 00 1 3s970ms 3s970ms 01 19 1m17s 4s83ms 02 2 7s984ms 3s992ms 03 1 4s40ms 4s40ms 04 1 3s917ms 3s917ms 05 1 5s536ms 5s536ms 06 1 3s918ms 3s918ms 07 1 3s919ms 3s919ms 10 5 19s864ms 3s972ms 11 1 3s934ms 3s934ms 12 1 3s905ms 3s905ms 14 4 15s778ms 3s944ms 15 2 20s51ms 10s25ms 18 1 3s979ms 3s979ms 20 1 4s13ms 4s13ms 22 1 3s939ms 3s939ms 23 2 7s788ms 3s894ms Jul 29 00 2 8s116ms 4s58ms 01 2 7s935ms 3s967ms 02 1 3s984ms 3s984ms 03 2 7s846ms 3s923ms 05 1 3s869ms 3s869ms 06 1 3s930ms 3s930ms 07 3 12s47ms 4s15ms 08 2 7s887ms 3s943ms 09 2 8s165ms 4s82ms 10 7 40s29ms 5s718ms 11 1 3s911ms 3s911ms 12 3 12s332ms 4s110ms 13 2 7s860ms 3s930ms 15 2 8s20ms 4s10ms 20 1 4s66ms 4s66ms 22 2 7s988ms 3s994ms 23 3 12s412ms 4s137ms Jul 30 00 1 4s178ms 4s178ms 01 1 4s34ms 4s34ms 03 1 4s552ms 4s552ms 05 2 7s920ms 3s960ms 06 1 3s918ms 3s918ms 07 6 24s985ms 4s164ms 08 6 24s27ms 4s4ms 09 5 20s385ms 4s77ms 10 5 19s877ms 3s975ms 11 1 3s980ms 3s980ms 13 2 7s947ms 3s973ms 16 1 3s906ms 3s906ms 17 1 3s934ms 3s934ms 18 1 3s908ms 3s908ms 19 2 7s865ms 3s932ms 20 2 8s186ms 4s93ms 21 1 3s964ms 3s964ms 22 1 3s920ms 3s920ms 23 1 4s268ms 4s268ms Jul 31 01 2 7s806ms 3s903ms 02 1 3s954ms 3s954ms 04 1 3s903ms 3s903ms 05 15 59s763ms 3s984ms 06 1 3s947ms 3s947ms 08 1 4s93ms 4s93ms 09 2 7s993ms 3s996ms 10 5 19s582ms 3s916ms 11 1 3s906ms 3s906ms 13 3 12s361ms 4s120ms 14 4 15s576ms 3s894ms 15 1 3s837ms 3s837ms 17 1 3s900ms 3s900ms 18 3 11s639ms 3s879ms 23 1 4s63ms 4s63ms Aug 01 01 1 3s996ms 3s996ms 03 3 11s939ms 3s979ms 04 1 3s932ms 3s932ms 06 2 7s841ms 3s920ms 07 1 3s897ms 3s897ms 08 1 4s6ms 4s6ms 09 2 8s204ms 4s102ms 10 1 3s957ms 3s957ms 12 2 7s944ms 3s972ms 13 1 4s88ms 4s88ms 14 1 3s909ms 3s909ms 15 1 3s911ms 3s911ms 17 1 4s32ms 4s32ms 19 1 3s849ms 3s849ms 21 1 3s950ms 3s950ms 22 1 3s866ms 3s866ms 23 1 3s867ms 3s867ms Aug 02 00 30 1m58s 3s958ms 01 3 11s772ms 3s924ms 02 14 54s898ms 3s921ms 03 3 11s562ms 3s854ms 04 2 7s922ms 3s961ms 05 5 20s417ms 4s83ms 09 1 3s929ms 3s929ms 10 1 3s993ms 3s993ms 11 4 15s759ms 3s939ms 12 1 4s28ms 4s28ms 15 6 23s763ms 3s960ms 16 1 3s992ms 3s992ms 17 3 11s831ms 3s943ms 19 9 35s923ms 3s991ms 20 2 7s994ms 3s997ms 22 2 7s873ms 3s936ms 23 1 4s24ms 4s24ms Aug 03 00 1 4s21ms 4s21ms 02 4 15s714ms 3s928ms 04 2 8s783ms 4s391ms 05 3 12s18ms 4s6ms 06 4 17s157ms 4s289ms 07 1 3s945ms 3s945ms 08 4 15s913ms 3s978ms 10 4 16s116ms 4s29ms 11 1 4s11ms 4s11ms 12 1 3s871ms 3s871ms 13 1 3s977ms 3s977ms 15 1 3s967ms 3s967ms 17 1 3s929ms 3s929ms [ User: pubeu - Total duration: 11m47s - Times executed: 171 ]
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-28 15:05:19 Duration: 16s97ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-29 10:30:10 Duration: 15s960ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-28 05:57:36 Duration: 5s536ms Bind query: yes
19 13m54s 25 32s930ms 33s580ms 33s367ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 28 06 1 33s284ms 33s284ms 10 1 33s330ms 33s330ms 14 1 33s242ms 33s242ms 18 1 33s312ms 33s312ms Jul 29 06 1 33s256ms 33s256ms 10 1 33s355ms 33s355ms 14 1 33s390ms 33s390ms 18 1 33s325ms 33s325ms Jul 30 06 1 33s528ms 33s528ms 10 1 33s530ms 33s530ms 14 1 33s440ms 33s440ms 18 1 33s366ms 33s366ms Jul 31 06 1 33s360ms 33s360ms 10 1 33s357ms 33s357ms 14 1 33s410ms 33s410ms 18 1 33s359ms 33s359ms Aug 01 06 1 33s376ms 33s376ms 10 1 33s434ms 33s434ms 14 1 33s515ms 33s515ms 18 1 33s326ms 33s326ms Aug 02 06 1 33s580ms 33s580ms 10 1 33s398ms 33s398ms 14 1 33s417ms 33s417ms 18 1 33s348ms 33s348ms Aug 03 19 1 32s930ms 32s930ms [ User: postgres - Total duration: 13m21s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m21s - Times executed: 24 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-02 06:05:35 Duration: 33s580ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-30 10:05:35 Duration: 33s530ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-30 06:05:35 Duration: 33s528ms Database: ctdprd51 User: postgres Application: pg_dump
20 13m30s 21 2s335ms 9m52s 38s591ms select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub1.gene_chem_reference gcr, pub1.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 29 19 12 12m25s 1m2s 20 9 1m4s 7s173ms [ User: load - Total duration: 9m52s - Times executed: 1 ]
-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 19:32:29 Duration: 9m52s Database: ctdprd51 User: load Bind query: yes
-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 19:49:23 Duration: 45s567ms Bind query: yes
-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 20:04:33 Duration: 45s69ms Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 3,217 1d11h32m42s 1s101ms 49s566ms 39s776ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 28 04 1 1s428ms 1s428ms 10 4 9s494ms 2s373ms 14 1 5s35ms 5s35ms 15 1 2s888ms 2s888ms 16 1 4s901ms 4s901ms 22 1 2s674ms 2s674ms 23 1 4s95ms 4s95ms Jul 29 02 2 16s192ms 8s96ms 03 1 6s225ms 6s225ms 10 2 3s23ms 1s511ms 19 1 8s112ms 8s112ms 22 18 12m4s 40s254ms 23 87 57m14s 39s475ms Jul 30 00 85 57m10s 40s354ms 01 87 56m34s 39s22ms 02 84 54m55s 39s235ms 03 86 56m43s 39s575ms 04 83 57m20s 41s456ms 05 52 34m19s 39s604ms 06 37 24m49s 40s267ms 07 86 57m32s 40s140ms 08 87 57m4s 39s356ms 09 86 56m58s 39s750ms 10 80 57m8s 42s855ms 11 83 56m44s 41s15ms 12 86 56m38s 39s513ms 13 87 57m21s 39s558ms 14 86 56m41s 39s557ms 15 87 57m32s 39s687ms 16 88 57m14s 39s23ms 17 85 56m34s 39s935ms 18 86 57m11s 39s896ms 19 86 57m14s 39s936ms 20 86 57m16s 39s954ms 21 85 56m51s 40s132ms 22 86 56m54s 39s698ms 23 87 57m40s 39s776ms Jul 31 00 85 56m53s 40s155ms 01 85 57m2s 40s263ms 02 85 57m11s 40s369ms 03 85 57m11s 40s372ms 04 84 56m40s 40s480ms 05 51 34m27s 40s539ms 08 1 1s101ms 1s101ms 10 2 3s124ms 1s562ms 18 1 5s441ms 5s441ms 22 78 52m29s 40s372ms 23 85 57m9s 40s345ms Aug 01 00 84 56m43s 40s515ms 01 85 57m7s 40s327ms 02 85 57m10s 40s359ms 03 84 56m51s 40s613ms 04 84 56m59s 40s703ms 05 51 34m23s 40s452ms 06 1 3s12ms 3s12ms 19 1 4s26ms 4s26ms 23 1 2s717ms 2s717ms Aug 02 03 1 6s476ms 6s476ms 08 1 15s421ms 15s421ms 09 1 1s842ms 1s842ms 11 1 17s72ms 17s72ms 17 1 1s103ms 1s103ms Aug 03 11 1 6s523ms 6s523ms 14 1 18s455ms 18s455ms [ User: pubeu - Total duration: 1d8h39m15s - Times executed: 2944 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1866850;
Date: 2024-07-30 04:32:27 Duration: 49s566ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1865950;
Date: 2024-07-30 04:18:36 Duration: 48s458ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1865450;
Date: 2024-07-30 04:10:50 Duration: 47s244ms Database: ctdprd51 User: pubeu Bind query: yes
