pgBadger-
Global information
- Generated on Sun Mar 2 04:15:20 2025
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20250301
- Parsed 409,309 log entries in 18s
- Log start from 2025-02-23 00:00:02 to 2025-03-01 23:59:24
-
Overview
Global Stats
- 692 Number of unique normalized queries
- 21,212 Number of queries
- 2d11h2m28s Total query duration
- 2025-02-23 00:00:17 First query
- 2025-03-01 23:59:24 Last query
- 11 queries/s at 2025-02-26 08:12:25 Query peak
- 2d11h2m28s Total query duration
- 4s311ms Prepare/parse total duration
- 1s266ms Bind total duration
- 2d11h2m22s Execute total duration
- 2,327 Number of events
- 25 Number of unique normalized events
- 1,045 Max number of times the same event was reported
- 0 Number of cancellation
- 10,531 Total number of automatic vacuums
- 318 Total number of automatic analyzes
- 2,974 Number temporary file
- 41.99 GiB Max size of temporary file
- 198.34 MiB Average size of temporary file
- 21,240 Total number of sessions
- 130 sessions at 2025-02-27 17:24:58 Session peak
- 319d10h16m2s Total duration of sessions
- 21m39s Average duration of sessions
- 0 Average queries per session
- 10s6ms Average queries duration per session
- 21m29s Average idle time per session
- 21,292 Total number of connections
- 92 connections/s at 2025-02-27 15:53:08 Connection peak
- 3 Total number of databases
SQL Traffic
Key values
- 11 queries/s Query Peak
- 2025-02-26 08:12:25 Date
SELECT Traffic
Key values
- 11 queries/s Query Peak
- 2025-02-26 08:12:25 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2025-02-27 06:01:00 Date
Queries duration
Key values
- 2d11h2m28s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Feb 23 00 147 0ms 24m51s 14s955ms 17s726ms 1m48s 24m56s 01 154 0ms 21s138ms 2s107ms 12s236ms 12s894ms 22s641ms 02 163 0ms 17m47s 11s932ms 21s312ms 3m12s 17m53s 03 145 0ms 4m7s 4s946ms 14s414ms 22s651ms 4m7s 04 139 0ms 17m51s 14s683ms 13s890ms 3m35s 17m57s 05 162 0ms 10s36ms 2s332ms 14s499ms 20s900ms 33s843ms 06 404 0ms 2m7s 4s306ms 58s773ms 1m1s 3m12s 07 139 0ms 21s423ms 2s618ms 16s473ms 24s403ms 46s205ms 08 146 0ms 5m18s 8s85ms 45s358ms 1m18s 5m18s 09 140 0ms 17s484ms 2s261ms 11s887ms 12s851ms 21s807ms 10 169 1s22ms 5m18s 5s265ms 18s35ms 56s29ms 5m18s 11 85 0ms 26s92ms 2s785ms 9s637ms 15s459ms 31s574ms 12 95 0ms 4m22s 5s511ms 9s473ms 16s256ms 4m40s 13 67 0ms 21s350ms 2s373ms 7s207ms 10s625ms 21s350ms 14 86 0ms 49s892ms 3s875ms 13s572ms 26s889ms 52s683ms 15 65 0ms 11s224ms 2s364ms 7s645ms 7s993ms 15s802ms 16 62 0ms 6s442ms 1s892ms 6s433ms 6s935ms 10s515ms 17 22 0ms 4s347ms 1s649ms 2s403ms 4s34ms 4s393ms 18 51 0ms 50s27ms 3s828ms 5s687ms 11s172ms 57s165ms 19 54 0ms 4m48s 7s204ms 5s977ms 7s899ms 4m48s 20 364 0ms 49s428ms 3s789ms 54s876ms 58s861ms 1m38s 21 101 0ms 3m27s 4s546ms 12s657ms 17s274ms 3m29s 22 91 0ms 11s284ms 2s277ms 9s279ms 10s990ms 13s912ms 23 172 0ms 1m15s 2s823ms 23s953ms 31s917ms 1m18s Feb 24 00 131 0ms 24m54s 22s439ms 10s541ms 50s395ms 43m31s 01 100 0ms 21s753ms 2s897ms 13s798ms 22s776ms 45s52ms 02 81 0ms 11s104ms 2s172ms 8s137ms 9s770ms 13s504ms 03 48 0ms 5s532ms 1s947ms 4s35ms 5s481ms 10s457ms 04 81 0ms 4s719ms 1s916ms 6s497ms 8s640ms 13s923ms 05 110 0ms 32s357ms 2s349ms 17s614ms 26s221ms 33s573ms 06 59 0ms 50s78ms 3s742ms 6s513ms 24s12ms 50s78ms 07 63 0ms 16s937ms 2s134ms 5s101ms 7s222ms 18s140ms 08 90 0ms 15s755ms 2s152ms 8s216ms 9s115ms 20s606ms 09 55 0ms 40s306ms 3s831ms 7s615ms 10s663ms 1m19s 10 82 0ms 50s104ms 3s884ms 11s170ms 23s995ms 1m5s 11 80 0ms 20s596ms 3s59ms 9s695ms 19s730ms 39s277ms 12 85 0ms 7s435ms 2s376ms 9s814ms 12s712ms 19s523ms 13 78 0ms 6s129ms 2s255ms 6s191ms 11s633ms 29s434ms 14 98 0ms 3m11s 5s851ms 13s776ms 57s123ms 3m12s 15 77 0ms 37s816ms 2s465ms 6s883ms 10s686ms 39s758ms 16 68 0ms 21s200ms 2s768ms 7s779ms 15s646ms 27s533ms 17 79 0ms 4m27s 8s682ms 13s112ms 23s389ms 5m18s 18 124 0ms 4m5s 5s245ms 16s196ms 52s583ms 4m9s 19 101 0ms 3m32s 5s565ms 10s929ms 25s903ms 3m34s 20 138 0ms 17s607ms 2s185ms 12s308ms 13s551ms 21s107ms 21 155 0ms 4m43s 4s108ms 12s348ms 21s761ms 4m43s 22 127 0ms 15s691ms 2s200ms 8s876ms 13s674ms 17s152ms 23 172 1s 4m5s 4s667ms 14s477ms 39s65ms 4m7s Feb 25 00 176 0ms 25m10s 13s402ms 16s99ms 3m9s 25m21s 01 194 0ms 3m15s 3s611ms 15s840ms 29s918ms 3m16s 02 193 0ms 21s216ms 2s89ms 12s27ms 17s321ms 29s556ms 03 231 0ms 17m52s 6s716ms 16s911ms 20s390ms 17m58s 04 211 0ms 1m2s 2s609ms 16s230ms 17s581ms 1m11s 05 252 0ms 5m26s 5s398ms 31s37ms 1m35s 5m37s 06 187 0ms 49s960ms 2s755ms 19s437ms 32s474ms 58s96ms 07 195 0ms 3m12s 4s15ms 13s659ms 17s435ms 3m25s 08 231 0ms 3m4s 3s365ms 22s881ms 37s724ms 3m10s 09 247 1s18ms 5m22s 10s730ms 4m48s 5m17s 5m29s 10 226 0ms 5m10s 4s806ms 25s47ms 46s52ms 6m4s 11 175 0ms 3m32s 3s355ms 11s533ms 19s707ms 3m45s 12 192 0ms 5m7s 5s885ms 20s39ms 2m1s 5m9s 13 172 0ms 3m15s 3s486ms 16s448ms 19s491ms 3m25s 14 177 0ms 4m45s 5s769ms 21s793ms 52s16ms 5m38s 15 161 0ms 6s298ms 2s79ms 10s818ms 12s234ms 16s595ms 16 210 0ms 11m33s 7s783ms 26s117ms 3m27s 11m42s 17 168 0ms 4m17s 7s666ms 23s414ms 3m36s 4m41s 18 227 0ms 1m54s 3s195ms 20s284ms 57s123ms 2m4s 19 216 0ms 5m26s 6s396ms 19s854ms 4m26s 5m32s 20 183 1s9ms 4m47s 6s770ms 19s457ms 3m20s 4m49s 21 224 0ms 2m30s 4s536ms 28s593ms 1m50s 2m34s 22 199 0ms 12m9s 9s573ms 33s564ms 3m37s 12m9s 23 205 0ms 5m29s 8s39ms 19s563ms 3m26s 10m40s Feb 26 00 171 0ms 25m41s 18s442ms 16s464ms 2m56s 25m51s 01 194 0ms 21s545ms 2s462ms 16s113ms 23s988ms 38s641ms 02 63 0ms 50s556ms 5s68ms 24s158ms 47s974ms 1m 03 2 0ms 24s16ms 12s690ms 0ms 0ms 25s380ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 145 0ms 4m48s 5s78ms 29s259ms 36s645ms 4m49s 06 201 0ms 4m28s 5s208ms 20s798ms 1m 4m37s 07 160 0ms 2m43s 3s213ms 13s752ms 16s292ms 2m45s 08 225 0ms 4m13s 4s946ms 39s427ms 1m42s 4m14s 09 184 0ms 4m21s 5s62ms 27s33ms 44s793ms 4m22s 10 204 0ms 17m46s 7s941ms 29s91ms 54s375ms 17m48s 11 169 0ms 5m11s 4s975ms 14s949ms 25s514ms 5m18s 12 192 0ms 21s794ms 2s462ms 16s140ms 18s938ms 24s531ms 13 163 0ms 4m59s 6s747ms 30s358ms 1m5s 5m8s 14 178 0ms 4m20s 8s49ms 1m28s 1m42s 7m28s 15 114 0ms 24s152ms 2s998ms 12s334ms 26s133ms 1m26s 16 36 0ms 5m2s 25s494ms 1m16s 1m30s 5m4s 17 31 0ms 17m52s 36s760ms 5s647ms 7s9ms 17m52s 18 54 0ms 50s593ms 4s323ms 10s840ms 32s132ms 50s593ms 19 31 0ms 4m46s 12s288ms 5s858ms 8s265ms 4m46s 20 50 0ms 15s608ms 2s546ms 7s87ms 14s142ms 18s712ms 21 48 0ms 5s559ms 1s866ms 5s857ms 6s522ms 8s584ms 22 51 0ms 5s910ms 1s701ms 3s475ms 7s216ms 11s962ms 23 67 0ms 27s98ms 3s36ms 13s21ms 26s304ms 34s646ms Feb 27 00 66 0ms 25m13s 25s463ms 6s245ms 15s686ms 25m21s 01 51 0ms 19s128ms 1s897ms 4s25ms 5s359ms 20s379ms 02 77 0ms 18s888ms 2s695ms 13s742ms 16s596ms 24s379ms 03 68 0ms 27s266ms 2s774ms 8s81ms 14s57ms 28s561ms 04 45 0ms 5s960ms 1s957ms 4s322ms 5s960ms 8s244ms 05 79 0ms 11m39s 10s794ms 5s753ms 24s57ms 11m40s 06 49 0ms 11m33s 18s594ms 15s140ms 41s947ms 11m33s 07 46 0ms 8s842ms 2s645ms 7s872ms 8s843ms 13s50ms 08 58 0ms 13h5m36s 13m49s 16s38ms 5m8s 13h5m37s 09 29 0ms 4m52s 17s766ms 6s357ms 42s305ms 4m52s 10 95 0ms 24m36s 34s878ms 1m50s 4m8s 24m36s 11 151 0ms 33m12s 29s74ms 1m11s 11m22s 33m32s 12 94 0ms 17m56s 17s627ms 9s620ms 16s798ms 18m43s 13 128 0ms 45m58s 30s978ms 1m24s 2m31s 46m9s 14 173 0ms 17m52s 18s536ms 2m8s 4m4s 17m52s 15 118 0ms 1m1s 5s325ms 33s176ms 59s671ms 1m38s 16 173 0ms 13m3s 15s426ms 2m13s 3m28s 13m4s 17 90 0ms 29m19s 28s442ms 19s845ms 2m44s 29m19s 18 88 0ms 50s763ms 4s34ms 13s916ms 27s497ms 57s513ms 19 108 0ms 1h45m57s 1m3s 16s822ms 1m34s 1h46m6s 20 128 0ms 1h1m46s 33s916ms 38s364ms 1m18s 1h1m57s 21 108 0ms 49m15s 31s867ms 10s458ms 44s1ms 49m33s 22 143 0ms 3m13s 3s696ms 17s18ms 28s565ms 3m13s 23 231 0ms 2h5m7s 37s323ms 29s12ms 53s442ms 2h5m45s Feb 28 00 134 0ms 35m11s 32s860ms 17s133ms 4m48s 35m17s 01 104 0ms 13s687ms 2s387ms 11s596ms 13s465ms 23s437ms 02 113 0ms 11m34s 9s367ms 10s666ms 24s13ms 11m36s 03 133 0ms 1m46s 3s464ms 12s482ms 25s70ms 1m51s 04 156 0ms 38s38ms 2s50ms 11s256ms 21s111ms 39s983ms 05 232 0ms 19s284ms 2s203ms 19s571ms 28s214ms 36s395ms 06 156 0ms 50s750ms 2s895ms 24s767ms 45s950ms 1m1s 07 93 0ms 21s533ms 2s565ms 9s654ms 16s691ms 25s943ms 08 98 0ms 22s179ms 2s546ms 12s192ms 14s628ms 23s389ms 09 113 0ms 15s675ms 2s903ms 12s721ms 18s396ms 48s886ms 10 135 0ms 5m20s 6s959ms 29s861ms 55s930ms 5m20s 11 164 0ms 34m25s 18s904ms 47s333ms 2m1s 34m35s 12 210 0ms 31s692ms 3s712ms 26s617ms 32s687ms 32s871ms 13 152 0ms 2m23s 4s504ms 24s176ms 27s474ms 2m47s 14 113 0ms 4m22s 7s775ms 38s943ms 1m31s 4m24s 15 109 0ms 19s165ms 2s464ms 11s659ms 16s283ms 20s752ms 16 105 0ms 36s581ms 2s769ms 15s931ms 20s61ms 36s581ms 17 102 0ms 18m29s 16s49ms 22s12ms 1m3s 18m31s 18 149 0ms 59s820ms 3s733ms 26s312ms 50s515ms 1m6s 19 111 0ms 56s943ms 3s213ms 13s810ms 16s361ms 1m6s 20 94 0ms 7s20ms 2s139ms 8s613ms 9s731ms 15s150ms 21 106 0ms 32s593ms 2s337ms 9s998ms 14s323ms 33s804ms 22 98 0ms 22s112ms 2s712ms 10s4ms 21s616ms 33s923ms 23 77 0ms 17s100ms 2s569ms 8s979ms 16s252ms 19s417ms Mar 01 00 123 0ms 25m25s 17s462ms 11s609ms 20s757ms 25m36s 01 129 0ms 29s412ms 3s11ms 15s420ms 30s728ms 38s415ms 02 88 0ms 15s241ms 2s597ms 8s764ms 9s133ms 25s343ms 03 109 0ms 22s765ms 2s594ms 11s355ms 17s232ms 44s984ms 04 96 0ms 22s573ms 3s109ms 12s188ms 22s261ms 32s83ms 05 138 0ms 17m49s 11s193ms 24s163ms 36s753ms 18m10s 06 108 0ms 17m48s 12s120ms 10s375ms 14s166ms 17m48s 07 105 0ms 15s238ms 2s779ms 11s356ms 17s218ms 22s708ms 08 96 0ms 8s580ms 2s402ms 9s795ms 13s922ms 18s109ms 09 99 0ms 16s45ms 2s289ms 12s800ms 19s438ms 30s161ms 10 122 0ms 18m11s 13s12ms 23s745ms 29s526ms 18m17s 11 102 0ms 26s99ms 2s535ms 10s913ms 21s714ms 26s99ms 12 86 0ms 22s500ms 2s758ms 9s868ms 13s124ms 28s10ms 13 79 0ms 16s593ms 2s469ms 9s908ms 11s898ms 23s470ms 14 67 0ms 7s890ms 2s569ms 9s753ms 10s939ms 13s268ms 15 99 0ms 4m31s 5s116ms 10s184ms 14s101ms 4m40s 16 95 0ms 9s73ms 2s365ms 8s507ms 10s633ms 17s541ms 17 100 0ms 17m45s 16s345ms 12s849ms 24s171ms 17m50s 18 116 0ms 5m2s 7s836ms 44s43ms 1m12s 5m5s 19 144 0ms 24m36s 43s184ms 2m8s 17m58s 24m42s 20 89 0ms 16s199ms 2s307ms 8s662ms 14s281ms 20s663ms 21 103 0ms 4m13s 7s105ms 19s851ms 46s123ms 4m14s 22 304 0ms 4m43s 8s787ms 1m20s 6m51s 10m43s 23 72 0ms 21s435ms 3s281ms 9s810ms 17s894ms 21s435ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Feb 23 00 144 0 15s195ms 9s78ms 17s726ms 4m44s 01 154 0 2s107ms 8s612ms 12s236ms 13s262ms 02 160 0 12s115ms 12s289ms 21s312ms 3m18s 03 143 0 4s979ms 10s696ms 14s414ms 2m15s 04 137 0 14s858ms 8s924ms 13s890ms 4m38s 05 155 0 2s329ms 9s372ms 11s618ms 26s670ms 06 392 10 4s316ms 53s395ms 58s773ms 1m16s 07 139 0 2s618ms 8s718ms 16s473ms 45s226ms 08 143 0 8s207ms 21s641ms 45s358ms 4m34s 09 134 0 2s239ms 8s576ms 10s489ms 13s551ms 10 156 10 5s322ms 11s235ms 18s35ms 1m19s 11 84 0 2s794ms 6s127ms 9s637ms 19s940ms 12 94 0 5s534ms 8s158ms 9s473ms 21s290ms 13 66 0 2s359ms 4s905ms 6s907ms 21s350ms 14 75 10 3s881ms 8s451ms 13s313ms 41s830ms 15 65 0 2s364ms 4s615ms 7s645ms 13s561ms 16 62 0 1s892ms 4s276ms 6s433ms 10s515ms 17 22 0 1s649ms 1s496ms 2s403ms 4s393ms 18 41 10 3s828ms 3s709ms 5s687ms 55s918ms 19 54 0 7s204ms 3s925ms 5s977ms 11s701ms 20 364 0 3s789ms 50s658ms 54s876ms 59s320ms 21 99 0 4s589ms 7s669ms 12s657ms 24s252ms 22 90 0 2s282ms 6s96ms 9s279ms 13s613ms 23 170 0 2s826ms 9s571ms 23s953ms 1m Feb 24 00 129 0 22s706ms 6s869ms 10s541ms 1m17s 01 98 0 2s888ms 5s21ms 13s798ms 27s778ms 02 81 0 2s172ms 5s785ms 8s137ms 11s104ms 03 47 0 1s946ms 3s356ms 4s35ms 7s210ms 04 78 0 1s891ms 4s166ms 6s497ms 9s737ms 05 103 0 2s353ms 4s363ms 16s578ms 26s895ms 06 49 10 3s742ms 4s325ms 6s513ms 41s617ms 07 62 0 2s122ms 3s904ms 5s101ms 9s525ms 08 88 0 2s143ms 5s400ms 8s216ms 9s263ms 09 55 0 3s831ms 4s18ms 7s615ms 12s186ms 10 68 10 3s939ms 8s627ms 15s560ms 41s583ms 11 79 0 3s62ms 6s300ms 9s695ms 20s596ms 12 84 0 2s376ms 6s82ms 9s814ms 19s523ms 13 77 0 2s248ms 5s175ms 6s191ms 11s633ms 14 88 10 5s851ms 6s578ms 10s748ms 1m24s 15 75 0 2s459ms 5s48ms 6s214ms 17s879ms 16 67 0 2s776ms 5s549ms 7s779ms 19s601ms 17 78 0 8s768ms 5s671ms 13s112ms 5m18s 18 112 10 5s288ms 9s454ms 24s45ms 50s169ms 19 96 0 5s735ms 5s717ms 9s434ms 2m6s 20 136 0 2s175ms 8s165ms 11s183ms 17s607ms 21 149 0 4s177ms 9s628ms 12s348ms 28s599ms 22 125 0 2s189ms 6s559ms 8s876ms 15s225ms 23 166 0 4s752ms 8s875ms 14s477ms 2m55s Feb 25 00 173 0 13s574ms 13s566ms 16s99ms 4m16s 01 191 0 3s632ms 10s933ms 15s840ms 1m26s 02 187 0 2s80ms 9s620ms 12s27ms 21s216ms 03 226 0 6s811ms 11s875ms 16s911ms 22s977ms 04 205 0 2s617ms 11s552ms 14s491ms 20s638ms 05 244 0 5s499ms 19s951ms 31s37ms 5m4s 06 173 10 2s769ms 10s898ms 19s349ms 41s616ms 07 189 0 4s65ms 10s501ms 13s659ms 3m10s 08 224 0 3s394ms 13s574ms 22s881ms 55s621ms 09 237 0 11s76ms 19s558ms 4m48s 5m26s 10 212 10 4s845ms 14s378ms 24s738ms 2m25s 11 168 0 3s383ms 8s816ms 11s533ms 24s374ms 12 187 0 5s982ms 12s260ms 17s875ms 4m8s 13 165 0 3s539ms 10s815ms 15s601ms 25s12ms 14 164 10 5s829ms 13s248ms 24s188ms 3m31s 15 153 0 2s56ms 8s411ms 10s818ms 12s927ms 16 204 0 7s940ms 14s792ms 26s117ms 3m43s 17 161 0 7s893ms 12s546ms 23s414ms 3m39s 18 212 10 3s210ms 11s435ms 20s284ms 57s123ms 19 211 0 6s495ms 12s333ms 19s854ms 5m25s 20 179 0 6s877ms 14s575ms 19s457ms 4m46s 21 221 0 4s564ms 16s710ms 28s593ms 2m20s 22 195 0 9s718ms 14s10ms 33s564ms 4m26s 23 199 0 8s207ms 13s359ms 19s563ms 4m49s Feb 26 00 165 0 18s997ms 12s199ms 16s464ms 17m40s 01 189 0 2s466ms 12s176ms 16s113ms 28s93ms 02 62 0 5s97ms 9s14ms 24s158ms 1m 03 2 0 12s690ms 0ms 0ms 25s380ms 04 0 0 0ms 0ms 0ms 0ms 05 139 0 5s201ms 17s301ms 29s259ms 4m49s 06 183 10 5s324ms 12s483ms 20s798ms 4m20s 07 157 0 3s222ms 10s806ms 13s225ms 16s556ms 08 219 0 5s3ms 18s283ms 39s427ms 1m49s 09 179 0 5s127ms 14s695ms 27s33ms 2m4s 10 178 10 8s372ms 12s765ms 22s878ms 50s614ms 11 168 0 4s993ms 12s556ms 14s949ms 2m21s 12 183 0 2s446ms 11s470ms 16s140ms 21s423ms 13 157 0 6s870ms 12s683ms 30s358ms 4m14s 14 162 10 7s431ms 21s799ms 1m28s 1m53s 15 114 0 2s998ms 6s756ms 12s334ms 30s207ms 16 36 0 25s494ms 3s338ms 1m16s 1m56s 17 31 0 36s760ms 1s944ms 5s647ms 7s991ms 18 44 10 4s323ms 2s592ms 10s840ms 41s624ms 19 31 0 12s288ms 2s710ms 5s858ms 30s307ms 20 49 0 2s529ms 4s46ms 7s87ms 18s712ms 21 48 0 1s866ms 3s240ms 5s857ms 8s584ms 22 51 0 1s701ms 2s683ms 3s475ms 8s886ms 23 67 0 3s36ms 6s80ms 13s21ms 34s646ms Feb 27 00 65 0 25s754ms 4s434ms 6s245ms 16s872ms 01 51 0 1s897ms 2s541ms 4s25ms 7s286ms 02 73 0 2s658ms 5s601ms 11s504ms 18s888ms 03 68 0 2s774ms 4s335ms 8s81ms 15s234ms 04 45 0 1s957ms 2s668ms 4s322ms 6s782ms 05 74 0 11s361ms 2s458ms 5s753ms 24s108ms 06 39 10 18s594ms 3s791ms 11s757ms 50s798ms 07 46 0 2s645ms 3s995ms 7s872ms 9s369ms 08 58 0 13m49s 3s590ms 16s38ms 8m38s 09 25 0 14s985ms 1s354ms 4s189ms 29s774ms 10 73 10 3s602ms 5s243ms 19s457ms 41s837ms 11 151 0 29s74ms 13s875ms 1m11s 17m56s 12 93 0 17s794ms 7s899ms 9s620ms 5m22s 13 125 0 31s54ms 13s555ms 46s798ms 7m11s 14 130 10 14s565ms 14s687ms 42s650ms 5m22s 15 118 0 5s325ms 11s317ms 33s176ms 1m2s 16 138 0 8s555ms 15s249ms 51s900ms 2m10s 17 80 0 7s397ms 8s764ms 17s554ms 5m11s 18 78 10 4s34ms 10s5ms 13s916ms 41s767ms 19 106 0 1m3s 7s408ms 11s815ms 1m34s 20 117 0 35s482ms 7s997ms 12s157ms 2m36s 21 103 0 4s475ms 6s873ms 9s548ms 44s1ms 22 142 0 3s697ms 9s812ms 17s18ms 33s774ms 23 230 0 37s471ms 17s538ms 29s12ms 9m3s Feb 28 00 133 0 33s60ms 10s258ms 17s133ms 25m43s 01 104 0 2s387ms 6s288ms 11s596ms 13s671ms 02 112 0 9s433ms 7s977ms 10s666ms 1m46s 03 133 0 3s464ms 9s992ms 12s482ms 58s148ms 04 156 0 2s50ms 8s433ms 11s256ms 21s572ms 05 228 0 2s202ms 13s985ms 19s571ms 33s329ms 06 146 10 2s895ms 10s115ms 24s224ms 50s750ms 07 93 0 2s565ms 6s373ms 9s654ms 18s867ms 08 98 0 2s546ms 7s808ms 12s192ms 21s798ms 09 113 0 2s903ms 9s484ms 12s721ms 26s869ms 10 123 10 7s29ms 19s383ms 36s670ms 58s802ms 11 164 0 18s904ms 21s263ms 47s333ms 5m30s 12 209 0 3s715ms 23s132ms 26s617ms 32s784ms 13 147 0 4s572ms 17s594ms 22s936ms 2m2s 14 102 10 7s831ms 9s136ms 38s943ms 2m10s 15 109 0 2s464ms 7s497ms 11s659ms 17s820ms 16 104 0 2s763ms 7s388ms 15s931ms 25s131ms 17 102 0 16s49ms 10s975ms 22s12ms 1m22s 18 139 10 3s733ms 11s483ms 26s312ms 50s855ms 19 111 0 3s213ms 6s628ms 13s810ms 48s724ms 20 94 0 2s139ms 5s580ms 8s613ms 11s994ms 21 106 0 2s337ms 6s990ms 9s998ms 24s848ms 22 97 0 2s706ms 5s777ms 10s4ms 28s397ms 23 77 0 2s569ms 6s371ms 8s979ms 17s100ms Mar 01 00 122 0 17s551ms 8s753ms 11s609ms 5m21s 01 128 0 3s8ms 9s440ms 15s48ms 32s716ms 02 88 0 2s597ms 6s666ms 8s764ms 15s241ms 03 108 0 2s587ms 7s818ms 11s355ms 19s664ms 04 96 0 3s109ms 8s525ms 12s188ms 29s59ms 05 132 0 11s599ms 8s952ms 24s163ms 1m33s 06 107 0 12s202ms 7s239ms 10s375ms 17s954ms 07 105 0 2s779ms 8s638ms 11s356ms 21s942ms 08 96 0 2s402ms 6s587ms 9s795ms 16s519ms 09 99 0 2s289ms 7s316ms 12s800ms 22s652ms 10 119 0 13s273ms 9s165ms 22s884ms 2m56s 11 101 0 2s531ms 6s80ms 10s913ms 25s595ms 12 86 0 2s758ms 6s561ms 9s868ms 24s685ms 13 78 0 2s458ms 5s817ms 7s623ms 18s476ms 14 67 0 2s569ms 6s250ms 9s753ms 11s981ms 15 99 0 5s116ms 7s541ms 10s184ms 15s163ms 16 95 0 2s365ms 7s200ms 8s507ms 12s751ms 17 100 0 16s345ms 9s603ms 12s849ms 4m51s 18 90 26 7s836ms 12s784ms 41s700ms 1m12s 19 94 48 43s745ms 1m11s 1m50s 24m27s 20 89 0 2s307ms 5s676ms 8s662ms 17s397ms 21 102 0 7s142ms 7s407ms 19s851ms 2m52s 22 304 0 8s787ms 32s909ms 1m20s 8m 23 72 0 3s281ms 7s556ms 9s810ms 21s435ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Feb 23 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Feb 24 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Feb 25 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Feb 26 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 1 0 0 0 8s919ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Feb 27 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 12 0 0 0 4m11s 0ms 0ms 4m8s 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 1 0 0 0 1s46ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 11 4 0 0 21s344ms 0ms 0ms 35s319ms 17 3 4 0 0 4m39s 0ms 0ms 1m29s 18 0 0 0 0 0ms 0ms 0ms 0ms 19 1 0 0 0 2m41s 0ms 0ms 0ms 20 1 0 0 0 1s309ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Feb 28 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Mar 01 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Feb 23 00 0 146 146.00 0.00% 01 0 154 154.00 0.00% 02 0 163 163.00 0.00% 03 0 146 146.00 0.00% 04 0 139 139.00 0.00% 05 0 162 162.00 0.00% 06 0 394 394.00 0.00% 07 0 175 175.00 0.00% 08 0 164 164.00 0.00% 09 0 144 144.00 0.00% 10 0 159 159.00 0.00% 11 0 85 85.00 0.00% 12 0 95 95.00 0.00% 13 0 67 67.00 0.00% 14 0 76 76.00 0.00% 15 0 65 65.00 0.00% 16 0 62 62.00 0.00% 17 0 22 22.00 0.00% 18 0 41 41.00 0.00% 19 0 54 54.00 0.00% 20 0 364 364.00 0.00% 21 0 101 101.00 0.00% 22 0 91 91.00 0.00% 23 0 172 172.00 0.00% Feb 24 00 0 130 130.00 0.00% 01 0 100 100.00 0.00% 02 0 81 81.00 0.00% 03 0 48 48.00 0.00% 04 0 81 81.00 0.00% 05 0 109 109.00 0.00% 06 0 64 64.00 0.00% 07 0 97 97.00 0.00% 08 0 91 91.00 0.00% 09 0 56 56.00 0.00% 10 0 72 72.00 0.00% 11 0 80 80.00 0.00% 12 0 86 86.00 0.00% 13 0 78 78.00 0.00% 14 0 95 95.00 0.00% 15 0 77 77.00 0.00% 16 0 69 69.00 0.00% 17 0 88 88.00 0.00% 18 0 114 114.00 0.00% 19 0 104 104.00 0.00% 20 0 138 138.00 0.00% 21 0 155 155.00 0.00% 22 0 127 127.00 0.00% 23 0 172 172.00 0.00% Feb 25 00 0 178 178.00 0.00% 01 0 194 194.00 0.00% 02 0 193 193.00 0.00% 03 0 231 231.00 0.00% 04 0 211 211.00 0.00% 05 0 252 252.00 0.00% 06 0 193 193.00 0.00% 07 0 215 215.00 0.00% 08 0 248 248.00 0.00% 09 0 247 247.00 0.00% 10 0 216 216.00 0.00% 11 0 198 198.00 0.00% 12 0 192 192.00 0.00% 13 0 172 172.00 0.00% 14 0 167 167.00 0.00% 15 0 166 166.00 0.00% 16 0 228 228.00 0.00% 17 0 181 181.00 0.00% 18 0 217 217.00 0.00% 19 0 216 216.00 0.00% 20 0 183 183.00 0.00% 21 0 224 224.00 0.00% 22 0 199 199.00 0.00% 23 0 205 205.00 0.00% Feb 26 00 0 171 171.00 0.00% 01 0 194 194.00 0.00% 02 0 63 63.00 0.00% 03 0 2 2.00 0.00% 04 0 0 0.00 0.00% 05 0 145 145.00 0.00% 06 0 194 194.00 0.00% 07 0 203 203.00 0.00% 08 0 237 237.00 0.00% 09 0 184 184.00 0.00% 10 0 191 191.00 0.00% 11 0 194 194.00 0.00% 12 0 193 193.00 0.00% 13 0 162 162.00 0.00% 14 0 167 167.00 0.00% 15 0 113 113.00 0.00% 16 0 37 37.00 0.00% 17 0 28 28.00 0.00% 18 0 44 44.00 0.00% 19 0 31 31.00 0.00% 20 0 51 51.00 0.00% 21 0 48 48.00 0.00% 22 0 51 51.00 0.00% 23 0 67 67.00 0.00% Feb 27 00 0 65 65.00 0.00% 01 0 51 51.00 0.00% 02 0 77 77.00 0.00% 03 0 68 68.00 0.00% 04 0 45 45.00 0.00% 05 0 79 79.00 0.00% 06 0 39 39.00 0.00% 07 0 51 51.00 0.00% 08 0 59 59.00 0.00% 09 0 25 25.00 0.00% 10 0 86 86.00 0.00% 11 0 156 156.00 0.00% 12 0 106 106.00 0.00% 13 0 113 113.00 0.00% 14 0 154 154.00 0.00% 15 0 118 118.00 0.00% 16 1 164 164.00 0.60% 17 0 104 104.00 0.00% 18 0 78 78.00 0.00% 19 0 108 108.00 0.00% 20 0 129 129.00 0.00% 21 0 113 113.00 0.00% 22 0 143 143.00 0.00% 23 0 236 236.00 0.00% Feb 28 00 0 133 133.00 0.00% 01 0 104 104.00 0.00% 02 0 113 113.00 0.00% 03 0 133 133.00 0.00% 04 0 156 156.00 0.00% 05 0 233 233.00 0.00% 06 0 189 189.00 0.00% 07 0 102 102.00 0.00% 08 0 109 109.00 0.00% 09 0 109 109.00 0.00% 10 0 126 126.00 0.00% 11 0 182 182.00 0.00% 12 0 326 326.00 0.00% 13 0 161 161.00 0.00% 14 0 101 101.00 0.00% 15 0 109 109.00 0.00% 16 0 105 105.00 0.00% 17 0 102 102.00 0.00% 18 0 139 139.00 0.00% 19 0 111 111.00 0.00% 20 0 94 94.00 0.00% 21 0 106 106.00 0.00% 22 0 98 98.00 0.00% 23 0 77 77.00 0.00% Mar 01 00 0 121 121.00 0.00% 01 0 129 129.00 0.00% 02 0 88 88.00 0.00% 03 0 109 109.00 0.00% 04 0 96 96.00 0.00% 05 0 135 135.00 0.00% 06 0 108 108.00 0.00% 07 0 105 105.00 0.00% 08 0 96 96.00 0.00% 09 0 99 99.00 0.00% 10 0 122 122.00 0.00% 11 0 102 102.00 0.00% 12 0 86 86.00 0.00% 13 0 79 79.00 0.00% 14 0 67 67.00 0.00% 15 0 99 99.00 0.00% 16 0 95 95.00 0.00% 17 0 100 100.00 0.00% 18 0 90 90.00 0.00% 19 0 96 96.00 0.00% 20 0 89 89.00 0.00% 21 0 103 103.00 0.00% 22 0 305 305.00 0.00% 23 0 72 72.00 0.00% Day Hour Count Average / Second Feb 23 00 103 0.03/s 01 104 0.03/s 02 98 0.03/s 03 90 0.03/s 04 103 0.03/s 05 108 0.03/s 06 146 0.04/s 07 136 0.04/s 08 328 0.09/s 09 113 0.03/s 10 104 0.03/s 11 116 0.03/s 12 92 0.03/s 13 85 0.02/s 14 92 0.03/s 15 84 0.02/s 16 83 0.02/s 17 78 0.02/s 18 81 0.02/s 19 80 0.02/s 20 137 0.04/s 21 98 0.03/s 22 81 0.02/s 23 209 0.06/s Feb 24 00 163 0.05/s 01 98 0.03/s 02 98 0.03/s 03 83 0.02/s 04 95 0.03/s 05 102 0.03/s 06 88 0.02/s 07 88 0.02/s 08 105 0.03/s 09 98 0.03/s 10 90 0.03/s 11 90 0.03/s 12 93 0.03/s 13 87 0.02/s 14 94 0.03/s 15 80 0.02/s 16 76 0.02/s 17 95 0.03/s 18 93 0.03/s 19 86 0.02/s 20 98 0.03/s 21 127 0.04/s 22 96 0.03/s 23 99 0.03/s Feb 25 00 103 0.03/s 01 107 0.03/s 02 101 0.03/s 03 104 0.03/s 04 101 0.03/s 05 148 0.04/s 06 104 0.03/s 07 110 0.03/s 08 230 0.06/s 09 110 0.03/s 10 111 0.03/s 11 104 0.03/s 12 95 0.03/s 13 102 0.03/s 14 97 0.03/s 15 98 0.03/s 16 106 0.03/s 17 102 0.03/s 18 124 0.03/s 19 104 0.03/s 20 98 0.03/s 21 116 0.03/s 22 127 0.04/s 23 144 0.04/s Feb 26 00 114 0.03/s 01 110 0.03/s 02 144 0.04/s 03 212 0.06/s 04 79 0.02/s 05 133 0.04/s 06 114 0.03/s 07 108 0.03/s 08 471 0.13/s 09 423 0.12/s 10 215 0.06/s 11 120 0.03/s 12 113 0.03/s 13 160 0.04/s 14 114 0.03/s 15 109 0.03/s 16 99 0.03/s 17 81 0.02/s 18 95 0.03/s 19 76 0.02/s 20 94 0.03/s 21 91 0.03/s 22 99 0.03/s 23 90 0.03/s Feb 27 00 132 0.04/s 01 83 0.02/s 02 115 0.03/s 03 93 0.03/s 04 87 0.02/s 05 97 0.03/s 06 96 0.03/s 07 80 0.02/s 08 134 0.04/s 09 105 0.03/s 10 113 0.03/s 11 147 0.04/s 12 109 0.03/s 13 180 0.05/s 14 132 0.04/s 15 587 0.16/s 16 710 0.20/s 17 181 0.05/s 18 105 0.03/s 19 130 0.04/s 20 107 0.03/s 21 155 0.04/s 22 226 0.06/s 23 376 0.10/s Feb 28 00 192 0.05/s 01 90 0.03/s 02 106 0.03/s 03 133 0.04/s 04 124 0.03/s 05 134 0.04/s 06 200 0.06/s 07 99 0.03/s 08 106 0.03/s 09 132 0.04/s 10 122 0.03/s 11 134 0.04/s 12 98 0.03/s 13 116 0.03/s 14 102 0.03/s 15 122 0.03/s 16 98 0.03/s 17 106 0.03/s 18 103 0.03/s 19 132 0.04/s 20 139 0.04/s 21 109 0.03/s 22 101 0.03/s 23 92 0.03/s Mar 01 00 97 0.03/s 01 102 0.03/s 02 113 0.03/s 03 92 0.03/s 04 84 0.02/s 05 133 0.04/s 06 101 0.03/s 07 175 0.05/s 08 106 0.03/s 09 149 0.04/s 10 182 0.05/s 11 127 0.04/s 12 108 0.03/s 13 94 0.03/s 14 90 0.03/s 15 86 0.02/s 16 90 0.03/s 17 97 0.03/s 18 103 0.03/s 19 112 0.03/s 20 95 0.03/s 21 139 0.04/s 22 260 0.07/s 23 106 0.03/s Day Hour Count Average Duration Average idle time Feb 23 00 103 24m9s 23m48s 01 103 24m9s 24m5s 02 99 24m51s 24m32s 03 89 26m24s 26m15s 04 104 24m30s 24m11s 05 108 21m58s 21m54s 06 146 17m21s 17m9s 07 136 17m13s 17m10s 08 328 8m17s 8m13s 09 113 20m51s 20m48s 10 104 23m21s 23m12s 11 116 21m29s 21m27s 12 92 24m39s 24m34s 13 85 27m24s 27m22s 14 92 26m19s 26m15s 15 84 28m45s 28m44s 16 83 29m23s 29m21s 17 78 30m35s 30m34s 18 81 30m17s 30m14s 19 80 29m58s 29m53s 20 137 17m28s 17m18s 21 98 22m26s 22m22s 22 81 28m14s 28m12s 23 209 12m6s 12m4s Feb 24 00 163 14m17s 13m59s 01 98 24m37s 24m34s 02 98 25m6s 25m4s 03 83 28m39s 28m38s 04 95 25m47s 25m45s 05 102 23m3s 23m1s 06 88 27m7s 27m4s 07 88 27m59s 27m58s 08 105 23m56s 23m54s 09 98 24m33s 24m31s 10 90 26m55s 26m52s 11 90 27m55s 27m52s 12 93 23m45s 23m42s 13 87 28m10s 28m8s 14 94 25m45s 25m39s 15 80 29m27s 29m25s 16 76 30m48s 30m45s 17 95 26m23s 26m16s 18 93 26m30s 26m24s 19 86 27m53s 27m47s 20 98 25m17s 25m14s 21 127 16m15s 16m10s 22 96 25m51s 25m48s 23 99 24m3s 23m55s Feb 25 00 103 22m50s 22m27s 01 107 23m29s 23m22s 02 101 23m39s 23m35s 03 104 23m27s 23m12s 04 100 23m28s 23m22s 05 149 16m28s 16m19s 06 104 23m37s 23m32s 07 110 22m5s 21m58s 08 229 10m57s 10m54s 09 111 22m9s 21m45s 10 111 21m44s 21m34s 11 104 23m52s 23m46s 12 95 25m7s 24m55s 13 99 24m54s 24m48s 14 98 24m6s 23m56s 15 97 24m44s 24m41s 16 106 21m46s 21m30s 17 104 25m42s 25m30s 18 124 20m11s 20m6s 19 105 26m48s 26m35s 20 98 22m18s 22m5s 21 115 19m31s 19m22s 22 126 18m59s 18m44s 23 145 17m36s 17m25s Feb 26 00 115 21m22s 20m55s 01 110 21m44s 21m40s 02 134 16m9s 16m7s 03 220 13m28s 13m28s 04 79 30m41s 30m41s 05 135 21m19s 21m13s 06 114 21m10s 21m1s 07 107 22m31s 22m26s 08 471 5m32s 5m30s 09 423 5m28s 5m26s 10 208 11m50s 11m43s 11 118 20m42s 20m35s 12 112 21m21s 21m16s 13 159 15m10s 15m3s 14 115 22m7s 21m54s 15 108 21m57s 21m54s 16 100 23m51s 23m42s 17 82 39m31s 39m17s 18 99 47m14s 47m12s 19 80 48m50s 48m46s 20 95 33m29s 33m27s 21 91 24m19s 24m18s 22 99 25m18s 25m17s 23 90 26m22s 26m19s Feb 27 00 132 18m26s 18m13s 01 83 28m4s 28m3s 02 115 21m5s 21m3s 03 93 25m25s 25m23s 04 87 28m58s 28m57s 05 97 23m47s 23m39s 06 96 25m44s 25m34s 07 80 30m13s 30m12s 08 135 24m7s 18m11s 09 101 23m12s 23m7s 10 111 23m24s 22m54s 11 145 16m53s 16m23s 12 110 21m53s 21m38s 13 180 1h48m32s 1h48m10s 14 131 18m38s 18m13s 15 566 4m29s 4m28s 16 690 3m30s 3m26s 17 171 17m5s 16m50s 18 105 22m14s 22m11s 19 132 2h38m41s 2h37m49s 20 110 39m19s 38m39s 21 157 20m29s 20m7s 22 226 10m9s 10m6s 23 376 6m34s 6m11s Feb 28 00 193 14m38s 14m16s 01 90 26m53s 26m50s 02 106 22m54s 22m44s 03 133 18m3s 18m 04 124 19m41s 19m39s 05 134 18m14s 18m10s 06 200 11m48s 11m46s 07 99 25m32s 25m29s 08 106 22m42s 22m39s 09 126 19m37s 19m34s 10 122 19m55s 19m47s 11 133 17m55s 17m31s 12 97 24m51s 24m43s 13 117 20m4s 19m58s 14 99 24m7s 23m58s 15 122 20m50s 20m48s 16 97 24m53s 24m50s 17 107 22m12s 21m57s 18 103 23m29s 23m24s 19 132 18m33s 18m31s 20 139 16m38s 16m37s 21 109 22m51s 22m49s 22 105 42m53s 42m51s 23 97 1h9m10s 1h9m8s Mar 01 00 98 32m53s 32m31s 01 102 23m41s 23m38s 02 113 21m24s 21m22s 03 92 26m18s 26m15s 04 84 25m31s 25m27s 05 133 17m38s 17m27s 06 101 24m20s 24m7s 07 175 13m57s 13m55s 08 106 23m15s 23m13s 09 140 17m21s 17m19s 10 191 13m35s 13m27s 11 127 19m6s 19m4s 12 108 22m50s 22m48s 13 94 24m58s 24m56s 14 90 28m7s 28m5s 15 86 27m14s 27m8s 16 90 27m22s 27m20s 17 97 24m22s 24m5s 18 102 24m9s 24m 19 113 22m2s 21m7s 20 95 25m10s 25m8s 21 139 16m37s 16m32s 22 260 9m29s 9m19s 23 105 22m40s 22m37s -
Connections
Established Connections
Key values
- 92 connections Connection Peak
- 2025-02-27 15:53:08 Date
Connections per database
Key values
- ctdprd51 Main Database
- 21,292 connections Total
Connections per user
Key values
- pubeu Main User
- 21,292 connections Total
-
Sessions
Simultaneous sessions
Key values
- 130 sessions Session Peak
- 2025-02-27 17:24:58 Date
Histogram of session times
Key values
- 11,704 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 21,240 sessions Total
Sessions per user
Key values
- pubeu Main User
- 21,240 sessions Total
User Count Total Duration Average Duration edit 9 3d18h3m23s 10h22s editeu 2,593 55d23h18m25s 31m4s load 176 5d14h32m 45m51s postgres 51 2h26m36s 2m52s pub1 1 27s559ms 27s559ms pub2 37 2d9h20m57s 1h32m59s pubc 13 13h32m27s 1h2m29s pubeu 12,993 115d1h43s 12m44s qaeu 5,362 112d4h59m36s 30m8s zbx_monitor 5 23d19h1m23s 4d18h12m16s Sessions per host
Key values
- 10.12.5.37 Main Host
- 21,240 sessions Total
Host Count Total Duration Average Duration 10.12.5.36 48 2h6m16s 2m37s 10.12.5.37 10,360 59d2h6m12s 8m12s 10.12.5.38 2,639 56d1h51m57s 30m35s 10.12.5.39 2,593 55d23h18m25s 31m4s 10.12.5.40 171 15h20m22s 5m22s 10.12.5.45 2,694 55d23h46m35s 29m55s 10.12.5.46 2,645 56d3h8m33s 30m33s 192.168.201.10 25 8d18h34s 8h24m1s 192.168.201.14 5 1d8h12m38s 6h26m31s 192.168.201.18 4 1d10h56m25s 8h44m6s ::1 56 23d21h28m 10h14m25s Sessions per application
Key values
- unknown Main Application
- 21,240 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 5,112,862 buffers Checkpoint Peak
- 2025-02-27 17:00:41 Date
- 1620.013 seconds Highest write time
- 1.247 seconds Sync time
Checkpoints Wal files
Key values
- 795 files Wal files usage Peak
- 2025-02-27 14:09:11 Date
Checkpoints distance
Key values
- 18,299.95 Mo Distance Peak