2 409 8m8s 1s84ms 2s190ms 1s194ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 28 00 1 1s156ms 1s156ms 01 1 1s202ms 1s202ms 02 1 1s182ms 1s182ms 03 2 2s385ms 1s192ms 04 3 3s597ms 1s199ms 05 2 2s579ms 1s289ms 06 1 1s185ms 1s185ms 07 1 1s190ms 1s190ms 08 1 1s193ms 1s193ms 09 3 3s581ms 1s193ms 10 5 5s981ms 1s196ms 11 1 1s184ms 1s184ms 12 3 3s575ms 1s191ms 14 2 2s344ms 1s172ms 15 1 1s171ms 1s171ms 17 3 3s513ms 1s171ms 18 2 2s320ms 1s160ms 19 1 1s125ms 1s125ms 20 2 2s296ms 1s148ms 21 1 1s170ms 1s170ms 22 3 3s597ms 1s199ms 23 3 3s595ms 1s198ms Jul 29 00 1 1s145ms 1s145ms 01 1 1s173ms 1s173ms 02 2 2s365ms 1s182ms 03 1 1s168ms 1s168ms 04 1 1s235ms 1s235ms 05 5 6s200ms 1s240ms 06 5 5s873ms 1s174ms 07 3 3s506ms 1s168ms 08 2 2s321ms 1s160ms 09 2 2s374ms 1s187ms 10 4 4s701ms 1s175ms 11 2 2s427ms 1s213ms 12 1 1s224ms 1s224ms 13 1 1s187ms 1s187ms 14 4 4s795ms 1s198ms 15 1 1s204ms 1s204ms 16 2 2s380ms 1s190ms 17 1 1s187ms 1s187ms 18 1 1s223ms 1s223ms 19 3 3s449ms 1s149ms 20 4 4s642ms 1s160ms 21 2 2s261ms 1s130ms 22 2 2s327ms 1s163ms 23 3 3s542ms 1s180ms Jul 30 00 1 1s171ms 1s171ms 01 2 2s310ms 1s155ms 03 2 2s418ms 1s209ms 05 3 3s634ms 1s211ms 06 3 3s450ms 1s150ms 07 4 4s762ms 1s190ms 08 5 5s967ms 1s193ms 09 3 3s687ms 1s229ms 10 4 4s614ms 1s153ms 12 1 1s196ms 1s196ms 13 4 4s754ms 1s188ms 14 2 2s316ms 1s158ms 16 9 10s641ms 1s182ms 17 4 4s724ms 1s181ms 18 3 3s533ms 1s177ms 19 2 2s325ms 1s162ms 20 2 2s345ms 1s172ms 21 4 4s680ms 1s170ms 22 2 2s357ms 1s178ms 23 4 5s72ms 1s268ms Jul 31 00 2 2s315ms 1s157ms 01 4 4s724ms 1s181ms 02 3 3s531ms 1s177ms 03 4 4s742ms 1s185ms 04 2 2s302ms 1s151ms 05 5 6s92ms 1s218ms 06 1 1s222ms 1s222ms 08 2 2s350ms 1s175ms 09 1 1s192ms 1s192ms 10 4 4s870ms 1s217ms 11 4 4s767ms 1s191ms 12 1 1s179ms 1s179ms 13 2 2s371ms 1s185ms 14 2 2s396ms 1s198ms 15 4 4s841ms 1s210ms 16 3 4s922ms 1s640ms 17 2 2s426ms 1s213ms 18 2 2s413ms 1s206ms 19 1 1s156ms 1s156ms 22 3 3s537ms 1s179ms 23 1 1s200ms 1s200ms Aug 01 00 5 5s828ms 1s165ms 01 1 1s182ms 1s182ms 02 2 2s367ms 1s183ms 03 2 2s280ms 1s140ms 04 2 2s327ms 1s163ms 05 4 4s972ms 1s243ms 06 1 1s205ms 1s205ms 07 3 3s670ms 1s223ms 08 3 3s536ms 1s178ms 09 1 1s187ms 1s187ms 10 1 1s158ms 1s158ms 11 1 1s230ms 1s230ms 12 6 7s212ms 1s202ms 13 2 2s387ms 1s193ms 14 3 3s614ms 1s204ms 15 3 3s599ms 1s199ms 16 2 2s400ms 1s200ms 17 5 6s48ms 1s209ms 18 5 6s24ms 1s204ms 19 6 7s151ms 1s191ms 20 1 1s191ms 1s191ms 21 1 1s194ms 1s194ms 22 2 2s349ms 1s174ms 23 1 1s211ms 1s211ms Aug 02 00 1 1s178ms 1s178ms 01 1 1s188ms 1s188ms 02 2 2s387ms 1s193ms 03 1 1s198ms 1s198ms 04 5 5s959ms 1s191ms 05 3 3s721ms 1s240ms 07 1 1s229ms 1s229ms 09 5 5s986ms 1s197ms 10 2 2s330ms 1s165ms 11 2 2s392ms 1s196ms 12 4 4s838ms 1s209ms 13 3 3s572ms 1s190ms 14 1 1s525ms 1s525ms 15 2 2s409ms 1s204ms 16 5 6s7ms 1s201ms 17 3 3s609ms 1s203ms 18 2 2s286ms 1s143ms 19 2 2s426ms 1s213ms 20 2 2s320ms 1s160ms 22 5 5s959ms 1s191ms 23 2 2s358ms 1s179ms Aug 03 00 4 4s749ms 1s187ms 01 6 7s191ms 1s198ms 02 3 3s621ms 1s207ms 03 3 3s647ms 1s215ms 04 2 2s382ms 1s191ms 05 8 9s764ms 1s220ms 06 7 8s314ms 1s187ms 07 4 4s740ms 1s185ms 08 4 4s778ms 1s194ms 09 2 2s381ms 1s190ms 10 2 2s408ms 1s204ms 11 2 2s369ms 1s184ms 12 1 1s138ms 1s138ms 13 1 1s224ms 1s224ms 14 1 1s190ms 1s190ms 15 3 3s637ms 1s212ms 16 3 3s668ms 1s222ms 17 3 3s576ms 1s192ms 18 1 1s191ms 1s191ms 19 5 5s704ms 1s140ms 20 5 5s704ms 1s140ms 21 5 5s790ms 1s158ms 22 2 2s313ms 1s156ms 23 1 1s195ms 1s195ms [ User: pubeu - Total duration: 5m - Times executed: 253 ]
[ User: qaeu - Total duration: 3s732ms - Times executed: 3 ]
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2071555' or receptorTerm.id = '2071555' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-31 16:20:46 Duration: 2s190ms Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1450186' or receptorTerm.id = '1450186' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-08-02 14:30:27 Duration: 1s525ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2063600' or receptorTerm.id = '2063600' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-31 16:20:50 Duration: 1s460ms Database: ctdprd51 User: pubeu Bind query: yes
3 303 20m35s 3s819ms 16s97ms 4s78ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 28 00 1 3s970ms 3s970ms 01 19 1m17s 4s83ms 02 2 7s984ms 3s992ms 03 1 4s40ms 4s40ms 04 1 3s917ms 3s917ms 05 1 5s536ms 5s536ms 06 1 3s918ms 3s918ms 07 1 3s919ms 3s919ms 10 5 19s864ms 3s972ms 11 1 3s934ms 3s934ms 12 1 3s905ms 3s905ms 14 4 15s778ms 3s944ms 15 2 20s51ms 10s25ms 18 1 3s979ms 3s979ms 20 1 4s13ms 4s13ms 22 1 3s939ms 3s939ms 23 2 7s788ms 3s894ms Jul 29 00 2 8s116ms 4s58ms 01 2 7s935ms 3s967ms 02 1 3s984ms 3s984ms 03 2 7s846ms 3s923ms 05 1 3s869ms 3s869ms 06 1 3s930ms 3s930ms 07 3 12s47ms 4s15ms 08 2 7s887ms 3s943ms 09 2 8s165ms 4s82ms 10 7 40s29ms 5s718ms 11 1 3s911ms 3s911ms 12 3 12s332ms 4s110ms 13 2 7s860ms 3s930ms 15 2 8s20ms 4s10ms 20 1 4s66ms 4s66ms 22 2 7s988ms 3s994ms 23 3 12s412ms 4s137ms Jul 30 00 1 4s178ms 4s178ms 01 1 4s34ms 4s34ms 03 1 4s552ms 4s552ms 05 2 7s920ms 3s960ms 06 1 3s918ms 3s918ms 07 6 24s985ms 4s164ms 08 6 24s27ms 4s4ms 09 5 20s385ms 4s77ms 10 5 19s877ms 3s975ms 11 1 3s980ms 3s980ms 13 2 7s947ms 3s973ms 16 1 3s906ms 3s906ms 17 1 3s934ms 3s934ms 18 1 3s908ms 3s908ms 19 2 7s865ms 3s932ms 20 2 8s186ms 4s93ms 21 1 3s964ms 3s964ms 22 1 3s920ms 3s920ms 23 1 4s268ms 4s268ms Jul 31 01 2 7s806ms 3s903ms 02 1 3s954ms 3s954ms 04 1 3s903ms 3s903ms 05 15 59s763ms 3s984ms 06 1 3s947ms 3s947ms 08 1 4s93ms 4s93ms 09 2 7s993ms 3s996ms 10 5 19s582ms 3s916ms 11 1 3s906ms 3s906ms 13 3 12s361ms 4s120ms 14 4 15s576ms 3s894ms 15 1 3s837ms 3s837ms 17 1 3s900ms 3s900ms 18 3 11s639ms 3s879ms 23 1 4s63ms 4s63ms Aug 01 01 1 3s996ms 3s996ms 03 3 11s939ms 3s979ms 04 1 3s932ms 3s932ms 06 2 7s841ms 3s920ms 07 1 3s897ms 3s897ms 08 1 4s6ms 4s6ms 09 2 8s204ms 4s102ms 10 1 3s957ms 3s957ms 12 2 7s944ms 3s972ms 13 1 4s88ms 4s88ms 14 1 3s909ms 3s909ms 15 1 3s911ms 3s911ms 17 1 4s32ms 4s32ms 19 1 3s849ms 3s849ms 21 1 3s950ms 3s950ms 22 1 3s866ms 3s866ms 23 1 3s867ms 3s867ms Aug 02 00 30 1m58s 3s958ms 01 3 11s772ms 3s924ms 02 14 54s898ms 3s921ms 03 3 11s562ms 3s854ms 04 2 7s922ms 3s961ms 05 5 20s417ms 4s83ms 09 1 3s929ms 3s929ms 10 1 3s993ms 3s993ms 11 4 15s759ms 3s939ms 12 1 4s28ms 4s28ms 15 6 23s763ms 3s960ms 16 1 3s992ms 3s992ms 17 3 11s831ms 3s943ms 19 9 35s923ms 3s991ms 20 2 7s994ms 3s997ms 22 2 7s873ms 3s936ms 23 1 4s24ms 4s24ms Aug 03 00 1 4s21ms 4s21ms 02 4 15s714ms 3s928ms 04 2 8s783ms 4s391ms 05 3 12s18ms 4s6ms 06 4 17s157ms 4s289ms 07 1 3s945ms 3s945ms 08 4 15s913ms 3s978ms 10 4 16s116ms 4s29ms 11 1 4s11ms 4s11ms 12 1 3s871ms 3s871ms 13 1 3s977ms 3s977ms 15 1 3s967ms 3s967ms 17 1 3s929ms 3s929ms [ User: pubeu - Total duration: 11m47s - Times executed: 171 ]
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-28 15:05:19 Duration: 16s97ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1388675') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-29 10:30:10 Duration: 15s960ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1333416') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2024-07-28 05:57:36 Duration: 5s536ms Bind query: yes
4 197 48m12s 1s44ms 33m57s 14s680ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 30 10 182 47m10s 15s552ms 11 15 1m1s 4s94ms [ User: qaeu - Total duration: 33m57s - Times executed: 1 ]
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:27:50 Duration: 33m57s Database: ctdprd51 User: qaeu Bind query: yes
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:34:10 Duration: 6s174ms Bind query: yes
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:46:55 Duration: 5s863ms Bind query: yes
5 136 2m58s 1s176ms 1s717ms 1s311ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 28 01 1 1s338ms 1s338ms 02 2 2s593ms 1s296ms 04 2 2s597ms 1s298ms 05 3 4s77ms 1s359ms 06 1 1s318ms 1s318ms 07 1 1s505ms 1s505ms 11 1 1s274ms 1s274ms 15 1 1s246ms 1s246ms 16 1 1s245ms 1s245ms 18 2 2s740ms 1s370ms 19 1 1s273ms 1s273ms 22 2 2s539ms 1s269ms 23 1 1s298ms 1s298ms Jul 29 05 2 2s781ms 1s390ms 06 1 1s254ms 1s254ms 08 1 1s262ms 1s262ms 09 1 1s566ms 1s566ms 11 2 2s615ms 1s307ms 13 1 1s225ms 1s225ms 17 1 1s311ms 1s311ms 19 1 1s218ms 1s218ms 21 1 1s244ms 1s244ms 22 1 1s236ms 1s236ms Jul 30 03 1 1s280ms 1s280ms 05 2 2s778ms 1s389ms 09 2 3s163ms 1s581ms 17 1 1s233ms 1s233ms 20 2 2s599ms 1s299ms 23 1 1s348ms 1s348ms Jul 31 00 1 1s274ms 1s274ms 02 2 2s720ms 1s360ms 03 1 1s232ms 1s232ms 05 3 4s49ms 1s349ms 06 1 1s267ms 1s267ms 07 1 1s269ms 1s269ms 10 5 6s790ms 1s358ms 14 2 2s544ms 1s272ms 15 1 1s378ms 1s378ms 17 1 1s327ms 1s327ms 19 1 1s306ms 1s306ms 20 1 1s293ms 1s293ms 22 1 1s230ms 1s230ms 23 1 1s353ms 1s353ms Aug 01 03 1 1s256ms 1s256ms 05 3 4s103ms 1s367ms 10 3 3s916ms 1s305ms 11 1 1s252ms 1s252ms 12 1 1s354ms 1s354ms 13 1 1s284ms 1s284ms 14 4 5s239ms 1s309ms 15 1 1s306ms 1s306ms 18 1 1s233ms 1s233ms 20 1 1s265ms 1s265ms 21 6 7s742ms 1s290ms 23 1 1s336ms 1s336ms Aug 02 00 1 1s260ms 1s260ms 01 2 2s537ms 1s268ms 03 3 3s858ms 1s286ms 05 3 4s158ms 1s386ms 06 3 3s917ms 1s305ms 10 1 1s293ms 1s293ms 11 2 2s513ms 1s256ms 12 1 1s273ms 1s273ms 13 1 1s301ms 1s301ms 14 2 2s549ms 1s274ms 17 1 1s295ms 1s295ms 18 2 2s581ms 1s290ms 19 1 1s289ms 1s289ms 20 2 2s627ms 1s313ms 21 1 1s318ms 1s318ms Aug 03 01 2 2s638ms 1s319ms 03 1 1s270ms 1s270ms 04 1 1s314ms 1s314ms 05 5 6s680ms 1s336ms 09 1 1s305ms 1s305ms 10 1 1s212ms 1s212ms 11 1 1s363ms 1s363ms 12 2 2s538ms 1s269ms 14 1 1s323ms 1s323ms 15 1 1s284ms 1s284ms 16 1 1s308ms 1s308ms 18 1 1s249ms 1s249ms 19 1 1s249ms 1s249ms 20 2 2s373ms 1s186ms 22 1 1s290ms 1s290ms 23 2 2s646ms 1s323ms [ User: pubeu - Total duration: 1m36s - Times executed: 74 ]
[ User: qaeu - Total duration: 1s379ms - Times executed: 1 ]
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-30 09:35:26 Duration: 1s717ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-29 09:44:49 Duration: 1s566ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1226052') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-31 10:46:03 Duration: 1s537ms Bind query: yes
6 131 3m5s 1s214ms 3s497ms 1s418ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 28 03 1 1s335ms 1s335ms 05 2 2s872ms 1s436ms 07 1 1s279ms 1s279ms 10 1 1s344ms 1s344ms 13 3 3s980ms 1s326ms 17 1 1s245ms 1s245ms 19 4 5s78ms 1s269ms Jul 29 00 2 2s654ms 1s327ms 01 2 2s652ms 1s326ms 02 1 1s338ms 1s338ms 05 2 2s836ms 1s418ms 18 1 1s228ms 1s228ms 21 2 2s455ms 1s227ms 22 1 1s342ms 1s342ms Jul 30 02 1 1s248ms 1s248ms 04 2 2s646ms 1s323ms 05 5 6s731ms 1s346ms 06 1 1s345ms 1s345ms 09 4 5s690ms 1s422ms 11 1 1s266ms 1s266ms 13 1 1s381ms 1s381ms 14 2 2s620ms 1s310ms 15 1 1s225ms 1s225ms 16 2 2s528ms 1s264ms 17 3 3s906ms 1s302ms 20 1 1s359ms 1s359ms 23 1 1s238ms 1s238ms Jul 31 00 2 2s517ms 1s258ms 03 1 1s288ms 1s288ms 04 3 4s38ms 1s346ms 05 2 2s793ms 1s396ms 09 1 1s356ms 1s356ms 10 1 1s380ms 1s380ms 11 1 1s310ms 1s310ms 12 1 1s373ms 1s373ms 14 1 1s320ms 1s320ms 15 1 1s454ms 1s454ms 16 19 35s297ms 1s857ms 18 1 1s264ms 1s264ms 20 2 2s523ms 1s261ms Aug 01 00 2 2s649ms 1s324ms 01 1 1s355ms 1s355ms 02 2 2s674ms 1s337ms 04 1 1s395ms 1s395ms 05 3 4s205ms 1s401ms 07 1 1s313ms 1s313ms 11 1 1s380ms 1s380ms 16 1 1s340ms 1s340ms 17 1 1s279ms 1s279ms 18 2 2s636ms 1s318ms 19 2 2s608ms 1s304ms Aug 02 01 3 3s910ms 1s303ms 03 2 2s858ms 1s429ms 05 3 4s160ms 1s386ms 07 1 1s530ms 1s530ms 09 2 2s701ms 1s350ms 11 3 3s893ms 1s297ms 12 1 1s645ms 1s645ms 18 1 1s300ms 1s300ms 21 1 1s290ms 1s290ms Aug 03 03 1 1s331ms 1s331ms 04 1 1s302ms 1s302ms 05 3 4s162ms 1s387ms 08 1 1s431ms 1s431ms 11 1 1s379ms 1s379ms 14 1 1s324ms 1s324ms 18 1 1s904ms 1s904ms 21 1 1s583ms 1s583ms 22 2 2s522ms 1s261ms [ User: pubeu - Total duration: 2m8s - Times executed: 89 ]
[ User: qaeu - Total duration: 1s265ms - Times executed: 1 ]
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2085130') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2085130') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-31 16:20:42 Duration: 3s497ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2079959') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2079959') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-31 16:20:37 Duration: 3s193ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078150') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2078150') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2024-07-31 16:24:36 Duration: 2s550ms Database: ctdprd51 User: pubeu Bind query: yes
7 122 8m2s 1s21ms 23s802ms 3s954ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 28 00 2 2s138ms 1s69ms 01 1 2s393ms 2s393ms 02 1 1s338ms 1s338ms 03 1 2s347ms 2s347ms 04 1 3s381ms 3s381ms 07 2 2s879ms 1s439ms 10 1 2s366ms 2s366ms 11 1 1s93ms 1s93ms 15 1 1s42ms 1s42ms 18 1 1s181ms 1s181ms Jul 29 01 2 2s159ms 1s79ms 07 2 5s636ms 2s818ms 08 1 1s43ms 1s43ms 10 1 1s85ms 1s85ms 13 1 1s124ms 1s124ms 16 1 1s378ms 1s378ms Jul 30 05 1 6s801ms 6s801ms 07 1 1s170ms 1s170ms 09 2 8s372ms 4s186ms 10 2 3s538ms 1s769ms 11 1 1s107ms 1s107ms 14 2 2s219ms 1s109ms 19 1 1s394ms 1s394ms 23 5 7s638ms 1s527ms Jul 31 00 1 1s572ms 1s572ms 02 1 1s88ms 1s88ms 05 1 1s65ms 1s65ms 07 3 20s222ms 6s740ms 12 1 1s181ms 1s181ms 16 43 4m30s 6s283ms 18 1 1s374ms 1s374ms 19 1 1s56ms 1s56ms 20 1 2s305ms 2s305ms Aug 01 01 4 22s885ms 5s721ms 05 1 3s199ms 3s199ms 07 1 1s221ms 1s221ms 13 4 18s513ms 4s628ms 16 1 10s49ms 10s49ms 17 2 4s247ms 2s123ms 18 3 7s654ms 2s551ms 19 4 17s899ms 4s474ms 21 2 6s60ms 3s30ms 22 2 5s547ms 2s773ms Aug 02 01 1 2s675ms 2s675ms 02 1 5s26ms 5s26ms 10 1 1s171ms 1s171ms 16 1 1s236ms 1s236ms 18 1 1s403ms 1s403ms Aug 03 02 1 3s21ms 3s21ms 03 1 2s163ms 2s163ms 04 1 1s370ms 1s370ms 06 1 1s92ms 1s92ms 13 1 1s123ms 1s123ms [ User: pubeu - Total duration: 6m7s - Times executed: 87 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2073928') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-31 16:20:48 Duration: 23s802ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2082921') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-31 16:20:49 Duration: 20s45ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2084677') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2024-07-31 16:20:47 Duration: 18s744ms Database: ctdprd51 User: pubeu Bind query: yes
8 94 6m5s 1s 8s70ms 3s888ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 28 02 2 10s463ms 5s231ms 09 1 5s285ms 5s285ms 11 2 10s361ms 5s180ms 13 1 5s71ms 5s71ms 20 2 6s233ms 3s116ms 22 2 6s226ms 3s113ms Jul 29 01 1 5s217ms 5s217ms 04 4 21s68ms 5s267ms 05 2 10s638ms 5s319ms 07 1 1s40ms 1s40ms 08 1 1s5ms 1s5ms 09 2 10s288ms 5s144ms 12 1 1s127ms 1s127ms 16 2 6s745ms 3s372ms 18 1 1s88ms 1s88ms 19 1 5s574ms 5s574ms 20 1 5s764ms 5s764ms 22 1 1s175ms 1s175ms Jul 30 00 1 6s773ms 6s773ms 04 1 8s70ms 8s70ms 07 1 1s43ms 1s43ms 08 1 5s614ms 5s614ms 09 2 2s42ms 1s21ms 10 2 11s780ms 5s890ms 14 1 4s696ms 4s696ms 23 1 1s3ms 1s3ms Jul 31 02 1 5s292ms 5s292ms 05 2 5s838ms 2s919ms 09 2 9s533ms 4s766ms 10 2 5s998ms 2s999ms 11 1 1s33ms 1s33ms 13 1 1s26ms 1s26ms 16 3 20s386ms 6s795ms 20 1 5s263ms 5s263ms 22 2 10s636ms 5s318ms Aug 01 00 1 5s501ms 5s501ms 02 1 1s11ms 1s11ms 03 1 4s926ms 4s926ms 04 1 5s586ms 5s586ms 05 4 4s34ms 1s8ms 06 1 5s84ms 5s84ms 12 1 5s344ms 5s344ms 13 1 1s495ms 1s495ms 14 1 5s336ms 5s336ms 15 1 1s11ms 1s11ms 19 2 2s27ms 1s13ms 21 1 1s17ms 1s17ms Aug 02 00 1 1s 1s 01 1 5s11ms 5s11ms 02 1 1s20ms 1s20ms 05 1 1s5ms 1s5ms 10 2 10s509ms 5s254ms 11 1 5s262ms 5s262ms 14 2 10s743ms 5s371ms 23 1 5s283ms 5s283ms Aug 03 00 1 5s216ms 5s216ms 03 1 5s352ms 5s352ms 05 7 20s187ms 2s883ms 07 4 21s544ms 5s386ms 14 1 5s320ms 5s320ms 15 1 5s258ms 5s258ms [ User: pubeu - Total duration: 3m43s - Times executed: 53 ]