- 2025-02-27 21:05:36 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Feb 23 00 21,545 1,642.652s 0.004s 1,642.755s 01 544 54.602s 0.002s 54.632s 02 355 35.662s 0.001s 35.677s 03 53,711 1,857.678s 0.004s 1,858.177s 04 1,304 130.706s 0.003s 130.781s 05 1,017 101.973s 0.002s 102.006s 06 931 93.367s 0.002s 93.445s 07 2,049 205.229s 0.003s 205.267s 08 1,137 113.993s 0.004s 114.025s 09 1,199 120.206s 0.002s 120.284s 10 581 58.097s 0.001s 58.113s 11 3,618 362.491s 0.004s 362.587s 12 2,949 295.352s 0.003s 295.452s 13 1,020 102.267s 0.002s 102.297s 14 832 83.426s 0.003s 83.456s 15 537 53.878s 0.001s 53.894s 16 3,565 357.252s 0.005s 357.399s 17 401 40.345s 0.002s 40.374s 18 1,083 108.546s 0.003s 108.576s 19 590 59.276s 0.002s 59.306s 20 711 71.41s 0.002s 71.442s 21 5,179 518.828s 0.002s 518.899s 22 637 63.983s 0.003s 64.062s 23 822 82.489s 0.002s 82.517s Feb 24 00 52,779 1,634.877s 0.005s 1,635.38s 01 3,582 358.762s 0.002s 358.838s 02 211 21.236s 0.001s 21.251s 03 1,939 194.409s 0.004s 194.502s 04 2,405 241.065s 0.002s 241.108s 05 5,602 560.852s 0.001s 560.996s 06 9,738 975.23s 0.004s 975.274s 07 2,494 249.991s 0.002s 250.036s 08 542 54.392s 0.002s 54.422s 09 2,125 212.923s 0.003s 213.001s 10 64,756 1,630.375s 0.002s 1,630.857s 11 615 61.684s 0.002s 61.715s 12 13,504 1,351.826s 0.002s 1,351.961s 13 781 78.334s 0.003s 78.413s 14 751 75.233s 0.002s 75.249s 15 5,990 599.608s 0.003s 599.69s 16 1,261 126.374s 0.002s 126.452s 17 955 95.76s 0.003s 95.789s 18 1,088 109.056s 0.002s 109.086s 19 1,227 123.003s 0.002s 123.081s 20 423 42.36s 0.001s 42.374s 21 51,325 1,816.234s 0.002s 1,816.689s 22 294,904 1,935.492s 0.003s 1,936.422s 23 11,088 1,110.133s 0.003s 1,110.284s Feb 25 00 1,868 187.212s 0.003s 187.341s 01 352 35.255s 0.001s 35.269s 02 3,534 354.025s 0.002s 354.113s 03 52,378 2,201.148s 0.008s 2,201.68s 04 7,097 710.769s 0.003s 710.864s 05 1,219 122.1s 0.002s 122.13s 06 931 93.345s 0.001s 93.404s 07 6,686 669.43s 0.005s 669.602s 08 2,660 266.458s 0.001s 266.523s 09 7,092 710.3s 0.004s 710.43s 10 4,728 473.508s 0.001s 473.583s 11 9,836 985.33s 0.002s 985.463s 12 9,752 976.308s 0.002s 976.435s 13 3,671 367.037s 0.003s 367.115s 14 3,513 352.18s 0.002s 352.253s 15 3,841 384.77s 0.004s 384.911s 16 1,640 164.507s 0.003s 164.55s 17 1,898 190.238s 0.003s 190.318s 18 2,115 211.938s 0.002s 211.968s 19 773 77.438s 0.001s 77.5s 20 2,745 274.985s 0.003s 275.079s 21 801 80.254s 0.002s 80.269s 22 3,231 323.824s 0.004s 323.919s 23 767 76.823s 0.001s 76.838s Feb 26 00 6,580 659.138s 0.006s 659.322s 01 608 61.011s 0.002s 61.089s 02 431 43.286s 0.003s 43.316s 03 73 7.402s 0.001s 7.416s 04 0 0s 0s 0s 05 422 42.379s 0.001s 42.393s 06 1,400 140.246s 0.004s 140.276s 07 1,078 108.157s 0.004s 108.233s 08 1,882 188.678s 0.003s 188.696s 09 14,582 1,461.031s 0.004s 1,461.664s 10 54,372 1,906.802s 0.004s 1,906.917s 11 84,578 1,727.731s 0.255s 1,729.027s 12 60,753 1,619.539s 0.002s 1,620.112s 13 10,681 1,853.233s 0.029s 1,853.912s 14 264,894 825.152s 0.484s 843.39s 15 1,891 189.457s 0.003s 189.623s 16 26,267 1,860.878s 0.018s 1,872.275s 17 34,691 1,673.367s 0.003s 1,673.398s 18 1,151 115.399s 0.003s 115.43s 19 1,258 126.159s 0.003s 126.291s 20 3,392 340.038s 0.003s 340.156s 21 2,832 283.8s 0.004s 283.898s 22 3,581 358.841s 0.002s 358.927s 23 1,198 120.105s 0.003s 120.137s Feb 27 00 9,036 1,127.81s 0.005s 1,127.946s 01 1,271 127.372s 0.002s 127.457s 02 3,733 374.174s 0.003s 374.259s 03 52,715 1,678.502s 0.004s 1,678.66s 04 1,601 160.482s 0.002s 160.563s 05 1,936 194.066s 0.002s 194.141s 06 1,954 195.948s 0.002s 195.978s 07 2,661 266.677s 0.004s 266.757s 08 52,169 1,619.802s 0.001s 1,619.919s 09 8,175 820.909s 0.006s 821.283s 10 2,693,182 2,669.269s 1.114s 2,706.138s 11 978,511 3,238.412s 0.029s 3,245.851s 12 35,408 1,795.726s 0.004s 1,795.907s 13 6,372 638.295s 0.004s 643.096s 14 582,529 1,691.997s 0.704s 1,728.543s 15 476,261 1,811.303s 1.249s 1,816.298s 16 3,839,104 1,882.528s 0.011s 1,896.413s 17 6,689,807 2,150.339s 0.42s 2,180.987s 18 1,624,260 3,268.909s 0.006s 3,278.359s 19 853 85.54s 0.002s 85.554s 20 951,868 3,757.071s 0.724s 3,828.054s 21 32,460 445.599s 0.068s 497.414s 22 464,271 3,239.253s 0.012s 3,258.777s 23 673,496 4,120.088s 0.085s 4,127.311s Feb 28 00 561,231 1,941.768s 0.005s 1,946.074s 01 551 55.292s 0.003s 55.321s 02 2,154 215.836s 0.002s 215.974s 03 3,477 348.201s 0.002s 348.327s 04 669 67.02s 0.002s 67.052s 05 751 75.332s 0.004s 75.422s 06 6,795 680.574s 0.003s 680.707s 07 13,697 1,371.67s 0.004s 1,371.72s 08 1,104 110.605s 0.002s 110.635s 09 27,004 1,692.814s 0.004s 1,692.919s 10 1,169 117.111s 0.003s 117.151s 11 22,378 1,799.456s 0.004s 1,799.566s 12 11,497 1,151.827s 0.003s 1,151.918s 13 6,750 675.98s 0.004s 676.106s 14 3,249 325.346s 0.004s 325.419s 15 878 88.084s 0.003s 88.117s 16 1,909 191.341s 0.004s 191.372s 17 1,006 100.834s 0.003s 100.868s 18 1,193 119.84s 0.004s 119.876s 19 1,002 100.462s 0.004s 100.492s 20 1,231 123.392s 0.002s 123.428s 21 7,085 709.704s 0.004s 709.746s 22 1,178 118.081s 0.004s 118.112s 23 1,558 156.14s 0.003s 156.213s Mar 01 00 5,680 568.849s 0.003s 568.971s 01 497 49.874s 0.002s 49.906s 02 569 56.992s 0.002s 57.065s 03 2,635 263.975s 0.004s 264.049s 04 685 68.725s 0.003s 68.757s 05 56,836 1,641.895s 0.002s 1,642.095s 06 966 96.761s 0.002s 96.791s 07 694 69.592s 0.003s 69.635s 08 1,383 138.63s 0.003s 138.661s 09 685 68.735s 0.004s 68.767s 10 1,198 120.122s 0.003s 120.207s 11 1,030 103.404s 0.003s 103.436s 12 889 89.152s 0.003s 89.183s 13 1,401 140.246s 0.004s 140.327s 14 1,352 135.096s 0.003s 135.14s 15 894 89.642s 0.003s 89.673s 16 1,163 116.578s 0.004s 116.609s 17 1,460 146.231s 0.003s 146.272s 18 5,438 545.006s 0.003s 545.089s 19 38,845 1,672.042s 0.003s 1,672.145s 20 1,048 105.045s 0.005s 105.076s 21 1,239 124.182s 0.003s 124.212s 22 1,705 170.861s 0.003s 170.942s 23 1,198 120.127s 0.004s 120.159s Day Hour Added Removed Recycled Synced files Longest sync Average sync Feb 23 00 0 0 3 80 0.001s 0.002s 01 0 0 0 41 0.001s 0.002s 02 0 0 0 21 0.001s 0.001s 03 0 0 35 87 0.001s 0.003s 04 0 0 1 53 0.001s 0.002s 05 0 0 0 39 0.001s 0.002s 06 0 0 1 34 0.001s 0.002s 07 0 0 0 129 0.001s 0.002s 08 0 0 0 125 0.001s 0.002s 09 0 0 1 77 0.001s 0.002s 10 0 0 0 23 0.001s 0.001s 11 0 0 1 50 0.002s 0.003s 12 0 0 2 36 0.001s 0.002s 13 0 0 0 28 0.001s 0.002s 14 0 0 0 20 0.001s 0.002s 15 0 0 0 17 0.001s 0.001s 16 0 0 2 52 0.001s 0.003s 17 0 0 0 21 0.001s 0.002s 18 0 0 0 22 0.001s 0.002s 19 0 0 0 22 0.001s 0.002s 20 0 0 0 32 0.001s 0.002s 21 0 0 3 40 0.001s 0.002s 22 0 0 1 21 0.001s 0.002s 23 0 0 0 35 0.001s 0.002s Feb 24 00 0 0 36 90 0.001s 0.002s 01 0 0 1 67 0.001s 0.002s 02 0 0 0 20 0.001s 0.001s 03 0 0 1 74 0.001s 0.003s 04 0 0 1 52 0.001s 0.002s 05 0 0 8 22 0.001s 0.001s 06 0 0 0 181 0.001s 0.003s 07 0 0 1 139 0.001s 0.002s 08 0 0 0 117 0.001s 0.002s 09 0 0 1 89 0.001s 0.002s 10 0 0 35 51 0.001s 0.002s 11 0 0 0 36 0.001s 0.002s 12 0 0 6 80 0.001s 0.002s 13 0 0 1 37 0.001s 0.002s 14 0 0 0 24 0.001s 0.001s 15 0 0 3 225 0.001s 0.003s 16 0 0 1 88 0.001s 0.002s 17 0 0 0 84 0.001s 0.002s 18 0 0 0 41 0.001s 0.002s 19 0 0 1 70 0.001s 0.002s 20 0 0 0 10 0.001s 0.001s 21 0 0 33 56 0.001s 0.002s 22 0 0 69 75 0.001s 0.003s 23 0 0 7 39 0.001s 0.002s Feb 25 00 0 0 2 82 0.001s 0.002s 01 0 0 0 23 0.001s 0.001s 02 0 0 2 48 0.001s 0.002s 03 0 0 36 65 0.005s 0.002s 04 0 0 1 80 0.001s 0.003s 05 0 0 0 40 0.001s 0.002s 06 0 0 1 28 0.001s 0.001s 07 0 0 4 157 0.001s 0.003s 08 0 0 1 76 0.001s 0.001s 09 0 0 4 103 0.001s 0.003s 10 0 0 2 37 0.001s 0.001s 11 0 0 5 79 0.001s 0.002s 12 0 0 5 87 0.001s 0.002s 13 0 0 1 133 0.001s 0.002s 14 0 0 1 89 0.001s 0.002s 15 0 0 2 167 0.001s 0.003s 16 0 0 0 133 0.001s 0.002s 17 0 0 1 86 0.001s 0.002s 18 0 0 0 29 0.001s 0.002s 19 0 0 1 11 0.001s 0.001s 20 0 0 1 47 0.001s 0.003s 21 0 0 0 11 0.001s 0.001s 22 0 0 1 46 0.001s 0.003s 23 0 0 0 9 0.001s 0.001s Feb 26 00 0 0 5 93 0.001s 0.003s 01 0 0 1 44 0.001s 0.002s 02 0 0 0 36 0.001s 0.002s 03 0 0 0 8 0.001s 0.001s 04 0 0 0 0 0s 0s 05 0 0 0 19 0.001s 0.001s 06 0 0 0 91 0.001s 0.002s 07 0 0 1 136 0.001s 0.002s 08 0 0 0 77 0.001s 0.001s 09 0 0 41 113 0.001s 0.002s 10 0 0 4 68 0.001s 0.002s 11 0 0 58 1,328 0.001s 0.003s 12 0 0 41 86 0.001s 0.001s 13 0 0 50 269 0.002s 0.002s 14 0 176 1,351 237 0.317s 0.009s 15 0 1 0 114 0.001s 0.002s 16 0 125 903 202 0.001s 0.003s 17 0 0 0 45 0.002s 0.002s 18 0 0 0 23 0.001s 0.002s 19 0 1 0 28 0.001s 0.002s 20 0 1 0 130 0.002s 0.002s 21 0 1 0 32 0.001s 0.002s 22 0 1 0 41 0.001s 0.002s 23 0 0 0 20 0.001s 0.002s Feb 27 00 0 5 0 82 0.001s 0.002s 01 0 1 0 43 0.001s 0.002s 02 0 1 0 57 0.001s 0.002s 03 0 35 0 66 0.002s 0.002s 04 0 1 0 30 0.001s 0.002s 05 0 1 0 39 0.001s 0.002s 06 0 0 0 45 0.001s 0.002s 07 0 1 0 143 0.001s 0.002s 08 0 37 0 72 0.001s 0.001s 09 0 97 0 244 0.001s 0.003s 10 0 0 2,690 358 0.162s 0.02s 11 0 0 595 457 0.001s 0.002s 12 0 1 0 174 0.001s 0.003s 13 0 0 339 121 0.001s 0.003s 14 0 350 2,572 179 0.687s 0.027s 15 0 128 251 134 1.242s 0.027s 16 0 0 973 159 0.004s 0.004s 17 0 741 2,153 672 0.158s 0.006s 18 0 0 767 207 0.001s 0.003s 19 0 0 0 22 0.001s 0.001s 20 0 288 4,902 789 0.376s 0.025s 21 0 1,169 3,089 337 0.008s 0.01s 22 0 2,646 1,023 177 0.001s 0.002s 23 0 39 573 197 0.049s 0.004s Feb 28 00 0 0 346 140 0.002s 0.002s 01 0 0 0 40 0.001s 0.002s 02 0 2 0 54 0.001s 0.002s 03 0 1 0 56 0.001s 0.002s 04 0 0 0 41 0.001s 0.002s 05 0 1 0 35 0.001s 0.002s 06 0 4 0 103 0.001s 0.002s 07 0 7 0 135 0.001s 0.002s 08 0 0 0 188 0.001s 0.002s 09 0 10 0 129 0.001s 0.002s 10 0 0 0 142 0.001s 0.002s 11 0 11 0 177 0.001s 0.002s 12 0 7 0 162 0.001s 0.002s 13 0 3 0 157 0.001s 0.002s 14 0 1 0 65 0.001s 0.002s 15 0 1 0 19 0.001s 0.002s 16 0 0 0 36 0.001s 0.002s 17 0 0 0 22 0.001s 0.002s 18 0 1 0 30 0.001s 0.002s 19 0 0 0 19 0.001s 0.002s 20 0 1 0 30 0.001s 0.002s 21 0 4 0 32 0.002s 0.002s 22 0 0 0 29 0.001s 0.002s 23 0 1 0 29 0.001s 0.002s Mar 01 00 0 3 0 77 0.001s 0.002s 01 0 0 0 36 0.001s 0.002s 02 0 1 0 37 0.001s 0.002s 03 0 1 0 47 0.001s 0.002s 04 0 0 0 36 0.001s 0.002s 05 0 38 0 48 0.001s 0.002s 06 0 0 0 38 0.001s 0.002s 07 0 1 0 28 0.001s 0.002s 08 0 0 0 40 0.001s 0.002s 09 0 0 0 28 0.001s 0.002s 10 0 1 0 30 0.001s 0.002s 11 0 0 0 28 0.002s 0.002s 12 0 0 0 28 0.001s 0.002s 13 0 1 0 31 0.001s 0.002s 14 0 1 0 29 0.001s 0.002s 15 0 0 0 18 0.001s 0.002s 16 0 0 0 27 0.001s 0.002s 17 0 1 0 33 0.001s 0.002s 18 0 2 0 49 0.001s 0.002s 19 0 1 0 25 0.001s 0.002s 20 0 0 0 26 0.002s 0.002s 21 0 0 0 20 0.001s 0.002s 22 0 1 0 27 0.001s 0.002s 23 0 0 0 19 0.001s 0.002s Day Hour Count Avg time (sec) Feb 23 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Feb 24 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Feb 25 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Feb 26 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Feb 27 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Feb 28 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Mar 01 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Feb 23 00 18,875.00 kB 34,344.00 kB 01 1,611.00 kB 28,128.00 kB 02 1,802.00 kB 24,239.00 kB 03 193,499.33 kB 364,428.67 kB 04 4,034.50 kB 433,906.50 kB 05 2,899.50 kB 352,134.50 kB 06 2,118.50 kB 285,669.50 kB 07 3,983.50 kB 232,136.50 kB 08 3,187.50 kB 188,624.00 kB 09 3,075.00 kB 153,400.50 kB 10 2,888.00 kB 131,197.00 kB 11 7,301.33 kB 108,416.33 kB 12 9,444.00 kB 85,004.50 kB 13 2,744.50 kB 69,416.00 kB 14 2,424.50 kB 56,683.50 kB 15 2,990.00 kB 48,744.00 kB 16 7,584.67 kB 41,490.33 kB 17 1,037.50 kB 32,146.50 kB 18 1,611.00 kB 26,332.00 kB 19 1,730.50 kB 21,649.00 kB 20 1,899.00 kB 17,875.00 kB 21 24,382.50 kB 44,642.00 kB 22 1,905.50 kB 36,531.50 kB 23 2,403.00 kB 30,009.50 kB Feb 24 00 294,241.00 kB 558,226.00 kB 01 11,157.50 kB 454,049.00 kB 02 1,219.00 kB 387,548.00 kB 03 3,462.67 kB 315,914.00 kB 04 7,384.50 kB 243,663.50 kB 05 58,980.00 kB 213,701.00 kB 06 25,874.33 kB 180,572.33 kB 07 8,023.50 kB 140,045.50 kB 08 1,512.00 kB 113,749.50 kB 09 6,516.50 kB 93,384.00 kB 10 285,770.00 kB 542,152.50 kB 11 1,800.50 kB 439,441.50 kB 12 50,982.50 kB 365,645.50 kB 13 2,322.50 kB 296,585.00 kB 14 3,103.00 kB 253,296.00 kB 15 17,109.33 kB 210,333.67 kB 16 3,370.00 kB 161,960.00 kB 17 2,951.50 kB 131,784.50 kB 18 2,793.50 kB 107,306.50 kB 19 3,141.50 kB 87,468.00 kB 20 2,649.00 kB 75,011.00 kB 21 275,296.50 kB 509,358.00 kB 22 377,092.67 kB 1,001,921.67 kB 23 54,921.50 kB 779,207.00 kB Feb 25 00 16,298.00 kB 634,313.50 kB 01 2,192.00 kB 541,146.00 kB 02 11,530.50 kB 464,766.50 kB 03 273,819.50 kB 450,063.50 kB 04 21,459.00 kB 410,939.00 kB 05 3,525.00 kB 315,999.00 kB 06 2,906.00 kB 269,930.00 kB 07 21,924.00 kB 225,012.33 kB 08 16,906.00 kB 183,701.00 kB 09 22,792.00 kB 155,286.33 kB 10 33,432.00 kB 128,926.00 kB 11 42,400.00 kB 118,125.00 kB 12 37,652.00 kB 100,192.00 kB 13 9,729.00 kB 85,335.50 kB 14 11,049.00 kB 71,513.00 kB 15 7,561.33 kB 56,761.33 kB 16 5,029.50 kB 44,804.00 kB 17 5,119.00 kB 37,288.00 kB 18 4,934.50 kB 31,126.00 kB 19 4,658.00 kB 27,245.00 kB 20 5,005.33 kB 23,116.33 kB 21 4,732.00 kB 19,560.00 kB 22 6,450.00 kB 17,229.67 kB 23 4,653.00 kB 14,836.00 kB Feb 26 00 26,791.33 kB 50,796.00 kB 01 1,982.50 kB 56,472.50 kB 02 1,101.00 kB 46,040.50 kB 03 352.00 kB 39,293.00 kB 04 0.00 kB 0.00 kB 05 2,697.00 kB 35,633.00 kB 06 2,598.50 kB 30,819.00 kB 07 3,520.00 kB 25,612.00 kB 08 11,539.00 kB 23,161.00 kB 09 71,741.50 kB 71,741.50 kB 10 291,489.00 kB 535,954.00 kB 11 316,985.67 kB 852,302.33 kB 12 661,213.00 kB 754,276.00 kB 13 156,874.00 kB 661,237.00 kB 14 6,383,856.75 kB 7,234,848.00 kB 15 6,185.00 kB 7,216,060.00 kB 16 5,614,813.00 kB 7,902,979.67 kB 17 3,365.50 kB 6,943,108.00 kB 18 3,422.00 kB 5,624,569.00 kB 19 3,835.00 kB 4,556,596.50 kB 20 5,666.50 kB 3,691,937.50 kB 21 8,935.50 kB 2,992,165.00 kB 22 10,558.00 kB 2,425,054.00 kB 23 3,851.50 kB 1,965,631.00 kB Feb 27 00 39,554.00 kB 1,598,489.00 kB 01 4,921.50 kB 1,296,855.00 kB 02 12,137.50 kB 1,052,100.00 kB 03 287,653.50 kB 907,465.00 kB 04 4,385.50 kB 735,940.50 kB 05 5,477.00 kB 597,061.00 kB 06 4,012.50 kB 484,520.50 kB 07 9,200.00 kB 394,156.00 kB 08 567,558.00 kB 567,558.00 kB 09 368,457.33 kB 684,339.33 kB 10 8,812,016.20 kB 8,813,066.80 kB 11 5,141,162.50 kB 8,449,655.00 kB 12 2,358.00 kB 6,571,297.00 kB 13 2,947,103.00 kB 6,304,297.33 kB 14 8,815,077.00 kB 8,830,261.60 kB 15 2,065,680.00 kB 7,524,323.33 kB 16 7,024,344.00 kB 8,672,448.50 kB 17 8,814,618.50 kB 8,920,171.25 kB 18 4,366,513.00 kB 8,306,500.33 kB 19 2,685.00 kB 6,831,850.00 kB 20 8,024,269.71 kB 8,470,667.50 kB 21 8,914,387.30 kB 9,183,529.80 kB 22 6,450,349.00 kB 8,820,599.00 kB 23 3,340,097.00 kB 7,894,471.67 kB Feb 28 00 3,096,875.00 kB 8,126,992.50 kB 01 1,859.50 kB 6,584,352.00 kB 02 4,908.00 kB 5,334,003.50 kB 03 15,876.50 kB 4,323,794.50 kB 04 2,130.50 kB 3,502,675.50 kB 05 2,134.00 kB 2,837,605.00 kB 06 28,812.00 kB 2,303,833.50 kB 07 67,826.00 kB 1,878,917.50 kB 08 3,493.00 kB 1,522,654.00 kB 09 77,313.50 kB 1,241,410.50 kB 10 5,328.50 kB 1,013,056.00 kB 11 85,524.50 kB 836,729.00 kB 12 60,360.00 kB 689,468.00 kB 13 21,941.00 kB 561,422.50 kB 14 10,065.00 kB 457,353.50 kB 15 2,768.00 kB 371,529.00 kB 16 4,068.50 kB 301,622.50 kB 17 3,374.50 kB 245,029.00 kB 18 3,230.00 kB 199,098.00 kB 19 3,262.00 kB 161,871.00 kB 20 3,351.50 kB 131,766.50 kB 21 32,919.00 kB 110,328.50 kB 22 3,832.50 kB 92,732.00 kB 23 4,751.50 kB 75,896.50 kB Mar 01 00 29,446.50 kB 65,942.00 kB 01 1,684.50 kB 55,073.50 kB 02 1,884.00 kB 44,959.00 kB 03 8,360.00 kB 37,415.00 kB 04 2,134.50 kB 31,288.50 kB 05 311,030.00 kB 589,122.00 kB 06 2,744.00 kB 477,696.00 kB 07 2,019.00 kB 387,318.00 kB 08 3,793.00 kB 314,328.50 kB 09 2,078.50 kB 255,118.50 kB 10 3,768.00 kB 207,202.50 kB 11 2,703.50 kB 168,516.50 kB 12 2,256.50 kB 136,920.50 kB 13 4,632.50 kB 111,581.50 kB 14 5,087.50 kB 91,496.00 kB 15 2,989.50 kB 74,701.50 kB 16 3,430.50 kB 61,165.50 kB 17 4,644.00 kB 50,290.50 kB 18 17,332.50 kB 44,125.50 kB 19 3,498.00 kB 36,411.00 kB 20 3,496.50 kB 30,155.00 kB 21 3,693.00 kB 25,122.50 kB 22 4,694.50 kB 21,135.50 kB 23 3,479.00 kB 17,928.50 kB -
Temporary Files
Size of temporary files
Key values
- 19.00 GiB Temp Files size Peak
- 2025-02-27 12:56:47 Date
Number of temporary files
Key values
- 24 per second Temp Files Peak
- 2025-02-27 20:40:59 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Feb 23 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Feb 24 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Feb 25 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Feb 26 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 20 250.48 MiB 12.52 MiB 11 0 0 0 12 0 0 0 13 310 3.98 GiB 13.15 MiB 14 496 22.77 GiB 47.02 MiB 15 0 0 0 16 202 19.43 GiB 98.47 MiB 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Feb 27 00 6 7.53 MiB 1.26 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 115 5.52 GiB 49.18 MiB 10 0 0 0 11 0 0 0 12 78 77.13 GiB 1012.53 MiB 13 96 87.13 GiB 929.41 MiB 14 245 101.12 GiB 422.63 MiB 15 175 16.82 GiB 98.43 MiB 16 166 32.44 GiB 200.11 MiB 17 0 0 0 18 0 0 0 19 0 0 0 20 659 86.39 GiB 134.23 MiB 21 355 72.83 GiB 210.07 MiB 22 0 0 0 23 0 0 0 Feb 28 00 9 8.24 GiB 936.97 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 42 41.99 GiB 1023.86 MiB 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Mar 01 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 1,193 70.92 GiB 8.00 KiB 1.00 GiB 60.88 MiB select * from pgbulkload.pg_bulkload (?);-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-02-27 13:54:42 Duration: 6m55s Database: ctdprd51 User: load Application: pg_bulkload
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-02-27 14:25:51 Duration: 5m20s
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-02-26 14:02:25 Duration: 4m20s
2 932 156.51 GiB 136.00 KiB 1.00 GiB 171.95 MiB vacuum full analyze;-
VACUUM FULL ANALYZE;
Date: 2025-02-27 21:21:37 Duration: 49m15s
-
VACUUM FULL ANALYZE;
Date: 2025-02-27 20:32:30 Duration: 0ms
3 75 74.32 GiB 330.84 MiB 1.00 GiB 1014.76 MiB select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;-
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in;
Date: 2025-02-27 13:42:49 Duration: 0ms
4 62 1.99 GiB 7.24 MiB 1.00 GiB 32.91 MiB cluster pub2.term;-
CLUSTER pub2.TERM;
Date: 2025-02-27 20:31:44 Duration: 58s452ms
-
CLUSTER pub2.TERM;
Date: 2025-02-27 20:30:54 Duration: 0ms
5 51 50.85 GiB 873.71 MiB 1.00 GiB 1021.05 MiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.object_type where cd = ?), ptr.term_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.phenotype_term_reference ptr, pub2.phenotype_term_reference ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;-
select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;
Date: 2025-02-27 12:56:45 Duration: 0ms
6 35 1.16 GiB 24.13 MiB 47.70 MiB 33.82 MiB vacuum full analyze ixn_actor;-
vacuum FULL analyze ixn_actor;
Date: 2025-02-27 09:49:32 Duration: 24s309ms
-
vacuum FULL analyze ixn_actor;
Date: 2025-02-27 09:49:14 Duration: 0ms Database: ctdprd51 User: edit Application: pgAdmin 4 - CONN:2164643
7 35 3.78 GiB 63.54 MiB 150.45 MiB 110.70 MiB vacuum full analyze db_link;-
vacuum FULL analyze db_link;
Date: 2025-02-27 09:51:33 Duration: 1m38s
-
vacuum FULL analyze db_link;
Date: 2025-02-27 09:50:13 Duration: 0ms
8 25 16.56 GiB 8.00 KiB 1.00 GiB 678.22 MiB alter table pub2.term_enrichment_agent add constraint term_enrichment_agent_pk primary key (term_id, enriched_term_id, agent_term_id);-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2025-02-27 16:37:21 Duration: 3m3s
-
ALTER TABLE pub2.term_enrichment_agent ADD CONSTRAINT term_enrichment_agent_pk PRIMARY KEY (term_id, enriched_term_id, agent_term_id);
Date: 2025-02-27 16:37:20 Duration: 0ms
9 25 380.84 MiB 9.82 MiB 20.08 MiB 15.23 MiB vacuum full analyze ixn;-
vacuum FULL analyze ixn;
Date: 2025-02-27 09:49:46 Duration: 7s578ms
-
vacuum FULL analyze ixn;
Date: 2025-02-27 09:49:41 Duration: 0ms
10 20 732.32 MiB 21.34 MiB 59.73 MiB 36.62 MiB cluster pub2.term_label;-
CLUSTER pub2.TERM_LABEL;
Date: 2025-02-27 20:32:20 Duration: 35s969ms
-
CLUSTER pub2.TERM_LABEL;
Date: 2025-02-27 20:31:50 Duration: 0ms
11 20 216.87 MiB 7.47 MiB 15.34 MiB 10.84 MiB vacuum full analyze term;-
vacuum FULL analyze TERM;
Date: 2025-02-27 09:49:27 Duration: 10s417ms
-
vacuum FULL analyze TERM;
Date: 2025-02-27 09:49:19 Duration: 0ms
12 20 12.89 GiB 8.00 KiB 1.00 GiB 660.05 MiB create unique index gene_disease_reference_ak1 on pub2.gene_disease_reference using btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2025-02-27 14:00:29 Duration: 3m13s
-
CREATE UNIQUE INDEX gene_disease_reference_ak1 ON pub2.gene_disease_reference USING btree (gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id);
Date: 2025-02-27 14:00:28 Duration: 0ms
13 15 7.16 GiB 8.00 KiB 1.00 GiB 488.93 MiB alter table pub2.gene_disease_reference add constraint gene_disease_reference_pk primary key (id);-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2025-02-27 13:57:15 Duration: 1m16s
-
ALTER TABLE pub2.gene_disease_reference ADD CONSTRAINT gene_disease_reference_pk PRIMARY KEY (id);
Date: 2025-02-27 13:57:15 Duration: 0ms Database: ctdprd51 User: pub2
14 15 11.83 GiB 290.77 MiB 1.00 GiB 807.39 MiB create index ix_term_enrich_agent_enr_term on pub2.term_enrichment_agent using btree (enriched_term_id);-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2025-02-27 16:39:09 Duration: 1m47s
-
CREATE INDEX ix_term_enrich_agent_enr_term ON pub2.term_enrichment_agent USING btree (enriched_term_id);
Date: 2025-02-27 16:39:08 Duration: 0ms
15 10 7.16 GiB 420.61 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_mod_tm on pub2.gene_disease_reference using btree (mod_tm);-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2025-02-27 14:11:42 Duration: 1m28s
-
CREATE INDEX ix_gene_disease_ref_mod_tm ON pub2.gene_disease_reference USING btree (mod_tm);
Date: 2025-02-27 14:11:42 Duration: 0ms
16 10 64.92 MiB 8.00 KiB 13.33 MiB 6.49 MiB alter table pub2.phenotype_term add constraint phenotype_term_pk primary key (phenotype_id, term_id);-
ALTER TABLE pub2.phenotype_term ADD CONSTRAINT phenotype_term_pk PRIMARY KEY (phenotype_id, term_id);
Date: 2025-02-27 16:54:09 Duration: 0ms
17 10 7.16 GiB 420.61 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_reference on pub2.gene_disease_reference using btree (reference_id);-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2025-02-27 14:06:50 Duration: 1m21s
-
CREATE INDEX ix_gene_disease_ref_reference ON pub2.gene_disease_reference USING btree (reference_id);
Date: 2025-02-27 14:06:50 Duration: 0ms
18 10 7.16 GiB 420.61 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_reference_ixn on pub2.gene_disease_reference using btree (ixn_id);-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2025-02-27 14:10:14 Duration: 1m25s
-
CREATE INDEX ix_gene_disease_reference_ixn ON pub2.gene_disease_reference USING btree (ixn_id);
Date: 2025-02-27 14:10:14 Duration: 0ms
19 10 7.16 GiB 420.61 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_dis_gene on pub2.gene_disease_reference using btree (disease_id, gene_id);-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2025-02-27 14:08:49 Duration: 1m58s
-
CREATE INDEX ix_gene_disease_ref_dis_gene ON pub2.gene_disease_reference USING btree (disease_id, gene_id);
Date: 2025-02-27 14:08:48 Duration: 0ms
20 10 7.16 GiB 255.49 MiB 1.00 GiB 733.38 MiB create index ix_gene_disease_ref_source_cd on pub2.gene_disease_reference using btree (source_cd);-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2025-02-27 14:02:28 Duration: 1m4s
-
CREATE INDEX ix_gene_disease_ref_source_cd ON pub2.gene_disease_reference USING btree (source_cd);
Date: 2025-02-27 14:02:27 Duration: 0ms
21 10 454.27 MiB 8.00 KiB 93.20 MiB 45.43 MiB create unique index chem_disease_reference_ak1 on pub2.chem_disease_reference using btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2025-02-27 14:16:19 Duration: 5s869ms
-
CREATE UNIQUE INDEX chem_disease_reference_ak1 ON pub2.chem_disease_reference USING btree (chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id);
Date: 2025-02-27 14:16:19 Duration: 0ms
22 10 7.16 GiB 420.61 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_disease on pub2.gene_disease_reference using btree (disease_id);-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2025-02-27 14:05:28 Duration: 1m26s
-
CREATE INDEX ix_gene_disease_ref_disease ON pub2.gene_disease_reference USING btree (disease_id);
Date: 2025-02-27 14:05:28 Duration: 0ms
23 10 161.54 MiB 8.00 KiB 33.23 MiB 16.15 MiB alter table pub2.term_enrichment add constraint term_enrichment_pk primary key (term_id, enriched_term_id);-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2025-02-27 16:21:01 Duration: 2s69ms
-
ALTER TABLE pub2.term_enrichment ADD CONSTRAINT term_enrichment_pk PRIMARY KEY (term_id, enriched_term_id);
Date: 2025-02-27 16:21:01 Duration: 0ms Database: ctdprd51 User: pub2
24 10 7.16 GiB 419.81 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_net_sc on pub2.gene_disease_reference using btree (network_score);-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2025-02-27 14:14:07 Duration: 2m25s
-
CREATE INDEX ix_gene_disease_ref_net_sc ON pub2.gene_disease_reference USING btree (network_score);
Date: 2025-02-27 14:14:07 Duration: 0ms
25 10 642.71 MiB 8.00 KiB 131.10 MiB 64.27 MiB alter table pub2.gene_disease add constraint gene_disease_pk primary key (gene_id, disease_id);-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2025-02-27 16:53:36 Duration: 8s508ms
-
ALTER TABLE pub2.gene_disease ADD CONSTRAINT gene_disease_pk PRIMARY KEY (gene_id, disease_id);
Date: 2025-02-27 16:53:36 Duration: 0ms Database: ctdprd51 User: pub2
26 10 249.33 MiB 8.00 KiB 51.69 MiB 24.93 MiB alter table pub2.chem_disease_reference add constraint chem_disease_reference_pk primary key (id);-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2025-02-27 14:16:14 Duration: 2s232ms
-
ALTER TABLE pub2.chem_disease_reference ADD CONSTRAINT chem_disease_reference_pk PRIMARY KEY (id);
Date: 2025-02-27 14:16:14 Duration: 0ms
27 10 1.07 GiB 8.00 KiB 223.50 MiB 109.10 MiB alter table pub2.phenotype_term_reference add constraint phenotype_term_reference_pk primary key (id);-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2025-02-27 14:14:18 Duration: 10s568ms
-
ALTER TABLE pub2.phenotype_term_reference ADD CONSTRAINT phenotype_term_reference_pk PRIMARY KEY (id);
Date: 2025-02-27 14:14:18 Duration: 0ms
28 10 7.16 GiB 417.48 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_src_db on pub2.gene_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2025-02-27 14:01:23 Duration: 54s277ms
-
CREATE INDEX ix_gene_disease_ref_src_db ON pub2.gene_disease_reference USING btree (source_acc_db_id);
Date: 2025-02-27 14:01:23 Duration: 0ms
29 10 7.16 GiB 419.81 MiB 1.00 GiB 733.39 MiB create index ix_gene_disease_ref_chem on pub2.gene_disease_reference using btree (via_chem_id);-
CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2025-02-27 14:04:02 Duration: 1m33s
-
CREATE INDEX ix_gene_disease_ref_chem ON pub2.gene_disease_reference USING btree (via_chem_id);
Date: 2025-02-27 14:04:01 Duration: 0ms
30 9 8.24 GiB 240.73 MiB 1.00 GiB 936.97 MiB select pub2.maint_cached_value_refresh_data_metrics ();-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-02-28 00:12:27 Duration: 35m11s
-
select pub2.maint_cached_value_refresh_data_metrics ();
Date: 2025-02-28 00:07:52 Duration: 0ms
31 8 65.29 MiB 8.00 KiB 16.55 MiB 8.16 MiB alter table pub2.chem_disease add constraint chem_disease_pk primary key (chem_id, disease_id);-
ALTER TABLE pub2.chem_disease ADD CONSTRAINT chem_disease_pk PRIMARY KEY (chem_id, disease_id);
Date: 2025-02-27 16:54:12 Duration: 0ms
32 6 5.65 GiB 662.31 MiB 1.00 GiB 963.72 MiB select distinct ptr.phenotype_id, cdr.disease_id, ( select id from pub2.object_type where cd = ?), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.object_type where cd = ?), cdr.mod_tm from pub2.chem_disease_reference cdr, pub2.phenotype_term_reference ptr where cdr.chem_id = ptr.term_id;-
SELECT DISTINCT ptr.phenotype_id, cdr.disease_id, ( select id from pub2.OBJECT_TYPE where cd = 'disease'), cdr.reference_id, ptr.reference_id, cdr.ixn_id, cdr.chem_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), cdr.mod_tm FROM pub2.CHEM_DISEASE_REFERENCE cdr, pub2.PHENOTYPE_TERM_REFERENCE ptr WHERE cdr.chem_id = ptr.term_id;
Date: 2025-02-27 13:46:49 Duration: 0ms
33 6 7.53 MiB 320.00 KiB 2.48 MiB 1.26 MiB vacuum full analyze log_query;-
VACUUM FULL ANALYZE log_query;
Date: 2025-02-27 00:25:15 Duration: 0ms
34 5 225.47 MiB 43.42 MiB 46.65 MiB 45.09 MiB create index ix_term_enrich_corr_p_val on pub2.term_enrichment using btree (corrected_p_val);-
CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2025-02-27 16:21:10 Duration: 4s772ms
-
CREATE INDEX ix_term_enrich_corr_p_val ON pub2.term_enrichment USING btree (corrected_p_val);
Date: 2025-02-27 16:21:10 Duration: 0ms
35 5 161.49 MiB 29.99 MiB 32.94 MiB 32.30 MiB create index ix_term_enrich_tgt_match on pub2.term_enrichment using btree (target_match_qty);-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2025-02-27 16:21:04 Duration: 1s878ms
-
CREATE INDEX ix_term_enrich_tgt_match ON pub2.term_enrichment USING btree (target_match_qty);
Date: 2025-02-27 16:21:04 Duration: 0ms
36 5 1.07 GiB 211.30 MiB 226.52 MiB 218.19 MiB create index ix_phenotype_term_ref_term_id on pub2.phenotype_term_reference using btree (term_id);-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2025-02-27 14:14:38 Duration: 10s41ms
-
CREATE INDEX ix_phenotype_term_ref_term_id ON pub2.phenotype_term_reference USING btree (term_id);
Date: 2025-02-27 14:14:38 Duration: 0ms
37 5 83.16 MiB 16.36 MiB 16.91 MiB 16.63 MiB create index ix_dag_node_nm_search on term (upper(nm);-
CREATE INDEX ix_dag_node_nm_search ON term (UPPER(nm);
Date: 2025-02-26 10:37:13 Duration: 0ms Database: ctdprd51 User: pub2 Application: psql
38 5 1.50 GiB 292.16 MiB 313.18 MiB 306.19 MiB create index ix_phenotype_term_ref_ids on pub2.phenotype_term_reference using btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2025-02-27 14:16:11 Duration: 15s597ms
-
CREATE INDEX ix_phenotype_term_ref_ids ON pub2.phenotype_term_reference USING btree (phenotype_id, term_id, via_term_object_type_id, term_object_type_id);
Date: 2025-02-27 14:16:11 Duration: 0ms
39 5 1.07 GiB 210.77 MiB 227.41 MiB 218.19 MiB create index ix_phenotype_term_ref_object_type_id on pub2.phenotype_term_reference using btree (term_object_type_id);-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2025-02-27 14:14:47 Duration: 8s833ms
-
CREATE INDEX ix_phenotype_term_ref_object_type_id ON pub2.phenotype_term_reference USING btree (term_object_type_id);
Date: 2025-02-27 14:14:47 Duration: 0ms
40 5 1.07 GiB 203.30 MiB 234.44 MiB 218.19 MiB create index ix_phenotype_term_ref_via_term_id on pub2.phenotype_term_reference using btree (via_term_id);-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2025-02-27 14:15:56 Duration: 11s443ms
-
CREATE INDEX ix_phenotype_term_ref_via_term_id ON pub2.phenotype_term_reference USING btree (via_term_id);
Date: 2025-02-27 14:15:56 Duration: 0ms
41 5 40.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_gene_disease_exp_ref_qty on pub2.gene_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_gene_disease_exp_ref_qty ON pub2.gene_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2025-02-27 16:54:08 Duration: 0ms
42 5 1.07 GiB 215.12 MiB 223.05 MiB 218.19 MiB create index ix_phenotype_term_reference_ixn_id on pub2.phenotype_term_reference using btree (ixn_id);-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2025-02-27 14:15:44 Duration: 10s922ms
-
CREATE INDEX ix_phenotype_term_reference_ixn_id ON pub2.phenotype_term_reference USING btree (ixn_id);
Date: 2025-02-27 14:15:44 Duration: 0ms
43 5 1.07 GiB 210.36 MiB 223.47 MiB 218.19 MiB create index ix_phenotype_term_reference_term_reference_id on pub2.phenotype_term_reference using btree (term_reference_id);-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2025-02-27 14:15:33 Duration: 11s319ms
-
CREATE INDEX ix_phenotype_term_reference_term_reference_id ON pub2.phenotype_term_reference USING btree (term_reference_id);
Date: 2025-02-27 14:15:33 Duration: 0ms
44 5 249.29 MiB 46.23 MiB 52.41 MiB 49.86 MiB create index ix_chem_disease_ref_src_db on pub2.chem_disease_reference using btree (source_acc_db_id);-
CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2025-02-27 14:16:29 Duration: 1s900ms
-
CREATE INDEX ix_chem_disease_ref_src_db ON pub2.chem_disease_reference USING btree (source_acc_db_id);
Date: 2025-02-27 14:16:29 Duration: 0ms
45 5 64.88 MiB 12.21 MiB 13.20 MiB 12.98 MiB create index ix_phenotype_term_term_id on pub2.phenotype_term using btree (term_id);-
CREATE INDEX ix_phenotype_term_term_id ON pub2.phenotype_term USING btree (term_id);
Date: 2025-02-27 16:54:10 Duration: 0ms
46 5 249.28 MiB 47.91 MiB 51.59 MiB 49.86 MiB create index ix_chem_disease_ref_mod_tm on pub2.chem_disease_reference using btree (mod_tm);-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2025-02-27 14:16:37 Duration: 2s734ms
-
CREATE INDEX ix_chem_disease_ref_mod_tm ON pub2.chem_disease_reference USING btree (mod_tm);
Date: 2025-02-27 14:16:37 Duration: 0ms
47 5 161.50 MiB 29.62 MiB 34.54 MiB 32.30 MiB create index ix_term_enrich_enr_obj_type on pub2.term_enrichment using btree (enriched_object_type_id);-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2025-02-27 16:21:05 Duration: 1s120ms
-
CREATE INDEX ix_term_enrich_enr_obj_type ON pub2.term_enrichment USING btree (enriched_object_type_id);
Date: 2025-02-27 16:21:05 Duration: 0ms
48 5 1.07 GiB 216.30 MiB 220.51 MiB 218.19 MiB create index ix_phenotype_term_ref_taxon_id on pub2.phenotype_term_reference using btree (taxon_id);-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2025-02-27 14:15:05 Duration: 7s443ms
-
CREATE INDEX ix_phenotype_term_ref_taxon_id ON pub2.phenotype_term_reference USING btree (taxon_id);
Date: 2025-02-27 14:15:05 Duration: 0ms
49 5 249.29 MiB 49.57 MiB 50.12 MiB 49.86 MiB create index ix_chem_disease_ref_net_sc on pub2.chem_disease_reference using btree (network_score);-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2025-02-27 14:16:42 Duration: 4s950ms
-
CREATE INDEX ix_chem_disease_ref_net_sc ON pub2.chem_disease_reference USING btree (network_score);
Date: 2025-02-27 14:16:42 Duration: 0ms
50 5 225.46 MiB 43.13 MiB 46.36 MiB 45.09 MiB create index ix_term_enrich_raw_p_val on pub2.term_enrichment using btree (raw_p_val);-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2025-02-27 16:21:15 Duration: 5s44ms
-
CREATE INDEX ix_term_enrich_raw_p_val ON pub2.term_enrichment USING btree (raw_p_val);
Date: 2025-02-27 16:21:15 Duration: 0ms
51 5 249.29 MiB 49.33 MiB 50.35 MiB 49.86 MiB create index ix_chem_disease_reference_dis on pub2.chem_disease_reference using btree (disease_id);-
CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2025-02-27 14:16:22 Duration: 2s725ms
-
CREATE INDEX ix_chem_disease_reference_dis ON pub2.chem_disease_reference USING btree (disease_id);
Date: 2025-02-27 14:16:22 Duration: 0ms
52 5 642.66 MiB 118.04 MiB 136.66 MiB 128.53 MiB create index ix_gene_disease_network_score on pub2.gene_disease using btree (network_score);-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2025-02-27 16:54:00 Duration: 16s206ms
-
CREATE INDEX ix_gene_disease_network_score ON pub2.gene_disease USING btree (network_score);
Date: 2025-02-27 16:53:59 Duration: 0ms
53 5 83.18 MiB 16.34 MiB 16.82 MiB 16.64 MiB create index ix_term_nm_search on term (upper(nm), object_type_id);-
CREATE INDEX ix_term_nm_search ON term (UPPER(nm), object_type_id);
Date: 2025-02-26 10:37:17 Duration: 2s906ms
-
CREATE INDEX ix_term_nm_search ON term (UPPER(nm), object_type_id);
Date: 2025-02-26 10:37:17 Duration: 0ms
54 5 161.49 MiB 30.41 MiB 33.91 MiB 32.30 MiB create index ix_term_enrich_obj_type on pub2.term_enrichment using btree (object_type_id);-
CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2025-02-27 16:21:02 Duration: 1s114ms
-
CREATE INDEX ix_term_enrich_obj_type ON pub2.term_enrichment USING btree (object_type_id);
Date: 2025-02-27 16:21:02 Duration: 0ms
55 5 249.28 MiB 43.74 MiB 53.27 MiB 49.86 MiB create index ix_chem_disease_reference_ref on pub2.chem_disease_reference using btree (reference_id);-
CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2025-02-27 14:16:25 Duration: 2s789ms
-
CREATE INDEX ix_chem_disease_reference_ref ON pub2.chem_disease_reference USING btree (reference_id);
Date: 2025-02-27 14:16:25 Duration: 0ms