[ User: qaeu - Total duration: 4s89ms - Times executed: 4 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1264191' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-30 04:35:20 Duration: 8s70ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1308639' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-31 16:20:21 Duration: 7s707ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1429172' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2024-07-31 16:24:00 Duration: 7s142ms Bind query: yes
9 93 2m13s 1s348ms 2s213ms 1s440ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 28 05 2 2s816ms 1s408ms 19 1 1s399ms 1s399ms 23 1 1s402ms 1s402ms Jul 29 02 1 1s396ms 1s396ms 05 3 4s259ms 1s419ms 06 1 1s418ms 1s418ms 11 3 4s276ms 1s425ms 12 1 1s491ms 1s491ms 14 4 5s586ms 1s396ms 16 2 2s777ms 1s388ms 17 1 1s422ms 1s422ms 21 1 1s391ms 1s391ms 23 1 1s435ms 1s435ms Jul 30 00 1 1s601ms 1s601ms 02 1 2s213ms 2s213ms 03 2 2s900ms 1s450ms 04 3 4s504ms 1s501ms 05 3 4s195ms 1s398ms 06 1 1s423ms 1s423ms 09 2 3s685ms 1s842ms 10 1 1s406ms 1s406ms 12 1 1s388ms 1s388ms 21 1 1s354ms 1s354ms Jul 31 00 1 1s508ms 1s508ms 02 1 1s365ms 1s365ms 04 5 6s967ms 1s393ms 05 3 4s281ms 1s427ms 06 1 1s385ms 1s385ms 08 1 1s386ms 1s386ms 09 2 2s725ms 1s362ms 10 2 2s752ms 1s376ms 15 1 1s438ms 1s438ms 16 1 1s404ms 1s404ms 18 3 4s396ms 1s465ms 21 2 2s842ms 1s421ms Aug 01 00 1 1s361ms 1s361ms 01 1 1s417ms 1s417ms 03 1 1s417ms 1s417ms 05 3 4s282ms 1s427ms 07 1 1s465ms 1s465ms 10 2 2s707ms 1s353ms 13 1 1s485ms 1s485ms 16 1 1s466ms 1s466ms 21 1 1s356ms 1s356ms Aug 02 04 1 1s355ms 1s355ms 05 5 7s260ms 1s452ms 07 2 2s851ms 1s425ms 09 3 4s374ms 1s458ms 10 1 1s406ms 1s406ms 11 1 1s480ms 1s480ms Aug 03 05 3 4s410ms 1s470ms 08 1 1s361ms 1s361ms 10 2 2s825ms 1s412ms 18 1 1s473ms 1s473ms [ User: pubeu - Total duration: 1m12s - Times executed: 51 ]
-
SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-30 02:43:44 Duration: 2s213ms Bind query: yes
-
SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-30 09:11:59 Duration: 2s167ms Bind query: yes
-
SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2024-07-30 04:34:37 Duration: 1s605ms Database: ctdprd51 User: pubeu Bind query: yes
10 78 3m33s 1s15ms 6s150ms 2s740ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jul 28 04 4 5s142ms 1s285ms 12 1 1s15ms 1s15ms Jul 29 02 1 1s531ms 1s531ms 06 2 5s592ms 2s796ms 15 1 2s4ms 2s4ms Jul 30 05 1 2s205ms 2s205ms 06 1 2s134ms 2s134ms Jul 31 16 34 1m59s 3s519ms 22 1 1s245ms 1s245ms Aug 01 05 1 2s120ms 2s120ms 09 4 7s877ms 1s969ms 10 1 2s2ms 2s2ms 14 9 16s529ms 1s836ms 15 1 1s274ms 1s274ms 17 1 2s84ms 2s84ms 23 1 1s604ms 1s604ms Aug 02 07 9 27s682ms 3s75ms 11 1 2s55ms 2s55ms 17 1 1s240ms 1s240ms 18 1 1s948ms 1s948ms Aug 03 16 1 1s287ms 1s287ms 19 1 5s539ms 5s539ms [ User: pubeu - Total duration: 2m37s - Times executed: 52 ]
-
SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '651438' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '651438') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-31 16:21:46 Duration: 6s150ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '576526' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '576526') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-07-31 16:28:40 Duration: 5s933ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '651438' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '651438') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2024-08-02 07:19:54 Duration: 5s682ms Bind query: yes
11 72 44m59s 1s324ms 6m28s 37s492ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 29 10 12 1m26s 7s192ms 11 19 12m7s 38s270ms 12 8 8m2s 1m 19 6 1m7s 11s314ms 21 3 7m39s 2m33s 22 3 6m53s 2m17s 23 18 7m19s 24s404ms Jul 30 00 3 22s885ms 7s628ms [ User: load - Total duration: 13m38s - Times executed: 23 ]
[ Application: pg_bulkload - Total duration: 13m38s - Times executed: 23 ]
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-07-29 21:40:57 Duration: 6m28s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-07-29 22:08:36 Duration: 5m16s Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-07-29 11:07:28 Duration: 3m49s Bind query: yes
12 50 2m13s 1s37ms 17s81ms 2s673ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jul 29 02 1 1s542ms 1s542ms 04 4 8s499ms 2s124ms 05 1 1s607ms 1s607ms 23 3 5s868ms 1s956ms Jul 30 04 2 2s89ms 1s44ms 05 2 3s102ms 1s551ms 22 1 2s41ms 2s41ms Jul 31 10 6 6s680ms 1s113ms Aug 01 22 3 23s296ms 7s765ms 23 1 7s791ms 7s791ms Aug 02 02 1 17s81ms 17s81ms 09 23 51s188ms 2s225ms Aug 03 08 1 1s356ms 1s356ms 10 1 1s543ms 1s543ms [ User: pubeu - Total duration: 1m43s - Times executed: 38 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075879') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-08-02 02:40:52 Duration: 17s81ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2082511') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-08-01 22:58:30 Duration: 7s818ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2082511') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2024-08-01 23:01:18 Duration: 7s791ms Database: ctdprd51 User: pubeu Bind query: yes
13 50 1m58s 1s5ms 4s27ms 2s371ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 28 05 4 8s813ms 2s203ms 23 1 1s848ms 1s848ms Jul 29 04 1 3s325ms 3s325ms 05 4 8s819ms 2s204ms 06 5 11s1ms 2s200ms 12 1 1s930ms 1s930ms Jul 30 03 1 3s587ms 3s587ms 05 4 9s155ms 2s288ms 09 3 6s516ms 2s172ms 20 1 3s260ms 3s260ms Jul 31 05 4 8s744ms 2s186ms 10 2 4s394ms 2s197ms 15 2 4s405ms 2s202ms 16 1 4s27ms 4s27ms Aug 01 05 4 8s782ms 2s195ms 14 2 6s517ms 3s258ms 23 1 3s258ms 3s258ms Aug 02 05 4 8s692ms 2s173ms 13 2 3s836ms 1s918ms Aug 03 05 3 7s650ms 2s550ms [ User: pubeu - Total duration: 53s579ms - Times executed: 18 ]
[ User: qaeu - Total duration: 30s192ms - Times executed: 9 ]
-
WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '651438' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2024-07-31 16:21:44 Duration: 4s27ms Database: ctdprd51 User: pubeu Bind query: yes
-
WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '650196' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2024-07-30 03:07:57 Duration: 3s587ms Database: ctdprd51 User: pubeu Bind query: yes
-
WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '589967' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 2 ORDER BY sn.path;
Date: 2024-07-30 05:35:21 Duration: 3s581ms Bind query: yes
14 45 5m40s 1s60ms 24s887ms 7s559ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 30 17 6 1m6s 11s42ms Aug 02 14 39 4m33s 7s23ms [ User: pubeu - Total duration: 1m18s - Times executed: 10 ]
-
SELECT /* BatchChemGODAO */ 'd004317' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1282459)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-02 14:29:11 Duration: 24s887ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchChemGODAO */ 'd003907' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1291936)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-08-02 14:30:07 Duration: 24s798ms Bind query: yes
-
SELECT /* BatchChemGODAO */ 'd000077185' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1378552)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2024-07-30 17:41:59 Duration: 23s291ms Database: ctdprd51 User: pubeu Bind query: yes