56 5 642.53 MiB 126.68 MiB 129.64 MiB 128.51 MiB create index ix_gene_disease_ind_chem_qty on pub2.gene_disease using btree (indirect_chem_qty) where (indirect_chem_qty > ?);-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2025-02-27 16:54:08 Duration: 7s491ms
-
CREATE INDEX ix_gene_disease_ind_chem_qty ON pub2.gene_disease USING btree (indirect_chem_qty) WHERE (indirect_chem_qty > 0);
Date: 2025-02-27 16:54:08 Duration: 0ms
57 5 1.07 GiB 211.21 MiB 222.51 MiB 218.19 MiB create index ix_phenotype_term_ref_evidence_cd on pub2.phenotype_term_reference using btree (evidence_cd);-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2025-02-27 14:15:14 Duration: 8s987ms
-
CREATE INDEX ix_phenotype_term_ref_evidence_cd ON pub2.phenotype_term_reference USING btree (evidence_cd);
Date: 2025-02-27 14:15:14 Duration: 0ms
58 5 44.04 MiB 7.61 MiB 9.57 MiB 8.81 MiB create index ix_term_upper_acc_txt on term (upper(acc_txt));-
CREATE INDEX ix_term_upper_acc_txt ON term (UPPER(acc_txt));
Date: 2025-02-26 10:37:19 Duration: 1s724ms
-
CREATE INDEX ix_term_upper_acc_txt ON term (UPPER(acc_txt));
Date: 2025-02-26 10:37:19 Duration: 0ms
59 5 249.28 MiB 49.66 MiB 50.12 MiB 49.86 MiB create index ix_chem_disease_ref_source_cd on pub2.chem_disease_reference using btree (source_cd);-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2025-02-27 14:16:27 Duration: 1s937ms
-
CREATE INDEX ix_chem_disease_ref_source_cd ON pub2.chem_disease_reference USING btree (source_cd);
Date: 2025-02-27 14:16:27 Duration: 0ms
60 5 64.88 MiB 9.45 MiB 16.34 MiB 12.97 MiB create index ix_phenotype_term_phenotype_id on pub2.phenotype_term using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_phenotype_id ON pub2.phenotype_term USING btree (phenotype_id);
Date: 2025-02-27 16:54:10 Duration: 0ms
61 5 642.66 MiB 123.65 MiB 130.88 MiB 128.53 MiB create index ix_gene_disease_disease on pub2.gene_disease using btree (disease_id);-
CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2025-02-27 16:53:43 Duration: 7s269ms
-
CREATE INDEX ix_gene_disease_disease ON pub2.gene_disease USING btree (disease_id);
Date: 2025-02-27 16:53:43 Duration: 0ms
62 5 1.07 GiB 215.51 MiB 227.41 MiB 218.19 MiB create index ix_phenotype_term_ref_reference_id on pub2.phenotype_term_reference using btree (reference_id);-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2025-02-27 14:14:58 Duration: 11s139ms
-
CREATE INDEX ix_phenotype_term_ref_reference_id ON pub2.phenotype_term_reference USING btree (reference_id);
Date: 2025-02-27 14:14:58 Duration: 0ms
63 5 1.07 GiB 215.75 MiB 220.07 MiB 218.19 MiB create index ix_phenotype_term_ref_phenotype_id on pub2.phenotype_term_reference using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2025-02-27 14:14:28 Duration: 9s725ms
-
CREATE INDEX ix_phenotype_term_ref_phenotype_id ON pub2.phenotype_term_reference USING btree (phenotype_id);
Date: 2025-02-27 14:14:28 Duration: 0ms
64 5 40.10 MiB 7.23 MiB 9.70 MiB 8.02 MiB create index ix_term_browse_index on term (regexp_replace(upper(substring(nm, ?, ?)), ?, ?), object_type_id);-
CREATE INDEX ix_term_browse_index ON term (REGEXP_REPLACE(UPPER(SUBSTRING(nm, 1, 1)), '[^A-Z]', '#'), object_type_id);
Date: 2025-02-26 10:37:14 Duration: 1s225ms
-
CREATE INDEX ix_term_browse_index ON term (REGEXP_REPLACE(UPPER(SUBSTRING(nm, 1, 1)), '[^A-Z]', '#'), object_type_id);
Date: 2025-02-26 10:37:14 Duration: 0ms
65 5 249.29 MiB 49.24 MiB 50.13 MiB 49.86 MiB create index ix_chem_disease_reference_ixn on pub2.chem_disease_reference using btree (ixn_id);-
CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2025-02-27 14:16:34 Duration: 2s776ms
-
CREATE INDEX ix_chem_disease_reference_ixn ON pub2.chem_disease_reference USING btree (ixn_id);
Date: 2025-02-27 14:16:34 Duration: 0ms
66 5 1.07 GiB 216.62 MiB 220.82 MiB 218.19 MiB create index ix_phenotype_term_reference_source_acc_db_id on pub2.phenotype_term_reference using btree (source_acc_db_id);-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2025-02-27 14:15:22 Duration: 7s741ms
-
CREATE INDEX ix_phenotype_term_reference_source_acc_db_id ON pub2.phenotype_term_reference USING btree (source_acc_db_id);
Date: 2025-02-27 14:15:22 Duration: 0ms
67 5 688.00 KiB 104.00 KiB 152.00 KiB 137.60 KiB create index ix_gene_disease_cur_ref_qty on pub2.gene_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_gene_disease_cur_ref_qty ON pub2.gene_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2025-02-27 16:54:00 Duration: 0ms
68 5 249.29 MiB 47.78 MiB 51.76 MiB 49.86 MiB create index ix_chem_disease_reference_gene on pub2.chem_disease_reference using btree (via_gene_id);-
CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2025-02-27 14:16:32 Duration: 2s813ms
-
CREATE INDEX ix_chem_disease_reference_gene ON pub2.chem_disease_reference USING btree (via_gene_id);
Date: 2025-02-27 14:16:32 Duration: 0ms
69 4 13.88 MiB 8.00 KiB 6.99 MiB 3.47 MiB alter table pub2.phenotype_term_axn add constraint phenotype_term_axn_pk primary key (phenotype_id, term_id, action_type_nm, action_degree_type_nm);-
ALTER TABLE pub2.phenotype_term_axn ADD CONSTRAINT phenotype_term_axn_pk PRIMARY KEY (phenotype_id, term_id, action_type_nm, action_degree_type_nm);
Date: 2025-02-27 16:54:11 Duration: 0ms
70 4 65.26 MiB 15.75 MiB 16.52 MiB 16.31 MiB create index ix_chem_disease_network_score on pub2.chem_disease using btree (network_score);-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2025-02-27 16:54:14 Duration: 1s536ms
-
CREATE INDEX ix_chem_disease_network_score ON pub2.chem_disease USING btree (network_score);
Date: 2025-02-27 16:54:14 Duration: 0ms
71 4 65.25 MiB 13.23 MiB 19.71 MiB 16.31 MiB create index ix_chem_disease_disease on pub2.chem_disease using btree (disease_id);-
CREATE INDEX ix_chem_disease_disease ON pub2.chem_disease USING btree (disease_id);
Date: 2025-02-27 16:54:15 Duration: 0ms
72 4 64.38 MiB 15.70 MiB 16.72 MiB 16.09 MiB create index ix_chem_disease_ind_gene_qty on pub2.chem_disease using btree (indirect_gene_qty) where (indirect_gene_qty > ?);-
CREATE INDEX ix_chem_disease_ind_gene_qty ON pub2.chem_disease USING btree (indirect_gene_qty) WHERE (indirect_gene_qty > 0);
Date: 2025-02-27 16:54:16 Duration: 0ms
73 4 2.00 MiB 336.00 KiB 768.00 KiB 512.00 KiB create index ix_chem_disease_cur_ref_qty on pub2.chem_disease using btree (curated_reference_qty) where (curated_reference_qty > ?);-
CREATE INDEX ix_chem_disease_cur_ref_qty ON pub2.chem_disease USING btree (curated_reference_qty) WHERE (curated_reference_qty > 0);
Date: 2025-02-27 16:54:15 Duration: 0ms
74 4 32.00 KiB 8.00 KiB 8.00 KiB 8.00 KiB create index ix_chem_disease_exp_ref_qty on pub2.chem_disease using btree (exposure_reference_qty) where (exposure_reference_qty > ?);-
CREATE INDEX ix_chem_disease_exp_ref_qty ON pub2.chem_disease USING btree (exposure_reference_qty) WHERE (exposure_reference_qty > 0);
Date: 2025-02-27 16:54:16 Duration: 0ms
75 2 6.29 MiB 2.88 MiB 3.41 MiB 3.14 MiB create index ix_phenotype_term_axn_term_id on pub2.phenotype_term_axn using btree (term_id);-
CREATE INDEX ix_phenotype_term_axn_term_id ON pub2.phenotype_term_axn USING btree (term_id);
Date: 2025-02-27 16:54:12 Duration: 0ms
76 2 6.29 MiB 2.72 MiB 3.57 MiB 3.14 MiB create index ix_phenotype_term_axn_phenotype_id on pub2.phenotype_term_axn using btree (phenotype_id);-
CREATE INDEX ix_phenotype_term_axn_phenotype_id ON pub2.phenotype_term_axn USING btree (phenotype_id);
Date: 2025-02-27 16:54:12 Duration: 0ms
77 1 26.27 GiB 26.27 GiB 26.27 GiB 26.27 GiB select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);-
select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');
Date: 2025-02-27 12:11:00 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 26.27 GiB select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = 'does not affect');[ Date: 2025-02-27 12:11:00 ]
2 1.00 GiB SELECT * FROM pgbulkload.pg_bulkload ($1);[ Date: 2025-02-26 16:02:05 - Database: ctdprd51 - User: load - Application: pg_bulkload ]
3 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
4 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
5 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
6 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
7 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
8 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
9 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
10 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
11 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
12 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
13 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
14 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
15 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:45 ]
16 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:46 ]
17 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:46 ]
18 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:46 ]
19 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:46 ]
20 1.00 GiB select distinct ptr.phenotype_id, gcr.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ptr.term_id, ( select id from pub2.OBJECT_TYPE where cd = 'chem'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.PHENOTYPE_TERM_REFERENCE ptr2 where gcr.chem_id = ptr.term_id and ptr.phenotype_id = ptr2.phenotype_id and gcr.gene_id = ptr2.term_id and gcr.id not in;[ Date: 2025-02-27 12:56:46 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 216.98 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2025-02-27 17:35:03 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 216.98 sec Highest CPU-cost vacuum
Table pub2.gene_disease
Database ctdprd51 - 2025-02-27 17:35:03 Date
Analyzes per table
Key values
- pubc.log_query (198) Main table analyzed (database ctdprd51)
- 318 analyzes Total
Table Number of analyzes ctdprd51.pubc.log_query 198 ctdprd51.pg_catalog.pg_class 8 ctdprd51.pg_catalog.pg_attribute 5 ctdprd51.pub2.term 4 ctdprd51.pg_catalog.pg_shdepend 3 ctdprd51.pg_catalog.pg_type 3 ctdprd51.pub2.reference 3 ctdprd51.pg_catalog.pg_depend 3 ctdprd51.pg_catalog.pg_index 3 ctdprd51.pg_catalog.pg_constraint 2 ctdprd51.pg_catalog.pg_description 2 ctdprd51.pub2.term_set_enrichment_agent 2 ctdprd51.pg_catalog.pg_attrdef 2 ctdprd51.pg_catalog.pg_trigger 2 ctdprd51.pub1.term_set_enrichment_agent 2 ctdprd51.pub1.term_set_enrichment 2 postgres.pg_catalog.pg_shdepend 2 ctdprd51.pub2.dag_node 2 ctdprd51.pub2.phenotype_term 2 ctdprd51.pub2.db 2 ctdprd51.pub2.term_set_enrichment 2 ctdprd51.edit.slim_term 1 ctdprd51.pub2.exp_stressor_stressor_src 1 ctdprd51.pub2.gene_disease 1 ctdprd51.edit.db 1 ctdprd51.pub2.exp_event_location 1 ctdprd51.edit.action_type_path 1 ctdprd51.pub2.gene_gene_ref_throughput 1 ctdprd51.edit.evidence 1 ctdprd51.pub2.exp_event 1 ctdprd51.pub2.db_report_site 1 ctdprd51.pub2.exp_event_project 1 ctdprd51.edit.list_db_report 1 ctdprd51.pub2.exp_anatomy 1 ctdprd51.pub2.exp_study_factor 1 ctdprd51.pub2.exp_receptor_race 1 ctdprd51.pub2.img 1 ctdprd51.pubc.log_query_bots 1 ctdprd51.edit.action_degree_type 1 ctdprd51.edit.db_link 1 ctdprd51.pub2.gene_go_annot 1 ctdprd51.pub2.exp_outcome 1 ctdprd51.pub2.gene_taxon 1 ctdprd51.edit.object_note 1 ctdprd51.pub2.gene_gene_reference 1 ctdprd51.pub2.term_comp_agent 1 ctdprd51.pub2.reference_party_role 1 ctdprd51.edit.db_report_site 1 ctdprd51.edit.exp_marker_type 1 ctdprd51.edit.geographic_region 1 ctdprd51.edit.action_degree 1 ctdprd51.edit.country 1 ctdprd51.edit.reference_db_link 1 ctdprd51.pub2.geographic_region 1 ctdprd51.pub2.reference_party 1 ctdprd51.pub2.action_type 1 ctdprd51.pub2.exposure 1 ctdprd51.pub2.country 1 ctdprd51.pub2.db_report 1 ctdprd51.pub2.term_pathway 1 ctdprd51.pub2.term_label 1 ctdprd51.pub2.gene_gene 1 ctdprd51.load.data_load 1 ctdprd51.pub2.reference_exp 1 ctdprd51.edit.action_type 1 ctdprd51.pg_catalog.pg_proc 1 ctdprd51.edit.exp_outcome_ixn_type 1 ctdprd51.pub2.dag_edge 1 ctdprd51.edit.term_label_type 1 ctdprd51.pub2.slim_term_mapping 1 ctdprd51.pub2.chem_disease 1 ctdprd51.pub2.gene_chem_ref_gene_form 1 ctdprd51.pub2.term_reference 1 ctdprd51.pub2.medium 1 ctdprd51.edit.actor_form_type 1 ctdprd51.pub2.exp_stressor 1 ctdprd51.pub2.exp_receptor 1 ctdprd51.pub2.term_comp 1 ctdprd51.pub2.list_db_report 1 ctdprd51.pub2.ixn 1 ctdprd51.pub2.db_link 1 ctdprd51.edit.db_report 1 ctdprd51.pub2.exp_event_assay_method 1 ctdprd51.pub2.exp_receptor_tobacco_use 1 ctdprd51.pub2.exp_receptor_gender 1 Total 318 Vacuums per table
Key values
- pg_catalog.pg_statistic (918) Main table vacuumed on database ctdprd51
- 10,531 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pg_catalog.pg_statistic 918 4 564,369 0 713 0 107,233 1,757 593 2,071,505 ctdprd51.pg_catalog.pg_class 573 3 126,174 0 199 0 0 577 152 520,675 ctdprd51.pg_catalog.pg_attribute 573 3 329,919 0 413 0 21,228 970 348 1,567,344 ctdprd51.pg_catalog.pg_constraint 572 2 119,104 0 116 0 0 232 87 300,861 ctdprd51.pg_catalog.pg_shdepend 572 2 60,770 0 86 0 0 179 73 273,068 ctdprd51.pg_catalog.pg_trigger 572 2 100,337 0 141 0 0 272 102 343,689 ctdprd51.pg_catalog.pg_index 572 2 61,269 0 74 0 0 174 56 195,168 postgres.pg_catalog.pg_shdepend 571 0 70,170 0 4 0 0 5 1 8,765 ctdprd51.pg_catalog.pg_depend 568 2 134,211 0 248 0 36,920 536 209 761,425 ctdprd51.pg_catalog.pg_type 567 2 47,741 0 44 0 0 104 37 158,823 ctdprd51.pg_catalog.pg_attrdef 567 1 39,751 0 13 0 0 24 9 43,647 ctdprd51.pubc.log_query 555 38 2,878,985 0 18,734 0 6,798 28,664 5,081 18,927,603 ctdprd51.pg_toast.pg_toast_2619 463 8 1,175,060 0 8,525 0 4,852,618 20,131 5,809 3,159,394 ctdprd51.edit.list_db_report 402 1 22,526 0 12 0 0 12 7 31,392 ctdprd51.edit.db 402 2 38,233 0 20 0 0 37 23 112,716 ctdprd51.edit.action_type_path 402 1 20,512 0 9 0 0 8 4 17,278 ctdprd51.edit.action_degree 402 2 19,312 0 14 0 0 22 13 77,406 ctdprd51.edit.country 402 2 26,577 0 20 0 0 21 14 61,865 ctdprd51.edit.db_report_site 402 1 24,939 0 15 0 0 17 10 44,926 ctdprd51.edit.db_report 402 1 43,043 0 15 0 0 15 10 43,949 ctdprd51.pub2.term 8 2 2,186,808 0 416,105 0 69 861,478 471,519 1,922,162,956 ctdprd51.pub2.reference 5 2 975,308 0 133,337 2 0 439,023 123,813 375,040,986 ctdprd51.pub2.dag_node 4 1 735,657 0 92,916 0 0 316,148 146,629 454,052,499 ctdprd51.pg_toast.pg_toast_486223 3 0 93 0 3 0 0 3 0 564 ctdprd51.pub2.chem_disease 2 1 370,489 0 59,404 0 0 165,029 59,418 198,909,047 ctdprd51.pub2.phenotype_term 2 2 972,548 0 7,527 0 0 779,959 66,957 225,434,981 ctdprd51.edit.db_link 1 0 7,478 0 2 0 0 1 0 257 ctdprd51.pub2.gene_go_annot 1 0 570,704 0 263,986 0 0 285,239 10 16,906,368 ctdprd51.pub2.exp_outcome 1 0 745 0 3 0 0 315 1 27,004 ctdprd51.pub2.term_set_enrichment_agent 1 0 11,264 0 2 0 0 1 0 281 ctdprd51.pub2.exp_study_factor 1 0 79 0 15 0 0 11 2 12,068 ctdprd51.pub2.exp_receptor_race 1 0 1,358 0 3 0 0 644 1 46,415 ctdprd51.pub2.img 1 0 1,108 0 5 0 0 524 2 42,607 ctdprd51.pubc.log_query_bots 1 0 45,027 0 19,680 0 20,706 20,172 3 1,212,604 ctdprd51.pg_catalog.pg_description 1 1 199 0 31 0 42 76 22 83,044 ctdprd51.pub2.exp_event 1 0 12,848 0 3 0 0 6,344 1 382,715 ctdprd51.pub2.exp_event_project 1 0 2,126 0 3 0 0 1,041 1 69,838 ctdprd51.pub2.exp_anatomy 1 0 161 0 4 0 0 35 2 12,848 ctdprd51.pub2.exp_stressor_stressor_src 1 0 2,751 0 4 0 0 1,346 1 87,833 ctdprd51.pub2.gene_disease 1 1 2,935,649 0 627,729 0 0 1,625,262 542,784 2,033,137,816 ctdprd51.pub2.exp_event_location 1 0 3,564 0 3 0 0 1,731 1 110,548 ctdprd51.pub2.gene_gene_ref_throughput 1 0 14,779 0 4 0 0 7,350 2 445,341 ctdprd51.edit.ixn_action 1 1 46,371 0 14,072 0 0 23,502 11,960 67,927,926 ctdprd51.pub1.term_set_enrichment 1 0 10,100 0 4,032 0 0 4,030 1 246,189 ctdprd51.pub2.exposure 1 0 3,806 0 3 0 0 1,849 1 117,510 ctdprd51.edit.reference_db_link 1 0 7,297 0 3 0 0 1 0 188 ctdprd51.pub2.reference_party 1 0 5,111 0 4 0 0 2,522 2 160,133 ctdprd51.pub1.term_set_enrichment_agent 1 0 464,948 0 192,128 0 0 232,378 8 13,776,100 ctdprd51.pub2.term_comp_agent 1 0 144 0 3 0 0 36 1 10,543 ctdprd51.pub2.gene_gene_reference 1 0 30,796 0 3 0 0 15,321 1 912,358 ctdprd51.pub2.reference_party_role 1 0 13,466 0 4 0 0 6,706 1 404,073 ctdprd51.edit.geographic_region 1 1 73 0 6 0 0 5 3 4,047 ctdprd51.pg_toast.pg_toast_7511685 1 1 91 0 3 0 0 48 2 11,527 ctdprd51.pub2.gene_taxon 1 0 150,760 0 5 0 0 75,322 3 4,468,811 ctdprd51.pub2.slim_term_mapping 1 0 600 0 4 0 0 262 2 26,793 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 33,524 0 3 0 0 16,712 2 997,699 ctdprd51.pub2.term_reference 1 0 37,930 0 5 0 0 18,910 2 1,126,201 ctdprd51.pg_toast.pg_toast_7511754 1 0 88,495 0 4 0 0 44,240 2 2,626,683 ctdprd51.edit.action_type 1 0 93 0 2 0 0 1 1 2,099 ctdprd51.pub2.dag_edge 1 0 1,053 0 5 0 0 482 2 39,221 ctdprd51.pub2.term_pathway 1 0 3,332 0 4 0 0 1,614 2 105,737 ctdprd51.pub2.term_label 1 0 185,763 0 6 0 0 92,831 4 5,503,934 ctdprd51.pub2.gene_gene 1 0 12,192 0 5 0 0 6,044 2 368,287 ctdprd51.pub2.reference_exp 1 0 332 0 3 0 0 129 1 16,030 ctdprd51.edit.receptor 1 0 43 0 3 0 0 1 0 214 ctdprd51.edit.race 1 0 56 0 3 0 0 1 1 3,103 ctdprd51.pub2.db_link 1 0 251,256 0 88,648 0 0 125,482 5 7,438,812 ctdprd51.pub2.ixn 1 1 1,516,420 0 25,250 0 0 1,007,591 19 69,259,342 ctdprd51.pub2.exp_event_assay_method 1 0 5,025 0 3 0 0 2,484 1 154,975 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 1,225 0 3 0 0 577 1 42,462 ctdprd51.pub2.exp_receptor_gender 1 0 2,782 0 3 0 0 1,376 1 89,603 ctdprd51.pub2.term_set_enrichment 1 0 572 0 2 0 0 1 0 281 ctdprd51.pub2.exp_receptor 1 0 7,523 0 4 0 0 3,733 2 231,582 ctdprd51.pub2.db 1 1 149 0 3 0 0 17 1 11,342 ctdprd51.pub2.exp_stressor 1 0 6,419 0 3 0 0 3,180 1 196,039 ctdprd51.edit.age_uom 1 0 61 0 3 0 0 1 1 1,091 Total 10,531 94 17,641,553 233,066 1,974,419 2 5,045,614 6,252,878 1,435,843 5,433,181,054 Tuples removed per table
Key values
- pub2.gene_disease (33627307) Main table with removed tuples on database ctdprd51
- 61641423 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pub2.gene_disease 1 1 33,627,307 33,627,307 0 0 494,520 ctdprd51.pub2.phenotype_term 2 2 20,386,056 6,788,018 0 0 253,964 ctdprd51.pub2.chem_disease 2 1 3,413,857 10,241,571 3,413,857 0 100,308 ctdprd51.pub2.term 8 2 2,112,209 23,241,304 8,448,836 0 766,248 ctdprd51.pub2.dag_node 4 1 1,728,686 10,342,392 3,457,372 0 290,209 ctdprd51.pub2.reference 5 2 202,740 1,401,156 405,475 0 357,845 ctdprd51.pubc.log_query 555 38 65,803 39,115,000 32,017,817 0 1,425,603 ctdprd51.pub2.ixn 1 1 52,852 2,349,018 0 0 556,082 ctdprd51.pg_toast.pg_toast_2619 463 8 23,440 5,965,341 1,682,098 0 5,830,096 ctdprd51.edit.ixn_action 1 1 6,219 3,644,268 0 0 39,435 ctdprd51.pg_catalog.pg_attribute 573 3 5,654 7,377,481 2,521,936 0 143,518 ctdprd51.pg_catalog.pg_depend 568 2 5,509 9,572,777 2,872,588 0 87,445 ctdprd51.pg_catalog.pg_statistic 918 4 3,309 3,332,788 1,198,787 8 383,716 ctdprd51.pg_catalog.pg_shdepend 572 2 1,671 2,018,286 827,950 0 15,410 ctdprd51.pg_catalog.pg_trigger 572 2 1,506 1,860,420 823,344 0 38,246 ctdprd51.pg_catalog.pg_index 572 2 844 1,109,303 440,054 0 27,402 ctdprd51.pg_catalog.pg_constraint 572 2 659 832,672 327,009 0 27,417 ctdprd51.pg_catalog.pg_description 1 1 619 5,948 635 0 90 ctdprd51.pg_catalog.pg_type 567 2 414 879,545 223,526 0 20,979 ctdprd51.pg_catalog.pg_class 573 3 340 2,187,260 1,155,844 0 55,075 ctdprd51.edit.country 402 2 249 199,947 99,849 0 1,608 ctdprd51.edit.action_degree 402 2 230 175,857 87,819 0 2,412 ctdprd51.edit.list_db_report 402 1 183 146,949 73,383 0 1,206 ctdprd51.edit.db_report_site 402 1 160 128,480 64,160 0 2,010 ctdprd51.edit.db_report 402 1 158 126,874 63,358 0 1,608 ctdprd51.edit.db 402 2 153 104,390 52,130 0 3,216 ctdprd51.pub2.db 1 1 130 130 0 0 6 ctdprd51.pg_catalog.pg_attrdef 567 1 125 203,851 70,606 0 6,237 ctdprd51.edit.action_type_path 402 1 106 85,118 42,506 0 804 ctdprd51.pg_toast.pg_toast_7511685 1 1 59 70 0 0 21 ctdprd51.edit.race 1 0 54 54 27 0 1 ctdprd51.edit.receptor 1 0 48 32 16 0 1 ctdprd51.edit.age_uom 1 0 45 18 9 0 1 ctdprd51.edit.geographic_region 1 1 17 102 51 0 1 ctdprd51.edit.action_type 1 0 12 120 60 0 3 ctdprd51.edit.db_link 1 0 0 326,994 0 0 3,643 ctdprd51.pub2.gene_go_annot 1 0 0 44,784,330 0 0 285,238 ctdprd51.pub2.exp_outcome 1 0 0 28,051 0 0 314 ctdprd51.pub2.term_set_enrichment_agent 1 0 0 494,031 0 0 5,614 ctdprd51.pub2.exp_study_factor 1 0 0 1,668 0 0 10 ctdprd51.pub2.exp_receptor_race 1 0 0 99,073 0 0 643 ctdprd51.pub2.img 1 0 0 50,689 0 0 523 ctdprd51.pubc.log_query_bots 1 0 0 2,623,429 0 0 95,346 ctdprd51.pub2.exp_event 1 0 0 215,582 0 0 6,343 ctdprd51.pub2.exp_event_project 1 0 0 100,628 0 0 1,040 ctdprd51.pub2.exp_anatomy 1 0 0 3,983 0 0 34 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 303,877 0 0 1,345 ctdprd51.pub2.exp_event_location 1 0 0 260,665 0 0 1,730 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 1,413,599 0 0 7,349 ctdprd51.pub1.term_set_enrichment 1 0 0 1,567,034 0 0 25,930 ctdprd51.pub2.exposure 1 0 0 224,304 0 0 1,848 postgres.pg_catalog.pg_shdepend 571 0 0 2,016,727 828,331 0 15,383 ctdprd51.edit.reference_db_link 1 0 0 326,994 0 0 3,643 ctdprd51.pub2.reference_party 1 0 0 451,240 0 0 2,521 ctdprd51.pg_toast.pg_toast_486223 3 0 0 30 0 0 7 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 106,126,434 0 0 1,205,983 ctdprd51.pub2.term_comp_agent 1 0 0 4,563 0 0 44 ctdprd51.pub2.gene_gene_reference 1 0 0 1,406,045 0 0 15,320 ctdprd51.pub2.reference_party_role 1 0 0 1,240,317 0 0 6,705 ctdprd51.pub2.gene_taxon 1 0 0 11,825,374 0 0 75,321 ctdprd51.pub2.slim_term_mapping 1 0 0 32,829 0 0 261 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 3,084,485 0 0 16,711 ctdprd51.pub2.term_reference 1 0 0 3,498,145 0 0 18,909 ctdprd51.pg_toast.pg_toast_7511754 1 0 0 239,199 0 0 44,239 ctdprd51.pub2.dag_edge 1 0 0 88,931 0 0 481 ctdprd51.pub2.term_pathway 1 0 0 135,792 0 0 1,613 ctdprd51.pub2.term_label 1 0 0 6,319,802 0 0 92,830 ctdprd51.pub2.gene_gene 1 0 0 1,117,942 0 0 6,043 ctdprd51.pub2.reference_exp 1 0 0 3,539 0 0 128 ctdprd51.pub2.db_link 1 0 0 17,371,822 0 0 125,481 ctdprd51.pub2.exp_event_assay_method 1 0 0 247,568 0 0 2,483 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 81,541 0 0 576 ctdprd51.pub2.exp_receptor_gender 1 0 0 197,103 0 0 1,375 ctdprd51.pub2.term_set_enrichment 1 0 0 14,753 0 0 245 ctdprd51.pub2.exp_receptor 1 0 0 198,356 0 0 3,732 ctdprd51.pub2.exp_stressor 1 0 0 217,652 0 0 3,179 Total 10,531 94 61,641,423 375,808,967 61,199,433 8 13,012,906 Pages removed per table
Key values
- pg_catalog.pg_statistic (8) Main table with removed pages on database ctdprd51
- 8 pages Total removed
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pg_catalog.pg_statistic 918 4 3309 8 ctdprd51.edit.db_link 1 0 0 0 ctdprd51.pub2.gene_go_annot 1 0 0 0 ctdprd51.pub2.exp_outcome 1 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 1 0 0 0 ctdprd51.pub2.exp_study_factor 1 0 0 0 ctdprd51.pub2.exp_receptor_race 1 0 0 0 ctdprd51.pub2.img 1 0 0 0 ctdprd51.pubc.log_query_bots 1 0 0 0 ctdprd51.pg_catalog.pg_description 1 1 619 0 ctdprd51.pub2.exp_event 1 0 0 0 ctdprd51.pub2.term 8 2 2112209 0 ctdprd51.pub2.exp_event_project 1 0 0 0 ctdprd51.edit.list_db_report 402 1 183 0 ctdprd51.pub2.exp_anatomy 1 0 0 0 ctdprd51.pub2.exp_stressor_stressor_src 1 0 0 0 ctdprd51.pub2.gene_disease 1 1 33627307 0 ctdprd51.pub2.exp_event_location 1 0 0 0 ctdprd51.pg_catalog.pg_constraint 572 2 659 0 ctdprd51.edit.db 402 2 153 0 ctdprd51.edit.action_type_path 402 1 106 0 ctdprd51.pub2.gene_gene_ref_throughput 1 0 0 0 ctdprd51.edit.ixn_action 1 1 6219 0 ctdprd51.pub1.term_set_enrichment 1 0 0 0 ctdprd51.pub2.exposure 1 0 0 0 postgres.pg_catalog.pg_shdepend 571 0 0 0 ctdprd51.edit.action_degree 402 2 230 0 ctdprd51.edit.country 402 2 249 0 ctdprd51.edit.reference_db_link 1 0 0 0 ctdprd51.pub2.reference_party 1 0 0 0 ctdprd51.pg_toast.pg_toast_486223 3 0 0 0 ctdprd51.pg_catalog.pg_shdepend 572 2 1671 0 ctdprd51.pg_catalog.pg_type 567 2 414 0 ctdprd51.pub1.term_set_enrichment_agent 1 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pub2.gene_gene_reference 1 0 0 0 ctdprd51.edit.db_report_site 402 1 160 0 ctdprd51.pub2.reference_party_role 1 0 0 0 ctdprd51.edit.geographic_region 1 1 17 0 ctdprd51.pg_toast.pg_toast_7511685 1 1 59 0 ctdprd51.pg_catalog.pg_attrdef 567 1 125 0 ctdprd51.pub2.gene_taxon 1 0 0 0 ctdprd51.pg_catalog.pg_trigger 572 2 1506 0 ctdprd51.pg_catalog.pg_index 572 2 844 0 ctdprd51.pub2.slim_term_mapping 1 0 0 0 ctdprd51.pub2.chem_disease 2 1 3413857 0 ctdprd51.pub2.dag_node 4 1 1728686 0 ctdprd51.pub2.gene_chem_ref_gene_form 1 0 0 0 ctdprd51.pub2.term_reference 1 0 0 0 ctdprd51.pg_toast.pg_toast_7511754 1 0 0 0 ctdprd51.edit.action_type 1 0 12 0 ctdprd51.pub2.dag_edge 1 0 0 0 ctdprd51.pub2.term_pathway 1 0 0 0 ctdprd51.pub2.term_label 1 0 0 0 ctdprd51.pub2.gene_gene 1 0 0 0 ctdprd51.pg_catalog.pg_depend 568 2 5509 0 ctdprd51.pub2.reference_exp 1 0 0 0 ctdprd51.edit.receptor 1 0 48 0 ctdprd51.pub2.reference 5 2 202740 0 ctdprd51.pubc.log_query 555 38 65803 0 ctdprd51.edit.race 1 0 54 0 ctdprd51.pub2.db_link 1 0 0 0 ctdprd51.pub2.ixn 1 1 52852 0 ctdprd51.edit.db_report 402 1 158 0 ctdprd51.pub2.exp_event_assay_method 1 0 0 0 ctdprd51.pub2.exp_receptor_tobacco_use 1 0 0 0 ctdprd51.pub2.exp_receptor_gender 1 0 0 0 ctdprd51.pub2.term_set_enrichment 1 0 0 0 ctdprd51.pub2.exp_receptor 1 0 0 0 ctdprd51.pub2.db 1 1 130 0 ctdprd51.pg_catalog.pg_class 573 3 340 0 ctdprd51.pub2.exp_stressor 1 0 0 0 ctdprd51.pub2.phenotype_term 2 2 20386056 0 ctdprd51.pg_catalog.pg_attribute 573 3 5654 0 ctdprd51.edit.age_uom 1 0 45 0 ctdprd51.pg_toast.pg_toast_2619 463 8 23440 0 Total 10,531 94 61,641,423 8 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Feb 23 00 6 3 01 2 3 02 2 3 03 2 3 04 0 2 05 2 2 06 2 1 07 2 1 08 0 1 09 2 1 10 0 1 11 0 1 12 2 0 13 0 1 14 0 0 15 0 1 16 0 0 17 0 0 18 2 0 19 0 0 20 0 1 21 0 0 22 0 0 23 0 0 Feb 24 00 2 4 01 2 3 02 0 3 03 2 2 04 0 2 05 0 2 06 2 1 07 0 1 08 0 1 09 2 1 10 0 2 11 0 1 12 4 1 13 0 2 14 2 1 15 0 1 16 2 1 17 0 1 18 0 1 19 2 1 20 0 0 21 2 2 22 0 1 23 2 0 Feb 25 00 2 5 01 2 4 02 4 3 03 2 3 04 2 1 05 2 2 06 0 1 07 2 1 08 0 2 09 0 1 10 2 0 11 0 1 12 2 2 13 2 2 14 0 0 15 0 1 16 0 0 17 0 1 18 2 0 19 0 1 20 0 0 21 0 0 22 0 1 23 2 0 Feb 26 00 2 3 01 2 3 02 2 1 03 0 0 04 0 0 05 0 2 06 2 2 07 0 2 08 2 2 09 2 1 10 484 26 11 1,318 1 12 1,378 3 13 1,882 21 14 2,280 1 15 2,278 0 16 2,280 1 17 2,280 1 18 2,280 0 19 2,246 1 20 416 0 21 0 0 22 0 1 23 0 0 Feb 27 00 70 2 01 120 4 02 132 3 03 236 3 04 236 1 05 240 2 06 240 1 07 240 1 08 160 1 09 0 2 10 30 20 11 0 2 12 2 0 13 2 1 14 0 1 15 2 0 16 34 21 17 38 10 18 0 1 19 4 2 20 4 1 21 6 6 22 0 0 23 6 4 Feb 28 00 2 4 01 2 4 02 2 3 03 2 2 04 2 2 05 0 1 06 2 2 07 0 1 08 2 1 09 0 1 10 6 4 11 0 3 12 2 0 13 0 1 14 0 1 15 0 0 16 2 1 17 0 1 18 0 0 19 0 1 20 0 0 21 2 1 22 0 0 23 0 0 Mar 01 00 8 4 01 2 4 02 2 3 03 1 2 04 0 2 05 1 2 06 0 1 07 1 1 08 0 1 09 0 1 10 1 1 11 0 0 12 0 1 13 2 4 14 0 0 15 0 1 16 0 0 17 0 1 18 1 0 19 0 0 20 0 1 21 0 0 22 0 1 23 0 0 - 216.98 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- AccessExclusiveLock Main Lock Type
- 2 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query 1 1 2m22s 2m22s 2m22s 2m22s lock table edit.db_link in access share mode;-
LOCK TABLE edit.db_link IN ACCESS SHARE MODE;
Date: 2025-02-26 14:02:25
-
LOCK TABLE edit.db_link IN ACCESS SHARE MODE;
Date: 2025-02-26 14:02:25
2 1 2s391ms 2s391ms 2s391ms 2s391ms select * from pgbulkload.pg_bulkload (?);-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-02-27 13:54:42 Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-02-27 14:25:51 Bind query: yes
-
SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-02-26 14:02:25 Bind query: yes
Queries that waited the most
Rank Wait time Query 1 2m22s LOCK TABLE edit.db_link IN ACCESS SHARE MODE;[ Date: 2025-02-26 14:02:25 ]
2 2s391ms SELECT * FROM pgbulkload.pg_bulkload ($1);[ Date: 2025-02-26 14:03:26 ]
-
Queries
Queries by type
Key values
- 20,432 Total read queries
- 747 Total write queries
Queries by database
Key values
- unknown Main database
- 16,091 Requests
- 2d2h11m7s (unknown)
- Main time consuming database
Database Request type Count Duration ctdprd51 Total 5,119 8h51m11s copy to 48 26m14s cte 75 3m36s ddl 1 4s787ms insert 5 12m54s others 2 3s990ms select 4,987 8h8m15s tcl 1 1s546ms postgres Total 2 3s232ms select 2 3s232ms unknown Total 16,091 2d2h11m7s copy to 266 1h53m35s cte 261 10m27s ddl 57 40m48s insert 25 41m46s others 31 58m9s select 15,443 1d21h9m53s update 8 36m25s Queries by user
Key values
- unknown Main user
- 35,424 Requests
User Request type Count Duration edit Total 4 31s858ms insert 2 17s838ms select 2 14s19ms editeu Total 3 8s779ms select 3 8s779ms load Total 79 53m24s others 2 5s373ms select 77 53m19s postgres Total 106 57m22s copy to 106 57m22s pub1 Total 3 15s341ms select 3 15s341ms pub2 Total 21 26m15s ddl 2 9s575ms insert 4 25m26s select 12 34s371ms tcl 3 4s638ms pubc Total 5 6s655ms others 3 3s911ms select 2 2s744ms pubeu Total 11,003 15h14m4s cte 136 6m22s insert 4 4s711ms select 10,863 15h7m36s qaeu Total 189 2h20m24s cte 26 1m30s select 163 2h18m53s unknown Total 35,424 4d8h54m53s copy to 712 6h48m34s cte 522 20m49s ddl 114 1h21m36s insert 50 1h23m32s others 57 1h55m48s select 33,953 3d19h51m39s update 16 1h12m51s zbx_monitor Total 6 9s697ms select 6 9s697ms Duration by user
Key values
- 4d8h54m53s (unknown) Main time consuming user
User Request type Count Duration edit Total 4 31s858ms insert 2 17s838ms select 2 14s19ms editeu Total 3 8s779ms select 3 8s779ms load Total 79 53m24s others 2 5s373ms select 77 53m19s postgres Total 106 57m22s copy to 106 57m22s pub1 Total 3 15s341ms select 3 15s341ms pub2 Total 21 26m15s ddl 2 9s575ms insert 4 25m26s select 12 34s371ms tcl 3 4s638ms pubc Total 5 6s655ms others 3 3s911ms select 2 2s744ms pubeu Total 11,003 15h14m4s cte 136 6m22s insert 4 4s711ms select 10,863 15h7m36s qaeu Total 189 2h20m24s cte 26 1m30s select 163 2h18m53s unknown Total 35,424 4d8h54m53s copy to 712 6h48m34s cte 522 20m49s ddl 114 1h21m36s insert 50 1h23m32s others 57 1h55m48s select 33,953 3d19h51m39s update 16 1h12m51s zbx_monitor Total 6 9s697ms select 6 9s697ms Queries by host
Key values
- unknown Main host
- 46,843 Requests
- 5d4h47m36s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 21,125 Requests
- 2d10h20m41s (unknown)
- Main time consuming application
Application Request type Count Duration pgAdmin 4 - CONN:2164643 Total 1 7s9ms select 1 7s9ms pgAdmin 4 - CONN:264269 Total 1 8s919ms insert 1 8s919ms pgAdmin 4 - CONN:4952229 Total 1 2s788ms select 1 2s788ms pgAdmin 4 - CONN:5727894 Total 1 2s222ms select 1 2s222ms pgAdmin 4 - CONN:7007391 Total 1 1s204ms select 1 1s204ms pgAdmin 4 - CONN:9595947 Total 1 1s546ms tcl 1 1s546ms pgAdmin 4 - DB:ctdprd51 Total 1 1s917ms select 1 1s917ms pg_bulkload Total 25 14m42s select 25 14m42s pg_dump Total 48 26m14s copy to 48 26m14s psql Total 7 18s905ms ddl 1 4s787ms others 1 1s303ms select 5 12s814ms unknown Total 21,125 2d10h20m41s copy to 266 1h53m35s cte 336 14m4s ddl 57 40m48s insert 29 54m32s others 32 58m12s select 20,397 2d5h3m2s update 8 36m25s Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2025-02-27 18:49:18 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 20,913 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 13h5m36s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'NEOPLASMS' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2025-02-27 08:39:24 - Bind query: yes ]
2 2h5m7s select pub2.maint_term_derive_data ();[ Date: 2025-02-27 23:27:10 - Bind query: yes ]
3 1h45m57s select pub2.maint_gene_chem_ref_gene_form_refresh ();[ Date: 2025-02-27 19:22:03 - Bind query: yes ]
4 1h1m46s SELECT maint_term_derive_nm_fts ();[ Date: 2025-02-27 20:26:38 - Bind query: yes ]
5 49m15s VACUUM FULL ANALYZE;[ Date: 2025-02-27 21:21:37 - Bind query: yes ]
6 45m58s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');[ Date: 2025-02-27 13:42:47 - Bind query: yes ]
7 35m11s select pub2.maint_cached_value_refresh_data_metrics ();[ Date: 2025-02-28 00:12:27 - Bind query: yes ]
8 34m25s SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;[ Date: 2025-02-28 11:57:37 - Database: ctdprd51 - User: qaeu - Bind query: yes ]
9 33m12s SELECT i.id, edit.get_ixn_xml (i.id), edit.get_ixn_prose (i.id), edit.get_ixn_delimited_actions (i.id), i.ixn_type_id, r.reference_acc_txt, r.taxon_acc_txt, r.create_by, common.break_html_words (edit.get_ixn_prose_html (i.id), false) FROM edit.IXN i, edit.REFERENCE_IXN r where i.id = i.root_id and i.id = r.ixn_id and r.create_by not in ('bogusName') order by i.id asc;[ Date: 2025-02-27 11:19:17 - Bind query: yes ]
10 29m19s update pub2.GENE_DISEASE gd set exposure_reference_qty = ( select count(distinct reference_id) from pub2.GENE_DISEASE_REFERENCE gdr where gd.gene_id = gdr.gene_id and gd.disease_id = gdr.disease_id and reference_id in ( select id from pub2.REFERENCE r where has_exposures = true));[ Date: 2025-02-27 17:30:36 - Bind query: yes ]
11 25m43s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-02-28 00:25:45 ]
12 25m41s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-02-26 00:25:42 ]
13 25m25s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-03-01 00:25:26 ]
14 25m13s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-02-27 00:25:15 ]
15 25m10s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-02-25 00:25:12 ]
16 24m54s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-02-24 00:24:56 ]
17 24m51s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2025-02-23 00:24:53 ]
18 24m36s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2025-03-01 19:45:32 ]
19 24m36s insert into pub2.GENE_GO_ANNOT (gene_id, go_term_id, taxon_id, evidence_cd, is_not) select gene_id, go_term_id, taxon_id, evidence_cd, is_not from load.GENE_GO_ANNOT;[ Date: 2025-02-27 10:37:35 - Bind query: yes ]
20 24m24s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2025-03-01 19:01:29 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 13h26m9s 512 1s231ms 18m35s 1m34s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Feb 23 00 5 6m35s 1m19s 01 6 12s585ms 2s97ms 02 5 25m55s 5m11s 03 3 4m12s 1m24s 04 6 29m5s 4m50s 05 1 1s663ms 1s663ms 06 3 2m12s 44s20ms 08 5 10m51s 2m10s 09 2 5s83ms 2s541ms 10 6 5m28s 54s770ms 11 2 3s803ms 1s901ms 12 1 4m22s 4m22s 13 1 1s488ms 1s488ms 14 2 4s694ms 2s347ms 15 2 3s211ms 1s605ms 16 1 1s802ms 1s802ms 18 1 3s269ms 3s269ms 19 3 4m52s 1m37s 21 2 3m29s 1m44s 22 2 4s911ms 2s455ms 23 3 7s713ms 2s571ms Feb 24 00 2 18m37s 9m18s 01 1 1s764ms 1s764ms 02 3 5s456ms 1s818ms 03 1 1s600ms 1s600ms 04 2 3s982ms 1s991ms 05 1 3s123ms 3s123ms 07 1 3s255ms 3s255ms 08 1 2s404ms 2s404ms 09 3 5s618ms 1s872ms 10 1 1s630ms 1s630ms 11 1 1s622ms 1s622ms 12 2 6s499ms 3s249ms 14 2 3m14s 1m37s 16 3 5s102ms 1s700ms 17 4 7m54s 1m58s 18 2 4m7s 2m3s 19 4 5m42s 1m25s 20 2 3s555ms 1s777ms 21 2 4m46s 2m23s 22 5 8s248ms 1s649ms 23 3 7m2s 2m20s Feb 25 00 5 7m22s 1m28s 01 4 4m36s 1m9s 02 5 11s817ms 2s363ms 03 5 17m59s 3m35s 04 8 17s28ms 2s128ms 05 11 11m58s 1m5s 06 6 12s30ms 2s5ms 07 6 6m27s 1m4s 08 8 3m17s 24s674ms 09 16 33m42s 2m6s 10 4 7m37s 1m54s 11 9 3m50s 25s632ms 12 7 11m17s 1m36s 13 4 3m23s 50s817ms 14 4 8m19s 2m4s 15 7 14s149ms 2s21ms 16 13 18m51s 1m27s 17 12 14m22s 1m11s 18 6 2m3s 20s582ms 19 8 15m21s 1m55s 20 5 12m43s 2m32s 21 12 8m6s 40s565ms 22 8 23m33s 2m56s 23 7 18m45s 2m40s Feb 26 00 7 20m44s 2m57s 01 4 8s252ms 2s63ms 05 4 6m41s 1m40s 06 11 9m 49s96ms 07 5 2m52s 34s501ms 08 7 6m12s 53s186ms 09 6 6m22s 1m3s 10 11 18m6s 1m38s 11 8 7m39s 57s442ms 12 3 5s531ms 1s843ms 13 9 9m24s 1m2s 14 4 1m18s 19s590ms 15 2 4s267ms 2s133ms 16 1 5m2s 5m2s 17 2 17m54s 8m57s 22 1 1s553ms 1s553ms Feb 27 00 1 1s676ms 1s676ms 03 1 3s223ms 3s223ms 04 1 2s103ms 2s103ms 05 3 11m42s 3m54s 06 1 11m33s 11m33s 08 3 10m25s 3m28s 09 1 4m52s 4m52s 11 2 17m58s 8m59s 12 2 23m17s 11m38s 13 4 2m38s 39s588ms 14 1 17m52s 17m52s 16 2 2m9s 1m4s 17 3 16s539ms 5s513ms 18 2 4s13ms 2s6ms 19 1 3s621ms 3s621ms 20 1 3s521ms 3s521ms 21 4 3m1s 45s379ms 22 3 3m18s 1m6s 23 2 3s222ms 1s611ms Feb 28 00 3 7m37s 2m32s 01 1 2s158ms 2s158ms 02 3 13m22s 4m27s 03 2 1m48s 54s225ms 04 1 1s611ms 1s611ms 05 1 1s454ms 1s454ms 06 2 5s66ms 2s533ms 07 2 4s95ms 2s47ms 08 1 1s806ms 1s806ms 09 1 1s770ms 1s770ms 10 3 5m26s 1m48s 11 2 4m49s 2m24s 12 3 7s4ms 2s334ms 13 3 7s165ms 2s388ms 14 2 6m29s 3m14s 15 3 5s30ms 1s676ms 16 1 1s575ms 1s575ms 17 3 18m33s 6m11s 18 3 5s499ms 1s833ms 19 1 1s458ms 1s458ms 20 2 6s666ms 3s333ms 21 3 4s934ms 1s644ms 22 1 1s498ms 1s498ms 23 3 4s788ms 1s596ms Mar 01 00 3 5m24s 1m48s 01 1 3s213ms 3s213ms 02 2 4s896ms 2s448ms 03 1 1s708ms 1s708ms 04 4 7s537ms 1s884ms 05 5 17m58s 3m35s 06 1 17m48s 17m48s 07 1 2s444ms 2s444ms 08 2 4s641ms 2s320ms 09 2 3s368ms 1s684ms 10 2 21m5s 10m32s 11 1 1s531ms 1s531ms 12 1 3s263ms 3s263ms 15 1 1s584ms 1s584ms 16 2 5s31ms 2s515ms 17 3 22m36s 7m32s 18 1 5m2s 5m2s 19 2 17m55s 8m57s 21 3 4m16s 1m25s 22 11 28m8s 2m33s 23 2 3s531ms 1s765ms [ User: pubeu - Total duration: 3h15m14s - Times executed: 111 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-24 00:24:06 Duration: 18m35s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-28 17:07:48 Duration: 18m29s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-03-01 10:56:25 Duration: 18m11s Bind query: yes
2 13h5m36s 1 13h5m36s 13h5m36s 13h5m36s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Feb 27 08 1 13h5m36s 13h5m36s -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'NEOPLASMS' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2025-02-27 08:39:24 Duration: 13h5m36s Bind query: yes
3 2h56m59s 7 24m51s 25m43s 25m17s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Feb 23 00 1 24m51s 24m51s Feb 24 00 1 24m54s 24m54s Feb 25 00 1 25m10s 25m10s Feb 26 00 1 25m41s 25m41s Feb 27 00 1 25m13s 25m13s Feb 28 00 1 25m43s 25m43s Mar 01 00 1 25m25s 25m25s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-02-28 00:25:45 Duration: 25m43s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-02-26 00:25:42 Duration: 25m41s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-03-01 00:25:26 Duration: 25m25s
4 2h5m7s 1 2h5m7s 2h5m7s 2h5m7s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Feb 27 23 1 2h5m7s 2h5m7s -
select pub2.maint_term_derive_data ();
Date: 2025-02-27 23:27:10 Duration: 2h5m7s Bind query: yes
5 1h50m35s 2,108 1s1ms 7s78ms 3s147ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Feb 23 00 23 57s73ms 2s481ms 01 14 45s692ms 3s263ms 02 38 2m1s 3s188ms 03 19 53s885ms 2s836ms 04 27 1m18s 2s923ms 05 16 54s386ms 3s399ms 06 21 1m2s 2s968ms 07 11 30s618ms 2s783ms 08 19 48s611ms 2s558ms 09 21 1m4s 3s56ms 10 31 1m39s 3s214ms 11 20 1m6s 3s301ms 12 14 49s124ms 3s508ms 13 9 21s391ms 2s376ms 14 13 47s890ms 3s683ms 15 8 29s399ms 3s674ms 16 2 12s876ms 6s438ms 17 2 4s929ms 2s464ms 18 4 7s740ms 1s935ms 19 2 9s224ms 4s612ms 20 9 24s595ms 2s732ms 21 12 43s943ms 3s661ms 22 17 51s687ms 3s40ms 23 19 59s704ms 3s142ms Feb 24 00 11 28s64ms 2s551ms 01 15 44s324ms 2s954ms 02 7 17s72ms 2s438ms 03 5 12s370ms 2s474ms 04 7 16s503ms 2s357ms 05 8 17s248ms 2s156ms 06 3 10s295ms 3s431ms 07 4 10s202ms 2s550ms 08 8 27s142ms 3s392ms 09 8 27s941ms 3s492ms 10 8 31s629ms 3s953ms 11 14 49s219ms 3s515ms 12 12 29s561ms 2s463ms 13 9 29s413ms 3s268ms 14 17 53s593ms 3s152ms 15 8 26s174ms 3s271ms 16 9 34s954ms 3s883ms 17 4 9s785ms 2s446ms 18 11 24s33ms 2s184ms 19 11 40s371ms 3s670ms 20 23 1m3s 2s773ms 21 23 1m10s 3s57ms 22 12 40s843ms 3s403ms 23 20 48s245ms 2s412ms Feb 25 00 25 1m32s 3s712ms 01 23 1m20s 3s491ms 02 21 54s792ms 2s609ms 03 30 1m29s 2s979ms 04 31 1m50s 3s579ms 05 28 1m32s 3s315ms 06 20 1m 3s30ms 07 16 43s652ms 2s728ms 08 15 47s387ms 3s159ms 09 41 1m59s 2s912ms 10 23 1m7s 2s936ms 11 18 58s438ms 3s246ms 12 35 1m53s 3s230ms 13 36 1m40s 2s797ms 14 18 1m3s 3s537ms 15 18 54s677ms 3s37ms 16 23 1m5s 2s844ms 17 35 1m57s 3s351ms 18 33 1m48s 3s288ms 19 27 1m41s 3s773ms 20 33 2m5s 3s801ms 21 23 1m5s 2s866ms 22 28 1m46s 3s818ms 23 29 1m45s 3s651ms Feb 26 00 25 1m4s 2s599ms 01 34 1m44s 3s82ms 02 10 36s840ms 3s684ms 05 17 55s901ms 3s288ms 06 23 1m16s 3s322ms 07 25 1m20s 3s229ms 08 18 55s727ms 3s95ms 09 39 2m2s 3s140ms 10 20 1m3s 3s196ms 11 29 1m36s 3s317ms 12 32 1m48s 3s379ms 13 32 1m42s 3s217ms 14 17 51s83ms 3s4ms 15 12 32s944ms 2s745ms 17 1 1s944ms 1s944ms 18 3 11s84ms 3s694ms 19 2 3s946ms 1s973ms 20 2 7s956ms 3s978ms 21 1 3s76ms 3s76ms 23 9 27s528ms 3s58ms Feb 27 00 3 6s981ms 2s327ms 02 2 8s163ms 4s81ms 03 4 14s110ms 3s527ms 05 1 1s837ms 1s837ms 06 1 1s923ms 1s923ms 08 1 6s496ms 6s496ms 09 1 2s59ms 2s59ms 11 5 12s618ms 2s523ms 12 3 19s281ms 6s427ms 13 8 20s499ms 2s562ms 14 9 26s658ms 2s962ms 15 8 21s184ms 2s648ms 16 5 10s132ms 2s26ms 17 4 18s48ms 4s512ms 18 10 34s770ms 3s477ms 19 9 31s455ms 3s495ms 20 11 26s412ms 2s401ms 21 3 9s978ms 3s326ms 22 13 45s45ms 3s465ms 23 15 43s119ms 2s874ms Feb 28 00 14 30s843ms 2s203ms 01 5 16s612ms 3s322ms 02 9 24s625ms 2s736ms 03 13 43s911ms 3s377ms 04 3 11s484ms 3s828ms 05 10 37s376ms 3s737ms 06 6 12s192ms 2s32ms 07 5 14s987ms 2s997ms 08 6 15s886ms 2s647ms 09 8 29s860ms 3s732ms 10 7 19s344ms 2s763ms 11 5 24s780ms 4s956ms 12 7 19s598ms 2s799ms 13 11 25s461ms 2s314ms 14 11 28s926ms 2s629ms 15 11 35s71ms 3s188ms 16 3 15s364ms 5s121ms 17 5 20s953ms 4s190ms 18 20 1m13s 3s671ms 19 7 23s45ms 3s292ms 20 8 32s449ms 4s56ms 21 13 35s164ms 2s704ms 22 7 19s361ms 2s765ms 23 7 28s396ms 4s56ms Mar 01 00 9 30s357ms 3s373ms 01 9 29s943ms 3s327ms 02 8 38s685ms 4s835ms 03 5 14s673ms 2s934ms 04 6 15s12ms 2s502ms 05 6 15s8ms 2s501ms 06 7 20s397ms 2s913ms 07 7 16s795ms 2s399ms 08 9 23s623ms 2s624ms 09 12 32s477ms 2s706ms 10 6 11s460ms 1s910ms 11 6 15s531ms 2s588ms 12 3 14s409ms 4s803ms 13 9 25s413ms 2s823ms 14 7 27s44ms 3s863ms 15 10 39s259ms 3s925ms 16 10 34s484ms 3s448ms 17 8 23s126ms 2s890ms 18 6 26s942ms 4s490ms 19 7 17s672ms 2s524ms 20 8 22s677ms 2s834ms 21 8 22s199ms 2s774ms 22 10 38s455ms 3s845ms 23 7 15s692ms 2s241ms [ User: pubeu - Total duration: 24m57s - Times executed: 467 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-26 09:06:17 Duration: 7s78ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-28 20:39:31 Duration: 7s20ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-26 08:51:14 Duration: 7s11ms Bind query: yes
6 1h45m57s 1 1h45m57s 1h45m57s 1h45m57s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Feb 27 19 1 1h45m57s 1h45m57s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2025-02-27 19:22:03 Duration: 1h45m57s Bind query: yes
7 1h31m9s 4,511 1s93ms 2s545ms 1s212ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Feb 23 00 30 35s684ms 1s189ms 01 50 58s966ms 1s179ms 02 37 44s297ms 1s197ms 03 27 32s425ms 1s200ms 04 30 35s944ms 1s198ms 05 24 28s867ms 1s202ms 06 18 21s689ms 1s204ms 07 23 27s414ms 1s191ms 08 14 17s240ms 1s231ms 09 26 31s283ms 1s203ms 10 34 40s207ms 1s182ms 11 14 16s652ms 1s189ms 12 23 27s462ms 1s194ms 13 20 23s756ms 1s187ms 14 18 21s666ms 1s203ms 15 25 29s226ms 1s169ms 16 34 40s185ms 1s181ms 17 11 12s902ms 1s172ms 18 16 18s428ms 1s151ms 19 20 22s693ms 1s134ms 20 22 26s123ms 1s187ms 21 15 17s577ms 1s171ms 22 27 31s871ms 1s180ms 23 25 29s680ms 1s187ms Feb 24 00 28 34s440ms 1s230ms 01 31 36s674ms 1s183ms 02 15 17s946ms 1s196ms 03 10 11s818ms 1s181ms 04 15 17s564ms 1s170ms 05 24 28s523ms 1s188ms 06 12 14s368ms 1s197ms 07 14 16s628ms 1s187ms 08 31 36s597ms 1s180ms 09 10 11s880ms 1s188ms 10 11 12s921ms 1s174ms 11 18 21s318ms 1s184ms 12 12 14s131ms 1s177ms 13 22 25s941ms 1s179ms 14 19 21s905ms 1s152ms 15 24 27s782ms 1s157ms 16 20 23s272ms 1s163ms 17 8 9s306ms 1s163ms 18 38 44s425ms 1s169ms 19 18 20s907ms 1s161ms 20 23 26s927ms 1s170ms 21 29 34s189ms 1s178ms 22 25 29s290ms 1s171ms 23 36 42s851ms 1s190ms Feb 25 00 29 34s792ms 1s199ms 01 38 45s280ms 1s191ms 02 41 48s527ms 1s183ms 03 48 57s443ms 1s196ms 04 29 34s488ms 1s189ms 05 38 45s921ms 1s208ms 06 35 41s808ms 1s194ms 07 39 46s416ms 1s190ms 08 27 32s451ms 1s201ms 09 32 38s760ms 1s211ms 10 46 54s95ms 1s175ms 11 28 32s843ms 1s172ms 12 32 37s394ms 1s168ms 13 32 37s644ms 1s176ms 14 43 49s828ms 1s158ms 15 38 44s461ms 1s170ms 16 50 58s624ms 1s172ms 17 28 33s159ms 1s184ms 18 50 58s693ms 1s173ms 19 46 54s177ms 1s177ms 20 37 43s483ms 1s175ms 21 30 35s260ms 1s175ms 22 39 46s970ms 1s204ms 23 37 45s536ms 1s230ms Feb 26 00 38 46s331ms 1s219ms 01 35 42s153ms 1s204ms 02 9 11s26ms 1s225ms 05 27 32s967ms 1s221ms 06 32 39s314ms 1s228ms 07 24 28s705ms 1s196ms 08 21 27s404ms 1s304ms 09 26 32s602ms 1s253ms 10 39 51s437ms 1s318ms 11 33 40s984ms 1s241ms 12 45 54s938ms 1s220ms 13 25 32s7ms 1s280ms 14 39 49s390ms 1s266ms 15 15 18s801ms 1s253ms 16 10 13s751ms 1s375ms 17 9 11s38ms 1s226ms 18 25 30s807ms 1s232ms 19 5 6s535ms 1s307ms 20 22 29s470ms 1s339ms 21 9 12s636ms 1s404ms 22 19 23s381ms 1s230ms 23 16 20s698ms 1s293ms Feb 27 00 17 20s963ms 1s233ms 01 22 27s250ms 1s238ms 02 17 21s922ms 1s289ms 03 22 27s92ms 1s231ms 04 13 16s336ms 1s256ms 05 19 23s313ms 1s227ms 06 8 10s858ms 1s357ms 07 18 21s905ms 1s216ms 08 17 24s221ms 1s424ms 09 6 7s196ms 1s199ms 10 27 33s239ms 1s231ms 11 17 20s765ms 1s221ms 12 18 21s585ms 1s199ms 13 30 36s867ms 1s228ms 14 29 35s205ms 1s213ms 15 25 31s395ms 1s255ms 16 31 38s431ms 1s239ms 17 16 19s577ms 1s223ms 18 19 21s927ms 1s154ms 19 32 38s402ms 1s200ms 20 25 31s10ms 1s240ms 21 22 27s757ms 1s261ms 22 27 33s186ms 1s229ms 23 89 1m53s 1s274ms Feb 28 00 44 54s81ms 1s229ms 01 28 33s712ms 1s204ms 02 32 39s787ms 1s243ms 03 37 45s441ms 1s228ms 04 77 1m33s 1s217ms 05 85 1m42s 1s208ms 06 67 1m23s 1s246ms 07 20 24s171ms 1s208ms 08 30 35s429ms 1s180ms 09 18 21s215ms 1s178ms 10 20 23s712ms 1s185ms 11 25 30s99ms 1s203ms 12 14 16s907ms 1s207ms 13 16 20s547ms 1s284ms 14 24 28s915ms 1s204ms 15 28 33s728ms 1s204ms 16 28 33s948ms 1s212ms 17 22 27s159ms 1s234ms 18 28 35s229ms 1s258ms 19 28 33s858ms 1s209ms 20 23 27s914ms 1s213ms 21 23 27s851ms 1s210ms 22 31 37s749ms 1s217ms 23 15 18s88ms 1s205ms Mar 01 00 28 34s4ms 1s214ms 01 27 32s573ms 1s206ms 02 19 22s785ms 1s199ms 03 39 47s828ms 1s226ms 04 23 28s465ms 1s237ms 05 33 40s141ms 1s216ms 06 26 31s612ms 1s215ms 07 29 35s123ms 1s211ms 08 23 27s682ms 1s203ms 09 21 26s158ms 1s245ms 10 31 37s595ms 1s212ms 11 33 39s698ms 1s202ms 12 22 26s521ms 1s205ms 13 20 23s840ms 1s192ms 14 12 14s461ms 1s205ms 15 22 26s390ms 1s199ms 16 20 24s125ms 1s206ms 17 19 22s701ms 1s194ms 18 36 43s443ms 1s206ms 19 28 33s269ms 1s188ms 20 28 32s607ms 1s164ms 21 30 35s57ms 1s168ms 22 113 2m30s 1s334ms 23 9 10s895ms 1s210ms [ User: pubeu - Total duration: 23m8s - Times executed: 1128 ]
[ User: qaeu - Total duration: 1s305ms - Times executed: 1 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1538806' or receptorTerm.id = '1538806' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:16:59 Duration: 2s545ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1461036' or receptorTerm.id = '1461036' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:06:44 Duration: 2s516ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2068838' or receptorTerm.id = '2068838' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:16:58 Duration: 2s496ms Database: ctdprd51 User: pubeu Bind query: yes
8 1h27m48s 2,070 1s 5s319ms 2s545ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Feb 23 00 23 59s662ms 2s594ms 01 26 1m17s 2s984ms 02 18 55s227ms 3s68ms 03 24 1m6s 2s755ms 04 27 1m2s 2s326ms 05 25 1m7s 2s687ms 06 16 47s404ms 2s962ms 07 13 29s456ms 2s265ms 08 16 39s875ms 2s492ms 09 13 30s632ms 2s356ms 10 25 1m6s 2s645ms 11 12 27s605ms 2s300ms 12 10 25s238ms 2s523ms 13 6 18s887ms 3s147ms 14 13 33s629ms 2s586ms 15 7 24s103ms 3s443ms 16 5 14s132ms 2s826ms 17 2 7s535ms 3s767ms 18 5 9s496ms 1s899ms 19 6 19s68ms 3s178ms 20 11 23s914ms 2s174ms 21 14 36s661ms 2s618ms 22 11 36s727ms 3s338ms 23 23 1m 2s610ms Feb 24 00 9 23s946ms 2s660ms 01 11 28s963ms 2s633ms 02 8 10s427ms 1s303ms 03 8 17s327ms 2s165ms 04 10 25s632ms 2s563ms 05 9 27s152ms 3s16ms 06 5 14s386ms 2s877ms 07 4 13s523ms 3s380ms 08 8 20s262ms 2s532ms 09 5 12s249ms 2s449ms 10 12 29s270ms 2s439ms 11 9 23s157ms 2s573ms 12 11 29s327ms 2s666ms 13 10 20s863ms 2s86ms 14 9 18s600ms 2s66ms 15 4 7s45ms 1s761ms 16 7 17s336ms 2s476ms 17 6 12s725ms 2s120ms 18 9 18s965ms 2s107ms 19 5 16s93ms 3s218ms 20 8 21s66ms 2s633ms 21 17 53s917ms 3s171ms 22 14 47s968ms 3s426ms 23 18 44s704ms 2s483ms Feb 25 00 27 1m17s 2s880ms 01 27 1m1s 2s290ms 02 18 53s891ms 2s993ms 03 30 1m8s 2s269ms 04 30 1m36s 3s200ms 05 26 1m12s 2s805ms 06 19 53s768ms 2s829ms 07 23 1m2s 2s729ms 08 19 54s380ms 2s862ms 09 26 1m2s 2s393ms 10 32 1m31s 2s860ms 11 17 40s420ms 2s377ms 12 24 56s193ms 2s341ms 13 20 44s284ms 2s214ms 14 25 1m13s 2s951ms 15 27 1m18s 2s897ms 16 34 1m32s 2s730ms 17 15 40s735ms 2s715ms 18 25 1m1s 2s466ms 19 26 1m5s 2s513ms 20 21 45s30ms 2s144ms 21 29 58s117ms 2s4ms 22 18 34s267ms 1s903ms 23 26 1m18s 3s29ms Feb 26 00 22 44s877ms 2s39ms 01 36 1m13s 2s49ms 02 7 22s273ms 3s181ms 03 1 1s363ms 1s363ms 05 14 31s615ms 2s258ms 06 30 1m20s 2s692ms 07 14 34s969ms 2s497ms 08 19 47s920ms 2s522ms 09 36 1m35s 2s646ms 10 19 45s48ms 2s370ms 11 13 33s126ms 2s548ms 12 22 44s759ms 2s34ms 13 21 1m3s 3s17ms 14 17 42s534ms 2s502ms 15 8 22s238ms 2s779ms 16 5 15s731ms 3s146ms 17 4 9s578ms 2s394ms 18 2 4s152ms 2s76ms 19 1 1s45ms 1s45ms 21 3 6s132ms 2s44ms 22 2 7s125ms 3s562ms 23 10 21s419ms 2s141ms Feb 27 00 1 1s213ms 1s213ms 01 1 1s215ms 1s215ms 02 3 5s692ms 1s897ms 03 1 4s335ms 4s335ms 04 2 8s732ms 4s366ms 05 2 6s161ms 3s80ms 06 1 1s259ms 1s259ms 07 1 4s665ms 4s665ms 08 2 6s55ms 3s27ms 09 1 3s446ms 3s446ms 11 8 15s485ms 1s935ms 12 10 24s198ms 2s419ms 13 7 19s800ms 2s828ms 14 14 32s419ms 2s315ms 15 5 15s648ms 3s129ms 16 13 29s123ms 2s240ms 17 4 9s568ms 2s392ms 18 6 12s776ms 2s129ms 19 16 37s46ms 2s315ms 20 23 50s385ms 2s190ms 21 9 23s466ms 2s607ms 22 20 47s277ms 2s363ms 23 15 46s284ms 3s85ms Feb 28 00 7 10s648ms 1s521ms 01 10 30s55ms 3s5ms 02 6 11s888ms 1s981ms 03 8 13s511ms 1s688ms 04 12 25s921ms 2s160ms 05 13 36s874ms 2s836ms 06 8 18s145ms 2s268ms 07 6 16s251ms 2s708ms 08 4 10s194ms 2s548ms 09 10 31s782ms 3s178ms 10 5 16s302ms 3s260ms 11 11 30s948ms 2s813ms 12 8 22s455ms 2s806ms 13 5 11s392ms 2s278ms 14 18 49s18ms 2s723ms 15 10 21s426ms 2s142ms 16 7 23s47ms 3s292ms 17 11 30s88ms 2s735ms 18 16 38s370ms 2s398ms 19 8 22s823ms 2s852ms 20 10 27s170ms 2s717ms 21 11 17s517ms 1s592ms 22 6 10s280ms 1s713ms 23 9 16s28ms 1s780ms Mar 01 00 13 35s431ms 2s725ms 01 16 46s353ms 2s897ms 02 10 19s969ms 1s996ms 03 7 15s552ms 2s221ms 04 9 24s102ms 2s678ms 05 10 26s333ms 2s633ms 06 15 27s319ms 1s821ms 07 5 11s790ms 2s358ms 08 10 22s161ms 2s216ms 09 13 26s966ms 2s74ms 10 7 15s522ms 2s217ms 11 9 21s237ms 2s359ms 12 10 25s245ms 2s524ms 13 9 20s772ms 2s308ms 14 4 11s387ms 2s846ms 15 9 24s228ms 2s692ms 16 17 37s277ms 2s192ms 17 14 45s825ms 3s273ms 18 4 7s146ms 1s786ms 19 5 7s344ms 1s468ms 20 7 14s856ms 2s122ms 21 12 29s31ms 2s419ms 22 5 8s776ms 1s755ms 23 9 27s224ms 3s24ms [ User: pubeu - Total duration: 21m20s - Times executed: 513 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-02-26 08:52:49 Duration: 5s319ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-02-26 06:29:18 Duration: 5s66ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-02-26 09:06:06 Duration: 5s17ms Database: ctdprd51 User: pubeu Bind query: yes
9 1h4m2s 576 1s11ms 28s141ms 6s671ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Feb 23 00 7 47s431ms 6s775ms 01 3 35s828ms 11s942ms 02 7 33s613ms 4s801ms 03 4 26s873ms 6s718ms 04 2 24s858ms 12s429ms 05 3 13s291ms 4s430ms 06 6 20s659ms 3s443ms 07 2 5s784ms 2s892ms 08 8 1m43s 12s954ms 09 5 36s48ms 7s209ms 10 4 11s398ms 2s849ms 11 2 6s105ms 3s52ms 12 2 38s54ms 19s27ms 13 4 35s567ms 8s891ms 14 1 3s905ms 3s905ms 15 2 11s282ms 5s641ms 16 1 3s816ms 3s816ms 17 1 1s905ms 1s905ms 20 2 22s745ms 11s372ms 21 4 18s960ms 4s740ms 22 1 11s284ms 11s284ms 23 6 16s696ms 2s782ms Feb 24 00 3 35s423ms 11s807ms 01 3 57s550ms 19s183ms 02 3 22s466ms 7s488ms 03 1 3s422ms 3s422ms 04 2 4s861ms 2s430ms 05 1 3s933ms 3s933ms 06 1 1s642ms 1s642ms 07 3 22s403ms 7s467ms 08 2 2s859ms 1s429ms 09 1 1s418ms 1s418ms 10 2 23s496ms 11s748ms 11 4 28s795ms 7s198ms 13 3 4s265ms 1s421ms 14 3 5s206ms 1s735ms 15 2 4s617ms 2s308ms 16 4 43s498ms 10s874ms 17 2 30s981ms 15s490ms 18 3 36s159ms 12s53ms 20 2 21s464ms 10s732ms 21 4 32s28ms 8s7ms 22 5 12s874ms 2s574ms 23 3 6s235ms 2s78ms Feb 25 00 4 8s88ms 2s22ms 01 12 1m27s 7s284ms 02 6 49s589ms 8s264ms 03 7 34s820ms 4s974ms 04 10 20s238ms 2s23ms 05 7 1m12s 10s346ms 06 5 29s 5s800ms 07 4 14s444ms 3s611ms 08 11 1m2s 5s697ms 09 5 15s568ms 3s113ms 10 6 31s725ms 5s287ms 11 7 21s367ms 3s52ms 12 2 24s574ms 12s287ms 13 7 50s601ms 7s228ms 14 9 47s691ms 5s299ms 15 5 10s143ms 2s28ms 16 8 1m26s 10s789ms 17 3 6s286ms 2s95ms 18 4 28s308ms 7s77ms 19 8 15s985ms 1s998ms 20 9 48s276ms 5s364ms 21 8 50s767ms 6s345ms 22 7 52s954ms 7s564ms 23 14 1m32s 6s631ms Feb 26 00 11 45s711ms 4s155ms 01 6 59s175ms 9s862ms 02 5 29s904ms 5s980ms 03 1 24s16ms 24s16ms 05 2 11s441ms 5s720ms 06 5 10s143ms 2s28ms 07 3 5s982ms 1s994ms 08 7 53s974ms 7s710ms 09 7 51s699ms 7s385ms 10 7 14s834ms 2s119ms 11 3 4s825ms 1s608ms 12 3 33s764ms 11s254ms 13 6 1m12s 12s105ms 14 7 57s411ms 8s201ms 15 3 59s632ms 19s877ms 17 1 3s988ms 3s988ms 20 2 15s705ms 7s852ms Feb 27 01 2 4s837ms 2s418ms 02 2 8s610ms 4s305ms 04 1 1s384ms 1s384ms 08 4 18s237ms 4s559ms 11 4 52s668ms 13s167ms 13 2 34s249ms 17s124ms 14 5 55s988ms 11s197ms 15 3 31s268ms 10s422ms 16 2 29s482ms 14s741ms 17 3 43s615ms 14s538ms 18 3 9s122ms 3s40ms 19 6 47s960ms 7s993ms 20 1 8s845ms 8s845ms 21 2 26s841ms 13s420ms 22 4 21s466ms 5s366ms 23 3 46s804ms 15s601ms Feb 28 00 2 8s48ms 4s24ms 01 2 11s568ms 5s784ms 02 2 6s99ms 3s49ms 03 10 38s558ms 3s855ms 04 4 9s674ms 2s418ms 05 3 3s937ms 1s312ms 06 4 27s556ms 6s889ms 07 2 23s521ms 11s760ms 08 5 58s272ms 11s654ms 09 3 11s946ms 3s982ms 10 4 50s881ms 12s720ms 11 4 33s600ms 8s400ms 12 2 12s335ms 6s167ms 13 1 3s951ms 3s951ms 14 2 11s814ms 5s907ms 15 2 9s728ms 4s864ms 17 1 4s443ms 4s443ms 18 1 22s470ms 22s470ms 19 6 20s2ms 3s333ms 20 5 9s756ms 1s951ms 21 2 10s931ms 5s465ms 22 4 54s898ms 13s724ms 23 2 4s699ms 2s349ms Mar 01 00 2 2s654ms 1s327ms 01 4 30s548ms 7s637ms 02 1 1s341ms 1s341ms 03 3 28s397ms 9s465ms 04 5 41s376ms 8s275ms 05 6 48s672ms 8s112ms 06 3 27s118ms 9s39ms 07 1 1s96ms 1s96ms 08 1 1s77ms 1s77ms 09 1 3s653ms 3s653ms 10 2 11s986ms 5s993ms 11 4 46s505ms 11s626ms 12 3 46s405ms 15s468ms 13 1 10s322ms 10s322ms 14 1 7s890ms 7s890ms 15 3 10s408ms 3s469ms 17 3 31s518ms 10s506ms 18 4 23s683ms 5s920ms 19 3 6s512ms 2s170ms 20 2 4s796ms 2s398ms 21 3 5s160ms 1s720ms 22 16 1m5s 4s95ms 23 3 43s880ms 14s626ms [ User: pubeu - Total duration: 18m57s - Times executed: 153 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-27 16:47:59 Duration: 28s141ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-27 17:36:39 Duration: 27s681ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-28 11:52:58 Duration: 27s104ms Database: ctdprd51 User: pubeu Bind query: yes
10 1h1m46s 1 1h1m46s 1h1m46s 1h1m46s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Feb 27 20 1 1h1m46s 1h1m46s -
SELECT maint_term_derive_nm_fts ();
Date: 2025-02-27 20:26:38 Duration: 1h1m46s Bind query: yes
11 54m18s 984 1s4ms 12s518ms 3s311ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Feb 23 00 3 7s360ms 2s453ms 01 2 3s585ms 1s792ms 02 5 9s266ms 1s853ms 03 6 17s896ms 2s982ms 04 1 5s234ms 5s234ms 05 6 21s921ms 3s653ms 06 2 3s169ms 1s584ms 07 3 5s393ms 1s797ms 08 3 6s266ms 2s88ms 09 4 10s126ms 2s531ms 10 5 22s230ms 4s446ms 11 2 7s838ms 3s919ms 13 2 7s386ms 3s693ms 14 3 11s772ms 3s924ms 15 2 13s928ms 6s964ms 16 1 1s301ms 1s301ms 17 1 2s403ms 2s403ms 19 1 1s178ms 1s178ms 20 1 2s396ms 2s396ms 21 9 26s768ms 2s974ms 22 2 5s121ms 2s560ms 23 9 30s225ms 3s358ms Feb 24 00 9 24s827ms 2s758ms 02 3 5s388ms 1s796ms 03 3 6s151ms 2s50ms 06 1 6s111ms 6s111ms 07 2 4s94ms 2s47ms 08 1 2s459ms 2s459ms 09 2 3s728ms 1s864ms 10 2 8s53ms 4s26ms 11 3 13s942ms 4s647ms 12 7 23s469ms 3s352ms 13 4 10s933ms 2s733ms 14 2 6s426ms 3s213ms 15 2 2s691ms 1s345ms 16 2 8s691ms 4s345ms 17 9 29s873ms 3s319ms 18 4 21s25ms 5s256ms 19 3 10s222ms 3s407ms 20 4 8s341ms 2s85ms 21 5 10s493ms 2s98ms 22 4 13s611ms 3s402ms 23 4 14s464ms 3s616ms Feb 25 00 5 23s750ms 4s750ms 01 3 5s408ms 1s802ms 02 2 4s758ms 2s379ms 03 3 7s572ms 2s524ms 04 4 10s684ms 2s671ms 05 4 8s94ms 2s23ms 06 1 1s42ms 1s42ms 07 2 3s830ms 1s915ms 08 17 54s62ms 3s180ms 09 5 15s289ms 3s57ms 10 4 6s137ms 1s534ms 11 2 4s477ms 2s238ms 12 2 5s568ms 2s784ms 13 3 12s708ms 4s236ms 14 2 5s680ms 2s840ms 15 2 7s89ms 3s544ms 16 2 6s404ms 3s202ms 17 5 24s365ms 4s873ms 18 13 39s265ms 3s20ms 19 4 7s480ms 1s870ms 20 6 18s879ms 3s146ms 21 20 58s335ms 2s916ms 22 7 25s618ms 3s659ms 23 5 9s852ms 1s970ms Feb 26 00 4 17s30ms 4s257ms 01 3 14s685ms 4s895ms 02 3 8s488ms 2s829ms 05 5 14s679ms 2s935ms 06 7 14s299ms 2s42ms 07 8 16s294ms 2s36ms 08 15 40s717ms 2s714ms 09 4 10s16ms 2s504ms 10 8 20s350ms 2s543ms 11 7 21s274ms 3s39ms 12 9 27s448ms 3s49ms 13 5 14s895ms 2s979ms 14 2 7s402ms 3s701ms 15 12 1m 5s61ms 17 3 7s949ms 2s649ms 18 2 8s99ms 4s49ms 19 3 11s677ms 3s892ms 20 2 4s316ms 2s158ms 21 3 10s533ms 3s511ms 22 3 10s959ms 3s653ms 23 4 7s613ms 1s903ms Feb 27 00 5 22s282ms 4s456ms 01 3 5s420ms 1s806ms 02 11 34s730ms 3s157ms 03 7 22s577ms 3s225ms 04 4 14s518ms 3s629ms 05 1 1s160ms 1s160ms 06 6 15s362ms 2s560ms 07 3 6s78ms 2s26ms 08 1 1s255ms 1s255ms 09 1 2s503ms 2s503ms 10 3 3s833ms 1s277ms 11 9 30s943ms 3s438ms 12 7 29s161ms 4s165ms 13 4 11s615ms 2s903ms 14 8 15s952ms 1s994ms 15 15 59s502ms 3s966ms 16 16 39s756ms 2s484ms 17 4 16s429ms 4s107ms 18 16 1m6s 4s126ms 19 9 26s761ms 2s973ms 20 7 22s326ms 3s189ms 21 7 29s688ms 4s241ms 22 9 36s309ms 4s34ms 23 8 26s644ms 3s330ms Feb 28 00 4 10s898ms 2s724ms 01 6 26s413ms 4s402ms 02 9 46s579ms 5s175ms 03 11 35s779ms 3s252ms 04 9 32s507ms 3s611ms 05 10 39s77ms 3s907ms 06 5 13s669ms 2s733ms 07 11 34s18ms 3s92ms 08 8 25s112ms 3s139ms 09 7 17s198ms 2s456ms 10 12 43s853ms 3s654ms 11 13 49s715ms 3s824ms 12 7 21s712ms 3s101ms 13 10 26s59ms 2s605ms 14 8 22s221ms 2s777ms 15 6 31s282ms 5s213ms 16 4 12s543ms 3s135ms 17 15 1m7s 4s495ms 18 7 28s203ms 4s29ms 19 7 26s811ms 3s830ms 20 10 25s629ms 2s562ms 21 3 7s961ms 2s653ms 22 7 21s16ms 3s2ms 23 8 35s526ms 4s440ms Mar 01 00 10 37s830ms 3s783ms 01 14 48s561ms 3s468ms 02 12 42s552ms 3s546ms 03 7 16s168ms 2s309ms 04 9 38s258ms 4s250ms 05 13 57s25ms 4s386ms 06 11 36s835ms 3s348ms 07 11 41s137ms 3s739ms 08 7 25s825ms 3s689ms 09 7 14s424ms 2s60ms 10 9 30s729ms 3s414ms 11 11 34s344ms 3s122ms 12 10 35s797ms 3s579ms 13 6 14s850ms 2s475ms 14 10 33s25ms 3s302ms 15 6 22s892ms 3s815ms 16 12 48s934ms 4s77ms 17 10 45s446ms 4s544ms 18 9 32s937ms 3s659ms 19 9 30s144ms 3s349ms 20 11 42s412ms 3s855ms 21 5 12s599ms 2s519ms 22 18 50s216ms 2s789ms 23 12 49s780ms 4s148ms [ User: pubeu - Total duration: 15m31s - Times executed: 299 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-02-26 15:12:10 Duration: 12s518ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2091965') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-03-01 04:50:41 Duration: 12s88ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2091965') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-02-28 18:33:16 Duration: 11s756ms Bind query: yes
12 49m15s 1 49m15s 49m15s 49m15s vacuum full analyze;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Feb 27 21 1 49m15s 49m15s -
VACUUM FULL ANALYZE;
Date: 2025-02-27 21:21:37 Duration: 49m15s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2025-02-27 20:32:30 Duration: 0ms
13 47m58s 74 1s144ms 6m55s 38s902ms select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Feb 26 13 14 2m11s 9s372ms 14 17 12m31s 44s230ms 16 9 8m42s 58s41ms Feb 27 11 6 1m10s 11s770ms 13 3 8m12s 2m44s 14 4 7m10s 1m47s 15 14 4m3s 17s367ms 16 7 3m57s 33s907ms [ User: load - Total duration: 14m42s - Times executed: 25 ]
[ Application: pg_bulkload - Total duration: 14m42s - Times executed: 25 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-02-27 13:54:42 Duration: 6m55s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-02-27 14:25:51 Duration: 5m20s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-02-26 14:02:25 Duration: 4m20s Bind query: yes
14 45m58s 1 45m58s 45m58s 45m58s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Feb 27 13 1 45m58s 45m58s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2025-02-27 13:42:47 Duration: 45m58s Bind query: yes
15 40m30s 421 1s3ms 20s5ms 5s772ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Feb 23 00 1 4s501ms 4s501ms 01 1 1s572ms 1s572ms 02 3 26s256ms 8s752ms 03 3 33s117ms 11s39ms 04 5 13s657ms 2s731ms 05 4 13s813ms 3s453ms 06 3 31s448ms 10s482ms 07 3 37s377ms 12s459ms 08 4 9s562ms 2s390ms 09 5 16s647ms 3s329ms 10 3 29s937ms 9s979ms 11 4 12s294ms 3s73ms 12 2 4s835ms 2s417ms 13 2 7s913ms 3s956ms 16 1 1s43ms 1s43ms 18 1 2s483ms 2s483ms 19 1 10s606ms 10s606ms 20 3 18s855ms 6s285ms 21 3 14s638ms 4s879ms 22 2 6s615ms 3s307ms 23 2 2s605ms 1s302ms Feb 24 00 3 20s90ms 6s696ms 01 5 45s333ms 9s66ms 02 5 24s814ms 4s962ms 03 3 10s209ms 3s403ms 06 2 6s432ms 3s216ms 08 2 21s551ms 10s775ms 09 3 17s753ms 5s917ms 10 1 1s11ms 1s11ms 11 2 33s915ms 16s957ms 12 3 13s226ms 4s408ms 13 2 9s375ms 4s687ms 14 3 8s110ms 2s703ms 15 1 5s289ms 5s289ms 16 2 16s931ms 8s465ms 17 3 11s130ms 3s710ms 18 4 11s903ms 2s975ms 19 3 36s95ms 12s31ms 20 5 13s334ms 2s666ms 21 2 21s513ms 10s756ms 22 1 15s691ms 15s691ms 23 7 25s262ms 3s608ms Feb 25 00 3 19s88ms 6s362ms 01 3 5s614ms 1s871ms 02 5 11s39ms 2s207ms 03 1 4s160ms 4s160ms 04 4 14s230ms 3s557ms 05 10 1m30s 9s48ms 06 4 26s469ms 6s617ms 07 3 20s633ms 6s877ms 08 5 33s763ms 6s752ms 09 10 1m13s 7s376ms 10 5 54s491ms 10s898ms 11 4 34s654ms 8s663ms 12 8 52s244ms 6s530ms 13 5 12s416ms 2s483ms 14 4 30s971ms 7s742ms 15 2 2s395ms 1s197ms 16 8 49s266ms 6s158ms 17 5 45s789ms 9s157ms 18 1 1s761ms 1s761ms 19 5 20s354ms 4s70ms 20 12 52s862ms 4s405ms 21 4 32s738ms 8s184ms 22 4 15s210ms 3s802ms 23 6 22s523ms 3s753ms Feb 26 00 6 27s960ms 4s660ms 01 2 32s838ms 16s419ms 02 4 36s647ms 9s161ms 05 2 18s683ms 9s341ms 06 6 20s910ms 3s485ms 07 4 11s432ms 2s858ms 08 6 29s962ms 4s993ms 09 2 5s902ms 2s951ms 10 3 3s491ms 1s163ms 11 10 59s241ms 5s924ms 12 6 46s24ms 7s670ms 13 4 12s875ms 3s218ms 14 4 6s101ms 1s525ms 15 3 7s68ms 2s356ms 16 1 15s895ms 15s895ms Feb 27 02 3 14s492ms 4s830ms 04 1 1s176ms 1s176ms 07 1 1s164ms 1s164ms 08 1 1s906ms 1s906ms 11 1 16s118ms 16s118ms 12 1 5s542ms 5s542ms 13 2 4s332ms 2s166ms 14 2 18s785ms 9s392ms 15 2 33s565ms 16s782ms 17 5 43s198ms 8s639ms 18 2 17s396ms 8s698ms 19 1 2s419ms 2s419ms 20 1 16s809ms 16s809ms 22 1 2s895ms 2s895ms 23 4 38s497ms 9s624ms Feb 28 00 1 1s30ms 1s30ms 01 1 3s480ms 3s480ms 02 2 4s602ms 2s301ms 03 2 17s469ms 8s734ms 04 2 4s916ms 2s458ms 05 2 5s628ms 2s814ms 06 1 1s49ms 1s49ms 07 5 30s179ms 6s35ms 08 1 5s844ms 5s844ms 09 7 21s804ms 3s114ms 10 3 28s328ms 9s442ms 11 1 1s89ms 1s89ms 12 2 2s172ms 1s86ms 13 2 19s614ms 9s807ms 14 1 16s51ms 16s51ms 16 4 37s219ms 9s304ms 17 1 1s167ms 1s167ms 18 5 39s222ms 7s844ms 19 2 5s629ms 2s814ms 20 1 2s941ms 2s941ms 21 5 25s82ms 5s16ms 22 2 18s621ms 9s310ms 23 3 20s598ms 6s866ms Mar 01 00 4 21s373ms 5s343ms 02 1 1s18ms 1s18ms 03 4 21s171ms 5s292ms 04 1 1s44ms 1s44ms 06 3 13s500ms 4s500ms 07 1 2s480ms 2s480ms 08 2 10s852ms 5s426ms 09 3 18s179ms 6s59ms 12 2 6s657ms 3s328ms 14 3 6s460ms 2s153ms 15 3 14s760ms 4s920ms 16 1 1s29ms 1s29ms 19 2 3s228ms 1s614ms 20 1 16s199ms 16s199ms 21 1 16s267ms 16s267ms 22 3 13s250ms 4s416ms [ User: pubeu - Total duration: 8m45s - Times executed: 94 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-28 10:15:02 Duration: 20s5ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-27 17:36:31 Duration: 19s698ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-27 23:35:44 Duration: 17s878ms Database: ctdprd51 User: pubeu Bind query: yes
16 39m23s 68 4s217ms 34m25s 34s754ms select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Feb 28 11 9 35m 3m53s 12 59 4m22s 4s453ms [ User: qaeu - Total duration: 34m25s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-02-28 11:57:37 Duration: 34m25s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-02-28 12:04:18 Duration: 6s146ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-02-28 12:17:38 Duration: 5s651ms Bind query: yes
17 38m4s 542 1s3ms 50s68ms 4s214ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where (d.id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Feb 23 06 273 19m1s 4s180ms 07 25 1m37s 3s902ms 20 243 17m19s 4s276ms Feb 27 16 1 6s186ms 6s186ms [ User: pubeu - Total duration: 5m30s - Times executed: 83 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2082652) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 06:40:42 Duration: 50s68ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'chemical and drug induced liver injury' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2082652) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 20:32:01 Duration: 49s428ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d007674' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2091673) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 06:50:19 Duration: 23s780ms Bind query: yes
18 36m50s 69 1s957ms 3m32s 32s34ms select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Feb 23 03 2 2m9s 1m4s 10 1 1m11s 1m11s 16 1 2s772ms 2s772ms 23 4 1m25s 21s291ms Feb 24 02 2 4s346ms 2s173ms 05 1 32s357ms 32s357ms 14 1 1m23s 1m23s 15 1 37s816ms 37s816ms Feb 25 04 1 1m2s 1m2s 08 1 40s800ms 40s800ms 11 1 2s275ms 2s275ms 14 1 2s561ms 2s561ms Feb 26 07 1 2s823ms 2s823ms 21 1 2s634ms 2s634ms Feb 27 03 1 2s937ms 2s937ms 08 1 3m19s 3m19s 11 2 1m4s 32s373ms 18 1 2s248ms 2s248ms 19 1 1m28s 1m28s 20 1 41s494ms 41s494ms 22 1 2s170ms 2s170ms Feb 28 01 1 2s178ms 2s178ms 03 1 2s107ms 2s107ms 04 1 38s38ms 38s38ms 06 3 52s657ms 17s552ms 10 2 1m34s 47s145ms 11 1 2s301ms 2s301ms 12 1 31s692ms 31s692ms 14 1 1m27s 1m27s 16 1 36s581ms 36s581ms 17 4 4m12s 1m3s 18 2 1m2s 31s109ms 19 4 1m34s 23s552ms 20 1 2s209ms 2s209ms 21 2 34s814ms 17s407ms 23 1 2s434ms 2s434ms Mar 01 01 1 29s412ms 29s412ms 04 1 2s739ms 2s739ms 05 1 34s231ms 34s231ms 06 1 2s56ms 2s56ms 12 2 4s426ms 2s213ms 13 1 1s965ms 1s965ms 17 1 1s957ms 1s957ms 18 1 2s778ms 2s778ms 19 1 1s970ms 1s970ms 20 1 2s347ms 2s347ms 22 5 6m9s 1m13s [ User: pubeu - Total duration: 10m53s - Times executed: 18 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1254019')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-03-01 22:23:42 Duration: 3m32s Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1343984')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-02-27 08:36:18 Duration: 3m19s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1276726')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-02-27 19:41:16 Duration: 1m28s Database: ctdprd51 User: pubeu Bind query: yes