15 45 1m6s 1s339ms 2s623ms 1s481ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 28 00 1 1s351ms 1s351ms 05 2 2s688ms 1s344ms 06 1 1s340ms 1s340ms 10 1 1s340ms 1s340ms 18 1 1s344ms 1s344ms 22 2 2s690ms 1s345ms Jul 29 04 1 1s345ms 1s345ms 05 2 2s728ms 1s364ms 07 1 1s388ms 1s388ms 08 1 1s349ms 1s349ms 10 1 1s358ms 1s358ms 13 1 1s344ms 1s344ms Jul 30 05 2 3s294ms 1s647ms 06 1 1s349ms 1s349ms 09 1 1s808ms 1s808ms 21 1 1s751ms 1s751ms Jul 31 03 1 1s357ms 1s357ms 05 2 2s738ms 1s369ms 09 1 1s362ms 1s362ms 10 2 2s864ms 1s432ms 16 5 10s410ms 2s82ms Aug 01 05 2 2s779ms 1s389ms 22 1 1s381ms 1s381ms Aug 02 05 2 2s773ms 1s386ms 06 1 1s395ms 1s395ms 17 1 1s400ms 1s400ms Aug 03 04 1 1s387ms 1s387ms 05 4 5s528ms 1s382ms 10 1 1s396ms 1s396ms 11 1 1s399ms 1s399ms [ User: pubeu - Total duration: 31s205ms - Times executed: 20 ]
[ User: qaeu - Total duration: 1s808ms - Times executed: 1 ]
-
SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-31 16:20:47 Duration: 2s623ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-31 16:20:46 Duration: 2s556ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2024-07-31 16:22:49 Duration: 2s369ms Database: ctdprd51 User: pubeu Bind query: yes
16 42 53s208ms 1s7ms 1s694ms 1s266ms select fg.nm fromgenesymbol, fg.acc_txt fromgeneacc, tg.nm togenesymbol, tg.acc_txt togeneacc, ft.nm fromtaxonnm, ft.secondary_nm fromtaxoncommonnm, ft.acc_txt fromtaxonacc, tt.nm totaxonnm, tt.secondary_nm totaxoncommonnm, tt.acc_txt totaxonacc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( select string_agg(ggt.throughput_txt, ? order by ggt.throughput_txt) from gene_gene_ref_throughput ggt where ggt.gene_gene_reference_id = ggr.id) throughput, count(*) over () fullrowcount from gene_gene_reference ggr inner join term fg on ggr.from_gene_id = fg.id inner join term tg on ggr.to_gene_id = tg.id inner join term ft on ggr.from_taxon_id = ft.id inner join term tt on ggr.to_taxon_id = tt.id where ggr.reference_id = ? order by fg.nm_sort, tg.nm_sort limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 28 05 4 4s977ms 1s244ms Jul 29 05 4 4s866ms 1s216ms 14 1 1s103ms 1s103ms Jul 30 05 4 5s894ms 1s473ms 09 2 2s434ms 1s217ms Jul 31 05 4 5s698ms 1s424ms 09 1 1s233ms 1s233ms 10 2 2s666ms 1s333ms 15 2 2s316ms 1s158ms 23 1 1s115ms 1s115ms Aug 01 04 1 1s74ms 1s74ms 05 4 4s824ms 1s206ms 11 1 1s7ms 1s7ms 16 1 1s143ms 1s143ms Aug 02 05 4 5s581ms 1s395ms 12 1 1s128ms 1s128ms Aug 03 05 4 5s103ms 1s275ms 07 1 1s38ms 1s38ms [ User: pubeu - Total duration: 17s796ms - Times executed: 15 ]
[ User: qaeu - Total duration: 10s290ms - Times executed: 8 ]
-
SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-07-31 05:43:12 Duration: 1s694ms Database: ctdprd51 User: qaeu Bind query: yes
-
SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-07-30 05:38:20 Duration: 1s682ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ReferenceGeneGeneIxnsDAO */ fg.nm fromGeneSymbol, fg.acc_txt fromGeneAcc, tg.nm toGeneSymbol, tg.acc_txt toGeneAcc, ft.nm fromTaxonNm, ft.secondary_nm fromTaxonCommonNm, ft.acc_txt fromTaxonAcc, tt.nm toTaxonNm, tt.secondary_nm toTaxonCommonNm, tt.acc_txt toTaxonAcc, ggr.experimental_sys_nm, ggr.experimental_sys_type, ( SELECT STRING_AGG(ggt.throughput_txt, ', ' ORDER BY ggt.throughput_txt) FROM gene_gene_ref_throughput ggt WHERE ggt.gene_gene_reference_id = ggr.id) throughput, COUNT(*) OVER () fullRowCount FROM gene_gene_reference ggr INNER JOIN term fg ON ggr.from_gene_id = fg.id INNER JOIN term tg ON ggr.to_gene_id = tg.id INNER JOIN term ft ON ggr.from_taxon_id = ft.id INNER JOIN term tt ON ggr.to_taxon_id = tt.id WHERE ggr.reference_id = '111363' ORDER BY fg.nm_sort, tg.nm_sort LIMIT 50;
Date: 2024-08-02 05:38:13 Duration: 1s600ms Bind query: yes
17 28 50s22ms 1s10ms 4s122ms 1s786ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 29 07 1 1s373ms 1s373ms Jul 30 02 1 3s290ms 3s290ms Jul 31 16 23 40s578ms 1s764ms Aug 01 17 1 1s10ms 1s10ms 19 1 2s210ms 2s210ms Aug 02 02 1 1s559ms 1s559ms [ User: pubeu - Total duration: 42s715ms - Times executed: 23 ]
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2072619') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-31 16:20:28 Duration: 4s122ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2080269') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-30 02:20:41 Duration: 3s290ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2073928') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-31 16:20:27 Duration: 2s817ms Database: ctdprd51 User: pubeu Bind query: yes
18 25 13m54s 32s930ms 33s580ms 33s367ms copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 28 06 1 33s284ms 33s284ms 10 1 33s330ms 33s330ms 14 1 33s242ms 33s242ms 18 1 33s312ms 33s312ms Jul 29 06 1 33s256ms 33s256ms 10 1 33s355ms 33s355ms 14 1 33s390ms 33s390ms 18 1 33s325ms 33s325ms Jul 30 06 1 33s528ms 33s528ms 10 1 33s530ms 33s530ms 14 1 33s440ms 33s440ms 18 1 33s366ms 33s366ms Jul 31 06 1 33s360ms 33s360ms 10 1 33s357ms 33s357ms 14 1 33s410ms 33s410ms 18 1 33s359ms 33s359ms Aug 01 06 1 33s376ms 33s376ms 10 1 33s434ms 33s434ms 14 1 33s515ms 33s515ms 18 1 33s326ms 33s326ms Aug 02 06 1 33s580ms 33s580ms 10 1 33s398ms 33s398ms 14 1 33s417ms 33s417ms 18 1 33s348ms 33s348ms Aug 03 19 1 32s930ms 32s930ms [ User: postgres - Total duration: 13m21s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m21s - Times executed: 24 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-02 06:05:35 Duration: 33s580ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-30 10:05:35 Duration: 33s530ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-30 06:05:35 Duration: 33s528ms Database: ctdprd51 User: postgres Application: pg_dump
19 25 5m58s 14s78ms 14s660ms 14s333ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 28 06 1 14s163ms 14s163ms 10 1 14s143ms 14s143ms 14 1 14s78ms 14s78ms 18 1 14s158ms 14s158ms Jul 29 06 1 14s166ms 14s166ms 10 1 14s216ms 14s216ms 14 1 14s318ms 14s318ms 18 1 14s426ms 14s426ms Jul 30 06 1 14s422ms 14s422ms 10 1 14s660ms 14s660ms 14 1 14s416ms 14s416ms 18 1 14s393ms 14s393ms Jul 31 06 1 14s395ms 14s395ms 10 1 14s351ms 14s351ms 14 1 14s458ms 14s458ms 18 1 14s351ms 14s351ms Aug 01 06 1 14s354ms 14s354ms 10 1 14s297ms 14s297ms 14 1 14s331ms 14s331ms 18 1 14s385ms 14s385ms Aug 02 06 1 14s368ms 14s368ms 10 1 14s354ms 14s354ms 14 1 14s389ms 14s389ms 18 1 14s489ms 14s489ms Aug 03 18 1 14s243ms 14s243ms [ User: postgres - Total duration: 5m58s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m58s - Times executed: 25 ]
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-30 10:00:17 Duration: 14s660ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-02 18:00:16 Duration: 14s489ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-31 14:00:16 Duration: 14s458ms Database: ctdprd51 User: postgres Application: pg_dump
20 25 5m51s 13s969ms 14s126ms 14s42ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 28 06 1 14s6ms 14s6ms 10 1 14s5ms 14s5ms 14 1 13s993ms 13s993ms 18 1 14s40ms 14s40ms Jul 29 06 1 14s62ms 14s62ms 10 1 14s13ms 14s13ms 14 1 13s969ms 13s969ms 18 1 14s44ms 14s44ms Jul 30 06 1 14s15ms 14s15ms 10 1 14s34ms 14s34ms 14 1 14s56ms 14s56ms 18 1 14s81ms 14s81ms Jul 31 06 1 14s53ms 14s53ms 10 1 14s126ms 14s126ms 14 1 14s31ms 14s31ms 18 1 14s41ms 14s41ms Aug 01 06 1 14s71ms 14s71ms 10 1 14s22ms 14s22ms 14 1 14s54ms 14s54ms 18 1 14s46ms 14s46ms Aug 02 06 1 14s34ms 14s34ms 10 1 14s54ms 14s54ms 14 1 14s105ms 14s105ms 18 1 14s37ms 14s37ms Aug 03 18 1 14s48ms 14s48ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-31 10:00:58 Duration: 14s126ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-02 14:00:57 Duration: 14s105ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-30 18:00:58 Duration: 14s81ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 1h58m26s 1h58m26s 1h58m26s 1 1h58m26s select pub1.maint_term_derive_data ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jul 30 06 1 1h58m26s 1h58m26s -