19 36m43s 1,474 1s451ms 2s666ms 1s494ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Feb 23 00 13 19s390ms 1s491ms 01 16 23s719ms 1s482ms 02 10 14s881ms 1s488ms 03 16 23s980ms 1s498ms 04 11 16s449ms 1s495ms 05 18 26s885ms 1s493ms 06 12 17s896ms 1s491ms 07 5 7s434ms 1s486ms 08 19 28s552ms 1s502ms 09 9 13s319ms 1s479ms 10 17 25s328ms 1s489ms 11 4 6s31ms 1s507ms 12 10 14s868ms 1s486ms 13 6 9s3ms 1s500ms 14 6 8s895ms 1s482ms 15 1 1s482ms 1s482ms 17 2 3s1ms 1s500ms 18 3 4s391ms 1s463ms 19 2 2s937ms 1s468ms 20 3 4s420ms 1s473ms 21 5 7s605ms 1s521ms 22 8 11s838ms 1s479ms 23 9 13s649ms 1s516ms Feb 24 00 8 11s944ms 1s493ms 01 8 11s766ms 1s470ms 02 9 13s373ms 1s485ms 03 3 4s442ms 1s480ms 04 10 14s871ms 1s487ms 05 7 10s407ms 1s486ms 06 4 5s934ms 1s483ms 07 4 5s977ms 1s494ms 08 6 8s950ms 1s491ms 09 4 5s932ms 1s483ms 10 7 10s472ms 1s496ms 11 6 8s844ms 1s474ms 12 4 5s895ms 1s473ms 13 5 7s492ms 1s498ms 14 8 11s878ms 1s484ms 15 8 11s859ms 1s482ms 16 5 7s417ms 1s483ms 17 4 5s970ms 1s492ms 18 21 31s63ms 1s479ms 19 30 44s731ms 1s491ms 20 31 45s897ms 1s480ms 21 34 50s563ms 1s487ms 22 39 58s220ms 1s492ms 23 37 54s948ms 1s485ms Feb 25 00 37 55s204ms 1s492ms 01 41 1m1s 1s490ms 02 41 1m 1s476ms 03 43 1m3s 1s482ms 04 40 59s635ms 1s490ms 05 45 1m7s 1s490ms 06 43 1m4s 1s491ms 07 47 1m9s 1s489ms 08 40 1m 1s512ms 09 38 56s778ms 1s494ms 10 47 1m10s 1s500ms 11 39 58s191ms 1s492ms 12 30 44s759ms 1s491ms 13 26 38s868ms 1s494ms 14 15 22s329ms 1s488ms 15 22 32s680ms 1s485ms 16 9 13s380ms 1s486ms 17 16 23s800ms 1s487ms 18 24 35s734ms 1s488ms 19 19 28s323ms 1s490ms 20 19 28s425ms 1s496ms 21 26 38s737ms 1s489ms 22 18 26s739ms 1s485ms 23 13 19s516ms 1s501ms Feb 26 00 15 22s340ms 1s489ms 01 16 23s866ms 1s491ms 02 4 6s 1s500ms 05 10 14s902ms 1s490ms 06 20 30s57ms 1s502ms 07 16 23s894ms 1s493ms 08 15 23s400ms 1s560ms 09 18 27s434ms 1s524ms 10 13 19s585ms 1s506ms 11 12 18s167ms 1s513ms 12 17 25s712ms 1s512ms 13 12 18s149ms 1s512ms 14 16 24s109ms 1s506ms 15 9 13s466ms 1s496ms 16 2 3s34ms 1s517ms 21 2 3s3ms 1s501ms Feb 27 01 1 1s498ms 1s498ms 03 1 1s511ms 1s511ms 05 2 3s39ms 1s519ms 06 1 1s504ms 1s504ms 07 1 1s483ms 1s483ms 10 1 1s491ms 1s491ms 12 1 1s483ms 1s483ms 13 1 1s500ms 1s500ms 14 1 1s519ms 1s519ms 17 1 2s666ms 2s666ms 20 2 3s457ms 1s728ms 23 1 1s638ms 1s638ms Feb 28 00 1 1s532ms 1s532ms 05 2 3s6ms 1s503ms 07 1 1s507ms 1s507ms 08 1 1s518ms 1s518ms 10 1 1s548ms 1s548ms 11 2 3s616ms 1s808ms 13 2 3s51ms 1s525ms 16 1 1s506ms 1s506ms 17 1 1s481ms 1s481ms Mar 01 05 2 2s949ms 1s474ms 06 1 1s536ms 1s536ms 09 1 1s459ms 1s459ms 10 1 1s466ms 1s466ms 17 1 1s486ms 1s486ms [ User: pubeu - Total duration: 7m26s - Times executed: 297 ]
[ User: qaeu - Total duration: 1s507ms - Times executed: 1 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-02-27 17:26:45 Duration: 2s666ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-02-25 08:42:29 Duration: 2s249ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-02-28 11:25:49 Duration: 2s102ms Bind query: yes
20 35m28s 486 1s 7s284ms 4s380ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Feb 23 00 2 6s203ms 3s101ms 01 2 6s92ms 3s46ms 02 2 10s681ms 5s340ms 03 1 5s377ms 5s377ms 04 2 2s14ms 1s7ms 07 4 20s461ms 5s115ms 09 5 17s363ms 3s472ms 10 3 15s286ms 5s95ms 11 2 10s603ms 5s301ms 12 1 4s702ms 4s702ms 14 5 24s67ms 4s813ms 15 1 5s382ms 5s382ms 18 1 4s938ms 4s938ms 19 1 4s680ms 4s680ms 20 2 2s172ms 1s86ms 21 2 9s627ms 4s813ms 22 4 11s899ms 2s974ms 23 10 44s711ms 4s471ms Feb 24 00 6 34s993ms 5s832ms 02 2 9s416ms 4s708ms 04 1 4s719ms 4s719ms 06 1 5s214ms 5s214ms 07 1 5s371ms 5s371ms 08 4 11s637ms 2s909ms 10 2 6s220ms 3s110ms 11 1 4s802ms 4s802ms 12 1 4s850ms 4s850ms 13 7 36s931ms 5s275ms 14 1 4s887ms 4s887ms 15 1 5s14ms 5s14ms 17 9 40s736ms 4s526ms 19 1 5s357ms 5s357ms 20 2 9s921ms 4s960ms 21 1 5s284ms 5s284ms 22 1 4s730ms 4s730ms 23 5 23s844ms 4s768ms Feb 25 00 7 27s601ms 3s943ms 02 1 5s446ms 5s446ms 03 2 6s617ms 3s308ms 04 2 10s565ms 5s282ms 05 3 12s452ms 4s150ms 06 1 4s944ms 4s944ms 07 2 10s502ms 5s251ms 08 2 10s917ms 5s458ms 10 4 16s246ms 4s61ms 11 4 8s254ms 2s63ms 12 2 6s857ms 3s428ms 13 3 11s484ms 3s828ms 14 3 15s803ms 5s267ms 15 2 10s264ms 5s132ms 17 2 6s415ms 3s207ms 18 8 46s710ms 5s838ms 19 3 11s664ms 3s888ms 20 1 1s26ms 1s26ms 21 2 6s941ms 3s470ms 22 3 11s662ms 3s887ms 23 4 16s966ms 4s241ms Feb 26 00 2 9s890ms 4s945ms 01 9 34s798ms 3s866ms 05 1 5s44ms 5s44ms 07 3 11s853ms 3s951ms 08 1 6s961ms 6s961ms 09 1 7s249ms 7s249ms 10 2 12s344ms 6s172ms 11 5 19s617ms 3s923ms 12 1 5s725ms 5s725ms 13 1 6s585ms 6s585ms 14 1 6s674ms 6s674ms 15 1 5s364ms 5s364ms 17 1 1s76ms 1s76ms 19 1 5s867ms 5s867ms 20 2 12s112ms 6s56ms 23 10 42s736ms 4s273ms Feb 27 00 1 1s68ms 1s68ms 01 1 1s89ms 1s89ms 02 3 17s2ms 5s667ms 03 2 7s248ms 3s624ms 04 1 5s10ms 5s10ms 06 1 5s896ms 5s896ms 07 1 6s200ms 6s200ms 08 1 1s68ms 1s68ms 11 5 13s810ms 2s762ms 12 10 33s889ms 3s388ms 13 5 17s391ms 3s478ms 14 2 6s961ms 3s480ms 15 4 24s584ms 6s146ms 16 3 17s189ms 5s729ms 17 3 15s828ms 5s276ms 18 3 11s707ms 3s902ms 19 1 5s233ms 5s233ms 20 3 13s409ms 4s469ms 21 5 19s965ms 3s993ms 22 9 42s306ms 4s700ms 23 8 36s148ms 4s518ms Feb 28 00 7 37s103ms 5s300ms 01 6 22s2ms 3s667ms 02 3 11s377ms 3s792ms 03 2 10s752ms 5s376ms 04 2 10s475ms 5s237ms 05 12 45s656ms 3s804ms 06 5 23s588ms 4s717ms 07 4 16s469ms 4s117ms 08 2 10s271ms 5s135ms 09 3 11s511ms 3s837ms 10 3 11s442ms 3s814ms 11 6 29s81ms 4s846ms 12 3 16s119ms 5s373ms 13 5 18s617ms 3s723ms 14 4 17s11ms 4s252ms 15 4 21s212ms 5s303ms 16 3 7s177ms 2s392ms 17 11 45s705ms 4s155ms 18 10 43s62ms 4s306ms 19 9 29s841ms 3s315ms 20 1 5s748ms 5s748ms 21 2 10s680ms 5s340ms 22 2 10s484ms 5s242ms 23 5 21s623ms 4s324ms Mar 01 00 9 46s392ms 5s154ms 01 2 6s542ms 3s271ms 02 5 13s330ms 2s666ms 03 1 5s185ms 5s185ms 04 5 26s408ms 5s281ms 06 2 10s479ms 5s239ms 07 3 15s445ms 5s148ms 08 11 49s71ms 4s461ms 09 8 38s334ms 4s791ms 10 3 15s537ms 5s179ms 11 1 1s7ms 1s7ms 12 5 24s600ms 4s920ms 13 2 9s345ms 4s672ms 14 2 9s709ms 4s854ms 15 3 14s320ms 4s773ms 16 3 15s252ms 5s84ms 17 7 22s141ms 3s163ms 18 2 9s605ms 4s802ms 19 1 5s275ms 5s275ms 20 3 12s96ms 4s32ms 21 6 21s387ms 3s564ms 22 13 1m9s 5s328ms 23 3 14s484ms 4s828ms [ User: pubeu - Total duration: 8m31s - Times executed: 108 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1286983' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-03-01 22:16:34 Duration: 7s284ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1316410' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-02-26 09:06:30 Duration: 7s249ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1442752' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-02-27 15:55:30 Duration: 7s63ms Database: ctdprd51 User: pubeu Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 4,511 1h31m9s 1s93ms 2s545ms 1s212ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Feb 23 00 30 35s684ms 1s189ms 01 50 58s966ms 1s179ms 02 37 44s297ms 1s197ms 03 27 32s425ms 1s200ms 04 30 35s944ms 1s198ms 05 24 28s867ms 1s202ms 06 18 21s689ms 1s204ms 07 23 27s414ms 1s191ms 08 14 17s240ms 1s231ms 09 26 31s283ms 1s203ms 10 34 40s207ms 1s182ms 11 14 16s652ms 1s189ms 12 23 27s462ms 1s194ms 13 20 23s756ms 1s187ms 14 18 21s666ms 1s203ms 15 25 29s226ms 1s169ms 16 34 40s185ms 1s181ms 17 11 12s902ms 1s172ms 18 16 18s428ms 1s151ms 19 20 22s693ms 1s134ms 20 22 26s123ms 1s187ms 21 15 17s577ms 1s171ms 22 27 31s871ms 1s180ms 23 25 29s680ms 1s187ms Feb 24 00 28 34s440ms 1s230ms 01 31 36s674ms 1s183ms 02 15 17s946ms 1s196ms 03 10 11s818ms 1s181ms 04 15 17s564ms 1s170ms 05 24 28s523ms 1s188ms 06 12 14s368ms 1s197ms 07 14 16s628ms 1s187ms 08 31 36s597ms 1s180ms 09 10 11s880ms 1s188ms 10 11 12s921ms 1s174ms 11 18 21s318ms 1s184ms 12 12 14s131ms 1s177ms 13 22 25s941ms 1s179ms 14 19 21s905ms 1s152ms 15 24 27s782ms 1s157ms 16 20 23s272ms 1s163ms 17 8 9s306ms 1s163ms 18 38 44s425ms 1s169ms 19 18 20s907ms 1s161ms 20 23 26s927ms 1s170ms 21 29 34s189ms 1s178ms 22 25 29s290ms 1s171ms 23 36 42s851ms 1s190ms Feb 25 00 29 34s792ms 1s199ms 01 38 45s280ms 1s191ms 02 41 48s527ms 1s183ms 03 48 57s443ms 1s196ms 04 29 34s488ms 1s189ms 05 38 45s921ms 1s208ms 06 35 41s808ms 1s194ms 07 39 46s416ms 1s190ms 08 27 32s451ms 1s201ms 09 32 38s760ms 1s211ms 10 46 54s95ms 1s175ms 11 28 32s843ms 1s172ms 12 32 37s394ms 1s168ms 13 32 37s644ms 1s176ms 14 43 49s828ms 1s158ms 15 38 44s461ms 1s170ms 16 50 58s624ms 1s172ms 17 28 33s159ms 1s184ms 18 50 58s693ms 1s173ms 19 46 54s177ms 1s177ms 20 37 43s483ms 1s175ms 21 30 35s260ms 1s175ms 22 39 46s970ms 1s204ms 23 37 45s536ms 1s230ms Feb 26 00 38 46s331ms 1s219ms 01 35 42s153ms 1s204ms 02 9 11s26ms 1s225ms 05 27 32s967ms 1s221ms 06 32 39s314ms 1s228ms 07 24 28s705ms 1s196ms 08 21 27s404ms 1s304ms 09 26 32s602ms 1s253ms 10 39 51s437ms 1s318ms 11 33 40s984ms 1s241ms 12 45 54s938ms 1s220ms 13 25 32s7ms 1s280ms 14 39 49s390ms 1s266ms 15 15 18s801ms 1s253ms 16 10 13s751ms 1s375ms 17 9 11s38ms 1s226ms 18 25 30s807ms 1s232ms 19 5 6s535ms 1s307ms 20 22 29s470ms 1s339ms 21 9 12s636ms 1s404ms 22 19 23s381ms 1s230ms 23 16 20s698ms 1s293ms Feb 27 00 17 20s963ms 1s233ms 01 22 27s250ms 1s238ms 02 17 21s922ms 1s289ms 03 22 27s92ms 1s231ms 04 13 16s336ms 1s256ms 05 19 23s313ms 1s227ms 06 8 10s858ms 1s357ms 07 18 21s905ms 1s216ms 08 17 24s221ms 1s424ms 09 6 7s196ms 1s199ms 10 27 33s239ms 1s231ms 11 17 20s765ms 1s221ms 12 18 21s585ms 1s199ms 13 30 36s867ms 1s228ms 14 29 35s205ms 1s213ms 15 25 31s395ms 1s255ms 16 31 38s431ms 1s239ms 17 16 19s577ms 1s223ms 18 19 21s927ms 1s154ms 19 32 38s402ms 1s200ms 20 25 31s10ms 1s240ms 21 22 27s757ms 1s261ms 22 27 33s186ms 1s229ms 23 89 1m53s 1s274ms Feb 28 00 44 54s81ms 1s229ms 01 28 33s712ms 1s204ms 02 32 39s787ms 1s243ms 03 37 45s441ms 1s228ms 04 77 1m33s 1s217ms 05 85 1m42s 1s208ms 06 67 1m23s 1s246ms 07 20 24s171ms 1s208ms 08 30 35s429ms 1s180ms 09 18 21s215ms 1s178ms 10 20 23s712ms 1s185ms 11 25 30s99ms 1s203ms 12 14 16s907ms 1s207ms 13 16 20s547ms 1s284ms 14 24 28s915ms 1s204ms 15 28 33s728ms 1s204ms 16 28 33s948ms 1s212ms 17 22 27s159ms 1s234ms 18 28 35s229ms 1s258ms 19 28 33s858ms 1s209ms 20 23 27s914ms 1s213ms 21 23 27s851ms 1s210ms 22 31 37s749ms 1s217ms 23 15 18s88ms 1s205ms Mar 01 00 28 34s4ms 1s214ms 01 27 32s573ms 1s206ms 02 19 22s785ms 1s199ms 03 39 47s828ms 1s226ms 04 23 28s465ms 1s237ms 05 33 40s141ms 1s216ms 06 26 31s612ms 1s215ms 07 29 35s123ms 1s211ms 08 23 27s682ms 1s203ms 09 21 26s158ms 1s245ms 10 31 37s595ms 1s212ms 11 33 39s698ms 1s202ms 12 22 26s521ms 1s205ms 13 20 23s840ms 1s192ms 14 12 14s461ms 1s205ms 15 22 26s390ms 1s199ms 16 20 24s125ms 1s206ms 17 19 22s701ms 1s194ms 18 36 43s443ms 1s206ms 19 28 33s269ms 1s188ms 20 28 32s607ms 1s164ms 21 30 35s57ms 1s168ms 22 113 2m30s 1s334ms 23 9 10s895ms 1s210ms [ User: pubeu - Total duration: 23m8s - Times executed: 1128 ]
[ User: qaeu - Total duration: 1s305ms - Times executed: 1 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1538806' or receptorTerm.id = '1538806' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:16:59 Duration: 2s545ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1461036' or receptorTerm.id = '1461036' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:06:44 Duration: 2s516ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2068838' or receptorTerm.id = '2068838' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:16:58 Duration: 2s496ms Database: ctdprd51 User: pubeu Bind query: yes
2 2,108 1h50m35s 1s1ms 7s78ms 3s147ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Feb 23 00 23 57s73ms 2s481ms 01 14 45s692ms 3s263ms 02 38 2m1s 3s188ms 03 19 53s885ms 2s836ms 04 27 1m18s 2s923ms 05 16 54s386ms 3s399ms 06 21 1m2s 2s968ms 07 11 30s618ms 2s783ms 08 19 48s611ms 2s558ms 09 21 1m4s 3s56ms 10 31 1m39s 3s214ms 11 20 1m6s 3s301ms 12 14 49s124ms 3s508ms 13 9 21s391ms 2s376ms 14 13 47s890ms 3s683ms 15 8 29s399ms 3s674ms 16 2 12s876ms 6s438ms 17 2 4s929ms 2s464ms 18 4 7s740ms 1s935ms 19 2 9s224ms 4s612ms 20 9 24s595ms 2s732ms 21 12 43s943ms 3s661ms 22 17 51s687ms 3s40ms 23 19 59s704ms 3s142ms Feb 24 00 11 28s64ms 2s551ms 01 15 44s324ms 2s954ms 02 7 17s72ms 2s438ms 03 5 12s370ms 2s474ms 04 7 16s503ms 2s357ms 05 8 17s248ms 2s156ms 06 3 10s295ms 3s431ms 07 4 10s202ms 2s550ms 08 8 27s142ms 3s392ms 09 8 27s941ms 3s492ms 10 8 31s629ms 3s953ms 11 14 49s219ms 3s515ms 12 12 29s561ms 2s463ms 13 9 29s413ms 3s268ms 14 17 53s593ms 3s152ms 15 8 26s174ms 3s271ms 16 9 34s954ms 3s883ms 17 4 9s785ms 2s446ms 18 11 24s33ms 2s184ms 19 11 40s371ms 3s670ms 20 23 1m3s 2s773ms 21 23 1m10s 3s57ms 22 12 40s843ms 3s403ms 23 20 48s245ms 2s412ms Feb 25 00 25 1m32s 3s712ms 01 23 1m20s 3s491ms 02 21 54s792ms 2s609ms 03 30 1m29s 2s979ms 04 31 1m50s 3s579ms 05 28 1m32s 3s315ms 06 20 1m 3s30ms 07 16 43s652ms 2s728ms 08 15 47s387ms 3s159ms 09 41 1m59s 2s912ms 10 23 1m7s 2s936ms 11 18 58s438ms 3s246ms 12 35 1m53s 3s230ms 13 36 1m40s 2s797ms 14 18 1m3s 3s537ms 15 18 54s677ms 3s37ms 16 23 1m5s 2s844ms 17 35 1m57s 3s351ms 18 33 1m48s 3s288ms 19 27 1m41s 3s773ms 20 33 2m5s 3s801ms 21 23 1m5s 2s866ms 22 28 1m46s 3s818ms 23 29 1m45s 3s651ms Feb 26 00 25 1m4s 2s599ms 01 34 1m44s 3s82ms 02 10 36s840ms 3s684ms 05 17 55s901ms 3s288ms 06 23 1m16s 3s322ms 07 25 1m20s 3s229ms 08 18 55s727ms 3s95ms 09 39 2m2s 3s140ms 10 20 1m3s 3s196ms 11 29 1m36s 3s317ms 12 32 1m48s 3s379ms 13 32 1m42s 3s217ms 14 17 51s83ms 3s4ms 15 12 32s944ms 2s745ms 17 1 1s944ms 1s944ms 18 3 11s84ms 3s694ms 19 2 3s946ms 1s973ms 20 2 7s956ms 3s978ms 21 1 3s76ms 3s76ms 23 9 27s528ms 3s58ms Feb 27 00 3 6s981ms 2s327ms 02 2 8s163ms 4s81ms 03 4 14s110ms 3s527ms 05 1 1s837ms 1s837ms 06 1 1s923ms 1s923ms 08 1 6s496ms 6s496ms 09 1 2s59ms 2s59ms 11 5 12s618ms 2s523ms 12 3 19s281ms 6s427ms 13 8 20s499ms 2s562ms 14 9 26s658ms 2s962ms 15 8 21s184ms 2s648ms 16 5 10s132ms 2s26ms 17 4 18s48ms 4s512ms 18 10 34s770ms 3s477ms 19 9 31s455ms 3s495ms 20 11 26s412ms 2s401ms 21 3 9s978ms 3s326ms 22 13 45s45ms 3s465ms 23 15 43s119ms 2s874ms Feb 28 00 14 30s843ms 2s203ms 01 5 16s612ms 3s322ms 02 9 24s625ms 2s736ms 03 13 43s911ms 3s377ms 04 3 11s484ms 3s828ms 05 10 37s376ms 3s737ms 06 6 12s192ms 2s32ms 07 5 14s987ms 2s997ms 08 6 15s886ms 2s647ms 09 8 29s860ms 3s732ms 10 7 19s344ms 2s763ms 11 5 24s780ms 4s956ms 12 7 19s598ms 2s799ms 13 11 25s461ms 2s314ms 14 11 28s926ms 2s629ms 15 11 35s71ms 3s188ms 16 3 15s364ms 5s121ms 17 5 20s953ms 4s190ms 18 20 1m13s 3s671ms 19 7 23s45ms 3s292ms 20 8 32s449ms 4s56ms 21 13 35s164ms 2s704ms 22 7 19s361ms 2s765ms 23 7 28s396ms 4s56ms Mar 01 00 9 30s357ms 3s373ms 01 9 29s943ms 3s327ms 02 8 38s685ms 4s835ms 03 5 14s673ms 2s934ms 04 6 15s12ms 2s502ms 05 6 15s8ms 2s501ms 06 7 20s397ms 2s913ms 07 7 16s795ms 2s399ms 08 9 23s623ms 2s624ms 09 12 32s477ms 2s706ms 10 6 11s460ms 1s910ms 11 6 15s531ms 2s588ms 12 3 14s409ms 4s803ms 13 9 25s413ms 2s823ms 14 7 27s44ms 3s863ms 15 10 39s259ms 3s925ms 16 10 34s484ms 3s448ms 17 8 23s126ms 2s890ms 18 6 26s942ms 4s490ms 19 7 17s672ms 2s524ms 20 8 22s677ms 2s834ms 21 8 22s199ms 2s774ms 22 10 38s455ms 3s845ms 23 7 15s692ms 2s241ms [ User: pubeu - Total duration: 24m57s - Times executed: 467 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-26 09:06:17 Duration: 7s78ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-28 20:39:31 Duration: 7s20ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-26 08:51:14 Duration: 7s11ms Bind query: yes
3 2,070 1h27m48s 1s 5s319ms 2s545ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Feb 23 00 23 59s662ms 2s594ms 01 26 1m17s 2s984ms 02 18 55s227ms 3s68ms 03 24 1m6s 2s755ms 04 27 1m2s 2s326ms 05 25 1m7s 2s687ms 06 16 47s404ms 2s962ms 07 13 29s456ms 2s265ms 08 16 39s875ms 2s492ms 09 13 30s632ms 2s356ms 10 25 1m6s 2s645ms 11 12 27s605ms 2s300ms 12 10 25s238ms 2s523ms 13 6 18s887ms 3s147ms 14 13 33s629ms 2s586ms 15 7 24s103ms 3s443ms 16 5 14s132ms 2s826ms 17 2 7s535ms 3s767ms 18 5 9s496ms 1s899ms 19 6 19s68ms 3s178ms 20 11 23s914ms 2s174ms 21 14 36s661ms 2s618ms 22 11 36s727ms 3s338ms 23 23 1m 2s610ms Feb 24 00 9 23s946ms 2s660ms 01 11 28s963ms 2s633ms 02 8 10s427ms 1s303ms 03 8 17s327ms 2s165ms 04 10 25s632ms 2s563ms 05 9 27s152ms 3s16ms 06 5 14s386ms 2s877ms 07 4 13s523ms 3s380ms 08 8 20s262ms 2s532ms 09 5 12s249ms 2s449ms 10 12 29s270ms 2s439ms 11 9 23s157ms 2s573ms 12 11 29s327ms 2s666ms 13 10 20s863ms 2s86ms 14 9 18s600ms 2s66ms 15 4 7s45ms 1s761ms 16 7 17s336ms 2s476ms 17 6 12s725ms 2s120ms 18 9 18s965ms 2s107ms 19 5 16s93ms 3s218ms 20 8 21s66ms 2s633ms 21 17 53s917ms 3s171ms 22 14 47s968ms 3s426ms 23 18 44s704ms 2s483ms Feb 25 00 27 1m17s 2s880ms 01 27 1m1s 2s290ms 02 18 53s891ms 2s993ms 03 30 1m8s 2s269ms 04 30 1m36s 3s200ms 05 26 1m12s 2s805ms 06 19 53s768ms 2s829ms 07 23 1m2s 2s729ms 08 19 54s380ms 2s862ms 09 26 1m2s 2s393ms 10 32 1m31s 2s860ms 11 17 40s420ms 2s377ms 12 24 56s193ms 2s341ms 13 20 44s284ms 2s214ms 14 25 1m13s 2s951ms 15 27 1m18s 2s897ms 16 34 1m32s 2s730ms 17 15 40s735ms 2s715ms 18 25 1m1s 2s466ms 19 26 1m5s 2s513ms 20 21 45s30ms 2s144ms 21 29 58s117ms 2s4ms 22 18 34s267ms 1s903ms 23 26 1m18s 3s29ms Feb 26 00 22 44s877ms 2s39ms 01 36 1m13s 2s49ms 02 7 22s273ms 3s181ms 03 1 1s363ms 1s363ms 05 14 31s615ms 2s258ms 06 30 1m20s 2s692ms 07 14 34s969ms 2s497ms 08 19 47s920ms 2s522ms 09 36 1m35s 2s646ms 10 19 45s48ms 2s370ms 11 13 33s126ms 2s548ms 12 22 44s759ms 2s34ms 13 21 1m3s 3s17ms 14 17 42s534ms 2s502ms 15 8 22s238ms 2s779ms 16 5 15s731ms 3s146ms 17 4 9s578ms 2s394ms 18 2 4s152ms 2s76ms 19 1 1s45ms 1s45ms 21 3 6s132ms 2s44ms 22 2 7s125ms 3s562ms 23 10 21s419ms 2s141ms Feb 27 00 1 1s213ms 1s213ms 01 1 1s215ms 1s215ms 02 3 5s692ms 1s897ms 03 1 4s335ms 4s335ms 04 2 8s732ms 4s366ms 05 2 6s161ms 3s80ms 06 1 1s259ms 1s259ms 07 1 4s665ms 4s665ms 08 2 6s55ms 3s27ms 09 1 3s446ms 3s446ms 11 8 15s485ms 1s935ms 12 10 24s198ms 2s419ms 13 7 19s800ms 2s828ms 14 14 32s419ms 2s315ms 15 5 15s648ms 3s129ms 16 13 29s123ms 2s240ms 17 4 9s568ms 2s392ms 18 6 12s776ms 2s129ms 19 16 37s46ms 2s315ms 20 23 50s385ms 2s190ms 21 9 23s466ms 2s607ms 22 20 47s277ms 2s363ms 23 15 46s284ms 3s85ms Feb 28 00 7 10s648ms 1s521ms 01 10 30s55ms 3s5ms 02 6 11s888ms 1s981ms 03 8 13s511ms 1s688ms 04 12 25s921ms 2s160ms 05 13 36s874ms 2s836ms 06 8 18s145ms 2s268ms 07 6 16s251ms 2s708ms 08 4 10s194ms 2s548ms 09 10 31s782ms 3s178ms 10 5 16s302ms 3s260ms 11 11 30s948ms 2s813ms 12 8 22s455ms 2s806ms 13 5 11s392ms 2s278ms 14 18 49s18ms 2s723ms 15 10 21s426ms 2s142ms 16 7 23s47ms 3s292ms 17 11 30s88ms 2s735ms 18 16 38s370ms 2s398ms 19 8 22s823ms 2s852ms 20 10 27s170ms 2s717ms 21 11 17s517ms 1s592ms 22 6 10s280ms 1s713ms 23 9 16s28ms 1s780ms Mar 01 00 13 35s431ms 2s725ms 01 16 46s353ms 2s897ms 02 10 19s969ms 1s996ms 03 7 15s552ms 2s221ms 04 9 24s102ms 2s678ms 05 10 26s333ms 2s633ms 06 15 27s319ms 1s821ms 07 5 11s790ms 2s358ms 08 10 22s161ms 2s216ms 09 13 26s966ms 2s74ms 10 7 15s522ms 2s217ms 11 9 21s237ms 2s359ms 12 10 25s245ms 2s524ms 13 9 20s772ms 2s308ms 14 4 11s387ms 2s846ms 15 9 24s228ms 2s692ms 16 17 37s277ms 2s192ms 17 14 45s825ms 3s273ms 18 4 7s146ms 1s786ms 19 5 7s344ms 1s468ms 20 7 14s856ms 2s122ms 21 12 29s31ms 2s419ms 22 5 8s776ms 1s755ms 23 9 27s224ms 3s24ms [ User: pubeu - Total duration: 21m20s - Times executed: 513 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-02-26 08:52:49 Duration: 5s319ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-02-26 06:29:18 Duration: 5s66ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1399342') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-02-26 09:06:06 Duration: 5s17ms Database: ctdprd51 User: pubeu Bind query: yes
4 1,474 36m43s 1s451ms 2s666ms 1s494ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Feb 23 00 13 19s390ms 1s491ms 01 16 23s719ms 1s482ms 02 10 14s881ms 1s488ms 03 16 23s980ms 1s498ms 04 11 16s449ms 1s495ms 05 18 26s885ms 1s493ms 06 12 17s896ms 1s491ms 07 5 7s434ms 1s486ms 08 19 28s552ms 1s502ms 09 9 13s319ms 1s479ms 10 17 25s328ms 1s489ms 11 4 6s31ms 1s507ms 12 10 14s868ms 1s486ms 13 6 9s3ms 1s500ms 14 6 8s895ms 1s482ms 15 1 1s482ms 1s482ms 17 2 3s1ms 1s500ms 18 3 4s391ms 1s463ms 19 2 2s937ms 1s468ms 20 3 4s420ms 1s473ms 21 5 7s605ms 1s521ms 22 8 11s838ms 1s479ms 23 9 13s649ms 1s516ms Feb 24 00 8 11s944ms 1s493ms 01 8 11s766ms 1s470ms 02 9 13s373ms 1s485ms 03 3 4s442ms 1s480ms 04 10 14s871ms 1s487ms 05 7 10s407ms 1s486ms 06 4 5s934ms 1s483ms 07 4 5s977ms 1s494ms 08 6 8s950ms 1s491ms 09 4 5s932ms 1s483ms 10 7 10s472ms 1s496ms 11 6 8s844ms 1s474ms 12 4 5s895ms 1s473ms 13 5 7s492ms 1s498ms 14 8 11s878ms 1s484ms 15 8 11s859ms 1s482ms 16 5 7s417ms 1s483ms 17 4 5s970ms 1s492ms 18 21 31s63ms 1s479ms 19 30 44s731ms 1s491ms 20 31 45s897ms 1s480ms 21 34 50s563ms 1s487ms 22 39 58s220ms 1s492ms 23 37 54s948ms 1s485ms Feb 25 00 37 55s204ms 1s492ms 01 41 1m1s 1s490ms 02 41 1m 1s476ms 03 43 1m3s 1s482ms 04 40 59s635ms 1s490ms 05 45 1m7s 1s490ms 06 43 1m4s 1s491ms 07 47 1m9s 1s489ms 08 40 1m 1s512ms 09 38 56s778ms 1s494ms 10 47 1m10s 1s500ms 11 39 58s191ms 1s492ms 12 30 44s759ms 1s491ms 13 26 38s868ms 1s494ms 14 15 22s329ms 1s488ms 15 22 32s680ms 1s485ms 16 9 13s380ms 1s486ms 17 16 23s800ms 1s487ms 18 24 35s734ms 1s488ms 19 19 28s323ms 1s490ms 20 19 28s425ms 1s496ms 21 26 38s737ms 1s489ms 22 18 26s739ms 1s485ms 23 13 19s516ms 1s501ms Feb 26 00 15 22s340ms 1s489ms 01 16 23s866ms 1s491ms 02 4 6s 1s500ms 05 10 14s902ms 1s490ms 06 20 30s57ms 1s502ms 07 16 23s894ms 1s493ms 08 15 23s400ms 1s560ms 09 18 27s434ms 1s524ms 10 13 19s585ms 1s506ms 11 12 18s167ms 1s513ms 12 17 25s712ms 1s512ms 13 12 18s149ms 1s512ms 14 16 24s109ms 1s506ms 15 9 13s466ms 1s496ms 16 2 3s34ms 1s517ms 21 2 3s3ms 1s501ms Feb 27 01 1 1s498ms 1s498ms 03 1 1s511ms 1s511ms 05 2 3s39ms 1s519ms 06 1 1s504ms 1s504ms 07 1 1s483ms 1s483ms 10 1 1s491ms 1s491ms 12 1 1s483ms 1s483ms 13 1 1s500ms 1s500ms 14 1 1s519ms 1s519ms 17 1 2s666ms 2s666ms 20 2 3s457ms 1s728ms 23 1 1s638ms 1s638ms Feb 28 00 1 1s532ms 1s532ms 05 2 3s6ms 1s503ms 07 1 1s507ms 1s507ms 08 1 1s518ms 1s518ms 10 1 1s548ms 1s548ms 11 2 3s616ms 1s808ms 13 2 3s51ms 1s525ms 16 1 1s506ms 1s506ms 17 1 1s481ms 1s481ms Mar 01 05 2 2s949ms 1s474ms 06 1 1s536ms 1s536ms 09 1 1s459ms 1s459ms 10 1 1s466ms 1s466ms 17 1 1s486ms 1s486ms [ User: pubeu - Total duration: 7m26s - Times executed: 297 ]
[ User: qaeu - Total duration: 1s507ms - Times executed: 1 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-02-27 17:26:45 Duration: 2s666ms Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-02-25 08:42:29 Duration: 2s249ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-02-28 11:25:49 Duration: 2s102ms Bind query: yes
5 984 54m18s 1s4ms 12s518ms 3s311ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Feb 23 00 3 7s360ms 2s453ms 01 2 3s585ms 1s792ms 02 5 9s266ms 1s853ms 03 6 17s896ms 2s982ms 04 1 5s234ms 5s234ms 05 6 21s921ms 3s653ms 06 2 3s169ms 1s584ms 07 3 5s393ms 1s797ms 08 3 6s266ms 2s88ms 09 4 10s126ms 2s531ms 10 5 22s230ms 4s446ms 11 2 7s838ms 3s919ms 13 2 7s386ms 3s693ms 14 3 11s772ms 3s924ms 15 2 13s928ms 6s964ms 16 1 1s301ms 1s301ms 17 1 2s403ms 2s403ms 19 1 1s178ms 1s178ms 20 1 2s396ms 2s396ms 21 9 26s768ms 2s974ms 22 2 5s121ms 2s560ms 23 9 30s225ms 3s358ms Feb 24 00 9 24s827ms 2s758ms 02 3 5s388ms 1s796ms 03 3 6s151ms 2s50ms 06 1 6s111ms 6s111ms 07 2 4s94ms 2s47ms 08 1 2s459ms 2s459ms 09 2 3s728ms 1s864ms 10 2 8s53ms 4s26ms 11 3 13s942ms 4s647ms 12 7 23s469ms 3s352ms 13 4 10s933ms 2s733ms 14 2 6s426ms 3s213ms 15 2 2s691ms 1s345ms 16 2 8s691ms 4s345ms 17 9 29s873ms 3s319ms 18 4 21s25ms 5s256ms 19 3 10s222ms 3s407ms 20 4 8s341ms 2s85ms 21 5 10s493ms 2s98ms 22 4 13s611ms 3s402ms 23 4 14s464ms 3s616ms Feb 25 00 5 23s750ms 4s750ms 01 3 5s408ms 1s802ms 02 2 4s758ms 2s379ms 03 3 7s572ms 2s524ms 04 4 10s684ms 2s671ms 05 4 8s94ms 2s23ms 06 1 1s42ms 1s42ms 07 2 3s830ms 1s915ms 08 17 54s62ms 3s180ms 09 5 15s289ms 3s57ms 10 4 6s137ms 1s534ms 11 2 4s477ms 2s238ms 12 2 5s568ms 2s784ms 13 3 12s708ms 4s236ms 14 2 5s680ms 2s840ms 15 2 7s89ms 3s544ms 16 2 6s404ms 3s202ms 17 5 24s365ms 4s873ms 18 13 39s265ms 3s20ms 19 4 7s480ms 1s870ms 20 6 18s879ms 3s146ms 21 20 58s335ms 2s916ms 22 7 25s618ms 3s659ms 23 5 9s852ms 1s970ms Feb 26 00 4 17s30ms 4s257ms 01 3 14s685ms 4s895ms 02 3 8s488ms 2s829ms 05 5 14s679ms 2s935ms 06 7 14s299ms 2s42ms 07 8 16s294ms 2s36ms 08 15 40s717ms 2s714ms 09 4 10s16ms 2s504ms 10 8 20s350ms 2s543ms 11 7 21s274ms 3s39ms 12 9 27s448ms 3s49ms 13 5 14s895ms 2s979ms 14 2 7s402ms 3s701ms 15 12 1m 5s61ms 17 3 7s949ms 2s649ms 18 2 8s99ms 4s49ms 19 3 11s677ms 3s892ms 20 2 4s316ms 2s158ms 21 3 10s533ms 3s511ms 22 3 10s959ms 3s653ms 23 4 7s613ms 1s903ms Feb 27 00 5 22s282ms 4s456ms 01 3 5s420ms 1s806ms 02 11 34s730ms 3s157ms 03 7 22s577ms 3s225ms 04 4 14s518ms 3s629ms 05 1 1s160ms 1s160ms 06 6 15s362ms 2s560ms 07 3 6s78ms 2s26ms 08 1 1s255ms 1s255ms 09 1 2s503ms 2s503ms 10 3 3s833ms 1s277ms 11 9 30s943ms 3s438ms 12 7 29s161ms 4s165ms 13 4 11s615ms 2s903ms 14 8 15s952ms 1s994ms 15 15 59s502ms 3s966ms 16 16 39s756ms 2s484ms 17 4 16s429ms 4s107ms 18 16 1m6s 4s126ms 19 9 26s761ms 2s973ms 20 7 22s326ms 3s189ms 21 7 29s688ms 4s241ms 22 9 36s309ms 4s34ms 23 8 26s644ms 3s330ms Feb 28 00 4 10s898ms 2s724ms 01 6 26s413ms 4s402ms 02 9 46s579ms 5s175ms 03 11 35s779ms 3s252ms 04 9 32s507ms 3s611ms 05 10 39s77ms 3s907ms 06 5 13s669ms 2s733ms 07 11 34s18ms 3s92ms 08 8 25s112ms 3s139ms 09 7 17s198ms 2s456ms 10 12 43s853ms 3s654ms 11 13 49s715ms 3s824ms 12 7 21s712ms 3s101ms 13 10 26s59ms 2s605ms 14 8 22s221ms 2s777ms 15 6 31s282ms 5s213ms 16 4 12s543ms 3s135ms 17 15 1m7s 4s495ms 18 7 28s203ms 4s29ms 19 7 26s811ms 3s830ms 20 10 25s629ms 2s562ms 21 3 7s961ms 2s653ms 22 7 21s16ms 3s2ms 23 8 35s526ms 4s440ms Mar 01 00 10 37s830ms 3s783ms 01 14 48s561ms 3s468ms 02 12 42s552ms 3s546ms 03 7 16s168ms 2s309ms 04 9 38s258ms 4s250ms 05 13 57s25ms 4s386ms 06 11 36s835ms 3s348ms 07 11 41s137ms 3s739ms 08 7 25s825ms 3s689ms 09 7 14s424ms 2s60ms 10 9 30s729ms 3s414ms 11 11 34s344ms 3s122ms 12 10 35s797ms 3s579ms 13 6 14s850ms 2s475ms 14 10 33s25ms 3s302ms 15 6 22s892ms 3s815ms 16 12 48s934ms 4s77ms 17 10 45s446ms 4s544ms 18 9 32s937ms 3s659ms 19 9 30s144ms 3s349ms 20 11 42s412ms 3s855ms 21 5 12s599ms 2s519ms 22 18 50s216ms 2s789ms 23 12 49s780ms 4s148ms [ User: pubeu - Total duration: 15m31s - Times executed: 299 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-02-26 15:12:10 Duration: 12s518ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2091965') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-03-01 04:50:41 Duration: 12s88ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2091965') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-02-28 18:33:16 Duration: 11s756ms Bind query: yes
6 748 20m31s 1s244ms 2s270ms 1s646ms select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Feb 23 00 16 27s105ms 1s694ms 01 9 13s870ms 1s541ms 02 6 8s999ms 1s499ms 03 9 16s253ms 1s805ms 04 5 7s623ms 1s524ms 05 10 17s702ms 1s770ms 06 7 10s917ms 1s559ms 07 4 7s554ms 1s888ms 08 7 12s496ms 1s785ms 09 11 17s19ms 1s547ms 10 7 9s597ms 1s371ms 11 3 4s977ms 1s659ms 12 8 12s674ms 1s584ms 13 4 6s336ms 1s584ms 14 3 4s983ms 1s661ms 16 2 3s149ms 1s574ms 19 2 2s571ms 1s285ms 20 1 1s902ms 1s902ms 21 6 9s375ms 1s562ms 22 1 1s843ms 1s843ms 23 4 6s340ms 1s585ms Feb 24 00 2 3s287ms 1s643ms 01 9 14s960ms 1s662ms 02 4 6s868ms 1s717ms 03 2 3s155ms 1s577ms 04 6 9s404ms 1s567ms 05 6 9s935ms 1s655ms 06 2 3s108ms 1s554ms 07 5 6s929ms 1s385ms 08 3 4s390ms 1s463ms 09 3 4s481ms 1s493ms 10 3 5s37ms 1s679ms 11 1 1s286ms 1s286ms 12 4 6s856ms 1s714ms 13 1 1s863ms 1s863ms 14 7 12s992ms 1s856ms 15 5 7s514ms 1s502ms 16 4 7s497ms 1s874ms 17 2 3s175ms 1s587ms 18 6 8s294ms 1s382ms 19 4 6s820ms 1s705ms 20 6 10s652ms 1s775ms 21 4 6s876ms 1s719ms 22 4 6s901ms 1s725ms 23 3 4s408ms 1s469ms Feb 25 00 6 9s446ms 1s574ms 01 7 11s855ms 1s693ms 02 11 16s981ms 1s543ms 03 13 20s50ms 1s542ms 04 14 21s478ms 1s534ms 05 6 7s748ms 1s291ms 06 6 9s485ms 1s580ms 07 14 21s994ms 1s571ms 08 12 20s989ms 1s749ms 09 8 13s701ms 1s712ms 10 11 17s87ms 1s553ms 11 5 8s99ms 1s619ms 12 11 17s712ms 1s610ms 13 4 6s276ms 1s569ms 14 10 15s765ms 1s576ms 15 12 18s270ms 1s522ms 16 15 25s598ms 1s706ms 17 9 15s558ms 1s728ms 18 15 23s874ms 1s591ms 19 11 18s684ms 1s698ms 20 6 8s232ms 1s372ms 21 10 18s528ms 1s852ms 22 12 20s310ms 1s692ms 23 13 22s245ms 1s711ms Feb 26 00 10 16s437ms 1s643ms 01 12 18s554ms 1s546ms 02 4 6s82ms 1s520ms 05 6 10s135ms 1s689ms 06 14 23s849ms 1s703ms 07 7 12s220ms 1s745ms 08 12 19s621ms 1s635ms 09 9 15s400ms 1s711ms 10 5 8s244ms 1s648ms 11 11 19s118ms 1s738ms 12 7 10s462ms 1s494ms 13 7 12s249ms 1s749ms 14 9 13s676ms 1s519ms 15 2 3s244ms 1s622ms 16 1 1s312ms 1s312ms 17 2 3s76ms 1s538ms 18 2 3s869ms 1s934ms 19 4 6s986ms 1s746ms 21 1 1s936ms 1s936ms 22 1 1s912ms 1s912ms 23 3 5s701ms 1s900ms Feb 27 00 1 1s968ms 1s968ms 06 1 1s291ms 1s291ms 11 2 2s538ms 1s269ms 12 3 5s657ms 1s885ms 13 3 5s769ms 1s923ms 14 3 5s173ms 1s724ms 15 4 7s522ms 1s880ms 16 2 3s562ms 1s781ms 17 1 1s855ms 1s855ms 18 2 2s580ms 1s290ms 19 3 5s133ms 1s711ms 20 3 5s281ms 1s760ms 21 3 5s649ms 1s883ms 22 2 3s747ms 1s873ms 23 1 1s957ms 1s957ms Feb 28 00 2 3s740ms 1s870ms 01 2 3s761ms 1s880ms 02 2 3s677ms 1s838ms 03 2 2s596ms 1s298ms 04 7 12s564ms 1s794ms 05 5 8s750ms 1s750ms 06 1 1s909ms 1s909ms 07 3 5s54ms 1s684ms 08 2 3s152ms 1s576ms 09 2 3s264ms 1s632ms 10 1 1s351ms 1s351ms 11 1 1s297ms 1s297ms 12 3 4s512ms 1s504ms 14 2 3s145ms 1s572ms 15 2 3s772ms 1s886ms 16 5 8s173ms 1s634ms 17 3 5s171ms 1s723ms 18 6 10s661ms 1s776ms 19 1 1s843ms 1s843ms 20 5 7s792ms 1s558ms 21 2 3s155ms 1s577ms 22 3 5s34ms 1s678ms 23 1 1s868ms 1s868ms Mar 01 00 3 4s451ms 1s483ms 01 7 11s406ms 1s629ms 02 1 1s844ms 1s844ms 03 2 3s721ms 1s860ms 04 3 5s611ms 1s870ms 05 1 1s837ms 1s837ms 06 5 7s615ms 1s523ms 07 4 6s413ms 1s603ms 08 3 4s442ms 1s480ms 09 2 3s149ms 1s574ms 10 4 6s970ms 1s742ms 12 1 1s877ms 1s877ms 13 2 3s753ms 1s876ms 15 3 5s631ms 1s877ms 16 2 3s161ms 1s580ms 17 2 3s803ms 1s901ms 18 1 1s867ms 1s867ms 19 4 6s944ms 1s736ms 20 2 3s737ms 1s868ms 21 3 5s278ms 1s759ms 22 2 3s788ms 1s894ms 23 3 4s419ms 1s473ms [ User: pubeu - Total duration: 5m14s - Times executed: 186 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-02-27 15:53:10 Duration: 2s270ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-02-27 16:08:02 Duration: 2s212ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-02-26 02:18:51 Duration: 2s155ms Database: ctdprd51 User: pubeu Bind query: yes
7 624 14m9s 1s168ms 2s749ms 1s361ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Feb 23 00 1 1s264ms 1s264ms 01 4 5s35ms 1s258ms 02 3 3s896ms 1s298ms 03 2 2s904ms 1s452ms 04 1 1s273ms 1s273ms 05 3 4s240ms 1s413ms 06 3 3s865ms 1s288ms 08 8 10s784ms 1s348ms 09 1 1s319ms 1s319ms 10 1 1s367ms 1s367ms 11 1 1s286ms 1s286ms 12 2 2s974ms 1s487ms 13 3 3s969ms 1s323ms 15 2 2s574ms 1s287ms 20 1 1s279ms 1s279ms 23 1 1s376ms 1s376ms Feb 24 00 4 5s363ms 1s340ms 01 2 2s654ms 1s327ms 02 4 5s170ms 1s292ms 03 1 1s390ms 1s390ms 04 1 1s312ms 1s312ms 05 4 5s401ms 1s350ms 06 4 4s930ms 1s232ms 07 1 1s299ms 1s299ms 08 2 2s887ms 1s443ms 10 4 5s198ms 1s299ms 12 1 1s263ms 1s263ms 14 2 2s555ms 1s277ms 15 2 2s586ms 1s293ms 16 2 2s630ms 1s315ms 17 3 4s501ms 1s500ms 19 3 3s872ms 1s290ms 20 6 7s965ms 1s327ms 21 5 6s315ms 1s263ms 22 2 2s636ms 1s318ms 23 4 5s36ms 1s259ms Feb 25 00 1 1s293ms 1s293ms 01 3 4s32ms 1s344ms 02 5 6s571ms 1s314ms 03 3 3s928ms 1s309ms 04 1 1s315ms 1s315ms 05 9 12s88ms 1s343ms 08 7 9s461ms 1s351ms 09 4 5s372ms 1s343ms 10 5 6s973ms 1s394ms 11 1 1s307ms 1s307ms 12 3 3s773ms 1s257ms 13 2 2s560ms 1s280ms 14 1 1s301ms 1s301ms 16 6 7s577ms 1s262ms 17 3 3s983ms 1s327ms 18 7 8s827ms 1s261ms 19 11 14s359ms 1s305ms 20 4 5s235ms 1s308ms 21 17 21s385ms 1s257ms 22 5 6s599ms 1s319ms 23 2 2s583ms 1s291ms Feb 26 01 2 2s446ms 1s223ms 02 1 1s320ms 1s320ms 05 6 8s98ms 1s349ms 06 3 3s876ms 1s292ms 07 1 1s394ms 1s394ms 08 3 4s47ms 1s349ms 10 9 13s192ms 1s465ms 12 5 6s758ms 1s351ms 13 2 2s678ms 1s339ms 14 3 3s966ms 1s322ms 15 4 6s797ms 1s699ms 16 1 1s771ms 1s771ms 17 3 4s7ms 1s335ms 19 2 2s736ms 1s368ms 20 1 1s246ms 1s246ms 21 1 1s327ms 1s327ms 22 2 2s683ms 1s341ms Feb 27 00 7 9s572ms 1s367ms 01 4 5s950ms 1s487ms 02 5 7s121ms 1s424ms 03 2 2s957ms 1s478ms 04 3 4s189ms 1s396ms 05 4 5s464ms 1s366ms 06 2 2s673ms 1s336ms 07 4 5s863ms 1s465ms 08 4 7s467ms 1s866ms 09 1 1s296ms 1s296ms 10 4 5s496ms 1s374ms 11 2 2s705ms 1s352ms 12 8 10s677ms 1s334ms 13 3 4s162ms 1s387ms 14 3 4s88ms 1s362ms 15 2 2s813ms 1s406ms 16 4 5s738ms 1s434ms 17 2 2s870ms 1s435ms 18 2 2s570ms 1s285ms 19 10 14s100ms 1s410ms 20 8 10s820ms 1s352ms 21 6 8s489ms 1s414ms 22 4 5s361ms 1s340ms 23 31 42s903ms 1s383ms Feb 28 00 12 16s180ms 1s348ms 01 2 2s633ms 1s316ms 02 8 10s914ms 1s364ms 03 6 8s264ms 1s377ms 04 14 18s750ms 1s339ms 05 22 29s763ms 1s352ms 06 8 10s590ms 1s323ms 07 6 8s187ms 1s364ms 08 5 6s544ms 1s308ms 09 2 2s573ms 1s286ms 10 5 6s753ms 1s350ms 11 6 8s245ms 1s374ms 12 3 3s909ms 1s303ms 13 5 7s400ms 1s480ms 14 2 2s743ms 1s371ms 15 2 2s827ms 1s413ms 16 3 4s121ms 1s373ms 17 3 4s764ms 1s588ms 18 7 9s607ms 1s372ms 19 4 5s245ms 1s311ms 20 2 2s565ms 1s282ms 21 6 8s144ms 1s357ms 22 5 6s696ms 1s339ms 23 2 2s568ms 1s284ms Mar 01 00 1 1s320ms 1s320ms 01 5 6s633ms 1s326ms 02 8 11s10ms 1s376ms 03 4 5s275ms 1s318ms 04 3 4s19ms 1s339ms 05 6 8s613ms 1s435ms 06 5 7s392ms 1s478ms 07 7 9s265ms 1s323ms 08 4 5s280ms 1s320ms 10 6 8s100ms 1s350ms 11 7 9s108ms 1s301ms 12 2 2s710ms 1s355ms 13 3 4s186ms 1s395ms 14 3 4s246ms 1s415ms 15 10 13s686ms 1s368ms 16 5 6s828ms 1s365ms 17 2 2s565ms 1s282ms 18 2 2s620ms 1s310ms 19 6 7s850ms 1s308ms 20 3 3s834ms 1s278ms 21 4 5s102ms 1s275ms 22 19 29s703ms 1s563ms 23 1 1s350ms 1s350ms [ User: pubeu - Total duration: 3m35s - Times executed: 154 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081391') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2081391') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-02-26 15:12:02 Duration: 2s749ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2092728') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2092728') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:17:03 Duration: 2s630ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2082610') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2082610') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:17:00 Duration: 2s627ms Database: ctdprd51 User: pubeu Bind query: yes