select pub1.maint_term_derive_data ();
Date: 2024-07-30 06:36:52 Duration: 1h58m26s Bind query: yes
2 1h35m59s 1h35m59s 1h35m59s 1 1h35m59s select pub1.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jul 30 02 1 1h35m59s 1h35m59s -
select pub1.maint_gene_chem_ref_gene_form_refresh ();
Date: 2024-07-30 02:39:46 Duration: 1h35m59s Bind query: yes
3 1h3m37s 1h3m37s 1h3m37s 1 1h3m37s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jul 30 03 1 1h3m37s 1h3m37s -
SELECT maint_term_derive_nm_fts ();
Date: 2024-07-30 03:46:14 Duration: 1h3m37s Bind query: yes
4 46m8s 46m8s 46m8s 1 46m8s vacuum full analyze;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jul 30 04 1 46m8s 46m8s -
VACUUM FULL ANALYZE;
Date: 2024-07-30 04:38:03 Duration: 46m8s Bind query: yes
-
VACUUM FULL ANALYZE;
Date: 2024-07-30 03:52:03 Duration: 0ms
5 39m58s 39m58s 39m58s 1 39m58s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.object_type where cd = ?), ( select current_date) from pub1.gene_chem_reference gcr, pub1.gene_go_annot gga, pub1.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jul 29 21 1 39m58s 39m58s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.GENE_GO_ANNOT gga, pub1.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub1.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 21:29:41 Duration: 39m58s Bind query: yes
6 37m25s 37m25s 37m25s 1 37m25s select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.object_type where cd = ?), ptr.term_id, ( select id from pub1.object_type where cd = ?), ( select current_date) from pub1.gene_chem_reference gcr, pub1.phenotype_term_reference ptr, pub1.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jul 29 20 1 37m25s 37m25s -
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub1.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub1.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub1.GENE_CHEM_REFERENCE gcr, pub1.PHENOTYPE_TERM_REFERENCE ptr, pub1.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in ( select gene_chem_reference_id from pub1.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 20:49:37 Duration: 37m25s Bind query: yes
7 34m20s 34m20s 34m20s 1 34m20s select i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) from edit.ixn i, edit.reference_ixn r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in (...) order by i.id asc;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jul 29 19 1 34m20s 34m20s -
SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;
Date: 2024-07-29 19:19:46 Duration: 34m20s Bind query: yes
8 33m42s 33m42s 33m42s 1 33m42s select pub1.maint_cached_value_refresh_data_metrics ();Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jul 30 07 1 33m42s 33m42s -
select pub1.maint_cached_value_refresh_data_metrics ();
Date: 2024-07-30 07:20:43 Duration: 33m42s Bind query: yes
-
select pub1.maint_cached_value_refresh_data_metrics ();
Date: 2024-07-30 07:16:29 Duration: 0ms
9 24m12s 24m12s 24m12s 1 24m12s insert into pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.gene_go_annot;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jul 29 18 1 24m12s 24m12s -
insert into pub1.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;
Date: 2024-07-29 18:37:00 Duration: 24m12s Bind query: yes
10 23m37s 23m37s 23m37s 1 23m37s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Aug 03 19 1 23m37s 23m37s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-03 19:00:30 Duration: 23m37s
11 23m33s 23m33s 23m33s 1 23m33s update pub1.gene_disease gd set exposure_reference_qty = ( select count(distinct reference_id) from pub1.gene_disease_reference gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub1.reference r where has_exposures = true));Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jul 30 00 1 23m33s 23m33s -
update pub1.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub1.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub1.REFERENCE r where has_exposures = true));
Date: 2024-07-30 00:58:37 Duration: 23m33s Bind query: yes
12 23m27s 23m27s 23m27s 1 23m27s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Aug 03 19 1 23m27s 23m27s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2024-08-03 19:40:58 Duration: 23m27s
13 16m20s 16m34s 16m25s 7 1h54m56s select maint_query_logs_archive ();Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jul 28 00 1 16m20s 16m20s Jul 29 00 1 16m21s 16m21s Jul 30 00 1 16m34s 16m34s Jul 31 00 1 16m26s 16m26s Aug 01 00 1 16m25s 16m25s Aug 02 00 1 16m24s 16m24s Aug 03 00 1 16m24s 16m24s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-30 00:16:35 Duration: 16m34s
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-07-31 00:16:27 Duration: 16m26s
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2024-08-01 00:16:27 Duration: 16m25s
14 1s292ms 17m13s 1m50s 14 25m48s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jul 28 00 1 1s489ms 1s489ms 10 1 1s514ms 1s514ms 13 1 2m4s 2m4s 16 1 1s447ms 1s447ms 23 1 3m37s 3m37s Jul 29 00 1 1s302ms 1s302ms Jul 30 06 1 1s292ms 1s292ms 07 1 1s602ms 1s602ms 14 1 17m13s 17m13s Jul 31 06 1 1s554ms 1s554ms Aug 01 08 1 2m37s 2m37s Aug 02 02 1 1s445ms 1s445ms 20 1 2s348ms 2s348ms Aug 03 09 1 1s597ms 1s597ms [ User: pubeu - Total duration: 25m43s - Times executed: 11 ]
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1235351') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-30 14:32:42 Duration: 17m13s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1242889') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-07-28 23:52:45 Duration: 3m37s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1249743') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2024-08-01 08:47:30 Duration: 2m37s Database: ctdprd51 User: pubeu Bind query: yes
15 1s101ms 49s566ms 39s776ms 3,217 1d11h32m42s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jul 28 04 1 1s428ms 1s428ms 10 4 9s494ms 2s373ms 14 1 5s35ms 5s35ms 15 1 2s888ms 2s888ms 16 1 4s901ms 4s901ms 22 1 2s674ms 2s674ms 23 1 4s95ms 4s95ms Jul 29 02 2 16s192ms 8s96ms 03 1 6s225ms 6s225ms 10 2 3s23ms 1s511ms 19 1 8s112ms 8s112ms 22 18 12m4s 40s254ms 23 87 57m14s 39s475ms Jul 30 00 85 57m10s 40s354ms 01 87 56m34s 39s22ms 02 84 54m55s 39s235ms 03 86 56m43s 39s575ms 04 83 57m20s 41s456ms 05 52 34m19s 39s604ms 06 37 24m49s 40s267ms 07 86 57m32s 40s140ms 08 87 57m4s 39s356ms 09 86 56m58s 39s750ms 10 80 57m8s 42s855ms 11 83 56m44s 41s15ms 12 86 56m38s 39s513ms 13 87 57m21s 39s558ms 14 86 56m41s 39s557ms 15 87 57m32s 39s687ms 16 88 57m14s 39s23ms 17 85 56m34s 39s935ms 18 86 57m11s 39s896ms 19 86 57m14s 39s936ms 20 86 57m16s 39s954ms 21 85 56m51s 40s132ms 22 86 56m54s 39s698ms 23 87 57m40s 39s776ms Jul 31 00 85 56m53s 40s155ms 01 85 57m2s 40s263ms 02 85 57m11s 40s369ms 03 85 57m11s 40s372ms 04 84 56m40s 40s480ms 05 51 34m27s 40s539ms 08 1 1s101ms 1s101ms 10 2 3s124ms 1s562ms 18 1 5s441ms 5s441ms 22 78 52m29s 40s372ms 23 85 57m9s 40s345ms Aug 01 00 84 56m43s 40s515ms 01 85 57m7s 40s327ms 02 85 57m10s 40s359ms 03 84 56m51s 40s613ms 04 84 56m59s 40s703ms 05 51 34m23s 40s452ms 06 1 3s12ms 3s12ms 19 1 4s26ms 4s26ms 23 1 2s717ms 2s717ms Aug 02 03 1 6s476ms 6s476ms 08 1 15s421ms 15s421ms 09 1 1s842ms 1s842ms 11 1 17s72ms 17s72ms 17 1 1s103ms 1s103ms Aug 03 11 1 6s523ms 6s523ms 14 1 18s455ms 18s455ms [ User: pubeu - Total duration: 1d8h39m15s - Times executed: 2944 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1866850;