8 611 26m57s 1s 6s770ms 2s647ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Feb 23 00 3 9s259ms 3s86ms 01 5 12s105ms 2s421ms 02 3 10s896ms 3s632ms 03 4 7s501ms 1s875ms 04 3 5s322ms 1s774ms 05 9 26s404ms 2s933ms 06 10 23s199ms 2s319ms 07 6 13s520ms 2s253ms 08 1 2s560ms 2s560ms 09 8 17s529ms 2s191ms 10 2 8s512ms 4s256ms 11 4 10s522ms 2s630ms 12 5 11s708ms 2s341ms 13 4 11s772ms 2s943ms 14 1 5s721ms 5s721ms 15 2 5s13ms 2s506ms 19 2 3s989ms 1s994ms 20 2 4s950ms 2s475ms 21 3 11s382ms 3s794ms 23 3 6s21ms 2s7ms Feb 24 00 4 9s178ms 2s294ms 01 2 6s180ms 3s90ms 02 1 1s272ms 1s272ms 03 2 5s458ms 2s729ms 04 2 4s276ms 2s138ms 05 2 4s846ms 2s423ms 06 2 3s686ms 1s843ms 07 2 5s503ms 2s751ms 08 4 14s815ms 3s703ms 09 3 10s246ms 3s415ms 11 3 7s8ms 2s336ms 12 4 12s519ms 3s129ms 13 2 2s514ms 1s257ms 14 1 1s610ms 1s610ms 15 2 7s841ms 3s920ms 16 2 4s292ms 2s146ms 17 5 14s814ms 2s962ms 18 5 16s62ms 3s212ms 19 3 7s811ms 2s603ms 20 9 21s412ms 2s379ms 21 4 9s351ms 2s337ms 22 5 11s150ms 2s230ms 23 8 21s371ms 2s671ms Feb 25 00 5 14s959ms 2s991ms 01 9 24s144ms 2s682ms 02 7 14s312ms 2s44ms 03 14 42s226ms 3s16ms 04 13 36s2ms 2s769ms 05 11 31s878ms 2s898ms 06 12 33s426ms 2s785ms 07 10 28s641ms 2s864ms 08 6 17s694ms 2s949ms 09 9 29s516ms 3s279ms 10 8 29s158ms 3s644ms 11 11 22s117ms 2s10ms 12 14 31s778ms 2s269ms 13 8 21s668ms 2s708ms 14 7 15s299ms 2s185ms 15 8 21s248ms 2s656ms 16 11 29s328ms 2s666ms 17 12 42s668ms 3s555ms 18 4 9s314ms 2s328ms 19 14 47s64ms 3s361ms 20 10 31s517ms 3s151ms 21 10 20s24ms 2s2ms 22 16 51s379ms 3s211ms 23 11 35s31ms 3s184ms Feb 26 00 9 23s482ms 2s609ms 01 5 12s775ms 2s555ms 02 6 14s19ms 2s336ms 05 2 4s941ms 2s470ms 06 14 34s50ms 2s432ms 07 6 17s662ms 2s943ms 08 9 20s131ms 2s236ms 09 7 23s79ms 3s297ms 10 12 27s610ms 2s300ms 11 6 14s746ms 2s457ms 12 15 39s630ms 2s642ms 13 10 28s415ms 2s841ms 14 12 31s849ms 2s654ms 15 3 7s446ms 2s482ms 21 1 1s194ms 1s194ms 22 1 1s42ms 1s42ms 23 2 2s745ms 1s372ms Feb 27 01 1 2s341ms 2s341ms 02 1 1s110ms 1s110ms 09 1 6s357ms 6s357ms 11 3 5s586ms 1s862ms 13 3 9s873ms 3s291ms 14 3 5s843ms 1s947ms 15 4 7s498ms 1s874ms 16 1 1s776ms 1s776ms 17 1 2s240ms 2s240ms 18 1 1s568ms 1s568ms 21 2 3s71ms 1s535ms 22 1 2s226ms 2s226ms 23 3 8s901ms 2s967ms Feb 28 01 2 3s784ms 1s892ms 02 1 1s737ms 1s737ms 03 1 2s77ms 2s77ms 04 1 2s221ms 2s221ms 05 5 14s911ms 2s982ms 06 3 5s697ms 1s899ms 07 1 1s103ms 1s103ms 09 2 3s372ms 1s686ms 10 1 1s498ms 1s498ms 11 2 3s342ms 1s671ms 12 2 8s119ms 4s59ms 13 1 2s127ms 2s127ms 15 5 14s13ms 2s802ms 17 1 2s76ms 2s76ms 18 3 9s303ms 3s101ms 19 2 3s146ms 1s573ms 21 1 1s752ms 1s752ms 22 2 4s341ms 2s170ms 23 1 1s469ms 1s469ms Mar 01 00 2 3s444ms 1s722ms 01 2 7s627ms 3s813ms 03 2 3s710ms 1s855ms 04 2 4s262ms 2s131ms 05 1 2s159ms 2s159ms 06 1 2s214ms 2s214ms 09 1 2s110ms 2s110ms 11 2 8s25ms 4s12ms 12 1 5s919ms 5s919ms 13 2 4s303ms 2s151ms 14 1 2s119ms 2s119ms 16 2 7s159ms 3s579ms 17 1 1s309ms 1s309ms 19 2 7s207ms 3s603ms 20 1 1s597ms 1s597ms 21 3 3s516ms 1s172ms 22 6 10s176ms 1s696ms [ User: pubeu - Total duration: 6m19s - Times executed: 145 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '655185' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '655185') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-02-28 12:28:03 Duration: 6s770ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '655185' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '655185') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-02-26 09:02:18 Duration: 6s646ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '655185' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '655185') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-02-27 13:13:39 Duration: 6s370ms Database: ctdprd51 User: pubeu Bind query: yes
9 596 13m6s 1s175ms 3s376ms 1s320ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Feb 23 00 7 8s920ms 1s274ms 01 7 9s366ms 1s338ms 02 8 10s570ms 1s321ms 03 8 10s413ms 1s301ms 04 1 1s290ms 1s290ms 05 5 6s724ms 1s344ms 06 3 3s923ms 1s307ms 07 2 2s505ms 1s252ms 08 1 1s365ms 1s365ms 09 4 5s64ms 1s266ms 10 4 5s189ms 1s297ms 11 3 3s718ms 1s239ms 13 2 2s604ms 1s302ms 14 1 1s306ms 1s306ms 15 7 8s903ms 1s271ms 16 7 9s33ms 1s290ms 17 1 1s203ms 1s203ms 18 5 6s284ms 1s256ms 19 6 7s301ms 1s216ms 20 3 3s724ms 1s241ms 21 2 2s482ms 1s241ms 22 3 3s818ms 1s272ms 23 4 5s329ms 1s332ms Feb 24 00 9 11s443ms 1s271ms 01 6 7s493ms 1s248ms 02 3 3s886ms 1s295ms 03 4 5s78ms 1s269ms 04 1 1s229ms 1s229ms 05 6 7s929ms 1s321ms 06 3 3s828ms 1s276ms 07 3 3s824ms 1s274ms 09 3 3s756ms 1s252ms 10 1 1s308ms 1s308ms 11 3 3s892ms 1s297ms 12 2 2s562ms 1s281ms 13 6 7s728ms 1s288ms 14 6 7s288ms 1s214ms 15 3 3s758ms 1s252ms 16 3 3s717ms 1s239ms 17 1 1s281ms 1s281ms 18 4 4s927ms 1s231ms 19 3 3s748ms 1s249ms 20 4 5s122ms 1s280ms 21 3 3s768ms 1s256ms 22 1 1s300ms 1s300ms 23 6 7s575ms 1s262ms Feb 25 00 5 6s563ms 1s312ms 01 4 5s341ms 1s335ms 02 5 6s371ms 1s274ms 03 5 6s424ms 1s284ms 04 2 2s804ms 1s402ms 05 8 10s713ms 1s339ms 07 2 2s526ms 1s263ms 08 6 8s57ms 1s342ms 09 1 1s419ms 1s419ms 10 2 2s710ms 1s355ms 11 1 1s204ms 1s204ms 13 1 1s295ms 1s295ms 14 7 8s879ms 1s268ms 15 1 1s217ms 1s217ms 16 4 5s255ms 1s313ms 17 4 5s57ms 1s264ms 18 10 12s946ms 1s294ms 19 6 7s610ms 1s268ms 20 3 3s774ms 1s258ms 21 2 2s571ms 1s285ms 22 2 2s619ms 1s309ms 23 4 5s111ms 1s277ms Feb 26 00 3 4s502ms 1s500ms 01 1 1s277ms 1s277ms 05 8 10s583ms 1s322ms 06 4 5s146ms 1s286ms 07 1 1s308ms 1s308ms 10 4 6s124ms 1s531ms 11 9 12s634ms 1s403ms 12 4 5s271ms 1s317ms 13 2 2s613ms 1s306ms 14 3 3s884ms 1s294ms 15 4 5s316ms 1s329ms 17 1 1s258ms 1s258ms 18 2 2s561ms 1s280ms 19 3 4s189ms 1s396ms 20 2 2s750ms 1s375ms 21 2 2s987ms 1s493ms 22 4 5s548ms 1s387ms Feb 27 00 5 6s689ms 1s337ms 01 2 2s813ms 1s406ms 02 8 11s47ms 1s380ms 03 7 9s195ms 1s313ms 04 3 4s111ms 1s370ms 05 7 9s445ms 1s349ms 06 4 5s192ms 1s298ms 07 1 1s371ms 1s371ms 08 4 5s863ms 1s465ms 09 5 6s445ms 1s289ms 10 2 2s858ms 1s429ms 11 2 2s551ms 1s275ms 13 3 4s124ms 1s374ms 14 4 5s312ms 1s328ms 15 4 7s196ms 1s799ms 16 2 2s605ms 1s302ms 17 4 5s166ms 1s291ms 18 1 1s334ms 1s334ms 19 2 2s563ms 1s281ms 20 2 2s741ms 1s370ms 21 4 5s580ms 1s395ms 22 2 4s560ms 2s280ms 23 2 2s652ms 1s326ms Feb 28 00 2 2s732ms 1s366ms 01 3 4s70ms 1s356ms 02 3 3s971ms 1s323ms 03 5 6s452ms 1s290ms 04 3 4s22ms 1s340ms 05 5 6s692ms 1s338ms 06 4 5s342ms 1s335ms 07 4 5s237ms 1s309ms 08 5 6s625ms 1s325ms 09 5 6s324ms 1s264ms 10 2 2s680ms 1s340ms 11 7 9s270ms 1s324ms 12 1 1s234ms 1s234ms 13 3 4s385ms 1s461ms 14 8 10s617ms 1s327ms 15 3 3s871ms 1s290ms 16 9 11s899ms 1s322ms 17 3 4s194ms 1s398ms 18 4 5s230ms 1s307ms 19 8 10s454ms 1s306ms 20 5 6s638ms 1s327ms 21 5 6s407ms 1s281ms 22 3 3s752ms 1s250ms 23 1 1s248ms 1s248ms Mar 01 00 6 7s778ms 1s296ms 01 3 3s848ms 1s282ms 03 5 6s389ms 1s277ms 04 1 1s356ms 1s356ms 05 3 4s91ms 1s363ms 06 7 9s73ms 1s296ms 07 5 6s513ms 1s302ms 08 1 1s241ms 1s241ms 09 2 2s667ms 1s333ms 10 6 7s908ms 1s318ms 11 2 2s659ms 1s329ms 12 2 2s559ms 1s279ms 13 2 2s533ms 1s266ms 14 2 2s545ms 1s272ms 15 7 9s179ms 1s311ms 16 3 3s929ms 1s309ms 17 6 7s727ms 1s287ms 18 5 6s537ms 1s307ms 19 4 5s68ms 1s267ms 20 2 2s404ms 1s202ms 21 3 3s808ms 1s269ms 22 17 24s790ms 1s458ms 23 1 1s442ms 1s442ms [ User: pubeu - Total duration: 3m10s - Times executed: 143 ]
[ User: qaeu - Total duration: 8s349ms - Times executed: 6 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1222080') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1222080') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-02-27 15:38:13 Duration: 3s376ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1222080') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1222080') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-02-27 22:49:15 Duration: 3s249ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1217951') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1217951') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-03-01 22:16:56 Duration: 2s722ms Database: ctdprd51 User: pubeu Bind query: yes
10 576 1h4m2s 1s11ms 28s141ms 6s671ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Feb 23 00 7 47s431ms 6s775ms 01 3 35s828ms 11s942ms 02 7 33s613ms 4s801ms 03 4 26s873ms 6s718ms 04 2 24s858ms 12s429ms 05 3 13s291ms 4s430ms 06 6 20s659ms 3s443ms 07 2 5s784ms 2s892ms 08 8 1m43s 12s954ms 09 5 36s48ms 7s209ms 10 4 11s398ms 2s849ms 11 2 6s105ms 3s52ms 12 2 38s54ms 19s27ms 13 4 35s567ms 8s891ms 14 1 3s905ms 3s905ms 15 2 11s282ms 5s641ms 16 1 3s816ms 3s816ms 17 1 1s905ms 1s905ms 20 2 22s745ms 11s372ms 21 4 18s960ms 4s740ms 22 1 11s284ms 11s284ms 23 6 16s696ms 2s782ms Feb 24 00 3 35s423ms 11s807ms 01 3 57s550ms 19s183ms 02 3 22s466ms 7s488ms 03 1 3s422ms 3s422ms 04 2 4s861ms 2s430ms 05 1 3s933ms 3s933ms 06 1 1s642ms 1s642ms 07 3 22s403ms 7s467ms 08 2 2s859ms 1s429ms 09 1 1s418ms 1s418ms 10 2 23s496ms 11s748ms 11 4 28s795ms 7s198ms 13 3 4s265ms 1s421ms 14 3 5s206ms 1s735ms 15 2 4s617ms 2s308ms 16 4 43s498ms 10s874ms 17 2 30s981ms 15s490ms 18 3 36s159ms 12s53ms 20 2 21s464ms 10s732ms 21 4 32s28ms 8s7ms 22 5 12s874ms 2s574ms 23 3 6s235ms 2s78ms Feb 25 00 4 8s88ms 2s22ms 01 12 1m27s 7s284ms 02 6 49s589ms 8s264ms 03 7 34s820ms 4s974ms 04 10 20s238ms 2s23ms 05 7 1m12s 10s346ms 06 5 29s 5s800ms 07 4 14s444ms 3s611ms 08 11 1m2s 5s697ms 09 5 15s568ms 3s113ms 10 6 31s725ms 5s287ms 11 7 21s367ms 3s52ms 12 2 24s574ms 12s287ms 13 7 50s601ms 7s228ms 14 9 47s691ms 5s299ms 15 5 10s143ms 2s28ms 16 8 1m26s 10s789ms 17 3 6s286ms 2s95ms 18 4 28s308ms 7s77ms 19 8 15s985ms 1s998ms 20 9 48s276ms 5s364ms 21 8 50s767ms 6s345ms 22 7 52s954ms 7s564ms 23 14 1m32s 6s631ms Feb 26 00 11 45s711ms 4s155ms 01 6 59s175ms 9s862ms 02 5 29s904ms 5s980ms 03 1 24s16ms 24s16ms 05 2 11s441ms 5s720ms 06 5 10s143ms 2s28ms 07 3 5s982ms 1s994ms 08 7 53s974ms 7s710ms 09 7 51s699ms 7s385ms 10 7 14s834ms 2s119ms 11 3 4s825ms 1s608ms 12 3 33s764ms 11s254ms 13 6 1m12s 12s105ms 14 7 57s411ms 8s201ms 15 3 59s632ms 19s877ms 17 1 3s988ms 3s988ms 20 2 15s705ms 7s852ms Feb 27 01 2 4s837ms 2s418ms 02 2 8s610ms 4s305ms 04 1 1s384ms 1s384ms 08 4 18s237ms 4s559ms 11 4 52s668ms 13s167ms 13 2 34s249ms 17s124ms 14 5 55s988ms 11s197ms 15 3 31s268ms 10s422ms 16 2 29s482ms 14s741ms 17 3 43s615ms 14s538ms 18 3 9s122ms 3s40ms 19 6 47s960ms 7s993ms 20 1 8s845ms 8s845ms 21 2 26s841ms 13s420ms 22 4 21s466ms 5s366ms 23 3 46s804ms 15s601ms Feb 28 00 2 8s48ms 4s24ms 01 2 11s568ms 5s784ms 02 2 6s99ms 3s49ms 03 10 38s558ms 3s855ms 04 4 9s674ms 2s418ms 05 3 3s937ms 1s312ms 06 4 27s556ms 6s889ms 07 2 23s521ms 11s760ms 08 5 58s272ms 11s654ms 09 3 11s946ms 3s982ms 10 4 50s881ms 12s720ms 11 4 33s600ms 8s400ms 12 2 12s335ms 6s167ms 13 1 3s951ms 3s951ms 14 2 11s814ms 5s907ms 15 2 9s728ms 4s864ms 17 1 4s443ms 4s443ms 18 1 22s470ms 22s470ms 19 6 20s2ms 3s333ms 20 5 9s756ms 1s951ms 21 2 10s931ms 5s465ms 22 4 54s898ms 13s724ms 23 2 4s699ms 2s349ms Mar 01 00 2 2s654ms 1s327ms 01 4 30s548ms 7s637ms 02 1 1s341ms 1s341ms 03 3 28s397ms 9s465ms 04 5 41s376ms 8s275ms 05 6 48s672ms 8s112ms 06 3 27s118ms 9s39ms 07 1 1s96ms 1s96ms 08 1 1s77ms 1s77ms 09 1 3s653ms 3s653ms 10 2 11s986ms 5s993ms 11 4 46s505ms 11s626ms 12 3 46s405ms 15s468ms 13 1 10s322ms 10s322ms 14 1 7s890ms 7s890ms 15 3 10s408ms 3s469ms 17 3 31s518ms 10s506ms 18 4 23s683ms 5s920ms 19 3 6s512ms 2s170ms 20 2 4s796ms 2s398ms 21 3 5s160ms 1s720ms 22 16 1m5s 4s95ms 23 3 43s880ms 14s626ms [ User: pubeu - Total duration: 18m57s - Times executed: 153 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-27 16:47:59 Duration: 28s141ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-27 17:36:39 Duration: 27s681ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-28 11:52:58 Duration: 27s104ms Database: ctdprd51 User: pubeu Bind query: yes
11 542 38m4s 1s3ms 50s68ms 4s214ms select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where (d.id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Feb 23 06 273 19m1s 4s180ms 07 25 1m37s 3s902ms 20 243 17m19s 4s276ms Feb 27 16 1 6s186ms 6s186ms [ User: pubeu - Total duration: 5m30s - Times executed: 83 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2082652) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 06:40:42 Duration: 50s68ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'chemical and drug induced liver injury' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2082652) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 20:32:01 Duration: 49s428ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d007674' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2091673) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 06:50:19 Duration: 23s780ms Bind query: yes
12 512 13h26m9s 1s231ms 18m35s 1m34s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Feb 23 00 5 6m35s 1m19s 01 6 12s585ms 2s97ms 02 5 25m55s 5m11s 03 3 4m12s 1m24s 04 6 29m5s 4m50s 05 1 1s663ms 1s663ms 06 3 2m12s 44s20ms 08 5 10m51s 2m10s 09 2 5s83ms 2s541ms 10 6 5m28s 54s770ms 11 2 3s803ms 1s901ms 12 1 4m22s 4m22s 13 1 1s488ms 1s488ms 14 2 4s694ms 2s347ms 15 2 3s211ms 1s605ms 16 1 1s802ms 1s802ms 18 1 3s269ms 3s269ms 19 3 4m52s 1m37s 21 2 3m29s 1m44s 22 2 4s911ms 2s455ms 23 3 7s713ms 2s571ms Feb 24 00 2 18m37s 9m18s 01 1 1s764ms 1s764ms 02 3 5s456ms 1s818ms 03 1 1s600ms 1s600ms 04 2 3s982ms 1s991ms 05 1 3s123ms 3s123ms 07 1 3s255ms 3s255ms 08 1 2s404ms 2s404ms 09 3 5s618ms 1s872ms 10 1 1s630ms 1s630ms 11 1 1s622ms 1s622ms 12 2 6s499ms 3s249ms 14 2 3m14s 1m37s 16 3 5s102ms 1s700ms 17 4 7m54s 1m58s 18 2 4m7s 2m3s 19 4 5m42s 1m25s 20 2 3s555ms 1s777ms 21 2 4m46s 2m23s 22 5 8s248ms 1s649ms 23 3 7m2s 2m20s Feb 25 00 5 7m22s 1m28s 01 4 4m36s 1m9s 02 5 11s817ms 2s363ms 03 5 17m59s 3m35s 04 8 17s28ms 2s128ms 05 11 11m58s 1m5s 06 6 12s30ms 2s5ms 07 6 6m27s 1m4s 08 8 3m17s 24s674ms 09 16 33m42s 2m6s 10 4 7m37s 1m54s 11 9 3m50s 25s632ms 12 7 11m17s 1m36s 13 4 3m23s 50s817ms 14 4 8m19s 2m4s 15 7 14s149ms 2s21ms 16 13 18m51s 1m27s 17 12 14m22s 1m11s 18 6 2m3s 20s582ms 19 8 15m21s 1m55s 20 5 12m43s 2m32s 21 12 8m6s 40s565ms 22 8 23m33s 2m56s 23 7 18m45s 2m40s Feb 26 00 7 20m44s 2m57s 01 4 8s252ms 2s63ms 05 4 6m41s 1m40s 06 11 9m 49s96ms 07 5 2m52s 34s501ms 08 7 6m12s 53s186ms 09 6 6m22s 1m3s 10 11 18m6s 1m38s 11 8 7m39s 57s442ms 12 3 5s531ms 1s843ms 13 9 9m24s 1m2s 14 4 1m18s 19s590ms 15 2 4s267ms 2s133ms 16 1 5m2s 5m2s 17 2 17m54s 8m57s 22 1 1s553ms 1s553ms Feb 27 00 1 1s676ms 1s676ms 03 1 3s223ms 3s223ms 04 1 2s103ms 2s103ms 05 3 11m42s 3m54s 06 1 11m33s 11m33s 08 3 10m25s 3m28s 09 1 4m52s 4m52s 11 2 17m58s 8m59s 12 2 23m17s 11m38s 13 4 2m38s 39s588ms 14 1 17m52s 17m52s 16 2 2m9s 1m4s 17 3 16s539ms 5s513ms 18 2 4s13ms 2s6ms 19 1 3s621ms 3s621ms 20 1 3s521ms 3s521ms 21 4 3m1s 45s379ms 22 3 3m18s 1m6s 23 2 3s222ms 1s611ms Feb 28 00 3 7m37s 2m32s 01 1 2s158ms 2s158ms 02 3 13m22s 4m27s 03 2 1m48s 54s225ms 04 1 1s611ms 1s611ms 05 1 1s454ms 1s454ms 06 2 5s66ms 2s533ms 07 2 4s95ms 2s47ms 08 1 1s806ms 1s806ms 09 1 1s770ms 1s770ms 10 3 5m26s 1m48s 11 2 4m49s 2m24s 12 3 7s4ms 2s334ms 13 3 7s165ms 2s388ms 14 2 6m29s 3m14s 15 3 5s30ms 1s676ms 16 1 1s575ms 1s575ms 17 3 18m33s 6m11s 18 3 5s499ms 1s833ms 19 1 1s458ms 1s458ms 20 2 6s666ms 3s333ms 21 3 4s934ms 1s644ms 22 1 1s498ms 1s498ms 23 3 4s788ms 1s596ms Mar 01 00 3 5m24s 1m48s 01 1 3s213ms 3s213ms 02 2 4s896ms 2s448ms 03 1 1s708ms 1s708ms 04 4 7s537ms 1s884ms 05 5 17m58s 3m35s 06 1 17m48s 17m48s 07 1 2s444ms 2s444ms 08 2 4s641ms 2s320ms 09 2 3s368ms 1s684ms 10 2 21m5s 10m32s 11 1 1s531ms 1s531ms 12 1 3s263ms 3s263ms 15 1 1s584ms 1s584ms 16 2 5s31ms 2s515ms 17 3 22m36s 7m32s 18 1 5m2s 5m2s 19 2 17m55s 8m57s 21 3 4m16s 1m25s 22 11 28m8s 2m33s 23 2 3s531ms 1s765ms [ User: pubeu - Total duration: 3h15m14s - Times executed: 111 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-24 00:24:06 Duration: 18m35s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-28 17:07:48 Duration: 18m29s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-03-01 10:56:25 Duration: 18m11s Bind query: yes
13 486 35m28s 1s 7s284ms 4s380ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Feb 23 00 2 6s203ms 3s101ms 01 2 6s92ms 3s46ms 02 2 10s681ms 5s340ms 03 1 5s377ms 5s377ms 04 2 2s14ms 1s7ms 07 4 20s461ms 5s115ms 09 5 17s363ms 3s472ms 10 3 15s286ms 5s95ms 11 2 10s603ms 5s301ms 12 1 4s702ms 4s702ms 14 5 24s67ms 4s813ms 15 1 5s382ms 5s382ms 18 1 4s938ms 4s938ms 19 1 4s680ms 4s680ms 20 2 2s172ms 1s86ms 21 2 9s627ms 4s813ms 22 4 11s899ms 2s974ms 23 10 44s711ms 4s471ms Feb 24 00 6 34s993ms 5s832ms 02 2 9s416ms 4s708ms 04 1 4s719ms 4s719ms 06 1 5s214ms 5s214ms 07 1 5s371ms 5s371ms 08 4 11s637ms 2s909ms 10 2 6s220ms 3s110ms 11 1 4s802ms 4s802ms 12 1 4s850ms 4s850ms 13 7 36s931ms 5s275ms 14 1 4s887ms 4s887ms 15 1 5s14ms 5s14ms 17 9 40s736ms 4s526ms 19 1 5s357ms 5s357ms 20 2 9s921ms 4s960ms 21 1 5s284ms 5s284ms 22 1 4s730ms 4s730ms 23 5 23s844ms 4s768ms Feb 25 00 7 27s601ms 3s943ms 02 1 5s446ms 5s446ms 03 2 6s617ms 3s308ms 04 2 10s565ms 5s282ms 05 3 12s452ms 4s150ms 06 1 4s944ms 4s944ms 07 2 10s502ms 5s251ms 08 2 10s917ms 5s458ms 10 4 16s246ms 4s61ms 11 4 8s254ms 2s63ms 12 2 6s857ms 3s428ms 13 3 11s484ms 3s828ms 14 3 15s803ms 5s267ms 15 2 10s264ms 5s132ms 17 2 6s415ms 3s207ms 18 8 46s710ms 5s838ms 19 3 11s664ms 3s888ms 20 1 1s26ms 1s26ms 21 2 6s941ms 3s470ms 22 3 11s662ms 3s887ms 23 4 16s966ms 4s241ms Feb 26 00 2 9s890ms 4s945ms 01 9 34s798ms 3s866ms 05 1 5s44ms 5s44ms 07 3 11s853ms 3s951ms 08 1 6s961ms 6s961ms 09 1 7s249ms 7s249ms 10 2 12s344ms 6s172ms 11 5 19s617ms 3s923ms 12 1 5s725ms 5s725ms 13 1 6s585ms 6s585ms 14 1 6s674ms 6s674ms 15 1 5s364ms 5s364ms 17 1 1s76ms 1s76ms 19 1 5s867ms 5s867ms 20 2 12s112ms 6s56ms 23 10 42s736ms 4s273ms Feb 27 00 1 1s68ms 1s68ms 01 1 1s89ms 1s89ms 02 3 17s2ms 5s667ms 03 2 7s248ms 3s624ms 04 1 5s10ms 5s10ms 06 1 5s896ms 5s896ms 07 1 6s200ms 6s200ms 08 1 1s68ms 1s68ms 11 5 13s810ms 2s762ms 12 10 33s889ms 3s388ms 13 5 17s391ms 3s478ms 14 2 6s961ms 3s480ms 15 4 24s584ms 6s146ms 16 3 17s189ms 5s729ms 17 3 15s828ms 5s276ms 18 3 11s707ms 3s902ms 19 1 5s233ms 5s233ms 20 3 13s409ms 4s469ms 21 5 19s965ms 3s993ms 22 9 42s306ms 4s700ms 23 8 36s148ms 4s518ms Feb 28 00 7 37s103ms 5s300ms 01 6 22s2ms 3s667ms 02 3 11s377ms 3s792ms 03 2 10s752ms 5s376ms 04 2 10s475ms 5s237ms 05 12 45s656ms 3s804ms 06 5 23s588ms 4s717ms 07 4 16s469ms 4s117ms 08 2 10s271ms 5s135ms 09 3 11s511ms 3s837ms 10 3 11s442ms 3s814ms 11 6 29s81ms 4s846ms 12 3 16s119ms 5s373ms 13 5 18s617ms 3s723ms 14 4 17s11ms 4s252ms 15 4 21s212ms 5s303ms 16 3 7s177ms 2s392ms 17 11 45s705ms 4s155ms 18 10 43s62ms 4s306ms 19 9 29s841ms 3s315ms 20 1 5s748ms 5s748ms 21 2 10s680ms 5s340ms 22 2 10s484ms 5s242ms 23 5 21s623ms 4s324ms Mar 01 00 9 46s392ms 5s154ms 01 2 6s542ms 3s271ms 02 5 13s330ms 2s666ms 03 1 5s185ms 5s185ms 04 5 26s408ms 5s281ms 06 2 10s479ms 5s239ms 07 3 15s445ms 5s148ms 08 11 49s71ms 4s461ms 09 8 38s334ms 4s791ms 10 3 15s537ms 5s179ms 11 1 1s7ms 1s7ms 12 5 24s600ms 4s920ms 13 2 9s345ms 4s672ms 14 2 9s709ms 4s854ms 15 3 14s320ms 4s773ms 16 3 15s252ms 5s84ms 17 7 22s141ms 3s163ms 18 2 9s605ms 4s802ms 19 1 5s275ms 5s275ms 20 3 12s96ms 4s32ms 21 6 21s387ms 3s564ms 22 13 1m9s 5s328ms 23 3 14s484ms 4s828ms [ User: pubeu - Total duration: 8m31s - Times executed: 108 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1286983' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-03-01 22:16:34 Duration: 7s284ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1316410' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-02-26 09:06:30 Duration: 7s249ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1442752' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-02-27 15:55:30 Duration: 7s63ms Database: ctdprd51 User: pubeu Bind query: yes
14 421 40m30s 1s3ms 20s5ms 5s772ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Feb 23 00 1 4s501ms 4s501ms 01 1 1s572ms 1s572ms 02 3 26s256ms 8s752ms 03 3 33s117ms 11s39ms 04 5 13s657ms 2s731ms 05 4 13s813ms 3s453ms 06 3 31s448ms 10s482ms 07 3 37s377ms 12s459ms 08 4 9s562ms 2s390ms 09 5 16s647ms 3s329ms 10 3 29s937ms 9s979ms 11 4 12s294ms 3s73ms 12 2 4s835ms 2s417ms 13 2 7s913ms 3s956ms 16 1 1s43ms 1s43ms 18 1 2s483ms 2s483ms 19 1 10s606ms 10s606ms 20 3 18s855ms 6s285ms 21 3 14s638ms 4s879ms 22 2 6s615ms 3s307ms 23 2 2s605ms 1s302ms Feb 24 00 3 20s90ms 6s696ms 01 5 45s333ms 9s66ms 02 5 24s814ms 4s962ms 03 3 10s209ms 3s403ms 06 2 6s432ms 3s216ms 08 2 21s551ms 10s775ms 09 3 17s753ms 5s917ms 10 1 1s11ms 1s11ms 11 2 33s915ms 16s957ms 12 3 13s226ms 4s408ms 13 2 9s375ms 4s687ms 14 3 8s110ms 2s703ms 15 1 5s289ms 5s289ms 16 2 16s931ms 8s465ms 17 3 11s130ms 3s710ms 18 4 11s903ms 2s975ms 19 3 36s95ms 12s31ms 20 5 13s334ms 2s666ms 21 2 21s513ms 10s756ms 22 1 15s691ms 15s691ms 23 7 25s262ms 3s608ms Feb 25 00 3 19s88ms 6s362ms 01 3 5s614ms 1s871ms 02 5 11s39ms 2s207ms 03 1 4s160ms 4s160ms 04 4 14s230ms 3s557ms 05 10 1m30s 9s48ms 06 4 26s469ms 6s617ms 07 3 20s633ms 6s877ms 08 5 33s763ms 6s752ms 09 10 1m13s 7s376ms 10 5 54s491ms 10s898ms 11 4 34s654ms 8s663ms 12 8 52s244ms 6s530ms 13 5 12s416ms 2s483ms 14 4 30s971ms 7s742ms 15 2 2s395ms 1s197ms 16 8 49s266ms 6s158ms 17 5 45s789ms 9s157ms 18 1 1s761ms 1s761ms 19 5 20s354ms 4s70ms 20 12 52s862ms 4s405ms 21 4 32s738ms 8s184ms 22 4 15s210ms 3s802ms 23 6 22s523ms 3s753ms Feb 26 00 6 27s960ms 4s660ms 01 2 32s838ms 16s419ms 02 4 36s647ms 9s161ms 05 2 18s683ms 9s341ms 06 6 20s910ms 3s485ms 07 4 11s432ms 2s858ms 08 6 29s962ms 4s993ms 09 2 5s902ms 2s951ms 10 3 3s491ms 1s163ms 11 10 59s241ms 5s924ms 12 6 46s24ms 7s670ms 13 4 12s875ms 3s218ms 14 4 6s101ms 1s525ms 15 3 7s68ms 2s356ms 16 1 15s895ms 15s895ms Feb 27 02 3 14s492ms 4s830ms 04 1 1s176ms 1s176ms 07 1 1s164ms 1s164ms 08 1 1s906ms 1s906ms 11 1 16s118ms 16s118ms 12 1 5s542ms 5s542ms 13 2 4s332ms 2s166ms 14 2 18s785ms 9s392ms 15 2 33s565ms 16s782ms 17 5 43s198ms 8s639ms 18 2 17s396ms 8s698ms 19 1 2s419ms 2s419ms 20 1 16s809ms 16s809ms 22 1 2s895ms 2s895ms 23 4 38s497ms 9s624ms Feb 28 00 1 1s30ms 1s30ms 01 1 3s480ms 3s480ms 02 2 4s602ms 2s301ms 03 2 17s469ms 8s734ms 04 2 4s916ms 2s458ms 05 2 5s628ms 2s814ms 06 1 1s49ms 1s49ms 07 5 30s179ms 6s35ms 08 1 5s844ms 5s844ms 09 7 21s804ms 3s114ms 10 3 28s328ms 9s442ms 11 1 1s89ms 1s89ms 12 2 2s172ms 1s86ms 13 2 19s614ms 9s807ms 14 1 16s51ms 16s51ms 16 4 37s219ms 9s304ms 17 1 1s167ms 1s167ms 18 5 39s222ms 7s844ms 19 2 5s629ms 2s814ms 20 1 2s941ms 2s941ms 21 5 25s82ms 5s16ms 22 2 18s621ms 9s310ms 23 3 20s598ms 6s866ms Mar 01 00 4 21s373ms 5s343ms 02 1 1s18ms 1s18ms 03 4 21s171ms 5s292ms 04 1 1s44ms 1s44ms 06 3 13s500ms 4s500ms 07 1 2s480ms 2s480ms 08 2 10s852ms 5s426ms 09 3 18s179ms 6s59ms 12 2 6s657ms 3s328ms 14 3 6s460ms 2s153ms 15 3 14s760ms 4s920ms 16 1 1s29ms 1s29ms 19 2 3s228ms 1s614ms 20 1 16s199ms 16s199ms 21 1 16s267ms 16s267ms 22 3 13s250ms 4s416ms [ User: pubeu - Total duration: 8m45s - Times executed: 94 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-28 10:15:02 Duration: 20s5ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-27 17:36:31 Duration: 19s698ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-27 23:35:44 Duration: 17s878ms Database: ctdprd51 User: pubeu Bind query: yes
15 343 8m6s 1s281ms 1s784ms 1s419ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Feb 23 00 1 1s433ms 1s433ms 02 1 1s332ms 1s332ms 03 2 2s810ms 1s405ms 04 2 2s705ms 1s352ms 05 2 2s925ms 1s462ms 06 1 1s487ms 1s487ms 07 1 1s444ms 1s444ms 08 1 1s394ms 1s394ms 09 1 1s346ms 1s346ms 10 1 1s448ms 1s448ms 12 1 1s313ms 1s313ms 13 1 1s454ms 1s454ms 22 1 1s310ms 1s310ms 23 2 2s707ms 1s353ms Feb 24 02 1 1s486ms 1s486ms 04 2 2s658ms 1s329ms 05 4 5s428ms 1s357ms 07 2 2s597ms 1s298ms 08 2 2s630ms 1s315ms 09 3 3s921ms 1s307ms 11 3 4s354ms 1s451ms 12 1 1s317ms 1s317ms 13 1 1s344ms 1s344ms 14 1 1s333ms 1s333ms 18 2 2s981ms 1s490ms 19 1 1s488ms 1s488ms 21 3 4s467ms 1s489ms 22 1 1s532ms 1s532ms 23 3 4s306ms 1s435ms Feb 25 01 1 1s403ms 1s403ms 02 1 1s487ms 1s487ms 04 2 2s628ms 1s314ms 05 2 2s876ms 1s438ms 06 2 2s655ms 1s327ms 08 2 2s715ms 1s357ms 09 5 6s959ms 1s391ms 12 1 1s426ms 1s426ms 13 1 1s384ms 1s384ms 16 1 1s432ms 1s432ms 18 2 2s775ms 1s387ms 20 1 1s339ms 1s339ms 23 2 2s723ms 1s361ms Feb 26 00 2 2s931ms 1s465ms 05 2 2s853ms 1s426ms 12 1 1s391ms 1s391ms 14 1 1s462ms 1s462ms 15 1 1s377ms 1s377ms 16 1 1s443ms 1s443ms 19 1 1s557ms 1s557ms 20 1 1s450ms 1s450ms 22 2 2s830ms 1s415ms Feb 27 00 3 4s296ms 1s432ms 02 1 1s376ms 1s376ms 04 1 1s294ms 1s294ms 05 2 2s846ms 1s423ms 06 1 1s450ms 1s450ms 09 1 1s286ms 1s286ms 10 3 4s192ms 1s397ms 11 6 8s291ms 1s381ms 12 6 8s367ms 1s394ms 13 2 3s27ms 1s513ms 14 8 11s523ms 1s440ms 15 6 9s18ms 1s503ms 16 2 2s950ms 1s475ms 17 1 1s490ms 1s490ms 19 3 4s328ms 1s442ms 20 4 6s111ms 1s527ms 21 4 5s755ms 1s438ms 22 25 36s429ms 1s457ms 23 6 8s647ms 1s441ms Feb 28 00 2 2s792ms 1s396ms 01 6 8s493ms 1s415ms 02 7 9s957ms 1s422ms 03 4 5s617ms 1s404ms 04 2 2s868ms 1s434ms 05 5 7s85ms 1s417ms 06 1 1s431ms 1s431ms 07 4 5s660ms 1s415ms 08 3 4s307ms 1s435ms 09 4 5s689ms 1s422ms 10 3 4s328ms 1s442ms 11 3 4s349ms 1s449ms 12 3 4s343ms 1s447ms 13 11 15s694ms 1s426ms 14 1 1s423ms 1s423ms 15 6 8s469ms 1s411ms 16 2 2s935ms 1s467ms 17 1 1s447ms 1s447ms 18 6 8s453ms 1s408ms 19 2 2s796ms 1s398ms 20 3 4s123ms 1s374ms 21 2 2s658ms 1s329ms 22 4 5s503ms 1s375ms 23 3 4s206ms 1s402ms Mar 01 00 3 4s261ms 1s420ms 01 4 5s679ms 1s419ms 02 3 4s134ms 1s378ms 03 2 2s852ms 1s426ms 04 6 8s506ms 1s417ms 05 3 4s205ms 1s401ms 06 4 5s549ms 1s387ms 07 7 10s298ms 1s471ms 08 4 5s602ms 1s400ms 09 2 2s860ms 1s430ms 10 3 4s360ms 1s453ms 11 2 2s817ms 1s408ms 12 4 5s715ms 1s428ms 13 2 2s819ms 1s409ms 14 5 7s40ms 1s408ms 15 2 2s765ms 1s382ms 16 1 1s419ms 1s419ms 17 2 2s877ms 1s438ms 18 6 8s342ms 1s390ms 19 4 5s656ms 1s414ms 20 3 4s257ms 1s419ms 21 7 10s13ms 1s430ms 22 7 10s144ms 1s449ms 23 1 1s387ms 1s387ms [ User: pubeu - Total duration: 1m57s - Times executed: 82 ]
[ User: qaeu - Total duration: 1s389ms - Times executed: 1 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'H' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-03-01 22:08:04 Duration: 1s784ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'D' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-02-27 15:46:46 Duration: 1s691ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-02-27 20:56:58 Duration: 1s593ms Database: ctdprd51 User: pubeu Bind query: yes
16 335 14m2s 1s10ms 4s520ms 2s515ms with recursive sub_node ( object_id, id, path, lvl ) as ( select n.object_id, n.id, array[n.nm_sort], ? from dag_node n where n.object_id = ? union all select n.object_id, n.id, cast(path || n.nm_sort as varchar(?)[]), sn.lvl + ? from dag_node n inner join sub_node sn on (n.parent_id = sn.id)) select distinct t.nm prinm, t.nm_html prinmhtml, t.secondary_nm secondarynm, t.acc_db_cd accdbcd, t.acc_txt termacc, t.is_leaf isleaf, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_genes hasgenes, sn.lvl, sn.path, max(sn.lvl) over () maxlvl, t.has_phenotypes hasphenotypes from sub_node sn inner join term t on sn.object_id = t.id where sn.lvl <= ? order by sn.path;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Feb 23 00 2 4s116ms 2s58ms 02 3 6s510ms 2s170ms 03 2 5s113ms 2s556ms 04 2 5s338ms 2s669ms 05 7 16s920ms 2s417ms 06 2 4s431ms 2s215ms 08 3 6s794ms 2s264ms 09 6 16s634ms 2s772ms 10 3 6s343ms 2s114ms 11 1 1s995ms 1s995ms 12 1 3s282ms 3s282ms 13 1 3s306ms 3s306ms 14 1 3s337ms 3s337ms 21 2 4s859ms 2s429ms 22 1 1s786ms 1s786ms 23 2 5s187ms 2s593ms Feb 24 00 1 4s182ms 4s182ms 01 2 6s679ms 3s339ms 03 1 1s958ms 1s958ms 04 3 7s711ms 2s570ms 05 7 16s88ms 2s298ms 07 1 2s845ms 2s845ms 08 2 5s90ms 2s545ms 10 4 11s243ms 2s810ms 11 1 2s813ms 2s813ms 12 1 2s408ms 2s408ms 13 1 2s803ms 2s803ms 15 2 5s380ms 2s690ms 16 1 2s200ms 2s200ms 17 1 1s933ms 1s933ms 18 2 5s269ms 2s634ms 19 5 11s532ms 2s306ms 20 2 5s650ms 2s825ms 21 6 14s332ms 2s388ms 22 2 5s720ms 2s860ms 23 6 13s938ms 2s323ms Feb 25 00 2 4s383ms 2s191ms 01 3 6s915ms 2s305ms 02 6 14s178ms 2s363ms 03 5 12s158ms 2s431ms 04 6 13s985ms 2s330ms 05 8 18s584ms 2s323ms 06 4 8s365ms 2s91ms 07 5 12s558ms 2s511ms 08 7 17s91ms 2s441ms 09 10 25s201ms 2s520ms 10 4 10s402ms 2s600ms 11 7 18s756ms 2s679ms 12 5 11s356ms 2s271ms 13 7 15s664ms 2s237ms 14 3 6s818ms 2s272ms 15 8 20s226ms 2s528ms 16 6 14s673ms 2s445ms 17 7 17s192ms 2s456ms 18 5 12s558ms 2s511ms 19 5 10s998ms 2s199ms 20 4 7s822ms 1s955ms 21 3 7s505ms 2s501ms 22 4 10s28ms 2s507ms 23 6 14s845ms 2s474ms Feb 26 00 5 12s879ms 2s575ms 01 5 11s402ms 2s280ms 02 1 3s325ms 3s325ms 05 6 13s345ms 2s224ms 06 8 19s242ms 2s405ms 07 3 8s249ms 2s749ms 08 6 17s64ms 2s844ms 09 5 13s738ms 2s747ms 10 7 15s844ms 2s263ms 11 1 1s941ms 1s941ms 12 9 25s182ms 2s798ms 13 5 12s220ms 2s444ms 14 5 11s878ms 2s375ms 20 1 3s364ms 3s364ms Feb 27 02 4 13s491ms 3s372ms 05 5 12s24ms 2s404ms 12 1 2s149ms 2s149ms 13 2 7s349ms 3s674ms 17 3 8s280ms 2s760ms 22 1 3s536ms 3s536ms 23 1 3s362ms 3s362ms Feb 28 02 1 1s980ms 1s980ms 05 4 8s979ms 2s244ms 10 2 4s669ms 2s334ms 12 1 3s54ms 3s54ms 13 5 12s627ms 2s525ms 16 1 3s384ms 3s384ms 22 1 3s341ms 3s341ms Mar 01 01 1 3s372ms 3s372ms 03 1 3s389ms 3s389ms 05 5 12s275ms 2s455ms 06 1 3s383ms 3s383ms 10 3 7s949ms 2s649ms 11 1 2s921ms 2s921ms 13 1 3s335ms 3s335ms 19 2 6s726ms 3s363ms 21 1 3s314ms 3s314ms [ User: pubeu - Total duration: 3m - Times executed: 64 ]
[ User: qaeu - Total duration: 34s701ms - Times executed: 10 ]
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '655185' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-02-26 08:52:31 Duration: 4s520ms Database: ctdprd51 User: pubeu Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '655185' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-02-24 00:11:28 Duration: 4s182ms Bind query: yes
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WITH recursive sub_node ( object_id, id, path, lvl ) AS ( SELECT n.object_id, n.id, ARRAY[n.nm_sort], 1 FROM dag_node n WHERE n.object_id = '655185' UNION ALL SELECT n.object_id, n.id, CAST(path || n.nm_sort AS varchar(600)[]), sn.lvl + 1 FROM dag_node n INNER JOIN sub_node sn ON (n.parent_id = sn.id)) SELECT /* TreeTermBasicsDAO.getDescendants */ DISTINCT t.nm priNm, t.nm_html priNmHtml, t.secondary_nm secondaryNm, t.acc_db_cd accDbCd, t.acc_txt termAcc, t.is_leaf isLeaf, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_genes hasGenes, sn.lvl, sn.path, MAX(sn.lvl) OVER () maxLvl, t.has_phenotypes hasPhenotypes FROM sub_node sn INNER JOIN term t ON sn.object_id = t.id WHERE sn.lvl <= 4 ORDER BY sn.path;
Date: 2025-02-27 13:58:50 Duration: 3s918ms Bind query: yes
17 327 22m25s 3s858ms 6s124ms 4s113ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Feb 23 00 1 4s27ms 4s27ms 01 2 8s244ms 4s122ms 04 2 8s261ms 4s130ms 08 2 7s936ms 3s968ms 09 2 8s421ms 4s210ms 10 1 3s951ms 3s951ms 11 1 4s63ms 4s63ms 14 2 8s243ms 4s121ms 15 4 15s781ms 3s945ms 16 4 18s906ms 4s726ms 18 1 3s942ms 3s942ms 19 1 3s944ms 3s944ms 21 1 3s942ms 3s942ms 22 4 15s990ms 3s997ms 23 4 17s297ms 4s324ms Feb 24 00 4 16s196ms 4s49ms 01 2 7s986ms 3s993ms 02 5 19s875ms 3s975ms 03 1 4s35ms 4s35ms 04 4 16s254ms 4s63ms 05 1 3s919ms 3s919ms 06 1 3s928ms 3s928ms 07 1 4s153ms 4s153ms 08 3 12s106ms 4s35ms 09 2 8s34ms 4s17ms 10 3 11s984ms 3s994ms 11 3 11s966ms 3s988ms 12 4 15s925ms 3s981ms 13 2 8s559ms 4s279ms 14 1 4s242ms 4s242ms 15 7 27s986ms 3s998ms 16 1 4s139ms 4s139ms 17 2 8s275ms 4s137ms 20 3 12s351ms 4s117ms 21 1 4s51ms 4s51ms 22 1 3s899ms 3s899ms Feb 25 00 1 4s14ms 4s14ms 02 1 3s894ms 3s894ms 03 4 15s931ms 3s982ms 04 6 24s117ms 4s19ms 05 5 20s137ms 4s27ms 06 3 13s604ms 4s534ms 07 3 12s43ms 4s14ms 08 6 23s914ms 3s985ms 09 3 12s752ms 4s250ms 10 7 28s494ms 4s70ms 12 4 15s800ms 3s950ms 13 3 12s70ms 4s23ms 14 4 16s356ms 4s89ms 15 2 8s265ms 4s132ms 16 1 4s102ms 4s102ms 17 3 12s308ms 4s102ms 18 1 3s998ms 3s998ms 19 3 12s112ms 4s37ms 20 6 26s429ms 4s404ms 22 2 8s166ms 4s83ms 23 3 12s101ms 4s33ms Feb 26 00 1 4s97ms 4s97ms 01 1 4s182ms 4s182ms 02 1 4s292ms 4s292ms 05 1 4s191ms 4s191ms 07 1 4s53ms 4s53ms 08 1 4s295ms 4s295ms 09 6 26s897ms 4s482ms 10 2 8s426ms 4s213ms 12 2 8s484ms 4s242ms 13 1 4s242ms 4s242ms 14 3 12s548ms 4s182ms 15 9 37s158ms 4s128ms 19 2 8s381ms 4s190ms 20 2 8s154ms 4s77ms 21 2 8s282ms 4s141ms 22 1 4s94ms 4s94ms 23 2 8s245ms 4s122ms Feb 27 00 3 12s702ms 4s234ms 01 2 8s223ms 4s111ms 02 6 24s796ms 4s132ms 03 12 48s799ms 4s66ms 04 2 8s450ms 4s225ms 05 3 12s363ms 4s121ms 06 2 8s190ms 4s95ms 07 3 12s62ms 4s20ms 08 4 16s684ms 4s171ms 09 5 20s258ms 4s51ms 10 6 24s887ms 4s147ms 11 6 24s251ms 4s41ms 12 2 8s391ms 4s195ms 14 5 21s341ms 4s268ms 16 1 4s21ms 4s21ms 20 2 8s142ms 4s71ms 21 4 16s749ms 4s187ms 22 1 4s252ms 4s252ms 23 2 8s60ms 4s30ms Feb 28 00 4 16s422ms 4s105ms 01 4 16s239ms 4s59ms 02 6 24s635ms 4s105ms 03 3 12s262ms 4s87ms 05 5 20s541ms 4s108ms 06 1 4s224ms 4s224ms 08 3 12s212ms 4s70ms 09 3 12s371ms 4s123ms 10 1 4s94ms 4s94ms 11 1 4s202ms 4s202ms 12 5 20s736ms 4s147ms 13 1 4s97ms 4s97ms 14 2 7s972ms 3s986ms 15 3 12s51ms 4s17ms 22 1 4s218ms 4s218ms 23 2 8s257ms 4s128ms Mar 01 00 2 8s409ms 4s204ms 02 1 4s389ms 4s389ms 03 1 3s980ms 3s980ms 04 2 8s338ms 4s169ms 05 1 3s995ms 3s995ms 07 1 4s257ms 4s257ms 08 1 4s45ms 4s45ms 10 2 8s149ms 4s74ms 11 3 12s658ms 4s219ms 16 1 4s18ms 4s18ms 19 2 8s273ms 4s136ms 21 1 4s47ms 4s47ms [ User: pubeu - Total duration: 6m - Times executed: 87 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1343984') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1343984') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-02-25 20:37:52 Duration: 6s124ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1267390') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1267390') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-02-23 16:43:40 Duration: 5s407ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1387047') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1387047') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-02-26 09:13:34 Duration: 5s108ms Database: ctdprd51 User: pubeu Bind query: yes
18 219 34m18s 1s5ms 1m7s 9s401ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Feb 23 02 1 1s958ms 1s958ms 07 10 15s50ms 1s505ms 08 5 2m17s 27s454ms 11 1 26s92ms 26s92ms 18 1 1s142ms 1s142ms Feb 24 01 1 15s173ms 15s173ms 04 1 1s637ms 1s637ms 07 2 3s424ms 1s712ms 20 1 15s43ms 15s43ms 21 1 1s167ms 1s167ms 22 1 5s382ms 5s382ms Feb 25 02 1 4s530ms 4s530ms 04 2 3s362ms 1s681ms 11 1 1s79ms 1s79ms 13 1 3s361ms 3s361ms 16 1 4s780ms 4s780ms 18 2 5s703ms 2s851ms 20 1 2s598ms 2s598ms 22 2 3s763ms 1s881ms 23 9 13s704ms 1s522ms Feb 26 00 1 2s42ms 2s42ms 01 2 2s137ms 1s68ms 02 4 2m9s 32s449ms 05 1 17s610ms 17s610ms 06 1 4s17ms 4s17ms 07 3 9s561ms 3s187ms 08 31 4m10s 8s81ms 09 12 1m44s 8s704ms 10 1 2s449ms 2s449ms 18 3 36s747ms 12s249ms 20 1 15s608ms 15s608ms 21 17 19s146ms 1s126ms 22 8 11s168ms 1s396ms 23 2 53s403ms 26s701ms Feb 27 00 9 59s569ms 6s618ms 03 3 34s355ms 11s451ms 09 1 29s774ms 29s774ms 10 1 26s365ms 26s365ms 12 1 1s197ms 1s197ms 13 2 47s379ms 23s689ms 14 1 1s280ms 1s280ms 15 2 1m32s 46s139ms 16 5 3m6s 37s278ms 18 1 20s367ms 20s367ms 19 1 15s466ms 15s466ms 20 1 1s253ms 1s253ms 23 1 1s74ms 1s74ms Feb 28 00 3 34s723ms 11s574ms 02 2 16s515ms 8s257ms 03 1 1s17ms 1s17ms 04 1 14s854ms 14s854ms 06 2 2s490ms 1s245ms 07 1 2s514ms 2s514ms 08 2 6s805ms 3s402ms 09 1 15s675ms 15s675ms 11 1 20s681ms 20s681ms 12 1 3s6ms 3s6ms 13 2 8s417ms 4s208ms 15 2 21s149ms 10s574ms 17 1 9s367ms 9s367ms 19 1 11s488ms 11s488ms 21 7 11s463ms 1s637ms 23 1 1s119ms 1s119ms Mar 01 00 1 1s467ms 1s467ms 02 1 15s241ms 15s241ms 04 1 2s111ms 2s111ms 05 2 1m27s 43s540ms 07 5 1m13s 14s683ms 08 1 1s684ms 1s684ms 09 2 5s123ms 2s561ms 10 3 1m10s 23s500ms 11 3 28s631ms 9s543ms 17 1 1s873ms 1s873ms 18 1 1s108ms 1s108ms 19 1 16s251ms 16s251ms 21 5 1m56s 23s303ms 23 2 14s912ms 7s456ms [ User: pubeu - Total duration: 10m20s - Times executed: 74 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081644') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-03-01 05:43:10 Duration: 1m7s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-02-26 02:18:51 Duration: 50s556ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086420') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-02-27 16:53:44 Duration: 49s386ms Bind query: yes
19 215 5m52s 1s6ms 4s768ms 1s638ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Feb 23 00 1 1s388ms 1s388ms 01 2 3s496ms 1s748ms 04 2 3s492ms 1s746ms 05 2 2s561ms 1s280ms 07 2 2s829ms 1s414ms 09 1 2s493ms 2s493ms 11 1 2s407ms 2s407ms 12 1 2s279ms 2s279ms 16 1 1s599ms 1s599ms 19 1 1s475ms 1s475ms 21 1 1s242ms 1s242ms 23 2 3s287ms 1s643ms Feb 24 00 1 1s21ms 1s21ms 02 1 1s107ms 1s107ms 04 1 2s426ms 2s426ms 06 1 1s13ms 1s13ms 09 1 2s310ms 2s310ms 12 6 9s196ms 1s532ms 14 1 2s360ms 2s360ms 17 2 2s816ms 1s408ms 18 1 1s87ms 1s87ms 19 1 1s588ms 1s588ms 20 1 1s19ms 1s19ms 21 2 3s836ms 1s918ms Feb 25 00 1 1s11ms 1s11ms 01 1 1s580ms 1s580ms 02 1 1s436ms 1s436ms 03 1 1s694ms 1s694ms 04 1 1s14ms 1s14ms 05 3 5s54ms 1s684ms 06 1 1s41ms 1s41ms 08 5 8s566ms 1s713ms 09 1 1s552ms 1s552ms 10 1 1s517ms 1s517ms 11 1 1s126ms 1s126ms 13 2 4s763ms 2s381ms 16 2 3s321ms 1s660ms 17 1 1s626ms 1s626ms 18 1 1s634ms 1s634ms 20 1 1s134ms 1s134ms 21 5 8s612ms 1s722ms 22 1 1s22ms 1s22ms 23 1 1s445ms 1s445ms Feb 26 01 1 1s160ms 1s160ms 06 1 1s675ms 1s675ms 13 1 2s818ms 2s818ms 15 5 11s420ms 2s284ms 23 1 1s198ms 1s198ms Feb 27 01 2 3s728ms 1s864ms 02 1 1s783ms 1s783ms 04 1 1s207ms 1s207ms 06 2 4s370ms 2s185ms 08 1 1s90ms 1s90ms 09 1 1s204ms 1s204ms 10 2 2s111ms 1s55ms 11 2 2s847ms 1s423ms 12 1 1s6ms 1s6ms 13 1 1s148ms 1s148ms 14 1 1s810ms 1s810ms 15 2 2s430ms 1s215ms 16 3 4s931ms 1s643ms 17 1 1s193ms 1s193ms 18 2 2s706ms 1s353ms 21 3 5s196ms 1s732ms 23 3 4s173ms 1s391ms Feb 28 00 3 5s132ms 1s710ms 01 5 9s401ms 1s880ms 02 2 4s308ms 2s154ms 04 2 3s566ms 1s783ms 05 6 10s713ms 1s785ms 06 1 1s165ms 1s165ms 08 3 3s953ms 1s317ms 09 3 6s261ms 2s87ms 10 2 7s142ms 3s571ms 11 2 2s853ms 1s426ms 12 2 3s544ms 1s772ms 13 5 8s837ms 1s767ms 14 2 3s442ms 1s721ms 15 4 8s561ms 2s140ms 16 4 6s501ms 1s625ms 17 2 2s671ms 1s335ms 18 3 3s423ms 1s141ms 19 1 2s447ms 2s447ms 20 1 2s351ms 2s351ms 22 5 7s327ms 1s465ms 23 2 2s610ms 1s305ms Mar 01 00 2 4s30ms 2s15ms 01 2 2s451ms 1s225ms 02 4 6s296ms 1s574ms 03 1 2s356ms 2s356ms 04 1 2s417ms 2s417ms 05 1 1s149ms 1s149ms 06 3 4s406ms 1s468ms 07 3 6s 2s 09 5 7s693ms 1s538ms 10 2 2s181ms 1s90ms 11 2 3s425ms 1s712ms 12 1 1s616ms 1s616ms 13 3 5s683ms 1s894ms 14 3 3s653ms 1s217ms 15 1 1s84ms 1s84ms 16 2 2s203ms 1s101ms 17 2 3s761ms 1s880ms 18 1 1s644ms 1s644ms 19 1 1s135ms 1s135ms 20 3 5s59ms 1s686ms 21 2 2s116ms 1s58ms 22 2 3s417ms 1s708ms 23 3 3s630ms 1s210ms [ User: pubeu - Total duration: 1m51s - Times executed: 72 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2088132') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-28 10:10:09 Duration: 4s768ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2086420') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-26 15:11:59 Duration: 3s750ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2093721') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-26 15:12:00 Duration: 3s282ms Database: ctdprd51 User: pubeu Bind query: yes
20 144 9m30s 1s6ms 57s2ms 3s963ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Feb 23 02 1 1s827ms 1s827ms 03 1 2s239ms 2s239ms 06 1 1s6ms 1s6ms 08 2 25s886ms 12s943ms 12 4 9s675ms 2s418ms 14 1 13s669ms 13s669ms 15 1 2s185ms 2s185ms 21 4 4s257ms 1s64ms Feb 24 03 1 1s595ms 1s595ms 04 2 4s406ms 2s203ms 16 1 2s154ms 2s154ms 17 1 2s341ms 2s341ms 18 1 2s671ms 2s671ms 22 1 4s293ms 4s293ms Feb 25 02 2 3s173ms 1s586ms 03 1 1s425ms 1s425ms 04 1 2s69ms 2s69ms 05 1 2s89ms 2s89ms 07 1 2s25ms 2s25ms Feb 26 07 7 11s732ms 1s676ms 08 3 4s683ms 1s561ms 10 2 6s299ms 3s149ms 11 1 2s811ms 2s811ms 12 1 2s321ms 2s321ms 13 1 1s655ms 1s655ms 18 1 1s866ms 1s866ms 20 1 2s149ms 2s149ms 21 1 5s559ms 5s559ms 22 1 5s910ms 5s910ms 23 1 3s443ms 3s443ms Feb 27 00 1 2s252ms 2s252ms 03 3 7s390ms 2s463ms 04 3 8s57ms 2s685ms 06 1 2s775ms 2s775ms 07 4 7s847ms 1s961ms 08 1 24s375ms 24s375ms 10 3 8s460ms 2s820ms 11 1 43s147ms 43s147ms 12 1 1s82ms 1s82ms 15 3 5s342ms 1s780ms 16 2 4s526ms 2s263ms 18 3 9s321ms 3s107ms 20 2 8s891ms 4s445ms 21 2 8s79ms 4s39ms 22 1 2s748ms 2s748ms Feb 28 01 1 1s551ms 1s551ms 03 2 59s161ms 29s580ms 05 2 9s107ms 4s553ms 06 2 8s627ms 4s313ms 07 1 2s214ms 2s214ms 09 1 1s854ms 1s854ms 11 1 2s614ms 2s614ms 12 2 6s358ms 3s179ms 13 2 6s822ms 3s411ms 16 1 4s883ms 4s883ms 17 3 17s987ms 5s995ms 18 5 8s887ms 1s777ms 19 2 8s634ms 4s317ms 20 2 3s984ms 1s992ms 21 4 8s234ms 2s58ms 23 1 1s442ms 1s442ms Mar 01 00 1 1s503ms 1s503ms 02 1 5s52ms 5s52ms 03 2 6s920ms 3s460ms 04 4 40s389ms 10s97ms 05 1 1s694ms 1s694ms 07 3 11s878ms 3s959ms 08 1 2s369ms 2s369ms 11 4 9s616ms 2s404ms 12 1 2s88ms 2s88ms 13 3 21s26ms 7s8ms 14 2 8s904ms 4s452ms 15 1 1s461ms 1s461ms 17 2 5s339ms 2s669ms 18 1 1s451ms 1s451ms 19 2 6s81ms 3s40ms 20 1 1s622ms 1s622ms 22 2 6s465ms 3s232ms 23 1 2s737ms 2s737ms [ User: pubeu - Total duration: 3m6s - Times executed: 43 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081644') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 8976650;
Date: 2025-02-28 03:06:53 Duration: 57s2ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086420') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 6331850;
Date: 2025-02-27 11:55:04 Duration: 43s147ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3880250;
Date: 2025-02-27 08:35:38 Duration: 24s375ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 13h5m36s 13h5m36s 13h5m36s 1 13h5m36s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Feb 27 08 1 13h5m36s 13h5m36s -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'NEOPLASMS' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2025-02-27 08:39:24 Duration: 13h5m36s Bind query: yes
2 2h5m7s 2h5m7s 2h5m7s 1 2h5m7s select pub2.maint_term_derive_data ();Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Feb 27 23 1 2h5m7s 2h5m7s -
select pub2.maint_term_derive_data ();
Date: 2025-02-27 23:27:10 Duration: 2h5m7s Bind query: yes
3 1h45m57s 1h45m57s 1h45m57s 1 1h45m57s select pub2.maint_gene_chem_ref_gene_form_refresh ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Feb 27 19 1 1h45m57s 1h45m57s -
select pub2.maint_gene_chem_ref_gene_form_refresh ();
Date: 2025-02-27 19:22:03 Duration: 1h45m57s Bind query: yes
4 1h1m46s 1h1m46s 1h1m46s 1 1h1m46s select maint_term_derive_nm_fts ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Feb 27 20 1 1h1m46s 1h1m46s -
SELECT maint_term_derive_nm_fts ();
Date: 2025-02-27 20:26:38 Duration: 1h1m46s Bind query: yes
5 49m15s 49m15s 49m15s 1 49m15s vacuum full analyze;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Feb 27 21 1 49m15s 49m15s -
VACUUM FULL ANALYZE;
Date: 2025-02-27 21:21:37 Duration: 49m15s Bind query: yes
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VACUUM FULL ANALYZE;
Date: 2025-02-27 20:32:30 Duration: 0ms
6 45m58s 45m58s 45m58s 1 45m58s select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.object_type where cd = ?), ( select current_date) from pub2.gene_chem_reference gcr, pub2.gene_go_annot gga, pub2.phenotype_term_reference ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.gene_chem_reference_axn where action_degree_type_nm = ?);Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Feb 27 13 1 45m58s 45m58s -
select distinct gga.go_term_id, gcr.chem_id, ptr.term_object_type_id, gga.gene_id, ( select id from pub2.OBJECT_TYPE where cd = 'gene'), ( select current_date) from pub2.GENE_CHEM_REFERENCE gcr, pub2.GENE_GO_ANNOT gga, pub2.PHENOTYPE_TERM_REFERENCE ptr where gcr.gene_id = gga.gene_id and gcr.chem_id = ptr.term_id and gga.go_term_id = ptr.phenotype_id and gcr.id not in ( select gene_chem_reference_id from pub2.GENE_CHEM_REFERENCE_AXN where action_degree_type_nm = 'does not affect');
Date: 2025-02-27 13:42:47 Duration: 45m58s Bind query: yes
7 24m51s 25m43s 25m17s 7 2h56m59s select maint_query_logs_archive ();Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Feb 23 00 1 24m51s 24m51s Feb 24 00 1 24m54s 24m54s Feb 25 00 1 25m10s 25m10s Feb 26 00 1 25m41s 25m41s Feb 27 00 1 25m13s 25m13s Feb 28 00 1 25m43s 25m43s Mar 01 00 1 25m25s 25m25s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-02-28 00:25:45 Duration: 25m43s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-02-26 00:25:42 Duration: 25m41s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-03-01 00:25:26 Duration: 25m25s
8 1s231ms 18m35s 1m34s 512 13h26m9s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Feb 23 00 5 6m35s 1m19s 01 6 12s585ms 2s97ms 02 5 25m55s 5m11s 03 3 4m12s 1m24s 04 6 29m5s 4m50s 05 1 1s663ms 1s663ms 06 3 2m12s 44s20ms 08 5 10m51s 2m10s 09 2 5s83ms 2s541ms 10 6 5m28s 54s770ms 11 2 3s803ms 1s901ms 12 1 4m22s 4m22s 13 1 1s488ms 1s488ms 14 2 4s694ms 2s347ms 15 2 3s211ms 1s605ms 16 1 1s802ms 1s802ms 18 1 3s269ms 3s269ms 19 3 4m52s 1m37s 21 2 3m29s 1m44s 22 2 4s911ms 2s455ms 23 3 7s713ms 2s571ms Feb 24 00 2 18m37s 9m18s 01 1 1s764ms 1s764ms 02 3 5s456ms 1s818ms 03 1 1s600ms 1s600ms 04 2 3s982ms 1s991ms 05 1 3s123ms 3s123ms 07 1 3s255ms 3s255ms 08 1 2s404ms 2s404ms 09 3 5s618ms 1s872ms 10 1 1s630ms 1s630ms 11 1 1s622ms 1s622ms 12 2 6s499ms 3s249ms 14 2 3m14s 1m37s 16 3 5s102ms 1s700ms 17 4 7m54s 1m58s 18 2 4m7s 2m3s 19 4 5m42s 1m25s 20 2 3s555ms 1s777ms 21 2 4m46s 2m23s 22 5 8s248ms 1s649ms 23 3 7m2s 2m20s Feb 25 00 5 7m22s 1m28s 01 4 4m36s 1m9s 02 5 11s817ms 2s363ms 03 5 17m59s 3m35s 04 8 17s28ms 2s128ms 05 11 11m58s 1m5s 06 6 12s30ms 2s5ms 07 6 6m27s 1m4s 08 8 3m17s 24s674ms 09 16 33m42s 2m6s 10 4 7m37s 1m54s 11 9 3m50s 25s632ms 12 7 11m17s 1m36s 13 4 3m23s 50s817ms 14 4 8m19s 2m4s 15 7 14s149ms 2s21ms 16 13 18m51s 1m27s 17 12 14m22s 1m11s 18 6 2m3s 20s582ms 19 8 15m21s 1m55s 20 5 12m43s 2m32s 21 12 8m6s 40s565ms 22 8 23m33s 2m56s 23 7 18m45s 2m40s Feb 26 00 7 20m44s 2m57s 01 4 8s252ms 2s63ms 05 4 6m41s 1m40s 06 11 9m 49s96ms 07 5 2m52s 34s501ms 08 7 6m12s 53s186ms 09 6 6m22s 1m3s 10 11 18m6s 1m38s 11 8 7m39s 57s442ms 12 3 5s531ms 1s843ms 13 9 9m24s 1m2s 14 4 1m18s 19s590ms 15 2 4s267ms 2s133ms 16 1 5m2s 5m2s 17 2 17m54s 8m57s 22 1 1s553ms 1s553ms Feb 27 00 1 1s676ms 1s676ms 03 1 3s223ms 3s223ms 04 1 2s103ms 2s103ms 05 3 11m42s 3m54s 06 1 11m33s 11m33s 08 3 10m25s 3m28s 09 1 4m52s 4m52s 11 2 17m58s 8m59s 12 2 23m17s 11m38s 13 4 2m38s 39s588ms 14 1 17m52s 17m52s 16 2 2m9s 1m4s 17 3 16s539ms 5s513ms 18 2 4s13ms 2s6ms 19 1 3s621ms 3s621ms 20 1 3s521ms 3s521ms 21 4 3m1s 45s379ms 22 3 3m18s 1m6s 23 2 3s222ms 1s611ms Feb 28 00 3 7m37s 2m32s 01 1 2s158ms 2s158ms 02 3 13m22s 4m27s 03 2 1m48s 54s225ms 04 1 1s611ms 1s611ms 05 1 1s454ms 1s454ms 06 2 5s66ms 2s533ms 07 2 4s95ms 2s47ms 08 1 1s806ms 1s806ms 09 1 1s770ms 1s770ms 10 3 5m26s 1m48s 11 2 4m49s 2m24s 12 3 7s4ms 2s334ms 13 3 7s165ms 2s388ms 14 2 6m29s 3m14s 15 3 5s30ms 1s676ms 16 1 1s575ms 1s575ms 17 3 18m33s 6m11s 18 3 5s499ms 1s833ms 19 1 1s458ms 1s458ms 20 2 6s666ms 3s333ms 21 3 4s934ms 1s644ms 22 1 1s498ms 1s498ms 23 3 4s788ms 1s596ms Mar 01 00 3 5m24s 1m48s 01 1 3s213ms 3s213ms 02 2 4s896ms 2s448ms 03 1 1s708ms 1s708ms 04 4 7s537ms 1s884ms 05 5 17m58s 3m35s 06 1 17m48s 17m48s 07 1 2s444ms 2s444ms 08 2 4s641ms 2s320ms 09 2 3s368ms 1s684ms 10 2 21m5s 10m32s 11 1 1s531ms 1s531ms 12 1 3s263ms 3s263ms 15 1 1s584ms 1s584ms 16 2 5s31ms 2s515ms 17 3 22m36s 7m32s 18 1 5m2s 5m2s 19 2 17m55s 8m57s 21 3 4m16s 1m25s 22 11 28m8s 2m33s 23 2 3s531ms 1s765ms [ User: pubeu - Total duration: 3h15m14s - Times executed: 111 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-24 00:24:06 Duration: 18m35s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-02-28 17:07:48 Duration: 18m29s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1245892') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-03-01 10:56:25 Duration: 18m11s Bind query: yes
9 1s144ms 6m55s 38s902ms 74 47m58s select * from pgbulkload.pg_bulkload (?);Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Feb 26 13 14 2m11s 9s372ms 14 17 12m31s 44s230ms 16 9 8m42s 58s41ms Feb 27 11 6 1m10s 11s770ms 13 3 8m12s 2m44s 14 4 7m10s 1m47s 15 14 4m3s 17s367ms 16 7 3m57s 33s907ms [ User: load - Total duration: 14m42s - Times executed: 25 ]
[ Application: pg_bulkload - Total duration: 14m42s - Times executed: 25 ]
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.GENE_DISEASE_REFERENCE,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.log,parse-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/indirectAssociation/geneDiseaseRef.txt.DUPE}');
Date: 2025-02-27 13:54:42 Duration: 6m55s Database: ctdprd51 User: load Application: pg_bulkload Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=pub2.DAG_PATH,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.log,parse-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/pub/dag/dagPath.txt.DUPE}');
Date: 2025-02-27 14:25:51 Duration: 5m20s Bind query: yes
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SELECT * FROM pgbulkload.pg_bulkload ('{TABLE=edit.DB_LINK,TYPE=CSV,DELIMITER=|,"ESCAPE=\\",PARSE_ERRORS=0,DUPLICATE_ERRORS=0,OFFSET=1,VERBOSE=true,infile=stdin,logfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.log,parse-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.BAD,duplicate-badfile=/home/load/ctdLoadData/voc/gene/output/dbLink.txt.DUPE}');
Date: 2025-02-26 14:02:25 Duration: 4m20s Bind query: yes
10 4s217ms 34m25s 34s754ms 68 39m23s select g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(r.acc_txt, ? order by r.acc_txt) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id group by g.nm, g.acc_txt, d.nm, d.acc_db_cd || ? || d.acc_txt, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ? order by a.action_type_nm) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by g.nm, d.nm;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Feb 28 11 9 35m 3m53s 12 59 4m22s 4s453ms [ User: qaeu - Total duration: 34m25s - Times executed: 1 ]
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-02-28 11:57:37 Duration: 34m25s Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-02-28 12:04:18 Duration: 6s146ms Bind query: yes
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SELECT /* AllGDRelationsDAO */ g.nm "GeneSymbol", g.acc_txt "GeneID", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(r.acc_txt, '|' ORDER BY r.acc_txt) "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id GROUP BY g.nm, g.acc_txt, d.nm, d.acc_db_cd || ':' || d.acc_txt, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|' ORDER BY a.action_type_nm) FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY g.nm, d.nm;
Date: 2025-02-28 12:17:38 Duration: 5s651ms Bind query: yes
11 1s957ms 3m32s 32s34ms 69 36m50s select r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refacc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, count(*) over () fullrowcount from reference r where r.id in ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?)) order by r.sort_txt limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Feb 23 03 2 2m9s 1m4s 10 1 1m11s 1m11s 16 1 2s772ms 2s772ms 23 4 1m25s 21s291ms Feb 24 02 2 4s346ms 2s173ms 05 1 32s357ms 32s357ms 14 1 1m23s 1m23s 15 1 37s816ms 37s816ms Feb 25 04 1 1m2s 1m2s 08 1 40s800ms 40s800ms 11 1 2s275ms 2s275ms 14 1 2s561ms 2s561ms Feb 26 07 1 2s823ms 2s823ms 21 1 2s634ms 2s634ms Feb 27 03 1 2s937ms 2s937ms 08 1 3m19s 3m19s 11 2 1m4s 32s373ms 18 1 2s248ms 2s248ms 19 1 1m28s 1m28s 20 1 41s494ms 41s494ms 22 1 2s170ms 2s170ms Feb 28 01 1 2s178ms 2s178ms 03 1 2s107ms 2s107ms 04 1 38s38ms 38s38ms 06 3 52s657ms 17s552ms 10 2 1m34s 47s145ms 11 1 2s301ms 2s301ms 12 1 31s692ms 31s692ms 14 1 1m27s 1m27s 16 1 36s581ms 36s581ms 17 4 4m12s 1m3s 18 2 1m2s 31s109ms 19 4 1m34s 23s552ms 20 1 2s209ms 2s209ms 21 2 34s814ms 17s407ms 23 1 2s434ms 2s434ms Mar 01 01 1 29s412ms 29s412ms 04 1 2s739ms 2s739ms 05 1 34s231ms 34s231ms 06 1 2s56ms 2s56ms 12 2 4s426ms 2s213ms 13 1 1s965ms 1s965ms 17 1 1s957ms 1s957ms 18 1 2s778ms 2s778ms 19 1 1s970ms 1s970ms 20 1 2s347ms 2s347ms 22 5 6m9s 1m13s [ User: pubeu - Total duration: 10m53s - Times executed: 18 ]
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1254019')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-03-01 22:23:42 Duration: 3m32s Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1343984')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-02-27 08:36:18 Duration: 3m19s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* RefsDAO */ r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.acc_txt refAcc, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, r.has_exposures, COUNT(*) OVER () fullRowCount FROM reference r WHERE r.id IN ( select reference_id from term_reference where term_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1276726')) ORDER BY r.sort_txt LIMIT 50;
Date: 2025-02-27 19:41:16 Duration: 1m28s Database: ctdprd51 User: pubeu Bind query: yes
12 1s5ms 1m7s 9s401ms 219 34m18s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Feb 23 02 1 1s958ms 1s958ms 07 10 15s50ms 1s505ms 08 5 2m17s 27s454ms 11 1 26s92ms 26s92ms 18 1 1s142ms 1s142ms Feb 24 01 1 15s173ms 15s173ms 04 1 1s637ms 1s637ms 07 2 3s424ms 1s712ms 20 1 15s43ms 15s43ms 21 1 1s167ms 1s167ms 22 1 5s382ms 5s382ms Feb 25 02 1 4s530ms 4s530ms 04 2 3s362ms 1s681ms 11 1 1s79ms 1s79ms 13 1 3s361ms 3s361ms 16 1 4s780ms 4s780ms 18 2 5s703ms 2s851ms 20 1 2s598ms 2s598ms 22 2 3s763ms 1s881ms 23 9 13s704ms 1s522ms Feb 26 00 1 2s42ms 2s42ms 01 2 2s137ms 1s68ms 02 4 2m9s 32s449ms 05 1 17s610ms 17s610ms 06 1 4s17ms 4s17ms 07 3 9s561ms 3s187ms 08 31 4m10s 8s81ms 09 12 1m44s 8s704ms 10 1 2s449ms 2s449ms 18 3 36s747ms 12s249ms 20 1 15s608ms 15s608ms 21 17 19s146ms 1s126ms 22 8 11s168ms 1s396ms 23 2 53s403ms 26s701ms Feb 27 00 9 59s569ms 6s618ms 03 3 34s355ms 11s451ms 09 1 29s774ms 29s774ms 10 1 26s365ms 26s365ms 12 1 1s197ms 1s197ms 13 2 47s379ms 23s689ms 14 1 1s280ms 1s280ms 15 2 1m32s 46s139ms 16 5 3m6s 37s278ms 18 1 20s367ms 20s367ms 19 1 15s466ms 15s466ms 20 1 1s253ms 1s253ms 23 1 1s74ms 1s74ms Feb 28 00 3 34s723ms 11s574ms 02 2 16s515ms 8s257ms 03 1 1s17ms 1s17ms 04 1 14s854ms 14s854ms 06 2 2s490ms 1s245ms 07 1 2s514ms 2s514ms 08 2 6s805ms 3s402ms 09 1 15s675ms 15s675ms 11 1 20s681ms 20s681ms 12 1 3s6ms 3s6ms 13 2 8s417ms 4s208ms 15 2 21s149ms 10s574ms 17 1 9s367ms 9s367ms 19 1 11s488ms 11s488ms 21 7 11s463ms 1s637ms 23 1 1s119ms 1s119ms Mar 01 00 1 1s467ms 1s467ms 02 1 15s241ms 15s241ms 04 1 2s111ms 2s111ms 05 2 1m27s 43s540ms 07 5 1m13s 14s683ms 08 1 1s684ms 1s684ms 09 2 5s123ms 2s561ms 10 3 1m10s 23s500ms 11 3 28s631ms 9s543ms 17 1 1s873ms 1s873ms 18 1 1s108ms 1s108ms 19 1 16s251ms 16s251ms 21 5 1m56s 23s303ms 23 2 14s912ms 7s456ms [ User: pubeu - Total duration: 10m20s - Times executed: 74 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081644') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-03-01 05:43:10 Duration: 1m7s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-02-26 02:18:51 Duration: 50s556ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086420') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-02-27 16:53:44 Duration: 49s386ms Bind query: yes
13 1s11ms 28s141ms 6s671ms 576 1h4m2s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Feb 23 00 7 47s431ms 6s775ms 01 3 35s828ms 11s942ms 02 7 33s613ms 4s801ms 03 4 26s873ms 6s718ms 04 2 24s858ms 12s429ms 05 3 13s291ms 4s430ms 06 6 20s659ms 3s443ms 07 2 5s784ms 2s892ms 08 8 1m43s 12s954ms 09 5 36s48ms 7s209ms 10 4 11s398ms 2s849ms 11 2 6s105ms 3s52ms 12 2 38s54ms 19s27ms 13 4 35s567ms 8s891ms 14 1 3s905ms 3s905ms 15 2 11s282ms 5s641ms 16 1 3s816ms 3s816ms 17 1 1s905ms 1s905ms 20 2 22s745ms 11s372ms 21 4 18s960ms 4s740ms 22 1 11s284ms 11s284ms 23 6 16s696ms 2s782ms Feb 24 00 3 35s423ms 11s807ms 01 3 57s550ms 19s183ms 02 3 22s466ms 7s488ms 03 1 3s422ms 3s422ms 04 2 4s861ms 2s430ms 05 1 3s933ms 3s933ms 06 1 1s642ms 1s642ms 07 3 22s403ms 7s467ms 08 2 2s859ms 1s429ms 09 1 1s418ms 1s418ms 10 2 23s496ms 11s748ms 11 4 28s795ms 7s198ms 13 3 4s265ms 1s421ms 14 3 5s206ms 1s735ms 15 2 4s617ms 2s308ms 16 4 43s498ms 10s874ms 17 2 30s981ms 15s490ms 18 3 36s159ms 12s53ms 20 2 21s464ms 10s732ms 21 4 32s28ms 8s7ms 22 5 12s874ms 2s574ms 23 3 6s235ms 2s78ms Feb 25 00 4 8s88ms 2s22ms 01 12 1m27s 7s284ms 02 6 49s589ms 8s264ms 03 7 34s820ms 4s974ms 04 10 20s238ms 2s23ms 05 7 1m12s 10s346ms 06 5 29s 5s800ms 07 4 14s444ms 3s611ms 08 11 1m2s 5s697ms 09 5 15s568ms 3s113ms 10 6 31s725ms 5s287ms 11 7 21s367ms 3s52ms 12 2 24s574ms 12s287ms 13 7 50s601ms 7s228ms 14 9 47s691ms 5s299ms 15 5 10s143ms 2s28ms 16 8 1m26s 10s789ms 17 3 6s286ms 2s95ms 18 4 28s308ms 7s77ms 19 8 15s985ms 1s998ms 20 9 48s276ms 5s364ms 21 8 50s767ms 6s345ms 22 7 52s954ms 7s564ms 23 14 1m32s 6s631ms Feb 26 00 11 45s711ms 4s155ms 01 6 59s175ms 9s862ms 02 5 29s904ms 5s980ms 03 1 24s16ms 24s16ms 05 2 11s441ms 5s720ms 06 5 10s143ms 2s28ms 07 3 5s982ms 1s994ms 08 7 53s974ms 7s710ms 09 7 51s699ms 7s385ms 10 7 14s834ms 2s119ms 11 3 4s825ms 1s608ms 12 3 33s764ms 11s254ms 13 6 1m12s 12s105ms 14 7 57s411ms 8s201ms 15 3 59s632ms 19s877ms 17 1 3s988ms 3s988ms 20 2 15s705ms 7s852ms Feb 27 01 2 4s837ms 2s418ms 02 2 8s610ms 4s305ms 04 1 1s384ms 1s384ms 08 4 18s237ms 4s559ms 11 4 52s668ms 13s167ms 13 2 34s249ms 17s124ms 14 5 55s988ms 11s197ms 15 3 31s268ms 10s422ms 16 2 29s482ms 14s741ms 17 3 43s615ms 14s538ms 18 3 9s122ms 3s40ms 19 6 47s960ms 7s993ms 20 1 8s845ms 8s845ms 21 2 26s841ms 13s420ms 22 4 21s466ms 5s366ms 23 3 46s804ms 15s601ms Feb 28 00 2 8s48ms 4s24ms 01 2 11s568ms 5s784ms 02 2 6s99ms 3s49ms 03 10 38s558ms 3s855ms 04 4 9s674ms 2s418ms 05 3 3s937ms 1s312ms 06 4 27s556ms 6s889ms 07 2 23s521ms 11s760ms 08 5 58s272ms 11s654ms 09 3 11s946ms 3s982ms 10 4 50s881ms 12s720ms 11 4 33s600ms 8s400ms 12 2 12s335ms 6s167ms 13 1 3s951ms 3s951ms 14 2 11s814ms 5s907ms 15 2 9s728ms 4s864ms 17 1 4s443ms 4s443ms 18 1 22s470ms 22s470ms 19 6 20s2ms 3s333ms 20 5 9s756ms 1s951ms 21 2 10s931ms 5s465ms 22 4 54s898ms 13s724ms 23 2 4s699ms 2s349ms Mar 01 00 2 2s654ms 1s327ms 01 4 30s548ms 7s637ms 02 1 1s341ms 1s341ms 03 3 28s397ms 9s465ms 04 5 41s376ms 8s275ms 05 6 48s672ms 8s112ms 06 3 27s118ms 9s39ms 07 1 1s96ms 1s96ms 08 1 1s77ms 1s77ms 09 1 3s653ms 3s653ms 10 2 11s986ms 5s993ms 11 4 46s505ms 11s626ms 12 3 46s405ms 15s468ms 13 1 10s322ms 10s322ms 14 1 7s890ms 7s890ms 15 3 10s408ms 3s469ms 17 3 31s518ms 10s506ms 18 4 23s683ms 5s920ms 19 3 6s512ms 2s170ms 20 2 4s796ms 2s398ms 21 3 5s160ms 1s720ms 22 16 1m5s 4s95ms 23 3 43s880ms 14s626ms [ User: pubeu - Total duration: 18m57s - Times executed: 153 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-27 16:47:59 Duration: 28s141ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-27 17:36:39 Duration: 27s681ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1222080') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-02-28 11:52:58 Duration: 27s104ms Database: ctdprd51 User: pubeu Bind query: yes
14 1s3ms 20s5ms 5s772ms 421 40m30s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Feb 23 00 1 4s501ms 4s501ms 01 1 1s572ms 1s572ms 02 3 26s256ms 8s752ms 03 3 33s117ms 11s39ms 04 5 13s657ms 2s731ms 05 4 13s813ms 3s453ms 06 3 31s448ms 10s482ms 07 3 37s377ms 12s459ms 08 4 9s562ms 2s390ms 09 5 16s647ms 3s329ms 10 3 29s937ms 9s979ms 11 4 12s294ms 3s73ms 12 2 4s835ms 2s417ms 13 2 7s913ms 3s956ms 16 1 1s43ms 1s43ms 18 1 2s483ms 2s483ms 19 1 10s606ms 10s606ms 20 3 18s855ms 6s285ms 21 3 14s638ms 4s879ms 22 2 6s615ms 3s307ms 23 2 2s605ms 1s302ms Feb 24 00 3 20s90ms 6s696ms 01 5 45s333ms 9s66ms 02 5 24s814ms 4s962ms 03 3 10s209ms 3s403ms 06 2 6s432ms 3s216ms 08 2 21s551ms 10s775ms 09 3 17s753ms 5s917ms 10 1 1s11ms 1s11ms 11 2 33s915ms 16s957ms 12 3 13s226ms 4s408ms 13 2 9s375ms 4s687ms 14 3 8s110ms 2s703ms 15 1 5s289ms 5s289ms 16 2 16s931ms 8s465ms 17 3 11s130ms 3s710ms 18 4 11s903ms 2s975ms 19 3 36s95ms 12s31ms 20 5 13s334ms 2s666ms 21 2 21s513ms 10s756ms 22 1 15s691ms 15s691ms 23 7 25s262ms 3s608ms Feb 25 00 3 19s88ms 6s362ms 01 3 5s614ms 1s871ms 02 5 11s39ms 2s207ms 03 1 4s160ms 4s160ms 04 4 14s230ms 3s557ms 05 10 1m30s 9s48ms 06 4 26s469ms 6s617ms 07 3 20s633ms 6s877ms 08 5 33s763ms 6s752ms 09 10 1m13s 7s376ms 10 5 54s491ms 10s898ms 11 4 34s654ms 8s663ms 12 8 52s244ms 6s530ms 13 5 12s416ms 2s483ms 14 4 30s971ms 7s742ms 15 2 2s395ms 1s197ms 16 8 49s266ms 6s158ms 17 5 45s789ms 9s157ms 18 1 1s761ms 1s761ms 19 5 20s354ms 4s70ms 20 12 52s862ms 4s405ms 21 4 32s738ms 8s184ms 22 4 15s210ms 3s802ms 23 6 22s523ms 3s753ms Feb 26 00 6 27s960ms 4s660ms 01 2 32s838ms 16s419ms 02 4 36s647ms 9s161ms 05 2 18s683ms 9s341ms 06 6 20s910ms 3s485ms 07 4 11s432ms 2s858ms 08 6 29s962ms 4s993ms 09 2 5s902ms 2s951ms 10 3 3s491ms 1s163ms 11 10 59s241ms 5s924ms 12 6 46s24ms 7s670ms 13 4 12s875ms 3s218ms 14 4 6s101ms 1s525ms 15 3 7s68ms 2s356ms 16 1 15s895ms 15s895ms Feb 27 02 3 14s492ms 4s830ms 04 1 1s176ms 1s176ms 07 1 1s164ms 1s164ms 08 1 1s906ms 1s906ms 11 1 16s118ms 16s118ms 12 1 5s542ms 5s542ms 13 2 4s332ms 2s166ms 14 2 18s785ms 9s392ms 15 2 33s565ms 16s782ms 17 5 43s198ms 8s639ms 18 2 17s396ms 8s698ms 19 1 2s419ms 2s419ms 20 1 16s809ms 16s809ms 22 1 2s895ms 2s895ms 23 4 38s497ms 9s624ms Feb 28 00 1 1s30ms 1s30ms 01 1 3s480ms 3s480ms 02 2 4s602ms 2s301ms 03 2 17s469ms 8s734ms 04 2 4s916ms 2s458ms 05 2 5s628ms 2s814ms 06 1 1s49ms 1s49ms 07 5 30s179ms 6s35ms 08 1 5s844ms 5s844ms 09 7 21s804ms 3s114ms 10 3 28s328ms 9s442ms 11 1 1s89ms 1s89ms 12 2 2s172ms 1s86ms 13 2 19s614ms 9s807ms 14 1 16s51ms 16s51ms 16 4 37s219ms 9s304ms 17 1 1s167ms 1s167ms 18 5 39s222ms 7s844ms 19 2 5s629ms 2s814ms 20 1 2s941ms 2s941ms 21 5 25s82ms 5s16ms 22 2 18s621ms 9s310ms 23 3 20s598ms 6s866ms Mar 01 00 4 21s373ms 5s343ms 02 1 1s18ms 1s18ms 03 4 21s171ms 5s292ms 04 1 1s44ms 1s44ms 06 3 13s500ms 4s500ms 07 1 2s480ms 2s480ms 08 2 10s852ms 5s426ms 09 3 18s179ms 6s59ms 12 2 6s657ms 3s328ms 14 3 6s460ms 2s153ms 15 3 14s760ms 4s920ms 16 1 1s29ms 1s29ms 19 2 3s228ms 1s614ms 20 1 16s199ms 16s199ms 21 1 16s267ms 16s267ms 22 3 13s250ms 4s416ms [ User: pubeu - Total duration: 8m45s - Times executed: 94 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-28 10:15:02 Duration: 20s5ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-27 17:36:31 Duration: 19s698ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1222080'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-27 23:35:44 Duration: 17s878ms Database: ctdprd51 User: pubeu Bind query: yes
15 1s 7s284ms 4s380ms 486 35m28s select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Feb 23 00 2 6s203ms 3s101ms 01 2 6s92ms 3s46ms 02 2 10s681ms 5s340ms 03 1 5s377ms 5s377ms 04 2 2s14ms 1s7ms 07 4 20s461ms 5s115ms 09 5 17s363ms 3s472ms 10 3 15s286ms 5s95ms 11 2 10s603ms 5s301ms 12 1 4s702ms 4s702ms 14 5 24s67ms 4s813ms 15 1 5s382ms 5s382ms 18 1 4s938ms 4s938ms 19 1 4s680ms 4s680ms 20 2 2s172ms 1s86ms 21 2 9s627ms 4s813ms 22 4 11s899ms 2s974ms 23 10 44s711ms 4s471ms Feb 24 00 6 34s993ms 5s832ms 02 2 9s416ms 4s708ms 04 1 4s719ms 4s719ms 06 1 5s214ms 5s214ms 07 1 5s371ms 5s371ms 08 4 11s637ms 2s909ms 10 2 6s220ms 3s110ms 11 1 4s802ms 4s802ms 12 1 4s850ms 4s850ms 13 7 36s931ms 5s275ms 14 1 4s887ms 4s887ms 15 1 5s14ms 5s14ms 17 9 40s736ms 4s526ms 19 1 5s357ms 5s357ms 20 2 9s921ms 4s960ms 21 1 5s284ms 5s284ms 22 1 4s730ms 4s730ms 23 5 23s844ms 4s768ms Feb 25 00 7 27s601ms 3s943ms 02 1 5s446ms 5s446ms 03 2 6s617ms 3s308ms 04 2 10s565ms 5s282ms 05 3 12s452ms 4s150ms 06 1 4s944ms 4s944ms 07 2 10s502ms 5s251ms 08 2 10s917ms 5s458ms 10 4 16s246ms 4s61ms 11 4 8s254ms 2s63ms 12 2 6s857ms 3s428ms 13 3 11s484ms 3s828ms 14 3 15s803ms 5s267ms 15 2 10s264ms 5s132ms 17 2 6s415ms 3s207ms 18 8 46s710ms 5s838ms 19 3 11s664ms 3s888ms 20 1 1s26ms 1s26ms 21 2 6s941ms 3s470ms 22 3 11s662ms 3s887ms 23 4 16s966ms 4s241ms Feb 26 00 2 9s890ms 4s945ms 01 9 34s798ms 3s866ms 05 1 5s44ms 5s44ms 07 3 11s853ms 3s951ms 08 1 6s961ms 6s961ms 09 1 7s249ms 7s249ms 10 2 12s344ms 6s172ms 11 5 19s617ms 3s923ms 12 1 5s725ms 5s725ms 13 1 6s585ms 6s585ms 14 1 6s674ms 6s674ms 15 1 5s364ms 5s364ms 17 1 1s76ms 1s76ms 19 1 5s867ms 5s867ms 20 2 12s112ms 6s56ms 23 10 42s736ms 4s273ms Feb 27 00 1 1s68ms 1s68ms 01 1 1s89ms 1s89ms 02 3 17s2ms 5s667ms 03 2 7s248ms 3s624ms 04 1 5s10ms 5s10ms 06 1 5s896ms 5s896ms 07 1 6s200ms 6s200ms 08 1 1s68ms 1s68ms 11 5 13s810ms 2s762ms 12 10 33s889ms 3s388ms 13 5 17s391ms 3s478ms 14 2 6s961ms 3s480ms 15 4 24s584ms 6s146ms 16 3 17s189ms 5s729ms 17 3 15s828ms 5s276ms 18 3 11s707ms 3s902ms 19 1 5s233ms 5s233ms 20 3 13s409ms 4s469ms 21 5 19s965ms 3s993ms 22 9 42s306ms 4s700ms 23 8 36s148ms 4s518ms Feb 28 00 7 37s103ms 5s300ms 01 6 22s2ms 3s667ms 02 3 11s377ms 3s792ms 03 2 10s752ms 5s376ms 04 2 10s475ms 5s237ms 05 12 45s656ms 3s804ms 06 5 23s588ms 4s717ms 07 4 16s469ms 4s117ms 08 2 10s271ms 5s135ms 09 3 11s511ms 3s837ms 10 3 11s442ms 3s814ms 11 6 29s81ms 4s846ms 12 3 16s119ms 5s373ms 13 5 18s617ms 3s723ms 14 4 17s11ms 4s252ms 15 4 21s212ms 5s303ms 16 3 7s177ms 2s392ms 17 11 45s705ms 4s155ms 18 10 43s62ms 4s306ms 19 9 29s841ms 3s315ms 20 1 5s748ms 5s748ms 21 2 10s680ms 5s340ms 22 2 10s484ms 5s242ms 23 5 21s623ms 4s324ms Mar 01 00 9 46s392ms 5s154ms 01 2 6s542ms 3s271ms 02 5 13s330ms 2s666ms 03 1 5s185ms 5s185ms 04 5 26s408ms 5s281ms 06 2 10s479ms 5s239ms 07 3 15s445ms 5s148ms 08 11 49s71ms 4s461ms 09 8 38s334ms 4s791ms 10 3 15s537ms 5s179ms 11 1 1s7ms 1s7ms 12 5 24s600ms 4s920ms 13 2 9s345ms 4s672ms 14 2 9s709ms 4s854ms 15 3 14s320ms 4s773ms 16 3 15s252ms 5s84ms 17 7 22s141ms 3s163ms 18 2 9s605ms 4s802ms 19 1 5s275ms 5s275ms 20 3 12s96ms 4s32ms 21 6 21s387ms 3s564ms 22 13 1m9s 5s328ms 23 3 14s484ms 4s828ms [ User: pubeu - Total duration: 8m31s - Times executed: 108 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1286983' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-03-01 22:16:34 Duration: 7s284ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1316410' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-02-26 09:06:30 Duration: 7s249ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1442752' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-02-27 15:55:30 Duration: 7s63ms Database: ctdprd51 User: pubeu Bind query: yes