Date: 2024-07-30 04:32:27 Duration: 49s566ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1865950;
Date: 2024-07-30 04:18:36 Duration: 48s458ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2075037') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 1865450;
Date: 2024-07-30 04:10:50 Duration: 47s244ms Database: ctdprd51 User: pubeu Bind query: yes
16 2s335ms 9m52s 38s591ms 21 13m30s select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, to_char(cdr.mod_tm, ?) from pub1.gene_chem_reference gcr, pub1.chem_disease_reference cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = ? and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jul 29 19 12 12m25s 1m2s 20 9 1m4s 7s173ms [ User: load - Total duration: 9m52s - Times executed: 1 ]
-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 19:32:29 Duration: 9m52s Database: ctdprd51 User: load Bind query: yes
-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 19:49:23 Duration: 45s567ms Bind query: yes
-
select distinct gcr.gene_id, cdr.disease_id, cdr.reference_id, cdr.chem_id as via_chem_id, cdr.ixn_id, TO_CHAR(cdr.mod_tm, 'YYYY-MM-DD') from pub1.GENE_CHEM_REFERENCE gcr, pub1.CHEM_DISEASE_REFERENCE cdr where gcr.chem_id = cdr.chem_id and cdr.source_cd = 'C' and gcr.id not in ( select gene_chem_reference_id from pub1.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2024-07-29 20:04:33 Duration: 45s69ms Bind query: yes
17 1s324ms 6m28s 37s492ms 72 44m59s select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jul 29 10 12 1m26s 7s192ms 11 19 12m7s 38s270ms 12 8 8m2s 1m 19 6 1m7s 11s314ms 21 3 7m39s 2m33s 22 3 6m53s 2m17s 23 18 7m19s 24s404ms Jul 30 00 3 22s885ms 7s628ms [ User: load - Total duration: 13m38s - Times executed: 23 ]
[ Application: pg_bulkload - Total duration: 13m38s - Times executed: 23 ]
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2024-07-29 21:40:57 Duration: 6m28s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub1.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2024-07-29 22:08:36 Duration: 5m16s Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2024-07-29 11:07:28 Duration: 3m49s Bind query: yes
18 32s930ms 33s580ms 33s367ms 25 13m54s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jul 28 06 1 33s284ms 33s284ms 10 1 33s330ms 33s330ms 14 1 33s242ms 33s242ms 18 1 33s312ms 33s312ms Jul 29 06 1 33s256ms 33s256ms 10 1 33s355ms 33s355ms 14 1 33s390ms 33s390ms 18 1 33s325ms 33s325ms Jul 30 06 1 33s528ms 33s528ms 10 1 33s530ms 33s530ms 14 1 33s440ms 33s440ms 18 1 33s366ms 33s366ms Jul 31 06 1 33s360ms 33s360ms 10 1 33s357ms 33s357ms 14 1 33s410ms 33s410ms 18 1 33s359ms 33s359ms Aug 01 06 1 33s376ms 33s376ms 10 1 33s434ms 33s434ms 14 1 33s515ms 33s515ms 18 1 33s326ms 33s326ms Aug 02 06 1 33s580ms 33s580ms 10 1 33s398ms 33s398ms 14 1 33s417ms 33s417ms 18 1 33s348ms 33s348ms Aug 03 19 1 32s930ms 32s930ms [ User: postgres - Total duration: 13m21s - Times executed: 24 ]
[ Application: pg_dump - Total duration: 13m21s - Times executed: 24 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-08-02 06:05:35 Duration: 33s580ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-30 10:05:35 Duration: 33s530ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2024-07-30 06:05:35 Duration: 33s528ms Database: ctdprd51 User: postgres Application: pg_dump
19 1s44ms 33m57s 14s680ms 197 48m12s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jul 30 10 182 47m10s 15s552ms 11 15 1m1s 4s94ms [ User: qaeu - Total duration: 33m57s - Times executed: 1 ]
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:27:50 Duration: 33m57s Database: ctdprd51 User: qaeu Bind query: yes
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:34:10 Duration: 6s174ms Bind query: yes
-
SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2024-07-30 10:46:55 Duration: 5s863ms Bind query: yes
20 14s78ms 14s660ms 14s333ms 25 5m58s copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jul 28 06 1 14s163ms 14s163ms 10 1 14s143ms 14s143ms 14 1 14s78ms 14s78ms 18 1 14s158ms 14s158ms Jul 29 06 1 14s166ms 14s166ms 10 1 14s216ms 14s216ms 14 1 14s318ms 14s318ms 18 1 14s426ms 14s426ms Jul 30 06 1 14s422ms 14s422ms 10 1 14s660ms 14s660ms 14 1 14s416ms 14s416ms 18 1 14s393ms 14s393ms Jul 31 06 1 14s395ms 14s395ms 10 1 14s351ms 14s351ms 14 1 14s458ms 14s458ms 18 1 14s351ms 14s351ms Aug 01 06 1 14s354ms 14s354ms 10 1 14s297ms 14s297ms 14 1 14s331ms 14s331ms 18 1 14s385ms 14s385ms Aug 02 06 1 14s368ms 14s368ms 10 1 14s354ms 14s354ms 14 1 14s389ms 14s389ms 18 1 14s489ms 14s489ms Aug 03 18 1 14s243ms 14s243ms [ User: postgres - Total duration: 5m58s - Times executed: 25 ]
[ Application: pg_dump - Total duration: 5m58s - Times executed: 25 ]
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-30 10:00:17 Duration: 14s660ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-08-02 18:00:16 Duration: 14s489ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2024-07-31 14:00:16 Duration: 14s458ms Database: ctdprd51 User: postgres Application: pg_dump
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 1s705ms 1 1s705ms 1s705ms 1s705ms select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub1.PHENOTYPE_TERM_REFERENCE ptr, pub1.IXN_AXN i where ptr.ixn_id = i.ixn_id;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Aug 03 00 1 1s705ms 1s705ms -
select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub1.PHENOTYPE_TERM_REFERENCE ptr, pub1.IXN_AXN i where ptr.ixn_id = i.ixn_id;
Date: 2024-07-30 00:27:51 Duration: 1s705ms Database: postgres
2 0ms 71 0ms 0ms 0ms ;Times Reported Time consuming bind #2
Day Hour Count Duration Avg duration Jul 29 06 2 0ms 0ms 10 2 0ms 0ms 13 4 0ms 0ms 16 2 0ms 0ms Jul 30 05 2 0ms 0ms 06 2 0ms 0ms 11 2 0ms 0ms Jul 31 11 2 0ms 0ms 15 4 0ms 0ms 16 2 0ms 0ms Aug 01 06 2 0ms 0ms 08 2 0ms 0ms 14 2 0ms 0ms 15 2 0ms 0ms Aug 02 00 1 0ms 0ms 06 3 0ms 0ms 07 3 0ms 0ms 10 3 0ms 0ms 13 9 0ms 0ms 14 3 0ms 0ms 15 6 0ms 0ms 16 9 0ms 0ms Aug 03 00 2 0ms 0ms [ User: pubeu - Total duration: 1m14s - Times executed: 44 ]
-
;
Date: Duration: 0ms Database: postgres parameters: $1 = '1216514', $2 = '1216514'
-
Events
Log levels
Key values
- 233,907 Log entries
Events distribution
Key values
- 0 PANIC entries
- 5 FATAL entries
- 36 ERROR entries
- 1314 WARNING entries
Most Frequent Errors/Events
Key values
- 1,039 Max number of times the same event was reported
- 1,355 Total events found
Rank Times reported Error 1 1,039 WARNING: skipping "..." --- only table or database owner can vacuum it
Times Reported Most Frequent Error / Event #1
Day Hour Count Jul 30 03 1,039 2 224 WARNING: skipping "..." --- only superuser or database owner can vacuum it
Times Reported Most Frequent Error / Event #2
Day Hour Count Jul 30 03 224 3 43 WARNING: skipping "..." --- only superuser can vacuum it
Times Reported Most Frequent Error / Event #3
Day Hour Count Jul 30 03 43 4 22 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #4
Day Hour Count Jul 29 19 4 20 2 Jul 30 18 9 19 4 Aug 01 20 1 Aug 02 18 2 5 6 WARNING: there is no transaction in progress
Times Reported Most Frequent Error / Event #5
Day Hour Count Jul 30 03 2 06 4 6 4 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #6
Day Hour Count Jul 29 10 1 Aug 01 15 2 Aug 02 10 1 - ERROR: relation "object_type" does not exist at character 84