16 1s3ms 50s68ms 4s214ms 542 38m4s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where (d.id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Feb 23 06 273 19m1s 4s180ms 07 25 1m37s 3s902ms 20 243 17m19s 4s276ms Feb 27 16 1 6s186ms 6s186ms [ User: pubeu - Total duration: 5m30s - Times executed: 83 ]
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d056486' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2082652) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 06:40:42 Duration: 50s68ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'chemical and drug induced liver injury' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2082652) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 20:32:01 Duration: 49s428ms Bind query: yes
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SELECT /* BatchDiseaseGeneAssnsDAO */ 'mesh:d007674' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE (d.id = 2091673) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2025-02-23 06:50:19 Duration: 23s780ms Bind query: yes
17 3s858ms 6s124ms 4s113ms 327 22m25s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Feb 23 00 1 4s27ms 4s27ms 01 2 8s244ms 4s122ms 04 2 8s261ms 4s130ms 08 2 7s936ms 3s968ms 09 2 8s421ms 4s210ms 10 1 3s951ms 3s951ms 11 1 4s63ms 4s63ms 14 2 8s243ms 4s121ms 15 4 15s781ms 3s945ms 16 4 18s906ms 4s726ms 18 1 3s942ms 3s942ms 19 1 3s944ms 3s944ms 21 1 3s942ms 3s942ms 22 4 15s990ms 3s997ms 23 4 17s297ms 4s324ms Feb 24 00 4 16s196ms 4s49ms 01 2 7s986ms 3s993ms 02 5 19s875ms 3s975ms 03 1 4s35ms 4s35ms 04 4 16s254ms 4s63ms 05 1 3s919ms 3s919ms 06 1 3s928ms 3s928ms 07 1 4s153ms 4s153ms 08 3 12s106ms 4s35ms 09 2 8s34ms 4s17ms 10 3 11s984ms 3s994ms 11 3 11s966ms 3s988ms 12 4 15s925ms 3s981ms 13 2 8s559ms 4s279ms 14 1 4s242ms 4s242ms 15 7 27s986ms 3s998ms 16 1 4s139ms 4s139ms 17 2 8s275ms 4s137ms 20 3 12s351ms 4s117ms 21 1 4s51ms 4s51ms 22 1 3s899ms 3s899ms Feb 25 00 1 4s14ms 4s14ms 02 1 3s894ms 3s894ms 03 4 15s931ms 3s982ms 04 6 24s117ms 4s19ms 05 5 20s137ms 4s27ms 06 3 13s604ms 4s534ms 07 3 12s43ms 4s14ms 08 6 23s914ms 3s985ms 09 3 12s752ms 4s250ms 10 7 28s494ms 4s70ms 12 4 15s800ms 3s950ms 13 3 12s70ms 4s23ms 14 4 16s356ms 4s89ms 15 2 8s265ms 4s132ms 16 1 4s102ms 4s102ms 17 3 12s308ms 4s102ms 18 1 3s998ms 3s998ms 19 3 12s112ms 4s37ms 20 6 26s429ms 4s404ms 22 2 8s166ms 4s83ms 23 3 12s101ms 4s33ms Feb 26 00 1 4s97ms 4s97ms 01 1 4s182ms 4s182ms 02 1 4s292ms 4s292ms 05 1 4s191ms 4s191ms 07 1 4s53ms 4s53ms 08 1 4s295ms 4s295ms 09 6 26s897ms 4s482ms 10 2 8s426ms 4s213ms 12 2 8s484ms 4s242ms 13 1 4s242ms 4s242ms 14 3 12s548ms 4s182ms 15 9 37s158ms 4s128ms 19 2 8s381ms 4s190ms 20 2 8s154ms 4s77ms 21 2 8s282ms 4s141ms 22 1 4s94ms 4s94ms 23 2 8s245ms 4s122ms Feb 27 00 3 12s702ms 4s234ms 01 2 8s223ms 4s111ms 02 6 24s796ms 4s132ms 03 12 48s799ms 4s66ms 04 2 8s450ms 4s225ms 05 3 12s363ms 4s121ms 06 2 8s190ms 4s95ms 07 3 12s62ms 4s20ms 08 4 16s684ms 4s171ms 09 5 20s258ms 4s51ms 10 6 24s887ms 4s147ms 11 6 24s251ms 4s41ms 12 2 8s391ms 4s195ms 14 5 21s341ms 4s268ms 16 1 4s21ms 4s21ms 20 2 8s142ms 4s71ms 21 4 16s749ms 4s187ms 22 1 4s252ms 4s252ms 23 2 8s60ms 4s30ms Feb 28 00 4 16s422ms 4s105ms 01 4 16s239ms 4s59ms 02 6 24s635ms 4s105ms 03 3 12s262ms 4s87ms 05 5 20s541ms 4s108ms 06 1 4s224ms 4s224ms 08 3 12s212ms 4s70ms 09 3 12s371ms 4s123ms 10 1 4s94ms 4s94ms 11 1 4s202ms 4s202ms 12 5 20s736ms 4s147ms 13 1 4s97ms 4s97ms 14 2 7s972ms 3s986ms 15 3 12s51ms 4s17ms 22 1 4s218ms 4s218ms 23 2 8s257ms 4s128ms Mar 01 00 2 8s409ms 4s204ms 02 1 4s389ms 4s389ms 03 1 3s980ms 3s980ms 04 2 8s338ms 4s169ms 05 1 3s995ms 3s995ms 07 1 4s257ms 4s257ms 08 1 4s45ms 4s45ms 10 2 8s149ms 4s74ms 11 3 12s658ms 4s219ms 16 1 4s18ms 4s18ms 19 2 8s273ms 4s136ms 21 1 4s47ms 4s47ms [ User: pubeu - Total duration: 6m - Times executed: 87 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1343984') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1343984') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-02-25 20:37:52 Duration: 6s124ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1267390') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1267390') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-02-23 16:43:40 Duration: 5s407ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1387047') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1387047') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-02-26 09:13:34 Duration: 5s108ms Database: ctdprd51 User: pubeu Bind query: yes
18 1s6ms 57s2ms 3s963ms 144 9m30s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ? offset ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Feb 23 02 1 1s827ms 1s827ms 03 1 2s239ms 2s239ms 06 1 1s6ms 1s6ms 08 2 25s886ms 12s943ms 12 4 9s675ms 2s418ms 14 1 13s669ms 13s669ms 15 1 2s185ms 2s185ms 21 4 4s257ms 1s64ms Feb 24 03 1 1s595ms 1s595ms 04 2 4s406ms 2s203ms 16 1 2s154ms 2s154ms 17 1 2s341ms 2s341ms 18 1 2s671ms 2s671ms 22 1 4s293ms 4s293ms Feb 25 02 2 3s173ms 1s586ms 03 1 1s425ms 1s425ms 04 1 2s69ms 2s69ms 05 1 2s89ms 2s89ms 07 1 2s25ms 2s25ms Feb 26 07 7 11s732ms 1s676ms 08 3 4s683ms 1s561ms 10 2 6s299ms 3s149ms 11 1 2s811ms 2s811ms 12 1 2s321ms 2s321ms 13 1 1s655ms 1s655ms 18 1 1s866ms 1s866ms 20 1 2s149ms 2s149ms 21 1 5s559ms 5s559ms 22 1 5s910ms 5s910ms 23 1 3s443ms 3s443ms Feb 27 00 1 2s252ms 2s252ms 03 3 7s390ms 2s463ms 04 3 8s57ms 2s685ms 06 1 2s775ms 2s775ms 07 4 7s847ms 1s961ms 08 1 24s375ms 24s375ms 10 3 8s460ms 2s820ms 11 1 43s147ms 43s147ms 12 1 1s82ms 1s82ms 15 3 5s342ms 1s780ms 16 2 4s526ms 2s263ms 18 3 9s321ms 3s107ms 20 2 8s891ms 4s445ms 21 2 8s79ms 4s39ms 22 1 2s748ms 2s748ms Feb 28 01 1 1s551ms 1s551ms 03 2 59s161ms 29s580ms 05 2 9s107ms 4s553ms 06 2 8s627ms 4s313ms 07 1 2s214ms 2s214ms 09 1 1s854ms 1s854ms 11 1 2s614ms 2s614ms 12 2 6s358ms 3s179ms 13 2 6s822ms 3s411ms 16 1 4s883ms 4s883ms 17 3 17s987ms 5s995ms 18 5 8s887ms 1s777ms 19 2 8s634ms 4s317ms 20 2 3s984ms 1s992ms 21 4 8s234ms 2s58ms 23 1 1s442ms 1s442ms Mar 01 00 1 1s503ms 1s503ms 02 1 5s52ms 5s52ms 03 2 6s920ms 3s460ms 04 4 40s389ms 10s97ms 05 1 1s694ms 1s694ms 07 3 11s878ms 3s959ms 08 1 2s369ms 2s369ms 11 4 9s616ms 2s404ms 12 1 2s88ms 2s88ms 13 3 21s26ms 7s8ms 14 2 8s904ms 4s452ms 15 1 1s461ms 1s461ms 17 2 5s339ms 2s669ms 18 1 1s451ms 1s451ms 19 2 6s81ms 3s40ms 20 1 1s622ms 1s622ms 22 2 6s465ms 3s232ms 23 1 2s737ms 2s737ms [ User: pubeu - Total duration: 3m6s - Times executed: 43 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2081644') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 8976650;
Date: 2025-02-28 03:06:53 Duration: 57s2ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2086420') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 6331850;
Date: 2025-02-27 11:55:04 Duration: 43s147ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50 OFFSET 3880250;
Date: 2025-02-27 08:35:38 Duration: 24s375ms Bind query: yes
19 1s4ms 12s518ms 3s311ms 984 54m18s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Feb 23 00 3 7s360ms 2s453ms 01 2 3s585ms 1s792ms 02 5 9s266ms 1s853ms 03 6 17s896ms 2s982ms 04 1 5s234ms 5s234ms 05 6 21s921ms 3s653ms 06 2 3s169ms 1s584ms 07 3 5s393ms 1s797ms 08 3 6s266ms 2s88ms 09 4 10s126ms 2s531ms 10 5 22s230ms 4s446ms 11 2 7s838ms 3s919ms 13 2 7s386ms 3s693ms 14 3 11s772ms 3s924ms 15 2 13s928ms 6s964ms 16 1 1s301ms 1s301ms 17 1 2s403ms 2s403ms 19 1 1s178ms 1s178ms 20 1 2s396ms 2s396ms 21 9 26s768ms 2s974ms 22 2 5s121ms 2s560ms 23 9 30s225ms 3s358ms Feb 24 00 9 24s827ms 2s758ms 02 3 5s388ms 1s796ms 03 3 6s151ms 2s50ms 06 1 6s111ms 6s111ms 07 2 4s94ms 2s47ms 08 1 2s459ms 2s459ms 09 2 3s728ms 1s864ms 10 2 8s53ms 4s26ms 11 3 13s942ms 4s647ms 12 7 23s469ms 3s352ms 13 4 10s933ms 2s733ms 14 2 6s426ms 3s213ms 15 2 2s691ms 1s345ms 16 2 8s691ms 4s345ms 17 9 29s873ms 3s319ms 18 4 21s25ms 5s256ms 19 3 10s222ms 3s407ms 20 4 8s341ms 2s85ms 21 5 10s493ms 2s98ms 22 4 13s611ms 3s402ms 23 4 14s464ms 3s616ms Feb 25 00 5 23s750ms 4s750ms 01 3 5s408ms 1s802ms 02 2 4s758ms 2s379ms 03 3 7s572ms 2s524ms 04 4 10s684ms 2s671ms 05 4 8s94ms 2s23ms 06 1 1s42ms 1s42ms 07 2 3s830ms 1s915ms 08 17 54s62ms 3s180ms 09 5 15s289ms 3s57ms 10 4 6s137ms 1s534ms 11 2 4s477ms 2s238ms 12 2 5s568ms 2s784ms 13 3 12s708ms 4s236ms 14 2 5s680ms 2s840ms 15 2 7s89ms 3s544ms 16 2 6s404ms 3s202ms 17 5 24s365ms 4s873ms 18 13 39s265ms 3s20ms 19 4 7s480ms 1s870ms 20 6 18s879ms 3s146ms 21 20 58s335ms 2s916ms 22 7 25s618ms 3s659ms 23 5 9s852ms 1s970ms Feb 26 00 4 17s30ms 4s257ms 01 3 14s685ms 4s895ms 02 3 8s488ms 2s829ms 05 5 14s679ms 2s935ms 06 7 14s299ms 2s42ms 07 8 16s294ms 2s36ms 08 15 40s717ms 2s714ms 09 4 10s16ms 2s504ms 10 8 20s350ms 2s543ms 11 7 21s274ms 3s39ms 12 9 27s448ms 3s49ms 13 5 14s895ms 2s979ms 14 2 7s402ms 3s701ms 15 12 1m 5s61ms 17 3 7s949ms 2s649ms 18 2 8s99ms 4s49ms 19 3 11s677ms 3s892ms 20 2 4s316ms 2s158ms 21 3 10s533ms 3s511ms 22 3 10s959ms 3s653ms 23 4 7s613ms 1s903ms Feb 27 00 5 22s282ms 4s456ms 01 3 5s420ms 1s806ms 02 11 34s730ms 3s157ms 03 7 22s577ms 3s225ms 04 4 14s518ms 3s629ms 05 1 1s160ms 1s160ms 06 6 15s362ms 2s560ms 07 3 6s78ms 2s26ms 08 1 1s255ms 1s255ms 09 1 2s503ms 2s503ms 10 3 3s833ms 1s277ms 11 9 30s943ms 3s438ms 12 7 29s161ms 4s165ms 13 4 11s615ms 2s903ms 14 8 15s952ms 1s994ms 15 15 59s502ms 3s966ms 16 16 39s756ms 2s484ms 17 4 16s429ms 4s107ms 18 16 1m6s 4s126ms 19 9 26s761ms 2s973ms 20 7 22s326ms 3s189ms 21 7 29s688ms 4s241ms 22 9 36s309ms 4s34ms 23 8 26s644ms 3s330ms Feb 28 00 4 10s898ms 2s724ms 01 6 26s413ms 4s402ms 02 9 46s579ms 5s175ms 03 11 35s779ms 3s252ms 04 9 32s507ms 3s611ms 05 10 39s77ms 3s907ms 06 5 13s669ms 2s733ms 07 11 34s18ms 3s92ms 08 8 25s112ms 3s139ms 09 7 17s198ms 2s456ms 10 12 43s853ms 3s654ms 11 13 49s715ms 3s824ms 12 7 21s712ms 3s101ms 13 10 26s59ms 2s605ms 14 8 22s221ms 2s777ms 15 6 31s282ms 5s213ms 16 4 12s543ms 3s135ms 17 15 1m7s 4s495ms 18 7 28s203ms 4s29ms 19 7 26s811ms 3s830ms 20 10 25s629ms 2s562ms 21 3 7s961ms 2s653ms 22 7 21s16ms 3s2ms 23 8 35s526ms 4s440ms Mar 01 00 10 37s830ms 3s783ms 01 14 48s561ms 3s468ms 02 12 42s552ms 3s546ms 03 7 16s168ms 2s309ms 04 9 38s258ms 4s250ms 05 13 57s25ms 4s386ms 06 11 36s835ms 3s348ms 07 11 41s137ms 3s739ms 08 7 25s825ms 3s689ms 09 7 14s424ms 2s60ms 10 9 30s729ms 3s414ms 11 11 34s344ms 3s122ms 12 10 35s797ms 3s579ms 13 6 14s850ms 2s475ms 14 10 33s25ms 3s302ms 15 6 22s892ms 3s815ms 16 12 48s934ms 4s77ms 17 10 45s446ms 4s544ms 18 9 32s937ms 3s659ms 19 9 30s144ms 3s349ms 20 11 42s412ms 3s855ms 21 5 12s599ms 2s519ms 22 18 50s216ms 2s789ms 23 12 49s780ms 4s148ms [ User: pubeu - Total duration: 15m31s - Times executed: 299 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2093721') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-02-26 15:12:10 Duration: 12s518ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2091965') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-03-01 04:50:41 Duration: 12s88ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2091965') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-02-28 18:33:16 Duration: 11s756ms Bind query: yes
20 1s1ms 7s78ms 3s147ms 2,108 1h50m35s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Feb 23 00 23 57s73ms 2s481ms 01 14 45s692ms 3s263ms 02 38 2m1s 3s188ms 03 19 53s885ms 2s836ms 04 27 1m18s 2s923ms 05 16 54s386ms 3s399ms 06 21 1m2s 2s968ms 07 11 30s618ms 2s783ms 08 19 48s611ms 2s558ms 09 21 1m4s 3s56ms 10 31 1m39s 3s214ms 11 20 1m6s 3s301ms 12 14 49s124ms 3s508ms 13 9 21s391ms 2s376ms 14 13 47s890ms 3s683ms 15 8 29s399ms 3s674ms 16 2 12s876ms 6s438ms 17 2 4s929ms 2s464ms 18 4 7s740ms 1s935ms 19 2 9s224ms 4s612ms 20 9 24s595ms 2s732ms 21 12 43s943ms 3s661ms 22 17 51s687ms 3s40ms 23 19 59s704ms 3s142ms Feb 24 00 11 28s64ms 2s551ms 01 15 44s324ms 2s954ms 02 7 17s72ms 2s438ms 03 5 12s370ms 2s474ms 04 7 16s503ms 2s357ms 05 8 17s248ms 2s156ms 06 3 10s295ms 3s431ms 07 4 10s202ms 2s550ms 08 8 27s142ms 3s392ms 09 8 27s941ms 3s492ms 10 8 31s629ms 3s953ms 11 14 49s219ms 3s515ms 12 12 29s561ms 2s463ms 13 9 29s413ms 3s268ms 14 17 53s593ms 3s152ms 15 8 26s174ms 3s271ms 16 9 34s954ms 3s883ms 17 4 9s785ms 2s446ms 18 11 24s33ms 2s184ms 19 11 40s371ms 3s670ms 20 23 1m3s 2s773ms 21 23 1m10s 3s57ms 22 12 40s843ms 3s403ms 23 20 48s245ms 2s412ms Feb 25 00 25 1m32s 3s712ms 01 23 1m20s 3s491ms 02 21 54s792ms 2s609ms 03 30 1m29s 2s979ms 04 31 1m50s 3s579ms 05 28 1m32s 3s315ms 06 20 1m 3s30ms 07 16 43s652ms 2s728ms 08 15 47s387ms 3s159ms 09 41 1m59s 2s912ms 10 23 1m7s 2s936ms 11 18 58s438ms 3s246ms 12 35 1m53s 3s230ms 13 36 1m40s 2s797ms 14 18 1m3s 3s537ms 15 18 54s677ms 3s37ms 16 23 1m5s 2s844ms 17 35 1m57s 3s351ms 18 33 1m48s 3s288ms 19 27 1m41s 3s773ms 20 33 2m5s 3s801ms 21 23 1m5s 2s866ms 22 28 1m46s 3s818ms 23 29 1m45s 3s651ms Feb 26 00 25 1m4s 2s599ms 01 34 1m44s 3s82ms 02 10 36s840ms 3s684ms 05 17 55s901ms 3s288ms 06 23 1m16s 3s322ms 07 25 1m20s 3s229ms 08 18 55s727ms 3s95ms 09 39 2m2s 3s140ms 10 20 1m3s 3s196ms 11 29 1m36s 3s317ms 12 32 1m48s 3s379ms 13 32 1m42s 3s217ms 14 17 51s83ms 3s4ms 15 12 32s944ms 2s745ms 17 1 1s944ms 1s944ms 18 3 11s84ms 3s694ms 19 2 3s946ms 1s973ms 20 2 7s956ms 3s978ms 21 1 3s76ms 3s76ms 23 9 27s528ms 3s58ms Feb 27 00 3 6s981ms 2s327ms 02 2 8s163ms 4s81ms 03 4 14s110ms 3s527ms 05 1 1s837ms 1s837ms 06 1 1s923ms 1s923ms 08 1 6s496ms 6s496ms 09 1 2s59ms 2s59ms 11 5 12s618ms 2s523ms 12 3 19s281ms 6s427ms 13 8 20s499ms 2s562ms 14 9 26s658ms 2s962ms 15 8 21s184ms 2s648ms 16 5 10s132ms 2s26ms 17 4 18s48ms 4s512ms 18 10 34s770ms 3s477ms 19 9 31s455ms 3s495ms 20 11 26s412ms 2s401ms 21 3 9s978ms 3s326ms 22 13 45s45ms 3s465ms 23 15 43s119ms 2s874ms Feb 28 00 14 30s843ms 2s203ms 01 5 16s612ms 3s322ms 02 9 24s625ms 2s736ms 03 13 43s911ms 3s377ms 04 3 11s484ms 3s828ms 05 10 37s376ms 3s737ms 06 6 12s192ms 2s32ms 07 5 14s987ms 2s997ms 08 6 15s886ms 2s647ms 09 8 29s860ms 3s732ms 10 7 19s344ms 2s763ms 11 5 24s780ms 4s956ms 12 7 19s598ms 2s799ms 13 11 25s461ms 2s314ms 14 11 28s926ms 2s629ms 15 11 35s71ms 3s188ms 16 3 15s364ms 5s121ms 17 5 20s953ms 4s190ms 18 20 1m13s 3s671ms 19 7 23s45ms 3s292ms 20 8 32s449ms 4s56ms 21 13 35s164ms 2s704ms 22 7 19s361ms 2s765ms 23 7 28s396ms 4s56ms Mar 01 00 9 30s357ms 3s373ms 01 9 29s943ms 3s327ms 02 8 38s685ms 4s835ms 03 5 14s673ms 2s934ms 04 6 15s12ms 2s502ms 05 6 15s8ms 2s501ms 06 7 20s397ms 2s913ms 07 7 16s795ms 2s399ms 08 9 23s623ms 2s624ms 09 12 32s477ms 2s706ms 10 6 11s460ms 1s910ms 11 6 15s531ms 2s588ms 12 3 14s409ms 4s803ms 13 9 25s413ms 2s823ms 14 7 27s44ms 3s863ms 15 10 39s259ms 3s925ms 16 10 34s484ms 3s448ms 17 8 23s126ms 2s890ms 18 6 26s942ms 4s490ms 19 7 17s672ms 2s524ms 20 8 22s677ms 2s834ms 21 8 22s199ms 2s774ms 22 10 38s455ms 3s845ms 23 7 15s692ms 2s241ms [ User: pubeu - Total duration: 24m57s - Times executed: 467 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-26 09:06:17 Duration: 7s78ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-28 20:39:31 Duration: 7s20ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1399342'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-02-26 08:51:14 Duration: 7s11ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 8s622ms 2 4s311ms 4s311ms 4s311ms update pub2.TERM set has_exposures = true where id in ( select ancestor_object_id from pub2.DAG_PATH where descendant_object_id in ( select distinct s.chem_id from pub2.EXP_STRESSOR s union select distinct e.exp_marker_term_id from pub2.EXP_EVENT e union select distinct e.phenotype_id from pub2.EXP_OUTCOME e union select distinct e.disease_id from pub2.EXP_OUTCOME e union select distinct e.term_id from pub2.EXP_RECEPTOR e) union select distinct e.exp_marker_term_id from pub2.EXP_EVENT e UNION select distinct e.term_id from pub2.EXP_RECEPTOR e where object_type_id = ( select id from pub2.OBJECT_TYPE where cd = 'gene'));Times Reported Time consuming prepare #1
Day Hour Count Duration Avg duration Mar 01 16 2 8s622ms 4s311ms -
update pub2.TERM set has_exposures = true where id in ( select ancestor_object_id from pub2.DAG_PATH where descendant_object_id in ( select distinct s.chem_id from pub2.EXP_STRESSOR s union select distinct e.exp_marker_term_id from pub2.EXP_EVENT e union select distinct e.phenotype_id from pub2.EXP_OUTCOME e union select distinct e.disease_id from pub2.EXP_OUTCOME e union select distinct e.term_id from pub2.EXP_RECEPTOR e) union select distinct e.exp_marker_term_id from pub2.EXP_EVENT e UNION select distinct e.term_id from pub2.EXP_RECEPTOR e where object_type_id = ( select id from pub2.OBJECT_TYPE where cd = 'gene'));
Date: 2025-02-27 16:57:51 Duration: 4s311ms Database: postgres
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 2s532ms 2 1s266ms 1s266ms 1s266ms select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.IXN_AXN i where ptr.ixn_id = i.ixn_id;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Mar 01 16 2 2s532ms 1s266ms -
select distinct ptr.phenotype_id, ptr.term_id, i.action_type_nm, i.action_type_cd, i.action_degree_type_nm, i.action_degree_type_cd from pub2.PHENOTYPE_TERM_REFERENCE ptr, pub2.IXN_AXN i where ptr.ixn_id = i.ixn_id;
Date: 2025-02-27 16:52:55 Duration: 1s266ms Database: postgres
2 0ms 781 0ms 0ms 0ms ;Times Reported Time consuming bind #2
Day Hour Count Duration Avg duration Feb 22 07 1 0ms 0ms 14 1 0ms 0ms Feb 23 00 1 0ms 0ms 02 2 0ms 0ms 03 3 0ms 0ms 07 42 0ms 0ms 08 20 0ms 0ms 09 4 0ms 0ms Feb 24 00 1 0ms 0ms 06 20 0ms 0ms 07 34 0ms 0ms 08 4 0ms 0ms 10 2 0ms 0ms 12 2 0ms 0ms 14 6 0ms 0ms 16 2 0ms 0ms 17 10 0ms 0ms 19 4 0ms 0ms Feb 25 00 3 0ms 0ms 06 18 0ms 0ms 07 28 0ms 0ms 08 24 0ms 0ms 11 38 0ms 0ms 15 4 0ms 0ms 16 22 0ms 0ms 17 20 0ms 0ms Feb 26 00 1 0ms 0ms 06 6 0ms 0ms 07 62 0ms 0ms 08 16 0ms 0ms 10 8 0ms 0ms 11 34 0ms 0ms 12 2 0ms 0ms 16 2 0ms 0ms 19 2 0ms 0ms Feb 27 07 10 0ms 0ms 08 2 0ms 0ms 10 4 0ms 0ms 11 4 0ms 0ms 12 10 0ms 0ms 16 4 0ms 0ms 17 8 0ms 0ms 20 4 0ms 0ms 21 8 0ms 0ms 23 10 0ms 0ms Feb 28 05 6 0ms 0ms 06 69 0ms 0ms 07 18 0ms 0ms 08 24 0ms 0ms 09 33 0ms 0ms 10 24 0ms 0ms 11 24 0ms 0ms 12 48 0ms 0ms 13 18 0ms 0ms Mar 01 22 3 0ms 0ms Mar 02 00 1 0ms 0ms [ User: pubeu - Total duration: 19m22s - Times executed: 235 ]
-
;
Date: Duration: 0ms Database: postgres parameters: $1 = '2060988', $2 = '2060988'
-
Events
Log levels
Key values
- 293,844 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 107 FATAL entries
- 891 ERROR entries
- 1319 WARNING entries
- 10 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 1,045 Max number of times the same event was reported
- 2,327 Total events found
Rank Times reported Error 1 1,045 WARNING: skipping "..." --- only table or database owner can vacuum it
Times Reported Most Frequent Error / Event #1
Day Hour Count Feb 27 20 1,045 2 804 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #2
Day Hour Count Feb 23 00 13 01 8 02 10 03 9 04 11 05 10 06 12 07 6 08 8 09 11 10 10 11 1 12 1 14 4 15 1 17 3 18 9 19 4 20 6 21 24 22 9 23 14 Feb 24 00 7 01 16 02 8 03 13 04 6 05 12 06 9 07 4 08 6 09 8 10 5 11 1 13 1 14 2 15 3 16 2 17 3 18 4 19 2 20 5 21 5 22 6 23 3 Feb 25 00 6 01 1 02 5 03 5 04 8 05 7 06 2 07 2 08 2 09 6 10 2 11 2 12 1 14 1 15 1 17 2 18 3 19 4 20 5 21 3 22 2 23 3 Feb 26 00 4 01 7 02 2 05 6 06 1 07 2 09 2 10 3 11 1 13 1 14 1 15 1 17 2 18 4 19 1 20 7 21 9 22 3 23 5 Feb 27 00 6 01 11 02 8 03 11 04 2 05 10 06 3 07 7 08 3 09 11 10 4 11 2 12 2 13 1 14 3 15 3 16 3 18 4 19 4 20 6 21 7 22 2 23 3 Feb 28 00 15 01 10 02 15 03 2 04 4 05 15 06 8 07 2 08 8 09 2 10 4 11 2 13 2 14 2 15 2 16 1 17 1 18 1 19 5 20 12 21 3 22 4 23 10 Mar 01 00 6 01 12 02 7 03 7 04 5 05 6 06 12 07 8 08 3 09 1 10 2 11 7 12 1 13 1 14 1 15 1 17 2 18 10 19 2 20 1 21 5 22 5 23 3 - ERROR: syntax error in ts"札幌 ホテル フレンチ"
- ERROR: syntax error in ts"回復整体 漣 & 大阪府豊中市岡町北"
- ERROR: syntax error in ts"PS2 & スパロボZ SPECILALZ"
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-02-23 00:15:51
Statement: SELECT /* BasicCountsDAO gen */ ii.cd ,COUNT(ii.id) cnt FROM (SELECT ot.cd ,tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops',$1) UNION SELECT 'reference' ,r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english',$2) OR r.id IN (SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $3 OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE $4 ) ) UNION SELECT ot.cd ,l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper( l.acc_txt ) LIKE $5 OR upper( l.acc_txt ) LIKE $6 ) ) ii GROUP BY ii.cd
Date: 2025-02-23 00:34:43
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-02-23 02:29:19
3 224 WARNING: skipping "..." --- only superuser or database owner can vacuum it
Times Reported Most Frequent Error / Event #3
Day Hour Count Feb 27 20 224 4 51 FATAL: remaining connection slots are reserved for non-replication superuser connections
Times Reported Most Frequent Error / Event #4
Day Hour Count Feb 27 15 21 16 19 17 11 5 43 WARNING: skipping "..." --- only superuser can vacuum it
Times Reported Most Frequent Error / Event #5
Day Hour Count Feb 27 20 43 6 32 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #6
Day Hour Count Feb 23 02 1 04 1 Feb 24 00 1 Feb 25 03 1 16 1 22 1 Feb 26 00 1 03 1 10 1 17 1 20 1 Feb 27 05 1 06 1 08 1 11 1 12 1 13 1 14 1 19 4 Feb 28 02 1 17 1 Mar 01 05 1 06 1 10 4 17 1 19 1 - FATAL: connection to client lost
- FATAL: connection to client lost
- FATAL: connection to client lost
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc
Date: 2025-02-26 03:06:14
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2025-03-01 10:04:28
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-03-01 10:04:28
7 29 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #7
Day Hour Count Feb 23 02 1 04 1 Feb 24 00 1 Feb 25 03 1 16 1 22 1 Feb 26 00 1 03 1 10 1 17 1 20 1 Feb 27 05 1 06 1 08 1 11 1 12 1 13 1 14 1 19 4 Feb 28 02 1 17 1 Mar 01 05 1 06 1 10 1 17 1 19 1 - LOG: could not send data to client: Broken pipe
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-02-26 03:06:14 Database: ctdprd51 Application: User: pubeu Remote:
8 29 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #8
Day Hour Count Feb 25 17 1 19 1 Feb 26 17 1 18 5 19 4 Feb 27 19 2 20 3 21 2 Feb 28 22 4 23 5 Mar 01 00 1 9 10 ERROR: relation "..." already exists
Times Reported Most Frequent Error / Event #9
Day Hour Count Feb 26 10 10 - ERROR: relation "ixn" already exists
- ERROR: relation "term" already exists
- ERROR: relation "ix_ixn_sort_txt" already exists
Statement: CREATE TABLE ixn(#015 id int4 NOT NULL,#015 ixn_prose_txt varchar(1000) NOT NULL,#015 ixn_prose_html varchar(6000) NOT NULL,#015 sort_txt varchar(1000) NOT NULL,#015 actions_txt varchar(500) NOT NULL,#015 ixn_xml text NOT NULL,#015 CONSTRAINT ixn_pk PRIMARY KEY (id)#015 )#015 ;
Date: 2025-02-26 10:37:09
Statement: CREATE TABLE term(#015 id int4 NOT NULL,#015 object_type_id int4 NOT NULL,#015 acc_txt varchar(128) NOT NULL,#015 acc_db_cd varchar(16) NOT NULL,#015 nm varchar(600) NOT NULL,#015 nm_sort varchar(600) NOT NULL,#015 nm_html varchar(3000) NOT NULL,#015 secondary_nm varchar(600),#015 description varchar(4000),#015 note varchar(4000),#015 is_leaf boolean,#015 new_ixn_qty int4 DEFAULT 0 NOT NULL,#015 ixn_qty int4 DEFAULT 0 NOT NULL,#015 has_chems boolean DEFAULT false NOT NULL,#015 has_diseases boolean DEFAULT false NOT NULL,#015 has_genes boolean DEFAULT false NOT NULL,#015 has_go boolean DEFAULT false NOT NULL,#015 has_ixns boolean DEFAULT false NOT NULL,#015 has_marrays boolean DEFAULT false NOT NULL,#015 has_pathways boolean DEFAULT false NOT NULL,#015 has_comps boolean DEFAULT false NOT NULL,#015 has_references boolean DEFAULT false NOT NULL,#015 has_exposures boolean DEFAULT false NOT NULL,#015 has_phenotypes boolean DEFAULT false NOT NULL,#015 curated_edge_qty int4,#015 gene_edge_qty int4,#015 nm_fts tsvector NOT NULL,#015 CONSTRAINT term_pk PRIMARY KEY (id)#015 )#015 ;
Date: 2025-02-26 10:37:09
Statement: CREATE INDEX ix_ixn_sort_txt ON ixn(sort_txt)#015 ;
Date: 2025-02-26 10:37:09 Database: ctdprd51 Application: psql User: pub2 Remote:
10 9 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #10
Day Hour Count Feb 27 11 1 Feb 28 10 6 11 1 14 1 - ERROR: relation "log_query_archive" does not exist at character 76
- ERROR: relation "disease_chem_gene" does not exist at character 369
- ERROR: relation "disease_chem_gene" does not exist at character 369
Statement: SELECT type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive GROUP BY type_cd ORDER BY 2 DESC;
Date: 2025-02-27 11:03:14
Statement: SELECT /* DiseaseIxnsDAO */ dcg.chem_id chemid ,c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,dcg.gene_id geneid ,g.nm genesymbol ,g.acc_txt geneacc ,dcg.ixn_id ixnId ,i.ixn_prose_txt ixnProse ,i.ixn_prose_html ixnProseHtml ,i.actions_txt ixnActions ,dcg.reference_qty refCount ,dcg.taxon_qty taxonCount FROM disease_chem_gene dcg INNER JOIN ixn i ON dcg.ixn_id = i.id INNER JOIN term g ON dcg.gene_id = g.id INNER JOIN term c ON dcg.chem_id = c.id WHERE dcg.disease_id = $1 AND g.object_type_id = 4 AND c.object_type_id = 2 ORDER BY g.nm_sort ,c.nm_sort LIMIT 50
Date: 2025-02-28 10:52:19
Statement: SELECT /* DiseaseIxnsDAO */ dcg.chem_id chemid ,c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,dcg.gene_id geneid ,g.nm genesymbol ,g.acc_txt geneacc ,dcg.ixn_id ixnId ,i.ixn_prose_txt ixnProse ,i.ixn_prose_html ixnProseHtml ,i.actions_txt ixnActions ,dcg.reference_qty refCount ,dcg.taxon_qty taxonCount FROM disease_chem_gene dcg INNER JOIN ixn i ON dcg.ixn_id = i.id INNER JOIN term g ON dcg.gene_id = g.id INNER JOIN term c ON dcg.chem_id = c.id WHERE dcg.disease_id = $1 AND g.object_type_id = 4 AND c.object_type_id = 2 ORDER BY c.nm_sort ,g.nm_sort LIMIT 50
Date: 2025-02-28 10:52:19
11 9 FATAL: canceling authentication due to timeout
Times Reported Most Frequent Error / Event #11
Day Hour Count Feb 26 02 5 Feb 27 17 3 Mar 01 09 1 12 8 FATAL: password authentication failed for user "..."
Times Reported Most Frequent Error / Event #12
Day Hour Count Feb 28 09 8 - FATAL: password authentication failed for user "load"
Detail: Connection matched pg_hba.conf line 85: "host all all 192.168.201.0/24 md5 "
Date: 2025-02-28 09:23:20
13 6 WARNING: there is no transaction in progress
Times Reported Most Frequent Error / Event #13
Day Hour Count Feb 27 20 2 23 4 14 5 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #14
Day Hour Count Feb 23 08 1 Mar 01 10 4 - LOG: could not send data to client: Connection reset by peer
- LOG: could not send data to client: Connection reset by peer
- LOG: could not send data to client: Connection reset by peer
Statement: SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|')
Date: 2025-02-23 08:55:17 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount
Date: 2025-03-01 10:04:28 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-03-01 10:04:28 Database: ctdprd51 Application: User: pubeu Remote:
15 5 FATAL: terminating background worker "..." due to administrator command
Times Reported Most Frequent Error / Event #15
Day Hour Count Mar 01 10 5 - FATAL: terminating background worker "parallel worker" due to administrator command
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-03-01 10:04:28
16 5 ERROR: canceling statement due to user request
Times Reported Most Frequent Error / Event #16
Day Hour Count Feb 27 13 1 19 4 - ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
Statement: SELECT row_to_json(T) FROM ( SELECT archived_count, failed_count FROM pg_stat_archiver ) T;
Date: 2025-02-27 13:58:10
Statement: SELECT count(*) FROM pg_catalog.pg_stat_all_tables WHERE (n_dead_tup/(n_live_tup+n_dead_tup)::float8) > 0.2 AND (n_live_tup+n_dead_tup) > 50;
Date: 2025-02-27 19:34:31 Database: postgres Application: User: zbx_monitor Remote:
17 3 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #17
Day Hour Count Feb 23 08 2 Mar 01 10 1 18 2 ERROR: column "..." does not exist
Times Reported Most Frequent Error / Event #18
Day Hour Count Feb 27 09 2 - ERROR: column "taxon_acc_txt" does not exist at character 39
- ERROR: column "reference_ixn" does not exist at character 39
Statement: SELECT * FROM edit.ixn_actor WHERE taxon_acc_txt = '137245'
Date: 2025-02-27 09:45:08 Database: ctdprd51 Application: pgAdmin 4 - CONN:7007391 User: load Remote:
Statement: SELECT * FROM edit.ixn_actor WHERE reference_ixn = '137245'
Date: 2025-02-27 09:45:22
19 2 ERROR: cannot drop table ... because other objects depend on it
Times Reported Most Frequent Error / Event #19
Day Hour Count Feb 26 10 2 - ERROR: cannot drop table ixn because other objects depend on it
- ERROR: cannot drop table term because other objects depend on it
Detail: constraint disease_chem_gene_ixn_fk on table disease_chem_gene depends on table ixn
Hint: Use DROP ... CASCADE to drop the dependent objects too.
Statement: DROP TABLE IF EXISTS ixn#015 ;Date: 2025-02-26 10:36:56
Detail: constraint disease_chem_gene_chem_fk on table disease_chem_gene depends on table term constraint disease_chem_gene_disease_fk on table disease_chem_gene depends on table term constraint disease_chem_gene_gene_fk on table disease_chem_gene depends on table term
Hint: Use DROP ... CASCADE to drop the dependent objects too.
Statement: DROP TABLE IF EXISTS term#015 ;Date: 2025-02-26 10:37:00
20 1 LOG: process ... still waiting for AccessExclusiveLock on relation ... of database ... after ... ms
Times Reported Most Frequent Error / Event #20
Day Hour Count Feb 26 14 1 - LOG: process 505664 still waiting for AccessExclusiveLock on relation 2633821 of database 484829 after 1000.072 ms
Detail: Process holding the lock: 503347. Wait queue: 505664.
Statement: SELECT * FROM pgbulkload.pg_bulkload($1)Date: 2025-02-26 14:03:24 Database: ctdprd51 Application: pg_bulkload User: load Remote:
21 1 LOG: process ... still waiting for AccessShareLock on relation ... of database ... after ... ms
Times Reported Most Frequent Error / Event #21
Day Hour Count Feb 26 14 1 - LOG: process 503347 still waiting for AccessShareLock on relation 2633821 of database 484829 after 1000.082 ms
Detail: Process holding the lock: 502174. Wait queue: 503347.
Statement: LOCK TABLE edit.db_link IN ACCESS SHARE MODEDate: 2025-02-26 14:00:03 Database: ctdprd51 Application: pg_dump User: postgres Remote:
22 1 ERROR: insert or update on table "..." violates foreign key constraint "..."
Times Reported Most Frequent Error / Event #22
Day Hour Count Feb 26 10 1 - ERROR: insert or update on table "term" violates foreign key constraint "term_obj_type_fk"
Detail: Key (object_type_id)=(1) is not present in table "object_type".
Statement: ALTER TABLE IF EXISTS term ADD CONSTRAINT term_obj_type_fk #015 FOREIGN KEY (object_type_id)#015 REFERENCES object_type(id)#015 ;Date: 2025-02-26 10:37:09
23 1 FATAL: connection to client lost c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (...) FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN (...) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort
Times Reported Most Frequent Error / Event #23
Day Hour Count Feb 23 08 1 - FATAL: connection to client lost c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,c.id chemid ,d.nm diseasenm ,d.acc_txt diseaseacc ,d.acc_db_cd diseaseaccdbcd ,d.id diseaseid ,cd.network_score networkscore ,cd.indirect_gene_qty inferredcount ,cd.reference_qty referencecount ,cd.exposure_reference_qty exposureReferenceCount ,CASE WHEN cd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,cd.network_score DESC NULLS LAST ,d.nm_sort ,c.nm_sort
Statement: SELECT /* ChemDiseaseAssnsDAO */
Date: 2025-02-23 08:55:17
24 1 WARNING: cannot drop function ... because other objects depend on it
Times Reported Most Frequent Error / Event #24
Day Hour Count Feb 26 10 1 25 1 FATAL: connection to client lost d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Times Reported Most Frequent Error / Event #25
Day Hour Count Mar 01 10 1 - FATAL: connection to client lost d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2025-03-01 10:04:28