- ERROR: relation "tm_reference_term" does not exist at character 15
- ERROR: relation "tm_reference_term" does not exist at character 15
Statement: select count(*) from edit.db_link where object_type_id = ( select id from object_type where cd = 'reference' );
Date: 2024-07-29 10:21:23 Database: ctdprd51 Application: pgAdmin 4 - CONN:2944719 User: load Remote:
Statement: select * from tm_reference_TERM LIMIT 100
Date: 2024-08-01 15:51:44 Database: ctdprd51 Application: pgAdmin 4 - CONN:7245958 User: load Remote:
Statement: select * from tm_reference_term LIMIT 100
Date: 2024-08-01 15:51:52
7 4 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #7
Day Hour Count Jul 28 04 1 Jul 30 13 1 Jul 31 03 1 Aug 03 11 1 - ERROR: syntax error in ts"1ZQJPX & <X> & /1ZQJPX & 9"
- ERROR: syntax error in ts"IF T 88"
- ERROR: syntax error in ts"ＴＲＩＰＬＥ ＮＥＧＡＴＩＶＥ ＢＲＥＡＳＴ ＮＥＯＰＬＡＳＭＳ"
Statement: SELECT /* BasicCountsDAO gen */ ii.cd ,COUNT(ii.id) cnt FROM (SELECT ot.cd ,tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops',$1) UNION SELECT 'reference' ,r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english',$2) OR r.id IN (SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $3 OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $4 OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $5 OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $6 ) ) UNION SELECT ot.cd ,l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper( l.acc_txt ) LIKE $7 OR upper( l.acc_txt ) LIKE $8 OR upper( l.acc_txt ) LIKE $9 OR upper( l.acc_txt ) LIKE $10 ) ) ii GROUP BY ii.cd
Date: 2024-07-28 04:56:23 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* BasicCountsDAO gen */ ii.cd ,COUNT(ii.id) cnt FROM (SELECT ot.cd ,tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops',$1) UNION SELECT 'reference' ,r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english',$2) OR r.id IN (SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $3 ) ) UNION SELECT ot.cd ,l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper( l.acc_txt ) LIKE $4 ) ) ii GROUP BY ii.cd
Date: 2024-07-30 13:47:39
Statement: SELECT /* MeshBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = $3 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2024-07-31 03:30:55 Database: ctdprd51 Application: User: pubeu Remote:
8 4 FATAL: password authentication failed for user "..."
Times Reported Most Frequent Error / Event #8
Day Hour Count Jul 30 08 4 - FATAL: password authentication failed for user "load"
Detail: Connection matched pg_hba.conf line 85: "host all all 192.168.201.0/24 md5 "
Date: 2024-07-30 08:31:13
9 2 WARNING: is not a PostgreSQL server process
Times Reported Most Frequent Error / Event #9
Day Hour Count Jul 31 11 2 10 1 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #10
Day Hour Count Jul 30 14 1 11 1 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #11
Day Hour Count Jul 30 14 1 12 1 ERROR: function get_ixn_prose(...) does not exist
Times Reported Most Frequent Error / Event #12
Day Hour Count Jul 29 10 1 - ERROR: function get_ixn_prose(integer) does not exist at character 66
Hint: No function matches the given name and argument types. You might need to add explicit type casts.
Statement: select reference_acc_txt ,taxon_acc_txt ,pubTerm.nm ,get_ixn_prose( ixn_id ) ,create_by ,create_tm from edit.reference_ixn ri ,pub2.term pubTerm where taxon_acc_txt not in ( select acc_txt from load.term where object_type_id = ( select id from edit.object_type where cd = 'taxon' ) ) and pubTerm.acc_txt = ri.taxon_acc_txt and object_type_id = ( select id from edit.object_type where cd = 'taxon' ) and taxon_acc_txt is not null and taxon_acc_txt <> ''Date: 2024-07-29 10:51:41
13 1 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #13
Day Hour Count Aug 01 15 1 - ERROR: column "reference_acc_txt" does not exist at character 8
Statement: select reference_acc_txt, * from edit.tm_reference_term trt ,edit.tm_reference tr where object_type_id = 1 and tr.id = trt.tm_reference_id LIMIT 100
Date: 2024-08-01 15:53:11
14 1 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #14
Day Hour Count Aug 02 10 1 - ERROR: syntax error at or near "'Underlying Term Name'" at character 90
Statement: -- This provides discrepancies introduced this month - it is NOT aggregate select nm as 'Underlying Term Name' ,acc_txt as 'Underlying Term Accession' ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where ( acc_txt, object_type_id ) not in ( -- Current Month's PUB select acc_txt, object_type_id from pubX.term ) order by acc_txt-- This provides discrepancies introduced this month - it is NOT aggregate select nm as 'Underlying Term Name' ,acc_txt as 'Underlying Term Accession' ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where ( acc_txt, object_type_id ) not in ( -- Current Month's PUB select acc_txt, object_type_id from pub1.term ) order by acc_txt-- This provides discrepancies introduced this month - it is NOT aggregate select nm as Underlying Term Name ,acc_txt as Underlying Term Accession ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where ( acc_txt, object_type_id ) not in ( -- Current Month's PUB select acc_txt, object_type_id from pub1.term ) order by acc_txt ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where ( acc_txt, object_type_id ) not in ( -- Current Month's PUB select acc_txt, object_type_id from pub1.term ) order by acc_txt " at character 156-- This provides discrepancies introduced this month - it is NOT aggregate select nm as "Underlying Term Name" ,acc_txt as Underlying_Term_Accession" ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where ( acc_txt, object_type_id ) not in ( -- Current Month's PUB select acc_txt, object_type_id from pub1.term ) order by acc_txt-- This provides discrepancies introduced this month - it is NOT aggregate select nm as Underlying_Term_Name ,acc_txt as Underlying_Term_Accession ,synonym ,reference_acc_txt ,notes ,create_by ,create_tm from edit.term_label where ( acc_txt, object_type_id ) not in ( -- Current Month's PUB select acc_txt, object_type_id from pubX.term ) order by acc_txt
Date: 2024-08-02 10:06:27 Database: ctdprd51 Application: pgAdmin 4 - CONN:7245958 User: load Remote:
15 1 ERROR: unterminated quoted identifier at or near ""..."
Times Reported Most Frequent Error / Event #15
Day Hour Count Jul 30 09 1 - ERROR: unterminated quoted identifier at or near "" " at character 198
Statement: --Should return 0 rows select cd, t.nm, t.nm_sort from pub1.term t ,pub1.object_type ot where upper( nm ) <> nm_sort and t.object_type_id = ot.id and cd <> 'pathway' order by cd, nm"
Date: 2024-07-30 09:26:46 Database: ctdprd51 Application: pgAdmin 4 - CONN:7245958 User: load Remote:
16 1 ERROR: invalid byte sequence for encoding
Times Reported Most Frequent Error / Event #16
Day Hour Count Jul 31 07 1 - ERROR: invalid byte sequence for encoding "UTF8": 0x00
Context: unnamed portal parameter $1
Statement: SELECT /* GeneIdBySymbolAccDAO */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li INNER JOIN term_label_type lti ON li.term_label_type_id = lti.id AND li.object_type_id = lti.object_type_id AND UPPER(li.nm) = $1 AND lti.object_type_id = 4 AND lti.nm = 'SYMBOL' UNION SELECT l.object_id FROM db_link l WHERE l.acc_txt = $2 AND l.object_type_id = 4 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2024-07-31 07:11:20 Database: ctdprd51 Application: User: pubeu Remote: