pgBadger-
Global information
- Generated on Sun Jun 15 04:15:30 2025
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20250614
- Parsed 1,669,053 log entries in 23s
- Log start from 2025-06-08 00:00:00 to 2025-06-14 23:59:50
-
Overview
Global Stats
- 435 Number of unique normalized queries
- 330,149 Number of queries
- 7d6h34m2s Total query duration
- 2025-06-08 00:00:00 First query
- 2025-06-14 23:59:41 Last query
- 10 queries/s at 2025-06-10 06:15:24 Query peak
- 7d6h34m2s Total query duration
- 32s16ms Prepare/parse total duration
- 43s974ms Bind total duration
- 7d6h32m46s Execute total duration
- 2,292 Number of events
- 134 Number of unique normalized events
- 1,394 Max number of times the same event was reported
- 0 Number of cancellation
- 200 Total number of automatic vacuums
- 127 Total number of automatic analyzes
- 45 Number temporary file
- 3.41 MiB Max size of temporary file
- 1.37 MiB Average size of temporary file
- 59,278 Total number of sessions
- 106 sessions at 2025-06-08 23:30:50 Session peak
- 270d11h37m27s Total duration of sessions
- 6m34s Average duration of sessions
- 5 Average queries per session
- 10s601ms Average queries duration per session
- 6m23s Average idle time per session
- 59,437 Total number of connections
- 91 connections/s at 2025-06-09 05:36:45 Connection peak
- 4 Total number of databases
SQL Traffic
Key values
- 10 queries/s Query Peak
- 2025-06-10 06:15:24 Date
SELECT Traffic
Key values
- 10 queries/s Query Peak
- 2025-06-10 06:15:24 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2025-06-11 13:07:56 Date
Queries duration
Key values
- 7d6h34m2s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 08 00 5,478 1s8ms 8m53s 1s627ms 3m16s 3m41s 11m56s 01 5,666 1s10ms 5m21s 1s636ms 3m9s 5m31s 7m21s 02 6,276 1s9ms 4m30s 1s576ms 3m25s 3m42s 6m43s 03 6,180 1s1ms 18m36s 1s782ms 3m23s 3m44s 21m18s 04 6,185 1s9ms 18m36s 1s716ms 3m26s 4m11s 20m53s 05 5,960 1s1ms 18m33s 1s701ms 3m17s 3m34s 21m16s 06 5,761 0ms 1m17s 1s613ms 3m48s 3m53s 5m10s 07 7 0ms 4s195ms 2s59ms 0ms 0ms 14s419ms 08 808 0ms 7s638ms 1s592ms 2m10s 3m18s 3m47s 09 5,937 1s22ms 4m17s 1s588ms 3m16s 3m45s 6m55s 10 3,210 1s17ms 1m17s 1s552ms 3m3s 3m24s 4m20s 11 147 0ms 3m35s 3s535ms 9s860ms 15s984ms 3m37s 12 84 0ms 6s911ms 2s76ms 7s151ms 10s860ms 14s487ms 13 63 0ms 18m8s 19s658ms 6s241ms 16s700ms 18m8s 14 134 0ms 1m16s 4s57ms 23s475ms 45s484ms 1m48s 15 120 0ms 5m20s 6s646ms 8s298ms 15s59ms 5m34s 16 81 0ms 17s637ms 2s452ms 8s197ms 11s467ms 22s512ms 17 72 0ms 28s737ms 3s712ms 12s694ms 28s610ms 57s266ms 18 124 0ms 1m17s 4s36ms 23s77ms 52s75ms 1m49s 19 150 0ms 4m32s 6s540ms 19s658ms 1m5s 4m58s 20 95 0ms 23s326ms 2s590ms 9s875ms 13s11ms 23s326ms 21 199 0ms 5m18s 4s89ms 17s609ms 29s308ms 5m38s 22 583 0ms 4m31s 4s60ms 1m18s 1m34s 5m5s 23 254 0ms 3m11s 3s229ms 26s440ms 40s968ms 3m49s Jun 09 00 47 0ms 9m19s 20s796ms 17s633ms 2m7s 10m7s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 92 0ms 1m45s 4s16ms 17s18ms 33s438ms 1m52s 06 106 0ms 12m1s 32s484ms 45s982ms 12m1s 13m58s 07 109 0ms 18s14ms 2s607ms 11s736ms 15s748ms 53s683ms 08 110 0ms 2m11s 5s723ms 52s717ms 53s194ms 2m18s 09 181 0ms 17s635ms 2s216ms 15s675ms 37s274ms 58s634ms 10 177 0ms 1m16s 3s447ms 42s565ms 45s851ms 1m52s 11 272 0ms 19s733ms 1s756ms 14s654ms 22s686ms 36s100ms 12 601 1s1ms 24s649ms 1s775ms 24s991ms 52s389ms 1m22s 13 598 1s2ms 29s318ms 1s597ms 23s774ms 26s790ms 45s178ms 14 615 1s18ms 1m17s 1s972ms 33s336ms 1m 2m1s 15 810 1s8ms 5m5s 2s729ms 38s274ms 4m42s 5m22s 16 689 1s13ms 4m7s 2s53ms 37s724ms 46s444ms 4m21s 17 850 1s1ms 19s658ms 1s849ms 41s428ms 57s384ms 1m9s 18 907 1s 18m20s 3s674ms 1m16s 5m17s 18m39s 19 986 1s22ms 4m14s 1s889ms 38s198ms 1m1s 4m43s 20 354 0ms 48s938ms 1s990ms 35s603ms 43s505ms 2m16s 21 301 0ms 8m3s 4s53ms 53s406ms 1m19s 11m35s 22 806 0ms 18s426ms 1s671ms 47s336ms 1m3s 1m29s 23 772 1s10ms 9m53s 2s687ms 34s164ms 46s425ms 10m21s Jun 10 00 548 1s3ms 18m14s 4s628ms 29s867ms 1m9s 19m18s 01 625 1s1ms 3m 2s321ms 44s935ms 1m10s 3m7s 02 690 1s13ms 3m17s 2s512ms 44s843ms 1m58s 3m42s 03 736 1s15ms 37s288ms 1s683ms 28s706ms 47s368ms 1m7s 04 782 1s11ms 3m40s 2s68ms 47s489ms 1m10s 4m3s 05 960 1s11ms 3m8s 1s881ms 41s637ms 47s874ms 3m26s 06 1,058 1s3ms 1m17s 1s953ms 1m2s 1m24s 5m35s 07 1,020 1s12ms 19s26ms 1s461ms 34s956ms 41s173ms 1m2s 08 1,222 1s25ms 18s646ms 1s484ms 43s514ms 48s269ms 1m8s 09 1,577 1s5ms 23s246ms 1s541ms 57s627ms 1m 1m15s 10 1,708 1s13ms 4m7s 1s801ms 1m4s 1m32s 4m28s 11 2,083 1s12ms 20s622ms 1s643ms 1m19s 1m42s 1m55s 12 2,024 1s9ms 18m41s 2s121ms 1m30s 1m49s 19m3s 13 2,394 1s6ms 1m19s 1s700ms 1m31s 1m50s 3m34s 14 2,800 1s12ms 1m17s 1s597ms 1m41s 1m47s 2m47s 15 3,432 1s1ms 18m28s 1s925ms 2m4s 2m25s 20m31s 16 2,649 1s3ms 33s115ms 1s646ms 2m14s 2m29s 4m44s 17 2,736 1s12ms 17s290ms 1s516ms 1m39s 1m41s 1m56s 18 3,349 1s34ms 1m17s 1s584ms 2m9s 2m31s 2m54s 19 4,419 1s13ms 18m28s 1s810ms 2m39s 2m52s 20m41s 20 4,009 1s38ms 23s683ms 1s568ms 2m45s 3m6s 3m25s 21 3,616 1s15ms 18s811ms 1s540ms 2m23s 2m45s 3m18s 22 4,657 1s17ms 18s247ms 1s540ms 2m45s 2m53s 4m9s 23 4,583 1s23ms 26s64ms 1s554ms 2m45s 2m49s 3m28s Jun 11 00 4,575 1s26ms 18m30s 1s899ms 3m3s 4m1s 21m5s 01 4,578 1s22ms 1m10s 1s567ms 3m1s 3m8s 3m17s 02 4,839 1s13ms 18m29s 1s730ms 2m56s 2m59s 20m3s 03 2,407 1s6ms 48s977ms 1s596ms 1m26s 1m54s 2m15s 04 2,841 1s1ms 18m20s 1s983ms 1m49s 2m1s 19m54s 05 2,869 1s22ms 24s931ms 1s574ms 1m51s 1m58s 2m27s 06 3,303 1s51ms 18m16s 1s943ms 2m9s 3m14s 18m41s 07 3,754 1s3ms 18m25s 1s875ms 2m31s 2m52s 19m45s 08 3,903 1s2ms 25s404ms 1s534ms 2m20s 2m35s 3m43s 09 4,848 1s 18m26s 1s755ms 2m37s 3m9s 20m54s 10 4,494 1s5ms 18m51s 2s98ms 3m6s 4m26s 21m1s 11 3,708 1s1ms 18m36s 1s841ms 2m10s 2m47s 20m29s 12 5,745 1s 21m13s 3s721ms 21m21s 23m16s 42m2s 13 5,154 1s31ms 18m47s 1s952ms 2m58s 3m37s 20m46s 14 4,712 1s7ms 21m16s 1s979ms 3m30s 6m33s 23m14s 15 4,049 1s23ms 18m15s 1s781ms 2m41s 2m59s 19m58s 16 4,666 1s8ms 19m12s 2s12ms 2m52s 4m36s 21m15s 17 4,977 1s 1m27s 1s610ms 3m 3m18s 6m5s 18 5,056 1s21ms 18m43s 2s45ms 3m34s 5m31s 21m5s 19 5,151 1s18ms 18m34s 1s718ms 2m51s 3m20s 20m46s 20 5,886 1s13ms 26s435ms 1s526ms 3m36s 3m46s 4m19s 21 6,269 1s7ms 22s610ms 1s569ms 3m26s 3m55s 4m6s 22 6,249 1s16ms 27s616ms 1s573ms 3m45s 3m54s 4m11s 23 5,219 1s8ms 18m28s 1s798ms 3m30s 3m48s 20m24s Jun 12 00 3,784 1s17ms 18m34s 2s12ms 3m8s 3m23s 19m34s 01 3,024 1s21ms 25s95ms 1s603ms 1m57s 2m24s 2m37s 02 3,667 1s11ms 18m27s 2s287ms 2m38s 5m59s 20m10s 03 4,368 1s8ms 19s865ms 1s693ms 3m13s 3m43s 4m22s 04 3,827 1s 19m49s 1s923ms 2m51s 3m21s 22m27s 05 5,416 1s1ms 27s387ms 1s597ms 3m21s 3m35s 3m56s 06 2,605 1s2ms 18m20s 2s42ms 1m50s 2m26s 19m29s 07 2,518 1s11ms 19s608ms 1s654ms 2m5s 2m22s 2m53s 08 4,111 1s12ms 17s853ms 1s550ms 2m19s 2m41s 2m58s 09 3,506 1s14ms 5m19s 1s748ms 2m22s 3m3s 6m26s 10 3,615 1s3ms 1m18s 1s574ms 2m12s 2m33s 3m36s 11 3,450 1s11ms 56s650ms 1s557ms 2m13s 2m22s 2m56s 12 3,777 1s4ms 25s363ms 1s605ms 2m22s 2m32s 2m52s 13 3,892 1s6ms 17s661ms 1s528ms 2m28s 2m45s 3m49s 14 6,155 1s7ms 1m18s 1s609ms 3m54s 4m6s 4m12s 15 4,385 1s6ms 19m30s 1s779ms 2m32s 3m12s 20m59s 16 3,710 1s16ms 18s392ms 1s553ms 2m18s 2m24s 3m17s 17 3,568 1s46ms 18m25s 2s191ms 2m11s 2m29s 20m19s 18 3,396 1s18ms 1m18s 1s583ms 1m58s 2m4s 3m57s 19 4,317 1s39ms 18m31s 1s822ms 2m50s 3m32s 19m40s 20 5,003 1s14ms 26s342ms 1s562ms 2m47s 2m59s 3m9s 21 4,104 1s1ms 18m39s 2s186ms 2m24s 2m41s 26m4s 22 3,664 1s5ms 18m27s 1s884ms 2m31s 2m46s 20m12s 23 2,533 1s7ms 25s660ms 1s568ms 1m41s 1m53s 2m2s Jun 13 00 2,701 1s5ms 7m43s 1s747ms 1m51s 2m13s 9m17s 01 3,891 1s5ms 26s436ms 1s565ms 2m27s 2m54s 3m17s 02 2,726 1s 8h11m32s 12s359ms 2m4s 2m27s 8h12m37s 03 1,499 1s73ms 2m9s 1s589ms 2m11s 2m22s 3m6s Jun 14 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 1 0ms 3s477ms 3s477ms 0ms 3s477ms 3s477ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 18 15 0ms 6s627ms 3s365ms 0ms 13s455ms 19s251ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 196 0ms 39s721ms 2s275ms 14s101ms 42s109ms 49s657ms 21 224 0ms 2m3s 2s513ms 17s140ms 26s470ms 2m5s 22 254 1s 26s986ms 1s950ms 19s152ms 26s821ms 59s886ms 23 361 1s5ms 22s524ms 1s916ms 22s952ms 31s734ms 1m Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 08 00 5,477 0 1s626ms 2m55s 3m16s 3m52s 01 5,661 0 1s635ms 2m49s 3m9s 6m6s 02 6,273 0 1s576ms 3m5s 3m25s 4m1s 03 6,176 0 1s781ms 3m9s 3m23s 6m14s 04 6,181 0 1s715ms 3m8s 3m26s 4m30s 05 5,953 0 1s700ms 3m10s 3m17s 3m42s 06 5,747 11 1s612ms 3m25s 3m44s 3m53s 07 7 0 2s59ms 0ms 0ms 0ms 08 806 0 1s590ms 0ms 2m10s 3m21s 09 5,936 0 1s587ms 3m3s 3m16s 5m46s 10 3,194 11 1s551ms 2m43s 3m2s 3m24s 11 144 0 3s554ms 7s917ms 9s860ms 41s342ms 12 83 0 2s77ms 4s413ms 7s151ms 13s699ms 13 59 0 20s848ms 4s166ms 6s241ms 17s223ms 14 123 11 4s57ms 12s537ms 23s475ms 45s484ms 15 119 0 6s686ms 5s866ms 8s298ms 4m18s 16 80 0 2s458ms 4s992ms 7s312ms 15s252ms 17 63 0 3s707ms 4s852ms 8s171ms 35s413ms 18 111 10 4s83ms 8s985ms 21s538ms 58s429ms 19 149 0 6s563ms 9s656ms 19s658ms 4m42s 20 95 0 2s590ms 7s680ms 9s875ms 16s682ms 21 198 0 4s99ms 12s993ms 17s609ms 29s366ms 22 582 0 4s61ms 56s903ms 1m18s 2m40s 23 252 0 3s242ms 16s307ms 26s440ms 1m5s Jun 09 00 46 0 21s93ms 3s175ms 17s633ms 10m 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 87 0 4s118ms 16s210ms 17s18ms 1m52s 06 94 11 32s773ms 24s531ms 1m48s 12m3s 07 108 0 2s606ms 6s222ms 11s736ms 22s697ms 08 110 0 5s723ms 7s628ms 52s717ms 55s95ms 09 180 0 2s214ms 7s615ms 15s675ms 37s440ms 10 166 8 3s460ms 14s526ms 34s552ms 45s997ms 11 272 0 1s756ms 10s838ms 14s654ms 26s375ms 12 600 0 1s775ms 20s255ms 24s991ms 1m17s 13 597 0 1s597ms 20s86ms 23s774ms 29s870ms 14 603 11 1s972ms 21s559ms 30s873ms 1m22s 15 809 0 2s730ms 28s362ms 38s274ms 5m19s 16 686 0 2s52ms 24s680ms 35s446ms 54s81ms 17 850 0 1s849ms 34s726ms 41s428ms 1m5s 18 895 11 3s676ms 32s415ms 1m16s 5m52s 19 982 0 1s886ms 31s785ms 38s198ms 1m23s 20 354 0 1s990ms 28s24ms 35s603ms 2m16s 21 299 0 4s65ms 29s832ms 53s406ms 11m35s 22 804 0 1s670ms 34s38ms 47s336ms 1m12s 23 771 0 2s686ms 29s723ms 34s164ms 4m11s Jun 10 00 545 0 4s632ms 20s614ms 29s867ms 6m54s 01 624 0 2s319ms 25s516ms 44s935ms 2m1s 02 689 0 2s512ms 28s350ms 44s843ms 3m36s 03 736 0 1s683ms 25s476ms 28s706ms 56s691ms 04 780 0 2s66ms 25s300ms 47s489ms 1m26s 05 956 0 1s880ms 36s622ms 41s637ms 1m8s 06 1,046 11 1s953ms 37s512ms 57s539ms 1m49s 07 1,020 0 1s461ms 29s198ms 34s956ms 41s694ms 08 1,222 0 1s484ms 38s202ms 43s514ms 48s385ms 09 1,577 0 1s541ms 52s328ms 57s627ms 1m 10 1,697 11 1s801ms 57s254ms 1m4s 1m49s 11 2,083 0 1s643ms 1m8s 1m19s 1m42s 12 2,024 0 2s121ms 1m3s 1m30s 1m51s 13 2,394 0 1s700ms 1m15s 1m31s 2m47s 14 2,789 11 1s597ms 1m28s 1m38s 1m49s 15 3,432 0 1s925ms 1m54s 2m4s 2m59s 16 2,649 0 1s646ms 1m54s 2m14s 2m40s 17 2,736 0 1s516ms 1m32s 1m39s 1m43s 18 3,337 11 1s583ms 1m54s 2m5s 2m31s 19 4,417 0 1s809ms 2m25s 2m39s 3m23s 20 4,008 0 1s567ms 2m4s 2m45s 3m14s 21 3,615 0 1s540ms 2m8s 2m23s 3m14s 22 4,656 0 1s540ms 2m29s 2m45s 2m58s 23 4,582 0 1s554ms 2m30s 2m45s 3m2s Jun 11 00 4,574 0 1s898ms 2m38s 3m3s 8m27s 01 4,578 0 1s567ms 2m27s 3m1s 3m9s 02 4,839 0 1s730ms 2m41s 2m56s 3m22s 03 2,407 0 1s596ms 1m18s 1m26s 1m58s 04 2,840 0 1s983ms 1m31s 1m49s 3m8s 05 2,864 0 1s572ms 1m33s 1m51s 2m1s 06 3,291 11 1s943ms 1m50s 2m8s 3m17s 07 3,752 0 1s875ms 2m11s 2m31s 3m9s 08 3,894 0 1s534ms 2m5s 2m20s 2m59s 09 4,847 0 1s754ms 2m23s 2m37s 3m23s 10 4,483 11 2s98ms 2m39s 2m57s 20m13s 11 3,706 0 1s840ms 2m5s 2m9s 3m29s 12 5,738 0 3s721ms 6m31s 21m17s 24m12s 13 5,152 0 1s951ms 2m47s 2m58s 20m19s 14 4,699 11 1s978ms 2m37s 3m25s 7m32s 15 4,047 0 1s781ms 2m16s 2m41s 2m59s 16 4,663 0 2s11ms 2m28s 2m52s 19m35s 17 4,975 0 1s609ms 2m42s 3m 4m30s 18 5,044 12 2s45ms 2m43s 3m11s 20m43s 19 5,150 0 1s718ms 2m40s 2m51s 3m25s 20 5,884 0 1s526ms 3m5s 3m36s 4m9s 21 6,269 0 1s569ms 3m14s 3m26s 3m59s 22 6,249 0 1s573ms 3m17s 3m45s 3m58s 23 5,217 0 1s798ms 2m54s 3m30s 3m52s Jun 12 00 3,782 0 2s10ms 2m33s 3m8s 10m29s 01 3,024 0 1s603ms 1m50s 1m57s 2m32s 02 3,666 0 2s286ms 2m19s 2m38s 19m1s 03 4,367 0 1s692ms 2m36s 3m13s 4m18s 04 3,825 0 1s922ms 2m28s 2m51s 3m28s 05 5,411 0 1s596ms 2m58s 3m21s 3m44s 06 2,594 11 2s42ms 1m38s 1m50s 2m26s 07 2,518 0 1s654ms 1m44s 2m5s 2m30s 08 4,110 0 1s550ms 2m14s 2m19s 2m44s 09 3,506 0 1s748ms 2m3s 2m22s 5m59s 10 3,603 11 1s573ms 2m7s 2m10s 2m23s 11 3,450 0 1s557ms 2m3s 2m13s 2m30s 12 3,777 0 1s605ms 2m13s 2m22s 2m43s 13 3,892 0 1s528ms 2m1s 2m28s 3m22s 14 6,142 11 1s609ms 3m23s 3m39s 4m6s 15 4,385 0 1s779ms 2m15s 2m32s 3m30s 16 3,710 0 1s553ms 1m59s 2m18s 2m40s 17 3,568 0 2s191ms 1m57s 2m11s 19m17s 18 3,384 11 1s583ms 1m42s 1m50s 2m4s 19 4,317 0 1s822ms 2m19s 2m50s 3m36s 20 5,002 0 1s561ms 2m36s 2m47s 3m6s 21 4,103 0 2s186ms 2m14s 2m24s 20m20s 22 3,662 0 1s883ms 2m2s 2m31s 3m10s 23 2,533 0 1s568ms 1m26s 1m41s 2m2s Jun 13 00 2,699 0 1s744ms 1m35s 1m51s 2m15s 01 3,889 0 1s564ms 2m15s 2m27s 3m11s 02 2,726 0 12s359ms 1m42s 2m4s 2m43s 03 1,499 0 1s589ms 1m38s 2m11s 3m6s Jun 14 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 0 0 0ms 0ms 0ms 0ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 18 15 0 3s365ms 0ms 0ms 17s769ms 19 0 0 0ms 0ms 0ms 0ms 20 193 0 2s269ms 10s587ms 14s101ms 49s355ms 21 224 0 2s513ms 10s487ms 17s140ms 36s202ms 22 253 0 1s950ms 9s548ms 19s152ms 29s79ms 23 358 0 1s902ms 17s242ms 22s952ms 34s370ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 08 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 09 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 10 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 11 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 12 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jun 13 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms Jun 14 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jun 08 00 0 5,701 5,701.00 0.00% 01 0 5,899 5,899.00 0.00% 02 0 6,546 6,546.00 0.00% 03 0 6,398 6,398.00 0.00% 04 0 6,419 6,419.00 0.00% 05 0 6,142 6,142.00 0.00% 06 0 5,970 5,970.00 0.00% 07 0 7 7.00 0.00% 08 0 825 825.00 0.00% 09 0 6,160 6,160.00 0.00% 10 0 3,305 3,305.00 0.00% 11 0 147 147.00 0.00% 12 0 84 84.00 0.00% 13 0 63 63.00 0.00% 14 0 123 123.00 0.00% 15 0 120 120.00 0.00% 16 0 81 81.00 0.00% 17 0 77 77.00 0.00% 18 0 118 118.00 0.00% 19 0 150 150.00 0.00% 20 0 95 95.00 0.00% 21 1 199 199.00 0.50% 22 0 583 583.00 0.00% 23 0 254 254.00 0.00% Jun 09 00 0 46 46.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 87 87.00 0.00% 06 0 113 113.00 0.00% 07 0 140 140.00 0.00% 08 0 126 126.00 0.00% 09 0 192 192.00 0.00% 10 0 179 179.00 0.00% 11 0 288 288.00 0.00% 12 0 603 603.00 0.00% 13 0 597 597.00 0.00% 14 0 616 616.00 0.00% 15 0 817 817.00 0.00% 16 0 719 719.00 0.00% 17 0 858 858.00 0.00% 18 0 902 902.00 0.00% 19 0 994 994.00 0.00% 20 0 357 357.00 0.00% 21 0 302 302.00 0.00% 22 0 816 816.00 0.00% 23 0 775 775.00 0.00% Jun 10 00 0 551 551.00 0.00% 01 0 625 625.00 0.00% 02 0 692 692.00 0.00% 03 0 737 737.00 0.00% 04 0 784 784.00 0.00% 05 0 966 966.00 0.00% 06 0 1,094 1,094.00 0.00% 07 0 1,088 1,088.00 0.00% 08 0 1,251 1,251.00 0.00% 09 0 1,606 1,606.00 0.00% 10 0 1,726 1,726.00 0.00% 11 0 2,129 2,129.00 0.00% 12 0 2,081 2,081.00 0.00% 13 0 2,455 2,455.00 0.00% 14 0 2,879 2,879.00 0.00% 15 0 3,560 3,560.00 0.00% 16 0 2,715 2,715.00 0.00% 17 0 2,812 2,812.00 0.00% 18 0 3,456 3,456.00 0.00% 19 0 4,605 4,605.00 0.00% 20 0 4,146 4,146.00 0.00% 21 0 3,739 3,739.00 0.00% 22 0 4,811 4,811.00 0.00% 23 0 4,774 4,774.00 0.00% Jun 11 00 0 4,760 4,760.00 0.00% 01 0 4,744 4,744.00 0.00% 02 1 5,037 5,037.00 0.02% 03 0 2,465 2,465.00 0.00% 04 0 2,913 2,913.00 0.00% 05 0 2,940 2,940.00 0.00% 06 0 3,380 3,380.00 0.00% 07 0 3,909 3,909.00 0.00% 08 0 4,134 4,134.00 0.00% 09 0 5,007 5,007.00 0.00% 10 1 4,625 4,625.00 0.02% 11 0 3,814 3,814.00 0.00% 12 0 5,872 5,872.00 0.00% 13 0 5,344 5,344.00 0.00% 14 0 4,899 4,899.00 0.00% 15 0 4,176 4,176.00 0.00% 16 0 4,852 4,852.00 0.00% 17 0 5,179 5,179.00 0.00% 18 0 5,232 5,232.00 0.00% 19 0 5,350 5,350.00 0.00% 20 0 6,096 6,096.00 0.00% 21 0 6,523 6,523.00 0.00% 22 0 6,487 6,487.00 0.00% 23 0 5,379 5,379.00 0.00% Jun 12 00 0 3,909 3,909.00 0.00% 01 0 3,095 3,095.00 0.00% 02 0 3,770 3,770.00 0.00% 03 0 4,495 4,495.00 0.00% 04 0 3,937 3,937.00 0.00% 05 0 5,612 5,612.00 0.00% 06 0 2,655 2,655.00 0.00% 07 0 2,570 2,570.00 0.00% 08 0 4,253 4,253.00 0.00% 09 0 3,591 3,591.00 0.00% 10 0 3,697 3,697.00 0.00% 11 0 3,552 3,552.00 0.00% 12 0 3,896 3,896.00 0.00% 13 0 4,018 4,018.00 0.00% 14 0 6,340 6,340.00 0.00% 15 0 4,527 4,527.00 0.00% 16 0 3,816 3,816.00 0.00% 17 0 3,666 3,666.00 0.00% 18 0 3,475 3,475.00 0.00% 19 0 4,420 4,420.00 0.00% 20 0 5,164 5,164.00 0.00% 21 0 4,197 4,197.00 0.00% 22 0 3,750 3,750.00 0.00% 23 0 2,571 2,571.00 0.00% Jun 13 00 0 2,755 2,755.00 0.00% 01 0 3,986 3,986.00 0.00% 02 0 2,790 2,790.00 0.00% 03 0 1,543 1,543.00 0.00% Jun 14 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 1 1.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 18 0 15 15.00 0.00% 19 0 0 0.00 0.00% 20 0 196 196.00 0.00% 21 0 224 224.00 0.00% 22 0 255 255.00 0.00% 23 0 361 361.00 0.00% Day Hour Count Average / Second Jun 08 00 711 0.20/s 01 723 0.20/s 02 770 0.21/s 03 1,015 0.28/s 04 907 0.25/s 05 858 0.24/s 06 3,161 0.88/s 07 207 0.06/s 08 262 0.07/s 09 920 0.26/s 10 443 0.12/s 11 239 0.07/s 12 90 0.03/s 13 91 0.03/s 14 90 0.03/s 15 97 0.03/s 16 82 0.02/s 17 107 0.03/s 18 106 0.03/s 19 102 0.03/s 20 131 0.04/s 21 1,154 0.32/s 22 1,941 0.54/s 23 2,345 0.65/s Jun 09 00 230 0.06/s 01 64 0.02/s 02 62 0.02/s 03 64 0.02/s 04 62 0.02/s 05 220 0.06/s 06 91 0.03/s 07 92 0.03/s 08 267 0.07/s 09 1,246 0.35/s 10 1,513 0.42/s 11 110 0.03/s 12 134 0.04/s 13 123 0.03/s 14 144 0.04/s 15 151 0.04/s 16 122 0.03/s 17 140 0.04/s 18 156 0.04/s 19 158 0.04/s 20 938 0.26/s 21 433 0.12/s 22 427 0.12/s 23 127 0.04/s Jun 10 00 133 0.04/s 01 141 0.04/s 02 380 0.11/s 03 137 0.04/s 04 211 0.06/s 05 223 0.06/s 06 278 0.08/s 07 135 0.04/s 08 169 0.05/s 09 446 0.12/s 10 202 0.06/s 11 216 0.06/s 12 205 0.06/s 13 273 0.08/s 14 277 0.08/s 15 331 0.09/s 16 318 0.09/s 17 245 0.07/s 18 347 0.10/s 19 534 0.15/s 20 466 0.13/s 21 422 0.12/s 22 534 0.15/s 23 482 0.13/s Jun 11 00 575 0.16/s 01 507 0.14/s 02 606 0.17/s 03 248 0.07/s 04 448 0.12/s 05 286 0.08/s 06 319 0.09/s 07 407 0.11/s 08 499 0.14/s 09 520 0.14/s 10 635 0.18/s 11 378 0.10/s 12 1,591 0.44/s 13 605 0.17/s 14 480 0.13/s 15 453 0.13/s 16 509 0.14/s 17 572 0.16/s 18 651 0.18/s 19 577 0.16/s 20 780 0.22/s 21 843 0.23/s 22 859 0.24/s 23 711 0.20/s Jun 12 00 534 0.15/s 01 428 0.12/s 02 502 0.14/s 03 659 0.18/s 04 546 0.15/s 05 971 0.27/s 06 236 0.07/s 07 380 0.11/s 08 401 0.11/s 09 365 0.10/s 10 365 0.10/s 11 352 0.10/s 12 390 0.11/s 13 384 0.11/s 14 1,039 0.29/s 15 441 0.12/s 16 364 0.10/s 17 353 0.10/s 18 284 0.08/s 19 483 0.13/s 20 554 0.15/s 21 416 0.12/s 22 461 0.13/s 23 250 0.07/s Jun 13 00 283 0.08/s 01 424 0.12/s 02 293 0.08/s 03 146 0.04/s Jun 14 03 80 0.02/s 04 73 0.02/s 05 67 0.02/s 06 74 0.02/s 07 79 0.02/s 08 76 0.02/s 09 80 0.02/s 10 80 0.02/s 11 80 0.02/s 12 80 0.02/s 13 78 0.02/s 14 76 0.02/s 15 78 0.02/s 16 40 0.01/s 18 557 0.15/s 19 94 0.03/s 20 98 0.03/s 21 59 0.02/s 22 130 0.04/s 23 364 0.10/s Day Hour Count Average Duration Average idle time Jun 08 00 711 3m30s 3m17s 01 723 3m10s 2m57s 02 770 3m8s 2m55s 03 1,011 2m27s 2m16s 04 911 2m41s 2m29s 05 857 2m53s 2m41s 06 3,151 47s397ms 44s446ms 07 219 10m55s 10m54s 08 260 10m25s 10m20s 09 921 2m43s 2m33s 10 443 5m19s 5m7s 11 239 9m46s 9m44s 12 90 27m33s 27m31s 13 91 26m35s 26m22s 14 90 26m53s 26m47s 15 97 24m9s 24m1s 16 82 30m19s 30m17s 17 107 22m15s 22m13s 18 106 23m1s 22m56s 19 102 23m32s 23m22s 20 125 19m22s 19m21s 21 1,153 5m3s 5m2s 22 1,906 2m14s 2m13s 23 2,386 1m37s 1m37s Jun 09 00 229 9m28s 9m24s 01 64 30m40s 30m40s 02 62 30m40s 30m40s 03 64 30m38s 30m38s 04 62 30m40s 30m40s 05 221 23m39s 23m37s 06 92 26m26s 25m49s 07 92 26m25s 26m22s 08 258 9m41s 9m39s 09 1,255 2m11s 2m11s 10 1,513 2m11s 2m11s 11 110 21m23s 21m19s 12 134 17m37s 17m29s 13 119 21m13s 21m5s 14 144 16m35s 16m27s 15 151 16m56s 16m41s 16 122 18m58s 18m46s 17 140 18m7s 17m55s 18 154 15m32s 15m11s 19 160 15m26s 15m15s 20 938 2m35s 2m35s 21 432 6m25s 6m23s 22 428 5m29s 5m26s 23 127 18m48s 18m32s Jun 10 00 133 17m58s 17m39s 01 140 18m 17m50s 02 381 6m29s 6m24s 03 137 17m9s 17m 04 210 11m15s 11m8s 05 224 10m38s 10m30s 06 278 8m39s 8m31s 07 135 17m26s 17m15s 08 169 14m24s 14m13s 09 446 5m28s 5m22s 10 201 12m28s 12m12s 11 216 10m42s 10m26s 12 205 12m13s 11m52s 13 271 9m 8m45s 14 276 8m45s 8m28s 15 332 7m27s 7m7s 16 318 7m37s 7m23s 17 245 9m54s 9m37s 18 347 7m4s 6m48s 19 534 4m37s 4m22s 20 465 5m1s 4m47s 21 422 5m23s 5m10s 22 535 4m29s 4m15s 23 483 7m41s 7m26s Jun 11 00 569 4m21s 4m5s 01 514 4m45s 4m31s 02 603 14m12s 13m58s 03 248 9m14s 8m58s 04 425 5m38s 5m24s 05 286 8m35s 8m19s 06 318 7m43s 7m22s 07 407 6m6s 5m49s 08 500 4m48s 4m36s 09 519 4m46s 4m30s 10 635 5m22s 5m8s 11 377 6m36s 6m18s 12 1,592 1m42s 1m28s 13 602 4m9s 3m52s 14 484 5m11s 4m52s 15 451 5m29s 5m13s 16 511 4m44s 4m26s 17 571 5m37s 5m23s 18 650 3m47s 3m31s 19 579 4m10s 3m55s 20 780 3m27s 3m15s 21 843 2m46s 2m35s 22 859 2m52s 2m40s 23 709 3m31s 3m18s Jun 12 00 536 4m34s 4m20s 01 427 5m24s 5m12s 02 499 4m59s 4m42s 03 662 3m33s 3m22s 04 544 4m32s 4m18s 05 974 2m33s 2m24s 06 236 10m10s 9m47s 07 380 6m29s 6m18s 08 401 6m9s 5m53s 09 364 6m46s 6m29s 10 365 6m37s 6m22s 11 353 6m58s 6m43s 12 389 6m20s 6m4s 13 385 6m11s 5m56s 14 1,039 2m26s 2m16s 15 441 5m38s 5m20s 16 364 6m37s 6m21s 17 353 6m52s 6m30s 18 283 8m21s 8m2s 19 482 4m50s 4m34s 20 554 4m8s 3m54s 21 415 5m44s 5m23s 22 463 5m19s 5m4s 23 249 9m49s 9m33s Jun 13 00 284 8m28s 8m11s 01 424 5m40s 5m25s 02 292 9m41s 7m46s 03 147 20m48s 20m32s Jun 14 03 80 30m49s 30m49s 04 73 30m50s 30m50s 05 67 29m54s 29m54s 06 74 30m48s 30m48s 07 79 30m48s 30m48s 08 76 30m49s 30m49s 09 80 30m49s 30m49s 10 80 30m48s 30m48s 11 80 30m48s 30m48s 12 80 30m49s 30m49s 13 78 30m49s 30m49s 14 76 30m48s 30m48s 15 78 30m50s 30m50s 16 82 6h44m56s 6h44m56s 18 482 3s296ms 3s191ms 19 16 30m31s 30m31s 20 83 12m37s 12m31s 21 59 15m22s 15m12s 22 130 8m44s 8m40s 23 363 2m40s 2m38s -
Connections
Established Connections
Key values
- 91 connections Connection Peak
- 2025-06-09 05:36:45 Date
Connections per database
Key values
- ctdprd51 Main Database
- 59,437 connections Total
Connections per user
Key values
- pubeu Main User
- 59,437 connections Total
Connections per host
Key values
- 10.12.5.37 Main host with 49275 connections
- 59,437 Total connections
-
Sessions
Simultaneous sessions
Key values
- 106 sessions Session Peak
- 2025-06-08 23:30:50 Date
Histogram of session times
Key values
- 17,450 1000-30000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 59,278 sessions Total
Sessions per user
Key values
- pubeu Main User
- 59,278 sessions Total
Sessions per host
Key values
- 10.12.5.37 Main Host
- 59,278 sessions Total
Host Count Total Duration Average Duration 10.12.5.37 49,248 48d7h43m6s 1m24s 10.12.5.38 1,947 41d2h20m8s 30m23s 10.12.5.39 1,898 41d3h16m33s 31m12s 10.12.5.40 2 1s437ms 718ms 10.12.5.45 1,965 41d4h32m31s 30m11s 10.12.5.46 1,928 41d1h27m26s 30m40s 10.12.5.47 216 4d12h14m30s 30m4s 10.12.5.53 786 5d21h5m51s 10m46s 10.12.5.54 308 6d5h3m59s 29m2s 10.12.5.55 216 4d11h43m18s 29m55s 10.12.5.56 216 4d11h43m55s 29m55s 192.168.201.6 2 20h44m29s 10h22m14s ::1 78 31d5h41m32s 9h36m41s [local] 468 973ms 2ms -
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 110,878 buffers Checkpoint Peak
- 2025-06-10 07:16:10 Date
- 1620.021 seconds Highest write time
- 0.034 seconds Sync time
Checkpoints Wal files
Key values
- 41 files Wal files usage Peak
- 2025-06-09 06:16:08 Date
Checkpoints distance
Key values
- 1,323.32 Mo Distance Peak
- 2025-06-09 06:16:08 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jun 08 00 19,272 1,670.411s 0.004s 1,670.619s 01 2,310 231.57s 0.002s 231.614s 02 2,024 203.266s 0.002s 203.298s 03 4,010 402.77s 0.011s 402.837s 04 8,067 808.92s 0.015s 809.045s 05 5,945 595.978s 0.002s 596.079s 06 5,052 506.981s 0.002s 507.025s 07 608 61.098s 0.002s 61.127s 08 311 31.383s 0.003s 31.414s 09 2,221 223.122s 0.003s 223.155s 10 2,719 272.633s 0.002s 272.676s 11 826 82.623s 0.002s 82.638s 12 89,895 1,782.073s 0.006s 1,782.591s 13 3,795 380.206s 0.003s 380.236s 14 1,865 186.806s 0.004s 186.879s 15 2,101 210.445s 0.004s 210.519s 16 1,660 166.376s 0.003s 166.405s 17 2,541 254.401s 0.004s 254.483s 18 4,140 414.238s 0.004s 414.286s 19 1,811 181.381s 0.002s 181.459s 20 2,403 240.581s 0.003s 240.612s 21 3,637 366.315s 0.011s 366.485s 22 2,034 206.363s 0.01s 206.631s 23 2,707 271.582s 0.008s 271.632s Jun 09 00 21,291 1,619.773s 0.002s 1,620.039s 01 0 0s 0s 0s 02 0 0s 0s 0s 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 66,867 1,846.882s 0.008s 1,847.443s 07 3,504 350.876s 0.004s 350.954s 08 8,583 859.577s 0.004s 859.679s 09 705 70.704s 0.001s 71.145s 10 79,128 1,835.183s 0.006s 1,835.273s 11 2,503 250.762s 0.004s 250.841s 12 2,136 214.078s 0.003s 214.108s 13 1,919 192.273s 0.003s 192.347s 14 2,029 203.193s 0.004s 203.224s 15 2,030 203.336s 0.002s 203.41s 16 2,126 212.995s 0.004s 213.025s 17 1,974 197.786s 0.004s 197.862s 18 1,864 186.665s 0.003s 186.695s 19 2,806 281.137s 0.003s 281.205s 20 1,233 123.788s 0.003s 123.866s 21 635 63.862s 0.002s 63.878s 22 1,094 109.632s 0.003s 109.665s 23 938 94.026s 0.002s 94.088s Jun 10 00 31,783 3,040.798s 0.006s 3,041.1s 01 1,013 101.494s 0.003s 101.526s 02 4,026 403.257s 0.002s 403.385s 03 4,641 464.801s 0.002s 464.899s 04 5,498 550.506s 0.002s 550.641s 05 2,506 251.025s 0.002s 251.055s 06 1,410 141.176s 0.001s 141.204s 07 112,328 1,764.365s 0.021s 1,764.894s 08 12,098 1,211.791s 0.003s 1,211.968s 09 5,933 594.398s 0.003s 594.468s 10 5,493 550.173s 0.004s 550.28s 11 4,735 474.399s 0.003s 474.552s 12 7,474 748.765s 0.002s 748.865s 13 3,092 309.776s 0.002s 309.853s 14 2,193 219.807s 0.003s 219.884s 15 2,216 222.091s 0.004s 222.123s 16 2,123 212.687s 0.002s 212.765s 17 5,407 541.65s 0.004s 541.775s 18 5,954 596.347s 0.002s 596.524s 19 2,521 252.732s 0.004s 252.776s 20 2,415 241.998s 0.002s 242.041s 21 3,561 356.982s 0.002s 357.06s 22 6,397 641.351s 0.002s 641.441s 23 5,625 563.898s 0.001s 563.985s Jun 11 00 24,161 2,421.773s 0.006s 2,421.992s 01 2,706 271.177s 0.003s 271.206s 02 7,267 728.587s 0.003s 728.644s 03 6,327 633.86s 0.002s 633.975s 04 4,865 487.385s 0.004s 487.473s 05 4,441 445.143s 0.004s 445.188s 06 2,966 297.309s 0.003s 297.34s 07 4,757 477.595s 0.004s 477.721s 08 3,129 313.585s 0.002s 313.628s 09 2,867 287.532s 0.035s 287.645s 10 3,859 386.702s 0.003s 386.777s 11 7,350 736.923s 0.002s 737.127s 12 3,074 308.749s 0.003s 308.813s 13 7,770 779.444s 0.003s 779.779s 14 7,520 753.718s 0.003s 753.836s 15 2,639 264.724s 0.003s 264.769s 16 3,113 311.979s 0.003s 312.058s 17 2,477 248.517s 0.004s 248.561s 18 5,177 519.522s 0.003s 519.635s 19 2,469 247.549s 0.003s 247.582s 20 2,521 252.844s 0.004s 252.888s 21 2,707 271.371s 0.002s 271.431s 22 9,277 930.906s 0.004s 931.046s 23 3,381 339.051s 0.002s 339.13s Jun 12 00 17,706 1,685.977s 0.005s 1,686.129s 01 4,442 445.628s 0.003s 445.707s 02 17,637 1,675.179s 0.004s 1,675.337s 03 3,012 302.116s 0.004s 302.169s 04 6,926 693.987s 0.003s 694.103s 05 3,373 338s 0.004s 338.092s 06 5,873 588.537s 0.004s 588.626s 07 11,718 1,174.372s 0.004s 1,174.49s 08 3,682 369.09s 0.004s 369.138s 09 1,976 198.231s 0.004s 198.262s 10 4,156 416.57s 0.003s 416.694s 11 3,403 341.171s 0.003s 341.203s 12 66,769 1,666s 0.008s 1,666.453s 13 2,827 283.185s 0.002s 283.261s 14 3,058 306.837s 0.004s 306.881s 15 3,790 379.907s 0.002s 379.946s 16 2,423 242.817s 0.003s 242.869s 17 1,908 191.162s 0.003s 191.238s 18 4,023 403.188s 0.003s 403.265s 19 1,941 194.686s 0.004s 194.716s 20 4,040 405.06s 0.004s 405.151s 21 2,638 264.552s 0.003s 264.584s 22 3,705 371.774s 0.003s 371.863s 23 5,052 506.322s 0.004s 506.422s Jun 13 00 14,577 1,460.486s 0.003s 1,460.677s 01 2,200 220.7s 0.004s 220.759s 02 1,210 121.243s 0.002s 121.291s 03 6,431 644.437s 0.002s 644.454s Jun 14 03 0 0s 0s 0s 04 0 0s 0s 0s 05 0 0s 0s 0s 06 0 0s 0s 0s 07 0 0s 0s 0s 08 0 0s 0s 0s 09 0 0s 0s 0s 10 0 0s 0s 0s 11 0 0s 0s 0s 12 0 0s 0s 0s 13 0 0s 0s 0s 14 0 0s 0s 0s 15 0 0s 0s 0s 16 0 0.209s 0.001s 0.273s 18 706 0.667s 0.008s 0.705s 19 0 0s 0s 0s 20 863 86.453s 0.002s 86.516s 21 2,409 241.208s 0.004s 241.244s 22 2,269 227.181s 0.003s 227.212s 23 2,610 261.526s 0.004s 261.61s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jun 08 00 0 0 12 70 0.001s 0.002s 01 0 0 1 41 0.001s 0.002s 02 0 0 0 31 0.001s 0.002s 03 0 0 1 36 0.010s 0.002s 04 0 0 4 46 0.014s 0.002s 05 0 0 3 43 0.001s 0.002s 06 0 0 1 128 0.001s 0.002s 07 0 0 0 106 0.001s 0.002s 08 0 0 0 98 0.001s 0.002s 09 0 0 0 120 0.002s 0.002s 10 0 0 1 37 0.001s 0.002s 11 0 0 0 13 0.001s 0.001s 12 0 0 37 71 0.001s 0.003s 13 0 0 0 24 0.001s 0.002s 14 0 0 1 23 0.001s 0.002s 15 0 0 1 28 0.001s 0.002s 16 0 0 0 22 0.001s 0.002s 17 0 0 1 29 0.001s 0.002s 18 0 0 1 42 0.001s 0.002s 19 0 0 1 22 0.001s 0.002s 20 0 0 0 31 0.001s 0.002s 21 0 0 2 47 0.008s 0.002s 22 0 0 1 22 0.005s 0.002s 23 0 0 0 31 0.004s 0.002s Jun 09 00 0 0 14 56 0.001s 0.001s 01 0 0 0 0 0s 0s 02 0 0 0 0 0s 0s 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 42 175 0.005s 0.003s 07 0 0 1 158 0.001s 0.002s 08 0 0 3 141 0.001s 0.002s 09 0 0 33 21 0.001s 0.001s 10 0 0 3 210 0.001s 0.003s 11 0 0 1 132 0.001s 0.002s 12 0 0 0 55 0.001s 0.002s 13 0 0 1 47 0.001s 0.002s 14 0 0 0 90 0.001s 0.002s 15 0 0 1 89 0.001s 0.002s 16 0 0 0 113 0.001s 0.002s 17 0 0 1 34 0.001s 0.002s 18 0 0 0 38 0.001s 0.002s 19 0 0 1 36 0.001s 0.002s 20 0 0 1 25 0.001s 0.002s 21 0 0 0 14 0.001s 0.001s 22 0 0 0 28 0.001s 0.002s 23 0 0 1 24 0.001s 0.001s Jun 10 00 0 0 16 115 0.001s 0.003s 01 0 0 0 37 0.001s 0.002s 02 0 0 2 57 0.001s 0.002s 03 0 0 2 65 0.001s 0.002s 04 0 0 3 57 0.001s 0.002s 05 0 0 0 52 0.001s 0.002s 06 0 0 1 67 0.001s 0.001s 07 0 0 38 222 0.016s 0.003s 08 0 0 7 155 0.001s 0.002s 09 0 0 3 101 0.001s 0.002s 10 0 0 2 140 0.001s 0.002s 11 0 0 2 155 0.001s 0.002s 12 0 0 3 51 0.001s 0.002s 13 0 0 1 113 0.001s 0.002s 14 0 0 1 28 0.001s 0.002s 15 0 0 0 26 0.001s 0.002s 16 0 0 1 41 0.001s 0.002s 17 0 0 2 53 0.002s 0.002s 18 0 0 3 81 0.001s 0.002s 19 0 0 1 29 0.001s 0.002s 20 0 0 1 22 0.001s 0.002s 21 0 0 1 44 0.001s 0.002s 22 0 0 2 44 0.001s 0.002s 23 0 0 3 24 0.001s 0.001s Jun 11 00 0 0 11 122 0.001s 0.003s 01 0 0 0 58 0.001s 0.002s 02 0 0 2 50 0.001s 0.002s 03 0 0 3 58 0.001s 0.002s 04 0 0 2 48 0.001s 0.002s 05 0 0 1 52 0.001s 0.002s 06 0 0 0 57 0.001s 0.002s 07 0 0 2 98 0.002s 0.002s 08 0 0 1 52 0.001s 0.002s 09 0 0 0 86 0.033s 0.002s 10 0 0 1 183 0.001s 0.002s 11 0 0 4 142 0.001s 0.002s 12 0 0 0 91 0.001s 0.002s 13 0 0 4 168 0.001s 0.002s 14 0 0 2 130 0.002s 0.002s 15 0 0 1 80 0.001s 0.002s 16 0 0 1 79 0.001s 0.002s 17 0 0 1 109 0.001s 0.002s 18 0 0 1 37 0.002s 0.002s 19 0 0 0 24 0.001s 0.002s 20 0 0 1 23 0.001s 0.002s 21 0 0 1 20 0.001s 0.001s 22 0 0 5 45 0.001s 0.003s 23 0 0 1 30 0.001s 0.002s Jun 12 00 0 0 9 79 0.001s 0.002s 01 0 0 1 55 0.001s 0.002s 02 0 0 10 48 0.001s 0.002s 03 0 0 1 44 0.001s 0.002s 04 0 0 3 46 0.001s 0.002s 05 0 0 1 37 0.001s 0.002s 06 0 0 2 43 0.001s 0.002s 07 0 0 7 96 0.001s 0.002s 08 0 0 1 134 0.001s 0.002s 09 0 0 0 72 0.001s 0.002s 10 0 0 2 92 0.001s 0.002s 11 0 0 0 74 0.001s 0.002s 12 0 0 34 87 0.004s 0.002s 13 0 0 1 25 0.001s 0.002s 14 0 0 1 38 0.001s 0.002s 15 0 0 0 24 0.001s 0.002s 16 0 0 1 27 0.001s 0.002s 17 0 0 1 22 0.001s 0.002s 18 0 0 1 43 0.001s 0.002s 19 0 0 0 23 0.001s 0.002s 20 0 0 2 23 0.001s 0.002s 21 0 0 0 30 0.001s 0.002s 22 0 0 2 33 0.001s 0.002s 23 0 0 2 61 0.001s 0.002s Jun 13 00 0 0 10 91 0.001s 0.002s 01 0 0 1 38 0.001s 0.002s 02 0 0 1 20 0.001s 0.001s 03 0 0 0 22 0.001s 0.001s Jun 14 03 0 0 0 0 0s 0s 04 0 0 0 0 0s 0s 05 0 0 0 0 0s 0s 06 0 0 0 0 0s 0s 07 0 0 0 0 0s 0s 08 0 0 0 0 0s 0s 09 0 0 0 0 0s 0s 10 0 0 0 0 0s 0s 11 0 0 0 0 0s 0s 12 0 0 0 0 0s 0s 13 0 0 0 0 0s 0s 14 0 0 0 0 0s 0s 15 0 0 0 0 0s 0s 16 0 0 1 0 0s 0s 18 0 0 0 21 0.005s 0.002s 19 0 0 0 0 0s 0s 20 0 0 1 12 0.001s 0.001s 21 0 0 0 42 0.001s 0.002s 22 0 0 0 41 0.001s 0.002s 23 0 0 1 45 0.001s 0.002s Day Hour Count Avg time (sec) Jun 08 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 09 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 10 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 11 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 12 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jun 13 00 0 0s 01 0 0s 02 0 0s 03 0 0s Jun 14 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jun 08 00 101,111.00 kB 189,721.50 kB 01 3,149.50 kB 154,289.00 kB 02 2,760.00 kB 125,479.00 kB 03 4,760.00 kB 102,475.00 kB 04 34,160.00 kB 89,346.00 kB 05 23,155.00 kB 75,191.50 kB 06 7,019.50 kB 63,820.00 kB 07 1,669.50 kB 52,299.00 kB 08 1,132.00 kB 42,581.00 kB 09 3,739.50 kB 35,096.00 kB 10 4,083.50 kB 29,143.50 kB 11 3,399.00 kB 25,410.00 kB 12 200,636.00 kB 536,906.00 kB 13 4,475.50 kB 412,668.50 kB 14 4,238.00 kB 335,016.00 kB 15 5,302.00 kB 272,346.50 kB 16 4,584.00 kB 221,501.00 kB 17 5,676.50 kB 180,427.00 kB 18 8,744.50 kB 147,752.00 kB 19 5,530.50 kB 120,803.00 kB 20 6,700.50 kB 99,050.50 kB 21 11,415.00 kB 82,152.50 kB 22 6,294.00 kB 68,015.00 kB 23 5,114.00 kB 56,170.00 kB Jun 09 00 226,610.00 kB 226,610.00 kB 01 0.00 kB 0.00 kB 02 0.00 kB 0.00 kB 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 228,507.33 kB 612,364.33 kB 07 8,459.50 kB 471,284.00 kB 08 30,143.50 kB 387,567.00 kB 09 1,211.00 kB 330,699.00 kB 10 193,715.33 kB 514,883.00 kB 11 4,288.50 kB 396,003.50 kB 12 4,349.50 kB 321,510.00 kB 13 4,009.00 kB 261,215.00 kB 14 3,979.50 kB 212,330.50 kB 15 4,546.00 kB 172,845.00 kB 16 4,851.00 kB 140,914.50 kB 17 5,279.00 kB 115,148.00 kB 18 4,883.50 kB 94,214.00 kB 19 6,659.00 kB 77,512.00 kB 20 3,674.50 kB 63,693.00 kB 21 1,851.00 kB 54,559.00 kB 22 2,964.50 kB 47,026.50 kB 23 5,575.00 kB 40,848.00 kB Jun 10 00 89,333.67 kB 140,736.33 kB 01 3,055.50 kB 111,850.00 kB 02 14,478.50 kB 92,342.00 kB 03 15,997.00 kB 78,011.50 kB 04 19,078.50 kB 67,186.50 kB 05 7,750.50 kB 56,272.00 kB 06 5,993.00 kB 48,820.00 kB 07 211,676.00 kB 563,290.00 kB 08 54,092.50 kB 441,635.00 kB 09 22,502.50 kB 361,418.00 kB 10 19,597.50 kB 296,671.50 kB 11 10,845.00 kB 243,122.50 kB 12 29,765.00 kB 200,829.00 kB 13 6,782.50 kB 165,967.00 kB 14 6,524.50 kB 135,767.50 kB 15 5,922.00 kB 111,095.00 kB 16 6,731.00 kB 91,240.00 kB 17 14,550.00 kB 76,128.50 kB 18 22,415.00 kB 66,463.00 kB 19 6,641.00 kB 55,076.50 kB 20 7,510.50 kB 46,034.00 kB 21 9,225.00 kB 38,849.00 kB 22 17,624.00 kB 34,289.50 kB 23 42,665.00 kB 42,665.00 kB Jun 11 00 62,156.67 kB 123,506.33 kB 01 3,161.00 kB 134,725.00 kB 02 15,966.50 kB 112,123.00 kB 03 25,430.00 kB 95,711.00 kB 04 10,449.00 kB 78,883.00 kB 05 8,791.50 kB 66,162.00 kB 06 5,487.50 kB 54,527.50 kB 07 11,758.00 kB 46,088.50 kB 08 7,047.50 kB 38,995.00 kB 09 5,177.00 kB 32,585.00 kB 10 7,257.00 kB 27,708.50 kB 11 28,854.00 kB 37,435.50 kB 12 4,904.50 kB 43,593.50 kB 13 32,418.50 kB 56,790.00 kB 14 17,368.00 kB 49,228.00 kB 15 6,717.50 kB 41,212.50 kB 16 5,829.00 kB 34,444.00 kB 17 6,576.50 kB 29,144.50 kB 18 7,528.00 kB 24,902.00 kB 19 7,365.50 kB 21,694.00 kB 20 7,363.00 kB 18,956.50 kB 21 8,895.00 kB 17,397.00 kB 22 27,981.00 kB 60,552.00 kB 23 9,397.00 kB 48,625.00 kB Jun 12 00 72,950.00 kB 136,185.00 kB 01 9,046.50 kB 111,991.50 kB 02 84,928.50 kB 158,776.00 kB 03 4,516.50 kB 129,345.00 kB 04 27,519.50 kB 107,932.50 kB 05 5,029.00 kB 90,397.00 kB 06 17,478.00 kB 76,650.00 kB 07 55,506.50 kB 99,766.00 kB 08 6,555.00 kB 82,097.50 kB 09 4,416.00 kB 67,391.50 kB 10 10,271.00 kB 56,536.50 kB 11 6,284.00 kB 46,920.50 kB 12 280,349.50 kB 528,267.50 kB 13 4,151.00 kB 428,728.00 kB 14 5,292.00 kB 348,220.50 kB 15 6,062.00 kB 283,125.00 kB 16 6,152.50 kB 230,563.50 kB 17 5,655.50 kB 187,829.00 kB 18 6,616.00 kB 153,332.50 kB 19 5,800.50 kB 125,359.50 kB 20 8,656.00 kB 103,021.50 kB 21 7,687.50 kB 85,015.00 kB 22 12,466.00 kB 70,826.50 kB 23 14,626.50 kB 59,988.00 kB Jun 13 00 83,843.00 kB 151,088.50 kB 01 8,292.50 kB 123,974.50 kB 02 8,246.00 kB 106,943.00 kB 03 14,126.00 kB 97,661.00 kB Jun 14 03 0.00 kB 0.00 kB 04 0.00 kB 0.00 kB 05 0.00 kB 0.00 kB 06 0.00 kB 0.00 kB 07 0.00 kB 0.00 kB 08 0.00 kB 0.00 kB 09 0.00 kB 0.00 kB 10 0.00 kB 0.00 kB 11 0.00 kB 0.00 kB 12 0.00 kB 0.00 kB 13 0.00 kB 0.00 kB 14 0.00 kB 0.00 kB 15 0.00 kB 0.00 kB 16 4,735.00 kB 4,735.00 kB 18 706.00 kB 706.00 kB 19 0.00 kB 0.00 kB 20 1,372.00 kB 1,372.00 kB 21 2,922.00 kB 2,922.00 kB 22 3,951.00 kB 4,085.50 kB 23 4,584.50 kB 4,866.00 kB -
Temporary Files
Size of temporary files
Key values
- 13.16 MiB Temp Files size Peak
- 2025-06-11 00:07:04 Date
Number of temporary files
Key values
- 9 per second Temp Files Peak
- 2025-06-08 00:08:55 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jun 08 00 9 9.02 MiB 1.00 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 09 00 9 13.63 MiB 1.51 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 10 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 11 00 9 13.16 MiB 1.46 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 12 00 9 12.66 MiB 1.41 MiB 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jun 13 00 9 13.04 MiB 1.45 MiB 01 0 0 0 02 0 0 0 03 0 0 0 Jun 14 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 45 61.52 MiB 128.00 KiB 3.41 MiB 1.37 MiB vacuum full analyze log_query;-
VACUUM FULL ANALYZE log_query;
Date: 2025-06-13 00:07:45 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 3.41 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-12 00:07:45 ]
2 2.85 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-11 00:07:04 ]
3 2.70 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-13 00:07:45 ]
4 2.61 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-13 00:07:45 ]
5 2.53 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-09 00:09:21 ]
6 2.45 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-08 00:08:55 ]
7 2.26 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-09 00:09:21 ]
8 2.26 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-09 00:09:21 ]
9 2.09 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-08 00:08:55 ]
10 2.09 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-13 00:07:45 ]
11 2.07 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-08 00:08:55 ]
12 2.03 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-13 00:07:45 ]
13 2.02 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-11 00:07:04 ]
14 2.02 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-11 00:07:04 ]
15 1.93 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-11 00:07:04 ]
16 1.79 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-12 00:07:45 ]
17 1.73 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-09 00:09:22 ]
18 1.57 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-12 00:07:45 ]
19 1.55 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-12 00:07:45 ]
20 1.48 MiB VACUUM FULL ANALYZE log_query;[ Date: 2025-06-09 00:09:22 ]
-
Vacuums
Vacuums / Analyzes Distribution
Key values
- 40.79 sec Highest CPU-cost vacuum
Table pubc.log_query
Database ctdprd51 - 2025-06-09 00:02:15 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 40.79 sec Highest CPU-cost vacuum
Table pubc.log_query
Database ctdprd51 - 2025-06-09 00:02:15 Date
Analyzes per table
Key values
- pubc.log_query (115) Main table analyzed (database ctdprd51)
- 127 analyzes Total
Vacuums per table
Key values
- pubc.log_query (191) Main table vacuumed on database ctdprd51
- 200 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 191 34 1,602,202 0 71,339 2 71,903 120,610 13,662 63,479,632 ctdprd51.pg_toast.pg_toast_2619 3 3 12,915 0 4,667 0 29,377 10,923 3,563 2,146,658 ctdprd51.pub1.term_set_enrichment 2 0 6,267 0 3,001 0 0 3,034 4 198,820 ctdprd51.pub1.term_set_enrichment_agent 2 0 263,427 0 89,031 0 0 131,615 8 7,824,596 ctdprd51.pg_catalog.pg_statistic 1 1 741 0 171 0 117 473 155 590,888 ctdprd51.pg_toast.pg_toast_486223 1 0 42 0 4 0 0 8 1 8,798 Total 200 38 1,885,594 14,761 168,213 2 101,397 266,663 17,393 74,249,392 Tuples removed per table
Key values
- pubc.log_query (278472) Main table with removed tuples on database ctdprd51
- 292436 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pubc.log_query 191 34 278,472 19,117,903 14,281,828 0 827,898 ctdprd51.pg_toast.pg_toast_2619 3 3 13,413 66,989 104 0 37,776 ctdprd51.pg_catalog.pg_statistic 1 1 551 3,310 0 0 410 ctdprd51.pub1.term_set_enrichment 2 0 0 946,322 0 0 15,687 ctdprd51.pub1.term_set_enrichment_agent 2 0 0 56,572,793 0 0 642,875 ctdprd51.pg_toast.pg_toast_486223 1 0 0 32 0 0 7 Total 200 38 292,436 76,707,349 14,281,932 0 1,524,653 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pg_catalog.pg_statistic 1 1 551 0 ctdprd51.pg_toast.pg_toast_2619 3 3 13413 0 ctdprd51.pub1.term_set_enrichment 2 0 0 0 ctdprd51.pubc.log_query 191 34 278472 0 ctdprd51.pub1.term_set_enrichment_agent 2 0 0 0 ctdprd51.pg_toast.pg_toast_486223 1 0 0 0 Total 200 38 292,436 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jun 08 00 1 0 01 0 1 02 0 1 03 1 1 04 0 1 05 0 0 06 1 1 07 0 0 08 0 0 09 0 0 10 1 1 11 1 2 12 1 1 13 0 0 14 0 1 15 0 0 16 0 0 17 0 1 18 1 1 19 0 0 20 0 1 21 0 0 22 0 1 23 0 0 Jun 09 00 3 0 01 0 0 02 0 0 03 0 0 04 0 0 05 0 1 06 1 3 07 2 3 08 1 1 09 0 3 10 1 1 11 0 2 12 1 1 13 0 3 14 1 1 15 0 1 16 1 0 17 0 1 18 0 1 19 1 1 20 0 0 21 0 0 22 0 0 23 0 1 Jun 10 00 2 5 01 1 3 02 1 3 03 1 3 04 1 1 05 0 2 06 2 1 07 1 1 08 0 2 09 0 2 10 1 0 11 1 1 12 0 1 13 1 0 14 0 1 15 0 1 16 0 0 17 1 1 18 0 0 19 0 1 20 0 0 21 0 1 22 1 0 23 0 2 Jun 11 00 3 2 01 1 2 02 2 2 03 1 1 04 0 1 05 1 1 06 0 1 07 1 1 08 0 2 09 0 1 10 1 0 11 0 1 12 0 1 13 0 1 14 1 1 15 0 0 16 0 1 17 0 0 18 1 1 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 Jun 12 00 11 2 01 1 2 02 0 2 03 1 1 04 0 1 05 1 1 06 0 1 07 1 1 08 0 1 09 0 0 10 0 1 11 1 0 12 0 3 13 0 0 14 0 1 15 1 0 16 0 1 17 0 0 18 1 1 19 0 0 20 1 1 21 0 0 22 0 0 23 0 1 Jun 13 00 52 2 01 60 2 02 21 1 03 0 1 Jun 14 03 0 0 04 0 0 05 0 0 06 0 0 07 0 0 08 0 0 09 0 0 10 0 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 18 0 0 19 0 0 20 0 1 21 1 2 22 1 3 23 1 2 - 40.79 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 329,745 Total read queries
- 379 Total write queries
Queries by database
Key values
- unknown Main database
- 298,364 Requests
- 6d10h40m32s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 601,509 Requests
User Request type Count Duration editeu Total 2 19s540ms select 2 19s540ms load Total 2 2s222ms select 2 2s222ms postgres Total 81 1h3m47s copy to 81 1h3m47s pubc Total 2 3s925ms others 2 3s925ms pubeu Total 64,144 1d13h57m53s cte 82 4m7s others 12 52s926ms select 64,050 1d13h52m53s qaeu Total 55 2m26s cte 11 39s490ms select 44 1m47s unknown Total 601,509 12d18h49m17s copy to 433 2h27m45s cte 297 13m17s others 30 1m18s select 600,749 12d16h6m56s zbx_monitor Total 12 16s755ms select 12 16s755ms Duration by user
Key values
- 12d18h49m17s (unknown) Main time consuming user
User Request type Count Duration editeu Total 2 19s540ms select 2 19s540ms load Total 2 2s222ms select 2 2s222ms postgres Total 81 1h3m47s copy to 81 1h3m47s pubc Total 2 3s925ms others 2 3s925ms pubeu Total 64,144 1d13h57m53s cte 82 4m7s others 12 52s926ms select 64,050 1d13h52m53s qaeu Total 55 2m26s cte 11 39s490ms select 44 1m47s unknown Total 601,509 12d18h49m17s copy to 433 2h27m45s cte 297 13m17s others 30 1m18s select 600,749 12d16h6m56s zbx_monitor Total 12 16s755ms select 12 16s755ms Queries by host
Key values
- unknown Main host
- 665,807 Requests
- 14d9h54m8s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 330,107 Requests
- 7d6h58s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2025-06-10 23:03:40 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 339,521 1000-10000ms duration
Slowest individual queries
Rank Duration Query 1 8h11m32s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'DEPRESSIVE DISORDER, MAJOR' AND t.object_type_id = 3))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2025-06-13 02:19:38 - Bind query: yes ]
2 21m16s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 14:09:48 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
3 21m13s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:47:39 - Bind query: yes ]
4 20m34s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:45:57 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
5 20m34s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:50:33 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
6 20m33s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:58:00 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
7 20m15s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:56:13 - Bind query: yes ]
8 19m49s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-12 04:14:58 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
9 19m30s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-12 15:56:08 - Bind query: yes ]
10 19m25s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:58:44 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
11 19m12s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 16:31:59 - Bind query: yes ]
12 18m51s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 10:35:41 - Bind query: yes ]
13 18m49s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 12:17:04 - Bind query: yes ]
14 18m47s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 13:01:04 - Bind query: yes ]
15 18m43s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 18:57:40 - Bind query: yes ]
16 18m41s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-10 12:52:17 - Bind query: yes ]
17 18m39s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-12 21:18:29 - Bind query: yes ]
18 18m39s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 10:32:56 - Bind query: yes ]
19 18m36s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-11 11:05:31 - Bind query: yes ]
20 18m36s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2025-06-08 04:03:40 - Bind query: yes ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 5d2h20m30s 293,798 1s297ms 6s219ms 1s499ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 08 00 5,041 2h5m7s 1s489ms 01 5,250 2h9m35s 1s480ms 02 5,807 2h23m34s 1s483ms 03 5,655 2h20m32s 1s491ms 04 5,697 2h20m10s 1s476ms 05 5,469 2h13m7s 1s460ms 06 5,275 2h13m48s 1s521ms 07 5 8s446ms 1s689ms 08 712 17m58s 1s514ms 09 5,521 2h15m5s 1s468ms 10 2,902 1h9m24s 1s434ms 11 15 20s936ms 1s395ms 12 6 8s421ms 1s403ms 13 6 8s160ms 1s360ms 14 9 12s925ms 1s436ms 15 12 17s276ms 1s439ms 16 11 15s402ms 1s400ms 17 8 11s103ms 1s387ms 18 9 12s955ms 1s439ms 19 12 17s224ms 1s435ms 20 18 25s516ms 1s417ms 21 14 25s391ms 1s813ms 22 13 28s276ms 2s175ms 23 12 20s869ms 1s739ms Jun 09 00 3 4s710ms 1s570ms 05 2 2s805ms 1s402ms 06 1 1s384ms 1s384ms 07 1 1s474ms 1s474ms 08 8 11s646ms 1s455ms 09 11 16s23ms 1s456ms 10 23 34s513ms 1s500ms 11 112 2m43s 1s457ms 12 399 9m45s 1s466ms 13 413 10m3s 1s461ms 14 435 10m39s 1s471ms 15 566 13m44s 1s456ms 16 504 12m9s 1s448ms 17 585 14m10s 1s454ms 18 694 16m55s 1s463ms 19 763 18m33s 1s459ms 20 268 6m46s 1s515ms 21 223 6m7s 1s647ms 22 640 15m39s 1s468ms 23 554 13m29s 1s462ms Jun 10 00 360 8m40s 1s447ms 01 463 11m11s 1s449ms 02 490 11m59s 1s468ms 03 534 12m56s 1s453ms 04 623 15m5s 1s453ms 05 720 17m34s 1s465ms 06 811 19m34s 1s448ms 07 886 21m2s 1s424ms 08 1,092 25m58s 1s426ms 09 1,384 34m9s 1s481ms 10 1,485 36m36s 1s479ms 11 1,803 44m40s 1s486ms 12 1,804 44m18s 1s473ms 13 2,146 53m12s 1s487ms 14 2,491 1h1m38s 1s484ms 15 3,113 1h17m24s 1s491ms 16 2,369 59m50s 1s515ms 17 2,456 1h50s 1s486ms 18 3,030 1h15m17s 1s491ms 19 4,056 1h41m32s 1s502ms 20 3,620 1h30m42s 1s503ms 21 3,275 1h21m53s 1s500ms 22 4,299 1h47m59s 1s507ms 23 4,216 1h45m21s 1s499ms Jun 11 00 4,207 1h45m44s 1s508ms 01 4,212 1h45m 1s495ms 02 4,444 1h47m40s 1s453ms 03 2,164 52m21s 1s451ms 04 2,548 1h1m13s 1s441ms 05 2,534 1h1m25s 1s454ms 06 3,013 1h13m25s 1s462ms 07 3,328 1h22m37s 1s489ms 08 3,491 1h26m23s 1s484ms 09 4,449 1h49m26s 1s475ms 10 4,087 1h40m58s 1s482ms 11 3,340 1h22m43s 1s485ms 12 4,735 2h10m58s 1s659ms 13 4,752 1h57m50s 1s487ms 14 4,362 1h47m48s 1s482ms 15 3,690 1h30m43s 1s475ms 16 4,256 1h44m50s 1s478ms 17 4,463 1h51m52s 1s503ms 18 4,607 1h55m24s 1s503ms 19 4,746 1h57m2s 1s479ms 20 5,431 2h14m38s 1s487ms 21 5,725 2h23m12s 1s500ms 22 5,728 2h24m1s 1s508ms 23 4,822 2h3m20s 1s534ms Jun 12 00 3,417 1h29m9s 1s565ms 01 2,736 1h10m49s 1s553ms 02 3,288 1h25m34s 1s561ms 03 3,951 1h44m1s 1s579ms 04 3,506 1h31m34s 1s567ms 05 4,862 2h5m50s 1s553ms 06 2,348 57m52s 1s478ms 07 2,230 56m14s 1s513ms 08 3,723 1h32m20s 1s488ms 09 3,158 1h18m25s 1s490ms 10 3,288 1h21m26s 1s486ms 11 3,079 1h16m35s 1s492ms 12 3,345 1h23m29s 1s497ms 13 3,567 1h28m34s 1s489ms 14 5,539 2h20m16s 1s519ms 15 3,984 1h39m6s 1s492ms 16 3,392 1h24m21s 1s492ms 17 3,279 1h21m21s 1s488ms 18 3,118 1h18m24s 1s508ms 19 3,984 1h41m22s 1s526ms 20 4,622 1h57m45s 1s528ms 21 3,725 1h34m38s 1s524ms 22 3,344 1h25m39s 1s537ms 23 2,282 57m30s 1s512ms Jun 13 00 2,379 1h11s 1s518ms 01 3,505 1h28m58s 1s523ms 02 2,466 1h1m12s 1s489ms 03 1,335 33m3s 1s485ms Jun 14 20 1 2s111ms 2s111ms 23 1 1s564ms 1s564ms [ User: pubeu - Total duration: 11h42m58s - Times executed: 27382 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-06-10 06:15:21 Duration: 6s219ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-06-11 04:33:35 Duration: 5s307ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-06-09 21:50:13 Duration: 5s283ms Database: ctdprd51 User: pubeu Bind query: yes
2 17h54m16s 275 1s209ms 21m16s 3m54s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 08 00 4 7s209ms 1s802ms 01 5 12m3s 2m24s 02 2 4m33s 2m16s 03 4 22m52s 5m43s 04 3 18m40s 6m13s 05 2 18m34s 9m17s 06 3 5s99ms 1s699ms 09 3 8m13s 2m44s 10 2 6s705ms 3s352ms 11 2 3m38s 1m49s 12 3 5s837ms 1s945ms 13 3 18m13s 6m4s 14 2 4s144ms 2s72ms 15 5 9m43s 1m56s 16 2 4s68ms 2s34ms 17 2 5s168ms 2s584ms 18 1 3s347ms 3s347ms 19 5 9m7s 1m49s 20 1 2s491ms 2s491ms 21 2 5m20s 2m40s 22 1 4m31s 4m31s 23 1 5s621ms 5s621ms Jun 09 05 2 4s331ms 2s165ms 06 2 1m51s 55s964ms 07 1 1s908ms 1s908ms 08 3 6s865ms 2s288ms 12 4 9s226ms 2s306ms 13 3 6s333ms 2s111ms 15 4 14m29s 3m37s 16 2 4m9s 2m4s 17 4 9s500ms 2s375ms 18 3 28m37s 9m32s 19 3 4m20s 1m26s 23 4 13m49s 3m27s Jun 10 00 3 18m18s 6m6s 01 2 4m49s 2m24s 02 4 6m41s 1m40s 03 2 5s189ms 2s594ms 04 1 3m40s 3m40s 05 1 3m8s 3m8s 07 1 3s381ms 3s381ms 12 1 18m41s 18m41s 13 1 1s536ms 1s536ms 14 1 1s513ms 1s513ms 15 3 18m35s 6m11s 16 1 1s623ms 1s623ms 19 2 18m32s 9m16s 22 1 3s625ms 3s625ms 23 1 1s608ms 1s608ms Jun 11 00 2 18m34s 9m17s 01 1 1s594ms 1s594ms 02 2 18m31s 9m15s 03 2 5s183ms 2s591ms 04 4 18m26s 4m36s 06 2 18m18s 9m9s 07 3 18m28s 6m9s 08 1 3s490ms 3s490ms 09 2 18m29s 9m14s 10 4 37m36s 9m24s 11 3 18m42s 6m14s 12 24 2h41m32s 6m43s 13 4 37m12s 9m18s 14 5 32m17s 6m27s 15 2 18m18s 9m9s 16 3 37m32s 12m30s 17 1 3s436ms 3s436ms 18 4 37m14s 9m18s 19 2 18m37s 9m18s 20 4 8s543ms 2s135ms 21 4 13s874ms 3s468ms 22 2 5s233ms 2s616ms 23 5 20m27s 4m5s Jun 12 00 2 18m36s 9m18s 01 1 2s525ms 2s525ms 02 4 40m19s 10m4s 03 1 1s625ms 1s625ms 04 1 19m49s 19m49s 06 4 18m27s 4m36s 07 1 1s767ms 1s767ms 08 2 6s999ms 3s499ms 09 6 8m56s 1m29s 10 1 2s79ms 2s79ms 11 3 8s353ms 2s784ms 12 2 6s976ms 3s488ms 13 1 1s651ms 1s651ms 14 5 11s161ms 2s232ms 15 3 19m33s 6m31s 17 2 36m49s 18m24s 18 3 5s668ms 1s889ms 19 5 18m42s 3m44s 20 2 5s378ms 2s689ms 21 5 42m46s 8m33s 22 2 18m29s 9m14s 23 2 3s210ms 1s605ms Jun 13 00 3 5s313ms 1s771ms 01 3 8s490ms 2s830ms 02 1 3s345ms 3s345ms 03 1 2m9s 2m9s Jun 14 20 1 3s878ms 3s878ms 21 1 2s89ms 2s89ms 22 1 2s7ms 2s7ms 23 2 4s196ms 2s98ms [ User: pubeu - Total duration: 3h46m54s - Times executed: 33 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 14:09:48 Duration: 21m16s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:47:39 Duration: 21m13s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:45:57 Duration: 20m34s Database: ctdprd51 User: pubeu Bind query: yes
3 8h11m32s 1 8h11m32s 8h11m32s 8h11m32s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 13 02 1 8h11m32s 8h11m32s -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'DEPRESSIVE DISORDER, MAJOR' AND t.object_type_id = 3))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2025-06-13 02:19:38 Duration: 8h11m32s Bind query: yes
4 3h59m53s 8,922 1s317ms 3s374ms 1s613ms select ;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 08 00 198 5m18s 1s607ms 01 200 5m18s 1s591ms 02 242 6m27s 1s602ms 03 196 5m8s 1s575ms 04 228 5m57s 1s567ms 05 170 4m26s 1s567ms 06 169 4m26s 1s577ms 08 16 25s308ms 1s581ms 09 176 4m32s 1s546ms 10 98 2m29s 1s524ms Jun 09 14 1 1s530ms 1s530ms 15 1 1s529ms 1s529ms 16 11 17s78ms 1s552ms 17 5 8s55ms 1s611ms 18 2 3s244ms 1s622ms 19 9 14s305ms 1s589ms 20 3 5s90ms 1s696ms 21 1 1s663ms 1s663ms 22 9 13s946ms 1s549ms 23 3 4s947ms 1s649ms Jun 10 00 3 4s927ms 1s642ms 02 1 1s827ms 1s827ms 03 1 1s636ms 1s636ms 04 3 4s897ms 1s632ms 05 4 6s408ms 1s602ms 06 12 18s960ms 1s580ms 07 10 15s707ms 1s570ms 08 12 18s652ms 1s554ms 09 22 34s773ms 1s580ms 10 20 32s213ms 1s610ms 11 27 43s681ms 1s617ms 12 54 1m27s 1s620ms 13 43 1m8s 1s600ms 14 69 1m51s 1s614ms 15 114 3m3s 1s610ms 16 54 1m27s 1s622ms 17 64 1m43s 1s623ms 18 96 2m35s 1s624ms 19 159 4m16s 1s610ms 20 123 3m17s 1s606ms 21 99 2m38s 1s598ms 22 133 3m37s 1s634ms 23 152 4m2s 1s595ms Jun 11 00 165 4m24s 1s600ms 01 133 3m33s 1s606ms 02 191 4m58s 1s561ms 03 50 1m17s 1s557ms 04 57 1m27s 1s531ms 05 60 1m34s 1s569ms 06 79 2m6s 1s595ms 07 91 2m27s 1s625ms 08 106 2m49s 1s600ms 09 142 3m46s 1s597ms 10 119 3m7s 1s575ms 11 84 2m13s 1s589ms 12 127 3m35s 1s693ms 13 169 4m33s 1s620ms 14 164 4m23s 1s607ms 15 108 2m53s 1s604ms 16 158 4m11s 1s594ms 17 171 4m35s 1s608ms 18 173 4m34s 1s587ms 19 176 4m41s 1s598ms 20 213 5m42s 1s609ms 21 241 6m26s 1s605ms 22 232 6m14s 1s614ms 23 154 4m13s 1s643ms Jun 12 00 103 2m55s 1s702ms 01 59 1m38s 1s667ms 02 95 2m39s 1s683ms 03 116 3m16s 1s689ms 04 99 2m46s 1s682ms 05 181 5m2s 1s669ms 06 54 1m29s 1s655ms 07 41 1m6s 1s631ms 08 121 3m17s 1s629ms 09 65 1m45s 1s628ms 10 72 1m57s 1s634ms 11 83 2m16s 1s641ms 12 111 3m4s 1s658ms 13 105 2m49s 1s616ms 14 183 4m55s 1s617ms 15 121 3m16s 1s625ms 16 95 2m35s 1s636ms 17 81 2m12s 1s641ms 18 80 2m11s 1s644ms 19 102 2m48s 1s652ms 20 147 4m2s 1s651ms 21 80 2m12s 1s659ms 22 83 2m18s 1s662ms 23 36 59s873ms 1s663ms Jun 13 00 45 1m15s 1s679ms 01 93 2m33s 1s651ms 02 63 1m42s 1s629ms 03 32 52s392ms 1s637ms [ User: pubeu - Total duration: 19m43s - Times executed: 726 ]
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-11 12:38:52 Duration: 3s374ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-11 17:10:38 Duration: 3s374ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-10 16:05:29 Duration: 3s232ms Database: ctdprd51 User: pubeu Bind query: yes
5 3h52m38s 10,321 1s69ms 10s679ms 1s352ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 08 00 47 1m2s 1s333ms 01 39 51s924ms 1s331ms 02 26 34s252ms 1s317ms 03 53 1m11s 1s341ms 04 44 59s421ms 1s350ms 05 34 45s163ms 1s328ms 06 37 51s571ms 1s393ms 08 9 12s741ms 1s415ms 09 52 1m9s 1s337ms 10 24 30s645ms 1s276ms 11 51 1m4s 1s267ms 12 23 29s705ms 1s291ms 13 3 3s833ms 1s277ms 14 41 53s311ms 1s300ms 15 43 55s467ms 1s289ms 16 16 20s486ms 1s280ms 17 5 6s347ms 1s269ms 18 36 45s614ms 1s267ms 19 50 1m4s 1s293ms 20 14 18s474ms 1s319ms 21 13 21s66ms 1s620ms 22 47 2m44s 3s504ms 23 35 1m23s 2s383ms Jun 09 00 2 2s771ms 1s385ms 05 17 22s332ms 1s313ms 06 29 38s318ms 1s321ms 07 43 55s561ms 1s292ms 08 39 51s10ms 1s307ms 09 98 2m12s 1s351ms 10 61 1m21s 1s329ms 11 93 2m 1s299ms 12 104 2m15s 1s306ms 13 87 1m53s 1s303ms 14 77 1m40s 1s304ms 15 99 2m9s 1s305ms 16 85 1m49s 1s286ms 17 105 2m18s 1s315ms 18 110 2m23s 1s300ms 19 101 2m11s 1s300ms 20 37 49s484ms 1s337ms 21 21 38s215ms 1s819ms 22 62 1m22s 1s329ms 23 111 2m25s 1s312ms Jun 10 00 79 1m42s 1s303ms 01 68 1m28s 1s308ms 02 81 1m51s 1s378ms 03 114 2m27s 1s291ms 04 60 1m17s 1s293ms 05 74 1m37s 1s314ms 06 102 3m35s 2s112ms 07 69 1m27s 1s270ms 08 75 1m37s 1s296ms 09 96 2m5s 1s305ms 10 98 2m9s 1s325ms 11 85 1m53s 1s337ms 12 71 1m32s 1s307ms 13 87 1m56s 1s336ms 14 100 2m11s 1s313ms 15 79 1m43s 1s314ms 16 93 2m3s 1s329ms 17 113 2m27s 1s308ms 18 107 2m20s 1s314ms 19 79 1m44s 1s325ms 20 89 1m58s 1s330ms 21 100 2m12s 1s323ms 22 92 2m2s 1s328ms 23 83 1m50s 1s334ms Jun 11 00 81 1m49s 1s346ms 01 86 1m54s 1s326ms 02 71 1m36s 1s358ms 03 65 1m25s 1s321ms 04 76 1m46s 1s404ms 05 80 1m45s 1s312ms 06 91 1m59s 1s318ms 07 99 2m12s 1s335ms 08 94 2m3s 1s311ms 09 99 2m11s 1s333ms 10 94 2m5s 1s340ms 11 93 2m3s 1s322ms 12 95 2m42s 1s712ms 13 107 2m22s 1s332ms 14 58 1m16s 1s326ms 15 116 2m33s 1s320ms 16 85 1m53s 1s332ms 17 127 3m 1s419ms 18 124 2m50s 1s377ms 19 99 2m11s 1s331ms 20 115 2m33s 1s335ms 21 109 2m25s 1s337ms 22 121 2m43s 1s355ms 23 115 2m38s 1s375ms Jun 12 00 129 2m58s 1s386ms 01 117 2m41s 1s376ms 02 114 2m37s 1s380ms 03 99 2m18s 1s401ms 04 97 2m14s 1s386ms 05 160 3m40s 1s379ms 06 103 2m14s 1s307ms 07 104 2m18s 1s332ms 08 97 2m8s 1s320ms 09 106 2m21s 1s334ms 10 116 2m33s 1s320ms 11 158 3m29s 1s326ms 12 93 2m4s 1s341ms 13 97 2m8s 1s320ms 14 123 2m47s 1s361ms 15 168 3m42s 1s323ms 16 119 2m37s 1s322ms 17 104 2m17s 1s317ms 18 102 2m16s 1s333ms 19 125 2m49s 1s357ms 20 116 2m37s 1s358ms 21 164 3m51s 1s412ms 22 111 2m30s 1s355ms 23 97 2m9s 1s334ms Jun 13 00 133 2m57s 1s333ms 01 130 2m53s 1s337ms 02 104 2m16s 1s313ms 03 82 1m47s 1s316ms Jun 14 20 98 1m59s 1s217ms 21 120 2m22s 1s185ms 22 134 2m39s 1s194ms 23 184 3m43s 1s216ms [ User: pubeu - Total duration: 28m34s - Times executed: 1126 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1458082' or receptorTerm.id = '1458082' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 06:15:25 Duration: 10s679ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2069743' or receptorTerm.id = '2069743' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 10s561ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2033215' or receptorTerm.id = '2033215' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 06:15:23 Duration: 9s627ms Database: ctdprd51 User: pubeu Bind query: yes
6 1h57m50s 381 1s121ms 1m19s 18s557ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 08 00 3 51s340ms 17s113ms 03 9 2m48s 18s727ms 04 2 42s226ms 21s113ms 06 3 1m1s 20s619ms 09 3 55s920ms 18s640ms 11 1 1s320ms 1s320ms 14 7 2m9s 18s559ms 18 6 1m52s 18s727ms 19 2 34s153ms 17s76ms 22 3 3m33s 1m11s Jun 09 05 3 48s562ms 16s187ms 06 3 50s795ms 16s931ms 07 4 1m7s 16s921ms 09 6 1m42s 17s72ms 10 3 55s218ms 18s406ms 11 3 47s643ms 15s881ms 12 8 2m34s 19s303ms 14 4 1m13s 18s471ms 15 5 1m32s 18s495ms 16 4 1m10s 17s734ms 17 9 2m37s 17s467ms 18 7 2m2s 17s473ms 19 8 1m56s 14s573ms 20 3 54s763ms 18s254ms 22 6 1m35s 15s945ms 23 3 53s136ms 17s712ms Jun 10 00 9 2m41s 17s991ms 01 9 2m34s 17s115ms 02 3 53s945ms 17s981ms 03 3 51s987ms 17s329ms 04 6 1m42s 17s132ms 05 6 1m31s 15s308ms 06 5 1m26s 17s249ms 07 2 36s903ms 18s451ms 08 3 54s293ms 18s97ms 09 2 20s18ms 10s9ms 10 3 49s963ms 16s654ms 11 9 2m45s 18s334ms 12 6 1m36s 16s128ms 13 14 6m41s 28s659ms 14 1 3s44ms 3s44ms 15 6 1m44s 17s409ms 16 15 4m42s 18s819ms 18 6 1m50s 18s481ms 19 6 1m45s 17s529ms 20 7 1m55s 16s564ms 21 3 53s228ms 17s742ms 22 3 52s156ms 17s385ms 23 7 1m46s 15s148ms Jun 11 00 5 1m39s 19s854ms 01 6 1m41s 16s934ms 02 3 52s898ms 17s632ms 03 3 55s 18s333ms 05 7 1m52s 16s130ms 06 1 1s326ms 1s326ms 09 1 1s121ms 1s121ms 10 1 8s513ms 8s513ms 12 6 2m24s 24s144ms 14 3 53s481ms 17s827ms 18 3 1m21s 27s148ms 20 4 57s325ms 14s331ms 21 12 3m40s 18s384ms 22 9 2m48s 18s726ms Jun 12 01 3 1m6s 22s47ms 03 3 54s258ms 18s86ms 04 3 55s541ms 18s513ms 05 3 56s793ms 18s931ms 06 5 1m30s 18s189ms 07 6 1m49s 18s287ms 09 5 1m30s 18s60ms 10 1 5s48ms 5s48ms 11 3 57s386ms 19s128ms 12 6 1m49s 18s199ms 16 9 2m30s 16s701ms 17 4 1m48s 27s223ms 19 3 55s387ms 18s462ms 21 1 17s339ms 17s339ms 22 3 51s482ms 17s160ms Jun 13 02 1 1s304ms 1s304ms Jun 14 22 3 1m15s 25s69ms 23 3 1m 20s299ms [ User: pubeu - Total duration: 21m6s - Times executed: 63 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102567') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-10 13:16:12 Duration: 1m19s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102635') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-08 22:15:57 Duration: 1m14s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102635') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-08 22:16:13 Duration: 1m13s Database: ctdprd51 User: pubeu Bind query: yes
7 1h32m17s 1,305 1s4ms 27s377ms 4s242ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 08 00 19 1m27s 4s600ms 01 22 1m36s 4s407ms 02 22 1m38s 4s467ms 03 24 1m52s 4s671ms 04 21 1m33s 4s459ms 05 27 1m42s 3s806ms 06 23 1m27s 3s793ms 08 1 1s420ms 1s420ms 09 18 1m9s 3s878ms 10 9 36s242ms 4s26ms 11 2 9s190ms 4s595ms 13 1 1s183ms 1s183ms 14 1 1s28ms 1s28ms 15 1 1s70ms 1s70ms 16 1 7s312ms 7s312ms 17 1 9s116ms 9s116ms 18 1 1s464ms 1s464ms 19 1 13s892ms 13s892ms 20 1 4s926ms 4s926ms 21 2 2s119ms 1s59ms 22 4 29s453ms 7s363ms 23 5 13s571ms 2s714ms Jun 09 00 1 1s707ms 1s707ms 05 1 11s26ms 11s26ms 06 4 19s761ms 4s940ms 07 2 8s831ms 4s415ms 08 4 18s49ms 4s512ms 10 1 2s214ms 2s214ms 11 2 16s964ms 8s482ms 12 3 7s873ms 2s624ms 13 5 36s735ms 7s347ms 14 3 9s404ms 3s134ms 15 3 6s445ms 2s148ms 16 3 6s67ms 2s22ms 17 3 6s280ms 2s93ms 18 2 6s819ms 3s409ms 19 4 20s972ms 5s243ms 20 5 10s479ms 2s95ms 21 2 3s740ms 1s870ms 22 3 6s229ms 2s76ms 23 2 6s792ms 3s396ms Jun 10 00 5 34s479ms 6s895ms 01 2 9s708ms 4s854ms 02 11 58s851ms 5s350ms 03 2 15s270ms 7s635ms 04 3 16s3ms 5s334ms 05 7 28s53ms 4s7ms 06 1 1s413ms 1s413ms 07 2 4s434ms 2s217ms 08 4 14s235ms 3s558ms 09 5 23s741ms 4s748ms 10 5 21s558ms 4s311ms 11 7 31s785ms 4s540ms 12 5 15s771ms 3s154ms 13 7 30s995ms 4s427ms 14 7 39s187ms 5s598ms 15 9 38s56ms 4s228ms 16 10 35s186ms 3s518ms 17 11 32s286ms 2s935ms 18 5 34s624ms 6s924ms 19 18 1m25s 4s729ms 20 17 56s896ms 3s346ms 21 13 45s963ms 3s535ms 22 15 59s385ms 3s959ms 23 12 49s710ms 4s142ms Jun 11 00 11 48s504ms 4s409ms 01 15 59s204ms 3s946ms 02 10 51s90ms 5s109ms 03 11 38s578ms 3s507ms 04 4 29s599ms 7s399ms 05 9 33s508ms 3s723ms 06 8 31s153ms 3s894ms 07 23 1m33s 4s77ms 08 16 1m12s 4s536ms 09 14 49s901ms 3s564ms 10 29 2m3s 4s257ms 11 32 1m40s 3s133ms 12 140 14m16s 6s119ms 13 12 32s589ms 2s715ms 14 17 1m11s 4s211ms 15 7 34s646ms 4s949ms 16 17 59s538ms 3s502ms 17 21 1m7s 3s216ms 18 17 1m22s 4s845ms 19 18 1m2s 3s464ms 20 17 1m7s 3s972ms 21 24 1m56s 4s842ms 22 28 1m38s 3s535ms 23 17 1m9s 4s91ms Jun 12 00 15 50s672ms 3s378ms 01 16 59s413ms 3s713ms 02 14 1m3s 4s506ms 03 18 55s264ms 3s70ms 04 13 49s447ms 3s803ms 05 18 1m14s 4s113ms 06 4 23s895ms 5s973ms 07 7 21s205ms 3s29ms 08 15 44s639ms 2s975ms 09 15 53s559ms 3s570ms 10 19 1m 3s183ms 11 13 53s838ms 4s141ms 12 10 44s689ms 4s468ms 13 18 1m8s 3s819ms 14 20 1m44s 5s232ms 15 11 58s249ms 5s295ms 16 11 33s211ms 3s19ms 17 7 28s82ms 4s11ms 18 12 1m2s 5s173ms 19 6 18s804ms 3s134ms 20 15 46s395ms 3s93ms 21 10 22s800ms 2s280ms 22 4 15s583ms 3s895ms 23 9 26s873ms 2s985ms Jun 13 00 7 22s113ms 3s159ms 01 8 46s338ms 5s792ms 02 9 41s472ms 4s608ms 03 4 10s740ms 2s685ms Jun 14 20 1 6s835ms 6s835ms 21 5 20s132ms 4s26ms 22 3 9s977ms 3s325ms 23 8 19s63ms 2s382ms [ User: pubeu - Total duration: 12m54s - Times executed: 155 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100109') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:39:43 Duration: 27s377ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2106936') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:38:50 Duration: 27s53ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2094859') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:35:27 Duration: 24s784ms Database: ctdprd51 User: pubeu Bind query: yes
8 1h21m28s 466 1s19ms 52s752ms 10s490ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 08 00 2 3s611ms 1s805ms 01 4 25s180ms 6s295ms 02 6 1m1s 10s195ms 03 9 51s70ms 5s674ms 04 7 1m 8s675ms 05 9 1m14s 8s255ms 06 6 37s458ms 6s243ms 09 4 1m8s 17s15ms 10 7 1m17s 11s80ms 11 1 22s867ms 22s867ms 12 3 6s106ms 2s35ms 13 3 11s610ms 3s870ms 14 3 26s180ms 8s726ms 16 7 38s337ms 5s476ms 17 1 3s694ms 3s694ms 18 5 18s512ms 3s702ms 19 3 6s770ms 2s256ms 20 3 26s306ms 8s768ms 21 3 33s463ms 11s154ms 22 5 1m26s 17s342ms 23 1 1s623ms 1s623ms Jun 09 06 2 24s935ms 12s467ms 07 2 10s26ms 5s13ms 10 1 3s288ms 3s288ms 11 5 32s771ms 6s554ms 12 2 3s142ms 1s571ms 13 2 7s216ms 3s608ms 14 2 20s858ms 10s429ms 15 2 15s730ms 7s865ms 16 4 53s179ms 13s294ms 17 2 22s345ms 11s172ms 18 1 4s231ms 4s231ms 19 1 2s151ms 2s151ms 20 2 15s557ms 7s778ms Jun 10 00 2 21s702ms 10s851ms 01 4 28s337ms 7s84ms 02 5 27s164ms 5s432ms 03 2 20s778ms 10s389ms 04 2 21s531ms 10s765ms 06 1 22s917ms 22s917ms 08 1 1s352ms 1s352ms 09 1 23s246ms 23s246ms 11 2 11s265ms 5s632ms 12 1 8s936ms 8s936ms 13 3 45s543ms 15s181ms 14 2 2s952ms 1s476ms 15 4 1m12s 18s113ms 16 1 1s400ms 1s400ms 17 1 10s524ms 10s524ms 18 1 1s503ms 1s503ms 19 3 48s326ms 16s108ms 20 3 21s770ms 7s256ms 21 3 33s4ms 11s1ms 22 4 24s264ms 6s66ms 23 9 1m19s 8s817ms Jun 11 00 3 36s194ms 12s64ms 01 2 10s844ms 5s422ms 02 2 33s768ms 16s884ms 03 4 55s147ms 13s786ms 04 10 1m41s 10s153ms 05 3 34s828ms 11s609ms 06 7 2m1s 17s318ms 07 3 23s58ms 7s686ms 08 10 1m42s 10s232ms 09 4 14s469ms 3s617ms 10 6 1m18s 13s22ms 11 8 1m15s 9s426ms 12 56 16m6s 17s250ms 13 6 1m5s 10s854ms 14 1 12s169ms 12s169ms 15 4 22s165ms 5s541ms 16 8 1m25s 10s669ms 17 7 1m37s 13s928ms 18 7 1m9s 9s990ms 19 2 11s964ms 5s982ms 20 4 1m14s 18s555ms 21 6 59s279ms 9s879ms 22 7 1m33s 13s405ms 23 6 36s622ms 6s103ms Jun 12 00 5 50s155ms 10s31ms 01 1 1s59ms 1s59ms 02 2 14s9ms 7s4ms 03 2 15s920ms 7s960ms 04 3 32s549ms 10s849ms 05 5 1m2s 12s558ms 06 4 51s615ms 12s903ms 07 8 1m 7s505ms 08 3 30s664ms 10s221ms 09 3 15s141ms 5s47ms 10 4 44s579ms 11s144ms 12 4 1m 15s240ms 13 4 7s908ms 1s977ms 14 3 40s988ms 13s662ms 15 3 20s507ms 6s835ms 17 3 49s348ms 16s449ms 19 5 50s582ms 10s116ms 20 10 1m52s 11s292ms 21 5 53s737ms 10s747ms 22 3 8s37ms 2s679ms 23 5 57s773ms 11s554ms Jun 13 00 4 40s175ms 10s43ms 01 5 56s138ms 11s227ms 02 6 1m17s 12s872ms 03 1 11s229ms 11s229ms Jun 14 20 1 4s36ms 4s36ms 21 5 31s643ms 6s328ms 22 3 24s639ms 8s213ms 23 5 36s8ms 7s201ms [ User: pubeu - Total duration: 12m36s - Times executed: 64 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1234207') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:39:53 Duration: 52s752ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1275834') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:38:59 Duration: 47s803ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1276161') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:39:22 Duration: 45s995ms Bind query: yes
9 1h1m9s 1,215 1s 17s652ms 3s20ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 08 00 15 48s119ms 3s207ms 01 8 16s334ms 2s41ms 02 18 59s153ms 3s286ms 03 16 38s789ms 2s424ms 04 17 58s257ms 3s426ms 05 35 1m36s 2s751ms 06 22 1m7s 3s68ms 08 1 1s44ms 1s44ms 09 5 10s761ms 2s152ms 10 12 37s301ms 3s108ms 11 10 38s105ms 3s810ms 12 9 30s749ms 3s416ms 13 9 37s357ms 4s150ms 14 15 57s936ms 3s862ms 15 7 20s685ms 2s955ms 16 9 27s774ms 3s86ms 17 4 12s800ms 3s200ms 18 6 17s289ms 2s881ms 19 10 26s200ms 2s620ms 20 9 32s103ms 3s567ms 21 15 54s757ms 3s650ms 22 7 29s543ms 4s220ms 23 5 14s273ms 2s854ms Jun 09 00 1 2s336ms 2s336ms 06 5 14s391ms 2s878ms 07 7 23s267ms 3s323ms 08 5 12s682ms 2s536ms 09 2 4s315ms 2s157ms 10 4 7s932ms 1s983ms 11 7 24s585ms 3s512ms 12 5 21s585ms 4s317ms 13 11 34s127ms 3s102ms 14 12 45s259ms 3s771ms 15 22 1m9s 3s144ms 16 9 33s33ms 3s670ms 17 23 1m22s 3s566ms 18 8 23s245ms 2s905ms 19 15 38s50ms 2s536ms 20 4 9s454ms 2s363ms 22 1 2s268ms 2s268ms 23 6 26s322ms 4s387ms Jun 10 00 7 24s684ms 3s526ms 01 12 39s540ms 3s295ms 02 11 45s590ms 4s144ms 03 5 11s84ms 2s216ms 04 14 36s338ms 2s595ms 05 22 1m2s 2s828ms 06 3 5s401ms 1s800ms 07 2 2s928ms 1s464ms 09 1 6s779ms 6s779ms 10 11 32s652ms 2s968ms 11 22 1m 2s735ms 12 3 4s819ms 1s606ms 13 1 1s525ms 1s525ms 15 3 9s913ms 3s304ms 16 2 2s836ms 1s418ms 17 3 6s831ms 2s277ms 18 1 3s439ms 3s439ms 19 6 17s372ms 2s895ms 20 21 56s270ms 2s679ms 21 15 37s60ms 2s470ms 22 3 5s981ms 1s993ms 23 1 1s23ms 1s23ms Jun 11 00 4 10s326ms 2s581ms 01 5 20s792ms 4s158ms 02 9 19s301ms 2s144ms 03 17 46s810ms 2s753ms 04 18 45s512ms 2s528ms 05 16 36s674ms 2s292ms 06 2 9s261ms 4s630ms 07 34 1m29s 2s642ms 08 5 24s817ms 4s963ms 09 8 17s283ms 2s160ms 10 5 20s700ms 4s140ms 11 8 21s983ms 2s747ms 12 50 2m19s 2s796ms 13 11 33s142ms 3s12ms 14 9 32s495ms 3s610ms 15 14 50s78ms 3s577ms 16 16 39s495ms 2s468ms 17 31 1m23s 2s685ms 18 7 26s749ms 3s821ms 19 2 4s689ms 2s344ms 20 8 19s10ms 2s376ms 21 10 47s480ms 4s748ms 22 6 12s910ms 2s151ms 23 5 19s538ms 3s907ms Jun 12 00 11 32s896ms 2s990ms 01 4 12s915ms 3s228ms 02 7 14s820ms 2s117ms 03 9 31s822ms 3s535ms 04 5 10s299ms 2s59ms 05 11 32s233ms 2s930ms 06 4 10s343ms 2s585ms 07 7 18s977ms 2s711ms 08 7 23s594ms 3s370ms 09 7 18s785ms 2s683ms 10 11 31s670ms 2s879ms 11 10 45s26ms 4s502ms 12 35 1m35s 2s720ms 13 8 25s360ms 3s170ms 14 42 2m1s 2s881ms 15 8 29s253ms 3s656ms 16 3 9s577ms 3s192ms 17 6 14s500ms 2s416ms 18 4 14s119ms 3s529ms 19 7 30s614ms 4s373ms 20 6 20s307ms 3s384ms 21 13 51s367ms 3s951ms 22 7 19s452ms 2s778ms 23 19 56s355ms 2s966ms Jun 13 00 22 53s907ms 2s450ms 01 18 56s188ms 3s121ms 02 4 12s136ms 3s34ms 03 3 7s 2s333ms Jun 14 20 9 42s384ms 4s709ms 21 11 33s59ms 3s5ms 22 9 21s218ms 2s357ms 23 8 19s585ms 2s448ms [ User: pubeu - Total duration: 9m1s - Times executed: 169 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1279518'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-14 20:13:02 Duration: 17s652ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1451245'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:38:33 Duration: 11s321ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:35:07 Duration: 10s937ms Bind query: yes
10 1h21s 761 4s148ms 20s233ms 4s759ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 08 01 1 4s865ms 4s865ms 02 23 1m47s 4s679ms 03 23 1m51s 4s842ms 04 13 1m 4s666ms 09 2 10s54ms 5s27ms 10 11 50s612ms 4s601ms 13 1 4s389ms 4s389ms 15 2 8s934ms 4s467ms 21 1 12s87ms 12s87ms 22 1 16s31ms 16s31ms 23 2 15s996ms 7s998ms Jun 09 05 3 13s223ms 4s407ms 06 1 4s713ms 4s713ms 07 5 24s133ms 4s826ms 08 1 4s316ms 4s316ms 09 3 13s820ms 4s606ms 10 2 9s220ms 4s610ms 12 1 4s490ms 4s490ms 14 1 4s454ms 4s454ms 15 2 8s958ms 4s479ms 21 1 4s947ms 4s947ms 22 1 4s509ms 4s509ms 23 4 18s286ms 4s571ms Jun 10 01 3 30s409ms 10s136ms 02 2 8s834ms 4s417ms 03 2 8s443ms 4s221ms 04 2 8s618ms 4s309ms 05 2 8s898ms 4s449ms 06 3 13s293ms 4s431ms 07 2 11s374ms 5s687ms 08 3 13s501ms 4s500ms 09 3 13s809ms 4s603ms 10 6 27s115ms 4s519ms 11 25 1m54s 4s566ms 12 16 1m13s 4s624ms 13 9 40s969ms 4s552ms 14 34 2m34s 4s535ms 15 27 2m2s 4s543ms 16 7 35s920ms 5s131ms 17 1 4s683ms 4s683ms 22 1 4s413ms 4s413ms Jun 11 00 5 24s156ms 4s831ms 01 9 41s124ms 4s569ms 02 10 45s294ms 4s529ms 03 6 26s503ms 4s417ms 04 10 1m15s 7s561ms 05 25 1m52s 4s486ms 06 11 50s101ms 4s554ms 07 7 32s672ms 4s667ms 08 3 13s613ms 4s537ms 09 1 4s411ms 4s411ms 10 1 4s858ms 4s858ms 12 4 19s343ms 4s835ms 13 1 4s706ms 4s706ms 14 12 54s321ms 4s526ms 15 7 32s955ms 4s707ms 16 4 18s733ms 4s683ms 18 1 4s608ms 4s608ms 19 2 9s21ms 4s510ms 20 1 4s922ms 4s922ms 23 1 4s823ms 4s823ms Jun 12 01 3 14s560ms 4s853ms 02 51 4m3s 4s783ms 03 79 6m21s 4s833ms 04 5 23s806ms 4s761ms 05 1 5s155ms 5s155ms 06 2 8s971ms 4s485ms 07 44 3m27s 4s716ms 08 49 3m42s 4s534ms 09 55 4m13s 4s613ms 10 19 1m26s 4s546ms 11 5 22s988ms 4s597ms 12 16 1m20s 5s35ms 13 15 1m8s 4s555ms 14 15 1m13s 4s898ms 15 7 32s78ms 4s582ms 16 1 4s558ms 4s558ms 20 1 5s386ms 5s386ms 21 1 5s933ms 5s933ms 22 2 9s34ms 4s517ms 23 2 9s73ms 4s536ms Jun 13 00 3 13s981ms 4s660ms 01 2 9s164ms 4s582ms 02 3 13s681ms 4s560ms 03 1 4s419ms 4s419ms Jun 14 20 1 4s148ms 4s148ms 21 1 4s765ms 4s765ms 23 3 15s53ms 5s17ms [ User: pubeu - Total duration: 6m29s - Times executed: 76 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-11 04:10:46 Duration: 20s233ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-10 01:46:26 Duration: 19s276ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-11 04:10:53 Duration: 19s170ms Bind query: yes
11 47m58s 1,168 1s 20s534ms 2s464ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 08 00 17 39s498ms 2s323ms 01 10 21s258ms 2s125ms 02 10 34s170ms 3s417ms 03 11 30s956ms 2s814ms 04 10 21s843ms 2s184ms 05 33 1m15s 2s286ms 06 30 1m12s 2s418ms 08 2 5s668ms 2s834ms 09 6 12s159ms 2s26ms 10 12 26s648ms 2s220ms 11 11 25s145ms 2s285ms 12 11 22s847ms 2s77ms 13 10 23s326ms 2s332ms 14 7 15s198ms 2s171ms 15 13 34s529ms 2s656ms 16 8 24s43ms 3s5ms 17 3 10s708ms 3s569ms 18 5 13s576ms 2s715ms 19 6 15s756ms 2s626ms 20 11 28s217ms 2s565ms 21 13 37s257ms 2s865ms 22 10 1m2s 6s291ms 23 8 21s665ms 2s708ms Jun 09 00 1 2s148ms 2s148ms 06 1 4s565ms 4s565ms 07 6 16s767ms 2s794ms 08 7 16s836ms 2s405ms 09 4 15s386ms 3s846ms 10 3 6s500ms 2s166ms 11 4 9s971ms 2s492ms 12 6 15s85ms 2s514ms 13 12 18s484ms 1s540ms 14 8 14s523ms 1s815ms 15 19 42s727ms 2s248ms 16 8 24s296ms 3s37ms 17 28 1m12s 2s606ms 18 6 16s67ms 2s677ms 19 14 43s147ms 3s81ms 20 4 7s947ms 1s986ms 22 2 2s291ms 1s145ms 23 8 22s498ms 2s812ms Jun 10 00 10 25s13ms 2s501ms 01 8 23s591ms 2s948ms 02 7 17s623ms 2s517ms 03 5 10s346ms 2s69ms 04 14 31s753ms 2s268ms 05 19 47s324ms 2s490ms 06 3 3s505ms 1s168ms 07 2 5s246ms 2s623ms 09 2 4s192ms 2s96ms 10 10 22s256ms 2s225ms 11 21 47s725ms 2s272ms 13 2 5s918ms 2s959ms 14 4 11s921ms 2s980ms 15 6 13s628ms 2s271ms 16 3 8s965ms 2s988ms 17 2 8s741ms 4s370ms 18 1 3s164ms 3s164ms 19 5 14s670ms 2s934ms 20 22 57s976ms 2s635ms 21 15 30s873ms 2s58ms 22 1 1s134ms 1s134ms 23 7 9s458ms 1s351ms Jun 11 00 3 10s112ms 3s370ms 01 3 9s100ms 3s33ms 02 5 15s710ms 3s142ms 03 15 35s350ms 2s356ms 04 24 53s65ms 2s211ms 05 14 32s987ms 2s356ms 06 7 15s30ms 2s147ms 07 33 1m9s 2s106ms 08 6 9s575ms 1s595ms 09 11 22s789ms 2s71ms 10 8 19s863ms 2s482ms 11 12 24s465ms 2s38ms 12 50 2m20s 2s806ms 13 10 22s146ms 2s214ms 14 6 15s74ms 2s512ms 15 9 19s554ms 2s172ms 16 13 32s24ms 2s463ms 17 31 1m11s 2s311ms 18 7 16s248ms 2s321ms 19 16 40s9ms 2s500ms 20 9 17s75ms 1s897ms 21 12 26s665ms 2s222ms 22 9 19s811ms 2s201ms 23 5 5s912ms 1s182ms Jun 12 00 5 15s751ms 3s150ms 01 10 24s51ms 2s405ms 02 5 16s116ms 3s223ms 03 6 18s652ms 3s108ms 04 7 13s412ms 1s916ms 05 6 16s324ms 2s720ms 06 9 19s449ms 2s161ms 07 5 11s407ms 2s281ms 08 3 5s466ms 1s822ms 09 8 15s757ms 1s969ms 10 6 11s405ms 1s900ms 11 10 23s918ms 2s391ms 12 31 1m13s 2s356ms 13 3 9s787ms 3s262ms 14 41 1m33s 2s274ms 15 3 7s23ms 2s341ms 16 5 17s330ms 3s466ms 17 5 12s776ms 2s555ms 18 4 15s408ms 3s852ms 19 6 11s296ms 1s882ms 20 7 17s867ms 2s552ms 21 7 18s485ms 2s640ms 22 4 9s734ms 2s433ms 23 13 36s207ms 2s785ms Jun 13 00 20 53s734ms 2s686ms 01 15 32s926ms 2s195ms 02 5 11s907ms 2s381ms 03 2 8s703ms 4s351ms Jun 14 20 1 4s472ms 4s472ms 21 11 34s200ms 3s109ms 22 10 20s23ms 2s2ms 23 10 21s923ms 2s192ms [ User: pubeu - Total duration: 6m30s - Times executed: 149 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-11 12:38:47 Duration: 20s534ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-08 22:25:40 Duration: 15s105ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1449732') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1449732') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-08 22:33:43 Duration: 11s277ms Bind query: yes
12 47m25s 6 6m43s 9m19s 7m54s select maint_query_logs_archive ();Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 08 00 1 8m53s 8m53s Jun 09 00 1 9m19s 9m19s Jun 10 00 1 6m43s 6m43s Jun 11 00 1 7m2s 7m2s Jun 12 00 1 7m43s 7m43s Jun 13 00 1 7m43s 7m43s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-06-09 00:09:21 Duration: 9m19s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-06-08 00:08:54 Duration: 8m53s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-06-13 00:07:44 Duration: 7m43s
13 36m56s 165 1s26ms 3m11s 13s436ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 08 06 24 2m4s 5s201ms 07 1 4s195ms 4s195ms 09 11 13s954ms 1s268ms 11 10 16s364ms 1s636ms 12 1 2s688ms 2s688ms 13 3 6s338ms 2s112ms 21 1 1s26ms 1s26ms 22 15 1m44s 6s961ms 23 6 3m53s 38s967ms Jun 09 00 7 5m15s 45s88ms 08 8 5m26s 40s823ms 10 3 1m38s 32s899ms 11 1 1s129ms 1s129ms 12 1 2s714ms 2s714ms 16 1 1s222ms 1s222ms 18 1 2s298ms 2s298ms 20 2 1m35s 47s780ms 21 8 3m16s 24s589ms Jun 10 01 2 2s530ms 1s265ms 02 3 2m24s 48s247ms 04 2 1m24s 42s174ms 09 14 50s710ms 3s622ms 12 1 1s683ms 1s683ms Jun 11 01 1 1s238ms 1s238ms 03 3 2m22s 47s553ms 10 2 49s336ms 24s668ms 11 1 1s863ms 1s863ms 23 1 10s428ms 10s428ms Jun 12 03 1 1s790ms 1s790ms 07 5 52s777ms 10s555ms 11 3 6s263ms 2s87ms 17 3 7s160ms 2s386ms 22 2 43s57ms 21s528ms 23 1 1s712ms 1s712ms Jun 13 00 1 3s678ms 3s678ms 03 1 2s77ms 2s77ms Jun 14 20 2 3s126ms 1s563ms 21 4 9s719ms 2s429ms 22 6 30s421ms 5s70ms 23 2 17s448ms 8s724ms [ User: pubeu - Total duration: 16m2s - Times executed: 54 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2105953') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-06-08 23:21:45 Duration: 3m11s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2099568') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-06-09 00:14:13 Duration: 2m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2099635') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-06-10 02:39:39 Duration: 51s533ms Database: ctdprd51 User: pubeu Bind query: yes
14 35m1s 331 1s 32s848ms 6s349ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 08 00 3 24s769ms 8s256ms 01 2 18s768ms 9s384ms 02 3 22s196ms 7s398ms 03 4 11s788ms 2s947ms 04 5 6s222ms 1s244ms 05 2 2s249ms 1s124ms 06 4 22s586ms 5s646ms 09 7 21s353ms 3s50ms 10 2 20s333ms 10s166ms 11 3 23s297ms 7s765ms 12 1 1s309ms 1s309ms 13 3 9s47ms 3s15ms 14 1 1s162ms 1s162ms 15 3 8s393ms 2s797ms 16 3 18s127ms 6s42ms 17 2 6s99ms 3s49ms 18 3 24s475ms 8s158ms 19 3 35s50ms 11s683ms 20 3 32s661ms 10s887ms 21 5 40s514ms 8s102ms 22 8 51s148ms 6s393ms 23 2 16s152ms 8s76ms Jun 09 00 1 1s116ms 1s116ms 07 1 6s457ms 6s457ms 08 1 3s148ms 3s148ms 09 1 2s874ms 2s874ms 10 2 2s222ms 1s111ms 12 3 25s147ms 8s382ms 13 2 12s904ms 6s452ms 14 2 18s896ms 9s448ms 15 2 12s895ms 6s447ms 16 3 23s241ms 7s747ms 17 4 35s957ms 8s989ms 18 3 4s564ms 1s521ms 19 1 3s116ms 3s116ms 20 2 4s868ms 2s434ms 22 4 22s127ms 5s531ms 23 3 3s472ms 1s157ms Jun 10 00 3 17s380ms 5s793ms 01 1 3s691ms 3s691ms 02 1 16s917ms 16s917ms 03 3 39s478ms 13s159ms 04 3 7s397ms 2s465ms 07 1 1s91ms 1s91ms 10 2 19s450ms 9s725ms 11 1 1s170ms 1s170ms 12 2 18s153ms 9s76ms 13 1 17s567ms 17s567ms 15 2 2s198ms 1s99ms 16 2 35s362ms 17s681ms 17 2 18s412ms 9s206ms 19 1 1s124ms 1s124ms 20 2 2s278ms 1s139ms 22 2 19s483ms 9s741ms 23 5 22s652ms 4s530ms Jun 11 00 3 54s349ms 18s116ms 01 2 2s370ms 1s185ms 02 1 17s470ms 17s470ms 04 3 36s127ms 12s42ms 05 2 19s438ms 9s719ms 06 6 39s317ms 6s552ms 07 3 21s459ms 7s153ms 08 5 27s878ms 5s575ms 09 8 59s580ms 7s447ms 10 4 25s936ms 6s484ms 11 4 23s111ms 5s777ms 12 27 2m17s 5s102ms 13 4 39s268ms 9s817ms 14 2 35s774ms 17s887ms 15 3 21s732ms 7s244ms 16 3 22s17ms 7s339ms 17 3 5s714ms 1s904ms 18 6 57s1ms 9s500ms 19 2 2s258ms 1s129ms 20 4 22s517ms 5s629ms 21 6 23s846ms 3s974ms 22 7 1m 8s593ms 23 2 13s809ms 6s904ms Jun 12 00 5 22s562ms 4s512ms 01 3 22s204ms 7s401ms 02 4 22s287ms 5s571ms 03 8 1m9s 8s722ms 04 2 2s475ms 1s237ms 05 4 4s742ms 1s185ms 06 2 3s485ms 1s742ms 07 2 8s160ms 4s80ms 08 2 20s348ms 10s174ms 09 1 3s899ms 3s899ms 11 3 27s600ms 9s200ms 12 3 14s232ms 4s744ms 13 5 33s90ms 6s618ms 14 4 25s371ms 6s342ms 15 1 1s120ms 1s120ms 16 3 42s172ms 14s57ms 17 1 17s385ms 17s385ms 18 1 17s605ms 17s605ms 19 2 13s933ms 6s966ms 20 2 2s395ms 1s197ms 21 5 25s632ms 5s126ms 22 1 1s161ms 1s161ms 23 2 6s36ms 3s18ms Jun 13 00 3 31s643ms 10s547ms 01 5 10s769ms 2s153ms 02 2 18s974ms 9s487ms 03 1 4s926ms 4s926ms Jun 14 21 1 1s377ms 1s377ms 23 2 12s718ms 6s359ms [ User: pubeu - Total duration: 4m48s - Times executed: 43 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-08 22:24:57 Duration: 32s848ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:40:05 Duration: 29s238ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:25:41 Duration: 20s790ms Bind query: yes
15 31m51s 1,201 1s479ms 4s545ms 1s591ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 08 00 28 44s379ms 1s584ms 01 25 39s231ms 1s569ms 02 37 58s549ms 1s582ms 03 57 1m30s 1s588ms 04 47 1m15s 1s606ms 05 48 1m16s 1s590ms 06 53 1m25s 1s604ms 07 1 1s777ms 1s777ms 08 9 14s421ms 1s602ms 09 57 1m30s 1s595ms 10 57 1m29s 1s565ms 11 4 6s137ms 1s534ms 12 1 1s528ms 1s528ms 13 4 6s156ms 1s539ms 14 4 6s302ms 1s575ms 15 4 6s185ms 1s546ms 16 7 10s740ms 1s534ms 17 4 6s247ms 1s561ms 18 1 1s524ms 1s524ms 19 6 9s238ms 1s539ms 20 5 7s682ms 1s536ms 21 4 7s323ms 1s830ms 22 4 10s726ms 2s681ms 23 5 8s572ms 1s714ms Jun 09 00 21 32s484ms 1s546ms 05 2 3s112ms 1s556ms 06 3 4s690ms 1s563ms 07 4 6s240ms 1s560ms 08 2 3s81ms 1s540ms 10 3 4s677ms 1s559ms 11 2 3s73ms 1s536ms 12 4 6s220ms 1s555ms 13 3 4s670ms 1s556ms 14 6 9s290ms 1s548ms 15 7 11s13ms 1s573ms 16 4 6s272ms 1s568ms 17 3 4s707ms 1s569ms 18 3 4s670ms 1s556ms 19 6 9s377ms 1s562ms 20 1 1s611ms 1s611ms 21 1 1s580ms 1s580ms 22 1 1s541ms 1s541ms 23 1 1s565ms 1s565ms Jun 10 00 1 1s620ms 1s620ms 02 3 4s666ms 1s555ms 03 4 6s269ms 1s567ms 04 1 1s585ms 1s585ms 05 3 4s706ms 1s568ms 06 1 1s539ms 1s539ms 07 2 3s56ms 1s528ms 10 2 3s181ms 1s590ms 11 1 1s528ms 1s528ms 12 5 7s823ms 1s564ms 14 1 1s553ms 1s553ms 15 2 3s355ms 1s677ms 16 11 18s712ms 1s701ms 17 18 28s112ms 1s561ms 18 7 10s859ms 1s551ms 19 11 17s189ms 1s562ms 20 4 6s267ms 1s566ms 21 1 1s557ms 1s557ms 22 3 4s704ms 1s568ms 23 1 1s522ms 1s522ms Jun 11 00 12 19s133ms 1s594ms 01 2 3s129ms 1s564ms 02 9 14s81ms 1s564ms 03 5 7s699ms 1s539ms 04 3 4s606ms 1s535ms 05 4 6s247ms 1s561ms 06 6 9s274ms 1s545ms 07 6 9s311ms 1s551ms 08 8 12s518ms 1s564ms 09 15 23s595ms 1s573ms 10 15 23s370ms 1s558ms 11 15 23s762ms 1s584ms 12 10 19s835ms 1s983ms 13 4 6s299ms 1s574ms 14 11 17s390ms 1s580ms 15 13 20s490ms 1s576ms 16 12 18s716ms 1s559ms 17 16 25s376ms 1s586ms 18 12 18s990ms 1s582ms 19 8 12s599ms 1s574ms 20 9 14s474ms 1s608ms 21 11 17s458ms 1s587ms 22 10 17s821ms 1s782ms 23 6 9s489ms 1s581ms Jun 12 00 7 11s259ms 1s608ms 01 2 3s305ms 1s652ms 02 4 6s521ms 1s630ms 03 3 4s814ms 1s604ms 04 4 6s377ms 1s594ms 05 16 25s245ms 1s577ms 06 5 7s923ms 1s584ms 07 12 19s450ms 1s620ms 08 20 31s592ms 1s579ms 09 12 18s833ms 1s569ms 10 5 7s905ms 1s581ms 11 16 25s41ms 1s565ms 12 28 44s393ms 1s585ms 13 10 15s709ms 1s570ms 14 16 25s662ms 1s603ms 15 14 22s40ms 1s574ms 16 22 34s864ms 1s584ms 17 9 14s88ms 1s565ms 18 11 17s335ms 1s575ms 19 17 27s121ms 1s595ms 20 4 6s477ms 1s619ms 21 13 20s379ms 1s567ms 22 29 46s235ms 1s594ms 23 10 15s544ms 1s554ms Jun 13 00 18 28s523ms 1s584ms 01 6 9s464ms 1s577ms 02 15 23s479ms 1s565ms 03 7 11s56ms 1s579ms Jun 14 20 5 8s366ms 1s673ms 21 3 4s763ms 1s587ms 22 2 3s194ms 1s597ms 23 3 4s725ms 1s575ms [ User: pubeu - Total duration: 3m28s - Times executed: 123 ]
[ User: qaeu - Total duration: 7s938ms - Times executed: 5 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-06-11 12:38:37 Duration: 4s545ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-06-11 22:53:02 Duration: 3s343ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-06-08 22:24:38 Duration: 3s98ms Database: ctdprd51 User: pubeu Bind query: yes
16 28m35s 1,152 1s192ms 5s303ms 1s488ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 08 00 7 10s248ms 1s464ms 01 1 1s400ms 1s400ms 03 8 11s891ms 1s486ms 04 5 7s453ms 1s490ms 05 5 7s452ms 1s490ms 06 9 13s882ms 1s542ms 08 4 6s179ms 1s544ms 09 8 12s128ms 1s516ms 10 3 4s491ms 1s497ms 11 3 4s211ms 1s403ms 12 1 1s461ms 1s461ms 13 3 4s282ms 1s427ms 14 2 2s936ms 1s468ms 15 3 4s308ms 1s436ms 16 3 4s284ms 1s428ms 17 1 1s702ms 1s702ms 18 1 1s487ms 1s487ms 19 7 9s938ms 1s419ms 20 1 1s420ms 1s420ms 21 3 4s705ms 1s568ms 22 6 23s638ms 3s939ms 23 4 8s182ms 2s45ms Jun 09 05 5 7s355ms 1s471ms 06 4 6s49ms 1s512ms 07 3 4s262ms 1s420ms 08 4 5s812ms 1s453ms 09 7 9s754ms 1s393ms 10 8 12s56ms 1s507ms 11 8 11s521ms 1s440ms 12 13 18s946ms 1s457ms 13 15 21s877ms 1s458ms 14 6 8s710ms 1s451ms 15 15 21s400ms 1s426ms 16 8 11s432ms 1s429ms 17 12 18s74ms 1s506ms 18 8 11s828ms 1s478ms 19 17 24s326ms 1s430ms 20 4 6s110ms 1s527ms 21 4 12s664ms 3s166ms 22 12 17s907ms 1s492ms 23 21 31s128ms 1s482ms Jun 10 00 7 10s265ms 1s466ms 01 6 9s64ms 1s510ms 02 18 26s783ms 1s487ms 03 11 15s802ms 1s436ms 04 9 12s805ms 1s422ms 05 16 23s317ms 1s457ms 06 19 26s828ms 1s412ms 07 9 12s751ms 1s416ms 08 10 13s998ms 1s399ms 09 11 15s971ms 1s451ms 10 11 15s936ms 1s448ms 11 14 20s383ms 1s455ms 12 12 17s139ms 1s428ms 13 14 20s505ms 1s464ms 14 19 28s56ms 1s476ms 15 10 14s567ms 1s456ms 16 13 19s89ms 1s468ms 17 11 16s254ms 1s477ms 18 13 19s66ms 1s466ms 19 4 5s973ms 1s493ms 20 9 13s261ms 1s473ms 21 12 17s557ms 1s463ms 22 15 22s47ms 1s469ms 23 5 7s342ms 1s468ms Jun 11 00 12 17s525ms 1s460ms 01 15 22s205ms 1s480ms 02 8 11s446ms 1s430ms 03 5 7s492ms 1s498ms 04 7 10s143ms 1s449ms 05 15 22s475ms 1s498ms 06 7 10s832ms 1s547ms 07 10 14s992ms 1s499ms 08 8 11s635ms 1s454ms 09 7 10s518ms 1s502ms 10 10 15s71ms 1s507ms 11 14 20s630ms 1s473ms 12 13 21s468ms 1s651ms 13 6 8s771ms 1s461ms 15 15 22s167ms 1s477ms 16 14 21s80ms 1s505ms 17 9 13s264ms 1s473ms 18 8 12s449ms 1s556ms 19 9 13s405ms 1s489ms 20 8 11s901ms 1s487ms 21 17 25s372ms 1s492ms 22 13 19s299ms 1s484ms 23 7 10s849ms 1s549ms Jun 12 00 8 12s229ms 1s528ms 01 9 14s138ms 1s570ms 02 14 21s300ms 1s521ms 03 7 10s960ms 1s565ms 04 8 11s816ms 1s477ms 05 11 17s427ms 1s584ms 06 4 5s896ms 1s474ms 07 9 13s372ms 1s485ms 08 7 10s88ms 1s441ms 09 13 18s974ms 1s459ms 10 10 14s589ms 1s458ms 11 10 14s773ms 1s477ms 12 16 23s277ms 1s454ms 13 6 8s875ms 1s479ms 14 11 16s546ms 1s504ms 15 12 17s548ms 1s462ms 16 10 14s810ms 1s481ms 17 6 8s730ms 1s455ms 18 7 10s226ms 1s460ms 19 8 11s830ms 1s478ms 20 12 18s91ms 1s507ms 21 11 16s886ms 1s535ms 22 19 29s90ms 1s531ms 23 10 15s39ms 1s503ms Jun 13 00 11 16s518ms 1s501ms 01 18 26s693ms 1s482ms 02 11 16s113ms 1s464ms 03 2 2s970ms 1s485ms Jun 14 20 12 16s26ms 1s335ms 21 18 23s661ms 1s314ms 22 25 33s615ms 1s344ms 23 40 54s286ms 1s357ms [ User: pubeu - Total duration: 3m35s - Times executed: 132 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1245710') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1245710') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 22:33:12 Duration: 5s303ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1256281') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1256281') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 22:31:51 Duration: 4s949ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232011') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232011') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-09 21:50:13 Duration: 4s905ms Database: ctdprd51 User: pubeu Bind query: yes
17 27m3s 549 1s 17s726ms 2s957ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 08 00 3 7s87ms 2s362ms 01 1 1s859ms 1s859ms 02 6 17s783ms 2s963ms 03 10 31s344ms 3s134ms 04 4 16s370ms 4s92ms 05 2 4s158ms 2s79ms 06 4 17s850ms 4s462ms 09 4 13s550ms 3s387ms 10 5 13s123ms 2s624ms 11 3 9s971ms 3s323ms 12 8 28s421ms 3s552ms 13 1 3s868ms 3s868ms 14 10 21s441ms 2s144ms 15 7 17s53ms 2s436ms 16 1 2s869ms 2s869ms 17 3 7s208ms 2s402ms 18 3 5s16ms 1s672ms 19 6 13s604ms 2s267ms 20 9 24s678ms 2s742ms 21 7 20s40ms 2s862ms 22 76 4m8s 3s270ms 23 39 1m39s 2s554ms Jun 09 00 1 1s736ms 1s736ms 06 5 12s133ms 2s426ms 07 5 7s596ms 1s519ms 08 1 1s14ms 1s14ms 09 4 6s571ms 1s642ms 10 1 3s312ms 3s312ms 11 3 3s636ms 1s212ms 12 10 17s748ms 1s774ms 13 11 16s349ms 1s486ms 14 3 10s123ms 3s374ms 15 1 1s328ms 1s328ms 16 6 13s82ms 2s180ms 17 7 13s551ms 1s935ms 18 10 17s868ms 1s786ms 19 1 1s22ms 1s22ms 21 6 21s659ms 3s609ms 22 5 12s121ms 2s424ms 23 9 10s33ms 1s114ms Jun 10 00 12 14s728ms 1s227ms 01 7 14s375ms 2s53ms 02 7 20s16ms 2s859ms 03 7 14s767ms 2s109ms 04 3 5s597ms 1s865ms 05 1 2s874ms 2s874ms 06 19 1m51s 5s859ms 07 1 1s52ms 1s52ms 08 1 1s25ms 1s25ms 09 1 1s5ms 1s5ms 10 1 1s23ms 1s23ms 11 2 2s721ms 1s360ms 12 1 1s459ms 1s459ms 13 4 9s715ms 2s428ms 15 1 2s805ms 2s805ms 16 4 12s672ms 3s168ms 17 3 16s965ms 5s655ms 18 1 1s181ms 1s181ms 19 3 8s936ms 2s978ms 20 1 1s63ms 1s63ms 22 1 1s50ms 1s50ms 23 2 13s229ms 6s614ms Jun 11 00 3 9s3ms 3s1ms 02 11 36s89ms 3s280ms 03 1 1s25ms 1s25ms 04 15 1m13s 4s908ms 08 1 1s153ms 1s153ms 09 2 2s101ms 1s50ms 10 5 19s141ms 3s828ms 11 4 16s793ms 4s198ms 12 43 2m37s 3s661ms 13 3 7s405ms 2s468ms 14 2 12s677ms 6s338ms 16 2 5s316ms 2s658ms 17 6 18s671ms 3s111ms 18 2 10s359ms 5s179ms 19 3 6s894ms 2s298ms 21 2 8s186ms 4s93ms 22 4 17s280ms 4s320ms 23 4 16s722ms 4s180ms Jun 12 03 2 9s427ms 4s713ms 04 1 6s802ms 6s802ms 05 3 4s405ms 1s468ms 06 2 12s569ms 6s284ms 09 2 2s823ms 1s411ms 10 2 2s70ms 1s35ms 11 2 8s575ms 4s287ms 13 1 2s853ms 2s853ms 15 1 1s29ms 1s29ms 17 2 2s541ms 1s270ms 18 1 2s375ms 2s375ms 19 1 6s449ms 6s449ms 20 3 6s671ms 2s223ms 21 13 35s238ms 2s710ms 22 2 3s424ms 1s712ms 23 2 5s537ms 2s768ms Jun 13 01 1 6s202ms 6s202ms 02 1 3s962ms 3s962ms 03 1 1s595ms 1s595ms Jun 14 20 1 2s324ms 2s324ms 21 4 9s767ms 2s441ms 23 4 11s271ms 2s817ms [ User: pubeu - Total duration: 9m42s - Times executed: 178 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '660706' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '660706') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:38:43 Duration: 17s726ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '743517' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '743517') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 11s579ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '924770' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '924770') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 9s738ms Database: ctdprd51 User: pubeu Bind query: yes
18 26m49s 387 1s 9s780ms 4s158ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 08 00 3 12s462ms 4s154ms 02 2 11s807ms 5s903ms 04 1 6s536ms 6s536ms 05 16 52s803ms 3s300ms 06 7 32s936ms 4s705ms 08 6 6s730ms 1s121ms 09 2 11s461ms 5s730ms 10 1 1s278ms 1s278ms 11 2 9s933ms 4s966ms 12 1 4s849ms 4s849ms 13 2 5s746ms 2s873ms 15 3 14s875ms 4s958ms 16 1 4s875ms 4s875ms 18 1 4s860ms 4s860ms 21 2 17s934ms 8s967ms 22 3 27s887ms 9s295ms 23 1 7s128ms 7s128ms Jun 09 05 7 11s750ms 1s678ms 06 1 1s80ms 1s80ms 07 2 7s53ms 3s526ms 09 2 7s54ms 3s527ms 10 3 3s135ms 1s45ms 12 1 1s40ms 1s40ms 13 1 5s484ms 5s484ms 14 1 5s461ms 5s461ms 15 6 25s156ms 4s192ms 16 2 10s554ms 5s277ms 17 8 32s370ms 4s46ms 19 2 11s635ms 5s817ms 21 3 3s114ms 1s38ms 22 5 14s997ms 2s999ms Jun 10 00 5 14s438ms 2s887ms 01 2 7s173ms 3s586ms 02 1 6s79ms 6s79ms 03 5 27s661ms 5s532ms 04 7 29s511ms 4s215ms 05 15 43s979ms 2s931ms 06 3 11s381ms 3s793ms 08 1 5s341ms 5s341ms 09 1 1s76ms 1s76ms 10 7 27s171ms 3s881ms 11 13 52s560ms 4s43ms 20 11 49s474ms 4s497ms 21 7 31s490ms 4s498ms 23 3 18s371ms 6s123ms Jun 11 01 2 2s188ms 1s94ms 02 2 7s127ms 3s563ms 03 10 38s279ms 3s827ms 04 15 1m15s 5s20ms 05 13 38s431ms 2s956ms 06 2 11s772ms 5s886ms 07 17 1m16s 4s510ms 12 1 6s24ms 6s24ms 13 1 5s969ms 5s969ms 14 1 5s870ms 5s870ms 15 6 21s499ms 3s583ms 16 5 14s881ms 2s976ms 17 12 51s896ms 4s324ms 18 2 11s868ms 5s934ms 19 1 1s89ms 1s89ms 20 1 5s836ms 5s836ms 21 1 6s53ms 6s53ms 22 4 14s248ms 3s562ms 23 2 12s901ms 6s450ms Jun 12 00 1 1s227ms 1s227ms 01 4 20s905ms 5s226ms 03 1 6s269ms 6s269ms 04 6 40s745ms 6s790ms 05 7 12s891ms 1s841ms 06 4 23s490ms 5s872ms 08 2 12s114ms 6s57ms 09 1 6s277ms 6s277ms 12 19 1m26s 4s578ms 13 1 1s81ms 1s81ms 14 23 1m36s 4s190ms 16 1 1s74ms 1s74ms 18 1 1s81ms 1s81ms 19 2 13s216ms 6s608ms 21 2 7s705ms 3s852ms 23 7 35s60ms 5s8ms Jun 13 00 8 36s411ms 4s551ms 01 8 35s837ms 4s479ms Jun 14 20 3 10s104ms 3s368ms 21 1 1s 1s 22 5 29s735ms 5s947ms 23 3 22s238ms 7s412ms [ User: pubeu - Total duration: 2m54s - Times executed: 37 ]
[ User: qaeu - Total duration: 5s778ms - Times executed: 5 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1299718' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 22:43:48 Duration: 9s780ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1414209' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 21:20:28 Duration: 9s621ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1326390' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 22:17:57 Duration: 9s445ms Database: ctdprd51 User: pubeu Bind query: yes
19 25m54s 20 1m16s 1m18s 1m17s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 08 06 1 1m17s 1m17s 10 1 1m17s 1m17s 14 1 1m16s 1m16s 18 1 1m17s 1m17s Jun 09 06 1 1m17s 1m17s 10 1 1m16s 1m16s 14 1 1m17s 1m17s 18 1 1m16s 1m16s Jun 10 06 1 1m17s 1m17s 10 1 1m17s 1m17s 14 1 1m17s 1m17s 18 1 1m17s 1m17s Jun 11 06 1 1m18s 1m18s 10 1 1m18s 1m18s 14 1 1m18s 1m18s 18 1 1m17s 1m17s Jun 12 06 1 1m18s 1m18s 10 1 1m18s 1m18s 14 1 1m18s 1m18s 18 1 1m18s 1m18s [ User: postgres - Total duration: 25m54s - Times executed: 20 ]
[ Application: pg_dump - Total duration: 25m54s - Times executed: 20 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2025-06-12 14:06:21 Duration: 1m18s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2025-06-11 10:06:20 Duration: 1m18s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2025-06-12 18:06:20 Duration: 1m18s Database: ctdprd51 User: postgres Application: pg_dump
20 23m59s 2 11m57s 12m1s 11m59s select gcr.ixn_id, null, gcr.gene_id, gcr.taxon_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gli.term_id gene_id from term_label gli where gli.object_type_id = ? and upper(gli.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?));Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 09 06 2 23m59s 11m59s [ User: pubeu - Total duration: 12m1s - Times executed: 1 ]
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, gcr.gene_id, gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE 'TTN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'SQUAMOUS CELL CARCINOMA OF HEAD AND NECK' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA05200' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7));
Date: 2025-06-09 06:06:51 Duration: 12m1s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, gcr.gene_id, gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE 'TTN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'SQUAMOUS CELL CARCINOMA OF HEAD AND NECK' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA05200' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7));
Date: 2025-06-09 06:23:10 Duration: 11m57s Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 293,798 5d2h20m30s 1s297ms 6s219ms 1s499ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 08 00 5,041 2h5m7s 1s489ms 01 5,250 2h9m35s 1s480ms 02 5,807 2h23m34s 1s483ms 03 5,655 2h20m32s 1s491ms 04 5,697 2h20m10s 1s476ms 05 5,469 2h13m7s 1s460ms 06 5,275 2h13m48s 1s521ms 07 5 8s446ms 1s689ms 08 712 17m58s 1s514ms 09 5,521 2h15m5s 1s468ms 10 2,902 1h9m24s 1s434ms 11 15 20s936ms 1s395ms 12 6 8s421ms 1s403ms 13 6 8s160ms 1s360ms 14 9 12s925ms 1s436ms 15 12 17s276ms 1s439ms 16 11 15s402ms 1s400ms 17 8 11s103ms 1s387ms 18 9 12s955ms 1s439ms 19 12 17s224ms 1s435ms 20 18 25s516ms 1s417ms 21 14 25s391ms 1s813ms 22 13 28s276ms 2s175ms 23 12 20s869ms 1s739ms Jun 09 00 3 4s710ms 1s570ms 05 2 2s805ms 1s402ms 06 1 1s384ms 1s384ms 07 1 1s474ms 1s474ms 08 8 11s646ms 1s455ms 09 11 16s23ms 1s456ms 10 23 34s513ms 1s500ms 11 112 2m43s 1s457ms 12 399 9m45s 1s466ms 13 413 10m3s 1s461ms 14 435 10m39s 1s471ms 15 566 13m44s 1s456ms 16 504 12m9s 1s448ms 17 585 14m10s 1s454ms 18 694 16m55s 1s463ms 19 763 18m33s 1s459ms 20 268 6m46s 1s515ms 21 223 6m7s 1s647ms 22 640 15m39s 1s468ms 23 554 13m29s 1s462ms Jun 10 00 360 8m40s 1s447ms 01 463 11m11s 1s449ms 02 490 11m59s 1s468ms 03 534 12m56s 1s453ms 04 623 15m5s 1s453ms 05 720 17m34s 1s465ms 06 811 19m34s 1s448ms 07 886 21m2s 1s424ms 08 1,092 25m58s 1s426ms 09 1,384 34m9s 1s481ms 10 1,485 36m36s 1s479ms 11 1,803 44m40s 1s486ms 12 1,804 44m18s 1s473ms 13 2,146 53m12s 1s487ms 14 2,491 1h1m38s 1s484ms 15 3,113 1h17m24s 1s491ms 16 2,369 59m50s 1s515ms 17 2,456 1h50s 1s486ms 18 3,030 1h15m17s 1s491ms 19 4,056 1h41m32s 1s502ms 20 3,620 1h30m42s 1s503ms 21 3,275 1h21m53s 1s500ms 22 4,299 1h47m59s 1s507ms 23 4,216 1h45m21s 1s499ms Jun 11 00 4,207 1h45m44s 1s508ms 01 4,212 1h45m 1s495ms 02 4,444 1h47m40s 1s453ms 03 2,164 52m21s 1s451ms 04 2,548 1h1m13s 1s441ms 05 2,534 1h1m25s 1s454ms 06 3,013 1h13m25s 1s462ms 07 3,328 1h22m37s 1s489ms 08 3,491 1h26m23s 1s484ms 09 4,449 1h49m26s 1s475ms 10 4,087 1h40m58s 1s482ms 11 3,340 1h22m43s 1s485ms 12 4,735 2h10m58s 1s659ms 13 4,752 1h57m50s 1s487ms 14 4,362 1h47m48s 1s482ms 15 3,690 1h30m43s 1s475ms 16 4,256 1h44m50s 1s478ms 17 4,463 1h51m52s 1s503ms 18 4,607 1h55m24s 1s503ms 19 4,746 1h57m2s 1s479ms 20 5,431 2h14m38s 1s487ms 21 5,725 2h23m12s 1s500ms 22 5,728 2h24m1s 1s508ms 23 4,822 2h3m20s 1s534ms Jun 12 00 3,417 1h29m9s 1s565ms 01 2,736 1h10m49s 1s553ms 02 3,288 1h25m34s 1s561ms 03 3,951 1h44m1s 1s579ms 04 3,506 1h31m34s 1s567ms 05 4,862 2h5m50s 1s553ms 06 2,348 57m52s 1s478ms 07 2,230 56m14s 1s513ms 08 3,723 1h32m20s 1s488ms 09 3,158 1h18m25s 1s490ms 10 3,288 1h21m26s 1s486ms 11 3,079 1h16m35s 1s492ms 12 3,345 1h23m29s 1s497ms 13 3,567 1h28m34s 1s489ms 14 5,539 2h20m16s 1s519ms 15 3,984 1h39m6s 1s492ms 16 3,392 1h24m21s 1s492ms 17 3,279 1h21m21s 1s488ms 18 3,118 1h18m24s 1s508ms 19 3,984 1h41m22s 1s526ms 20 4,622 1h57m45s 1s528ms 21 3,725 1h34m38s 1s524ms 22 3,344 1h25m39s 1s537ms 23 2,282 57m30s 1s512ms Jun 13 00 2,379 1h11s 1s518ms 01 3,505 1h28m58s 1s523ms 02 2,466 1h1m12s 1s489ms 03 1,335 33m3s 1s485ms Jun 14 20 1 2s111ms 2s111ms 23 1 1s564ms 1s564ms [ User: pubeu - Total duration: 11h42m58s - Times executed: 27382 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-06-10 06:15:21 Duration: 6s219ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-06-11 04:33:35 Duration: 5s307ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2025-06-09 21:50:13 Duration: 5s283ms Database: ctdprd51 User: pubeu Bind query: yes
2 10,321 3h52m38s 1s69ms 10s679ms 1s352ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where exposuremarkerterm.id = ? or receptorterm.id = ? group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 08 00 47 1m2s 1s333ms 01 39 51s924ms 1s331ms 02 26 34s252ms 1s317ms 03 53 1m11s 1s341ms 04 44 59s421ms 1s350ms 05 34 45s163ms 1s328ms 06 37 51s571ms 1s393ms 08 9 12s741ms 1s415ms 09 52 1m9s 1s337ms 10 24 30s645ms 1s276ms 11 51 1m4s 1s267ms 12 23 29s705ms 1s291ms 13 3 3s833ms 1s277ms 14 41 53s311ms 1s300ms 15 43 55s467ms 1s289ms 16 16 20s486ms 1s280ms 17 5 6s347ms 1s269ms 18 36 45s614ms 1s267ms 19 50 1m4s 1s293ms 20 14 18s474ms 1s319ms 21 13 21s66ms 1s620ms 22 47 2m44s 3s504ms 23 35 1m23s 2s383ms Jun 09 00 2 2s771ms 1s385ms 05 17 22s332ms 1s313ms 06 29 38s318ms 1s321ms 07 43 55s561ms 1s292ms 08 39 51s10ms 1s307ms 09 98 2m12s 1s351ms 10 61 1m21s 1s329ms 11 93 2m 1s299ms 12 104 2m15s 1s306ms 13 87 1m53s 1s303ms 14 77 1m40s 1s304ms 15 99 2m9s 1s305ms 16 85 1m49s 1s286ms 17 105 2m18s 1s315ms 18 110 2m23s 1s300ms 19 101 2m11s 1s300ms 20 37 49s484ms 1s337ms 21 21 38s215ms 1s819ms 22 62 1m22s 1s329ms 23 111 2m25s 1s312ms Jun 10 00 79 1m42s 1s303ms 01 68 1m28s 1s308ms 02 81 1m51s 1s378ms 03 114 2m27s 1s291ms 04 60 1m17s 1s293ms 05 74 1m37s 1s314ms 06 102 3m35s 2s112ms 07 69 1m27s 1s270ms 08 75 1m37s 1s296ms 09 96 2m5s 1s305ms 10 98 2m9s 1s325ms 11 85 1m53s 1s337ms 12 71 1m32s 1s307ms 13 87 1m56s 1s336ms 14 100 2m11s 1s313ms 15 79 1m43s 1s314ms 16 93 2m3s 1s329ms 17 113 2m27s 1s308ms 18 107 2m20s 1s314ms 19 79 1m44s 1s325ms 20 89 1m58s 1s330ms 21 100 2m12s 1s323ms 22 92 2m2s 1s328ms 23 83 1m50s 1s334ms Jun 11 00 81 1m49s 1s346ms 01 86 1m54s 1s326ms 02 71 1m36s 1s358ms 03 65 1m25s 1s321ms 04 76 1m46s 1s404ms 05 80 1m45s 1s312ms 06 91 1m59s 1s318ms 07 99 2m12s 1s335ms 08 94 2m3s 1s311ms 09 99 2m11s 1s333ms 10 94 2m5s 1s340ms 11 93 2m3s 1s322ms 12 95 2m42s 1s712ms 13 107 2m22s 1s332ms 14 58 1m16s 1s326ms 15 116 2m33s 1s320ms 16 85 1m53s 1s332ms 17 127 3m 1s419ms 18 124 2m50s 1s377ms 19 99 2m11s 1s331ms 20 115 2m33s 1s335ms 21 109 2m25s 1s337ms 22 121 2m43s 1s355ms 23 115 2m38s 1s375ms Jun 12 00 129 2m58s 1s386ms 01 117 2m41s 1s376ms 02 114 2m37s 1s380ms 03 99 2m18s 1s401ms 04 97 2m14s 1s386ms 05 160 3m40s 1s379ms 06 103 2m14s 1s307ms 07 104 2m18s 1s332ms 08 97 2m8s 1s320ms 09 106 2m21s 1s334ms 10 116 2m33s 1s320ms 11 158 3m29s 1s326ms 12 93 2m4s 1s341ms 13 97 2m8s 1s320ms 14 123 2m47s 1s361ms 15 168 3m42s 1s323ms 16 119 2m37s 1s322ms 17 104 2m17s 1s317ms 18 102 2m16s 1s333ms 19 125 2m49s 1s357ms 20 116 2m37s 1s358ms 21 164 3m51s 1s412ms 22 111 2m30s 1s355ms 23 97 2m9s 1s334ms Jun 13 00 133 2m57s 1s333ms 01 130 2m53s 1s337ms 02 104 2m16s 1s313ms 03 82 1m47s 1s316ms Jun 14 20 98 1m59s 1s217ms 21 120 2m22s 1s185ms 22 134 2m39s 1s194ms 23 184 3m43s 1s216ms [ User: pubeu - Total duration: 28m34s - Times executed: 1126 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '1458082' or receptorTerm.id = '1458082' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 06:15:25 Duration: 10s679ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2069743' or receptorTerm.id = '2069743' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 10s561ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = '2033215' or receptorTerm.id = '2033215' GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 06:15:23 Duration: 9s627ms Database: ctdprd51 User: pubeu Bind query: yes
3 8,922 3h59m53s 1s317ms 3s374ms 1s613ms select ;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 08 00 198 5m18s 1s607ms 01 200 5m18s 1s591ms 02 242 6m27s 1s602ms 03 196 5m8s 1s575ms 04 228 5m57s 1s567ms 05 170 4m26s 1s567ms 06 169 4m26s 1s577ms 08 16 25s308ms 1s581ms 09 176 4m32s 1s546ms 10 98 2m29s 1s524ms Jun 09 14 1 1s530ms 1s530ms 15 1 1s529ms 1s529ms 16 11 17s78ms 1s552ms 17 5 8s55ms 1s611ms 18 2 3s244ms 1s622ms 19 9 14s305ms 1s589ms 20 3 5s90ms 1s696ms 21 1 1s663ms 1s663ms 22 9 13s946ms 1s549ms 23 3 4s947ms 1s649ms Jun 10 00 3 4s927ms 1s642ms 02 1 1s827ms 1s827ms 03 1 1s636ms 1s636ms 04 3 4s897ms 1s632ms 05 4 6s408ms 1s602ms 06 12 18s960ms 1s580ms 07 10 15s707ms 1s570ms 08 12 18s652ms 1s554ms 09 22 34s773ms 1s580ms 10 20 32s213ms 1s610ms 11 27 43s681ms 1s617ms 12 54 1m27s 1s620ms 13 43 1m8s 1s600ms 14 69 1m51s 1s614ms 15 114 3m3s 1s610ms 16 54 1m27s 1s622ms 17 64 1m43s 1s623ms 18 96 2m35s 1s624ms 19 159 4m16s 1s610ms 20 123 3m17s 1s606ms 21 99 2m38s 1s598ms 22 133 3m37s 1s634ms 23 152 4m2s 1s595ms Jun 11 00 165 4m24s 1s600ms 01 133 3m33s 1s606ms 02 191 4m58s 1s561ms 03 50 1m17s 1s557ms 04 57 1m27s 1s531ms 05 60 1m34s 1s569ms 06 79 2m6s 1s595ms 07 91 2m27s 1s625ms 08 106 2m49s 1s600ms 09 142 3m46s 1s597ms 10 119 3m7s 1s575ms 11 84 2m13s 1s589ms 12 127 3m35s 1s693ms 13 169 4m33s 1s620ms 14 164 4m23s 1s607ms 15 108 2m53s 1s604ms 16 158 4m11s 1s594ms 17 171 4m35s 1s608ms 18 173 4m34s 1s587ms 19 176 4m41s 1s598ms 20 213 5m42s 1s609ms 21 241 6m26s 1s605ms 22 232 6m14s 1s614ms 23 154 4m13s 1s643ms Jun 12 00 103 2m55s 1s702ms 01 59 1m38s 1s667ms 02 95 2m39s 1s683ms 03 116 3m16s 1s689ms 04 99 2m46s 1s682ms 05 181 5m2s 1s669ms 06 54 1m29s 1s655ms 07 41 1m6s 1s631ms 08 121 3m17s 1s629ms 09 65 1m45s 1s628ms 10 72 1m57s 1s634ms 11 83 2m16s 1s641ms 12 111 3m4s 1s658ms 13 105 2m49s 1s616ms 14 183 4m55s 1s617ms 15 121 3m16s 1s625ms 16 95 2m35s 1s636ms 17 81 2m12s 1s641ms 18 80 2m11s 1s644ms 19 102 2m48s 1s652ms 20 147 4m2s 1s651ms 21 80 2m12s 1s659ms 22 83 2m18s 1s662ms 23 36 59s873ms 1s663ms Jun 13 00 45 1m15s 1s679ms 01 93 2m33s 1s651ms 02 63 1m42s 1s629ms 03 32 52s392ms 1s637ms [ User: pubeu - Total duration: 19m43s - Times executed: 726 ]
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-11 12:38:52 Duration: 3s374ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-11 17:10:38 Duration: 3s374ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-10 16:05:29 Duration: 3s232ms Database: ctdprd51 User: pubeu Bind query: yes
4 1,305 1h32m17s 1s4ms 27s377ms 4s242ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 08 00 19 1m27s 4s600ms 01 22 1m36s 4s407ms 02 22 1m38s 4s467ms 03 24 1m52s 4s671ms 04 21 1m33s 4s459ms 05 27 1m42s 3s806ms 06 23 1m27s 3s793ms 08 1 1s420ms 1s420ms 09 18 1m9s 3s878ms 10 9 36s242ms 4s26ms 11 2 9s190ms 4s595ms 13 1 1s183ms 1s183ms 14 1 1s28ms 1s28ms 15 1 1s70ms 1s70ms 16 1 7s312ms 7s312ms 17 1 9s116ms 9s116ms 18 1 1s464ms 1s464ms 19 1 13s892ms 13s892ms 20 1 4s926ms 4s926ms 21 2 2s119ms 1s59ms 22 4 29s453ms 7s363ms 23 5 13s571ms 2s714ms Jun 09 00 1 1s707ms 1s707ms 05 1 11s26ms 11s26ms 06 4 19s761ms 4s940ms 07 2 8s831ms 4s415ms 08 4 18s49ms 4s512ms 10 1 2s214ms 2s214ms 11 2 16s964ms 8s482ms 12 3 7s873ms 2s624ms 13 5 36s735ms 7s347ms 14 3 9s404ms 3s134ms 15 3 6s445ms 2s148ms 16 3 6s67ms 2s22ms 17 3 6s280ms 2s93ms 18 2 6s819ms 3s409ms 19 4 20s972ms 5s243ms 20 5 10s479ms 2s95ms 21 2 3s740ms 1s870ms 22 3 6s229ms 2s76ms 23 2 6s792ms 3s396ms Jun 10 00 5 34s479ms 6s895ms 01 2 9s708ms 4s854ms 02 11 58s851ms 5s350ms 03 2 15s270ms 7s635ms 04 3 16s3ms 5s334ms 05 7 28s53ms 4s7ms 06 1 1s413ms 1s413ms 07 2 4s434ms 2s217ms 08 4 14s235ms 3s558ms 09 5 23s741ms 4s748ms 10 5 21s558ms 4s311ms 11 7 31s785ms 4s540ms 12 5 15s771ms 3s154ms 13 7 30s995ms 4s427ms 14 7 39s187ms 5s598ms 15 9 38s56ms 4s228ms 16 10 35s186ms 3s518ms 17 11 32s286ms 2s935ms 18 5 34s624ms 6s924ms 19 18 1m25s 4s729ms 20 17 56s896ms 3s346ms 21 13 45s963ms 3s535ms 22 15 59s385ms 3s959ms 23 12 49s710ms 4s142ms Jun 11 00 11 48s504ms 4s409ms 01 15 59s204ms 3s946ms 02 10 51s90ms 5s109ms 03 11 38s578ms 3s507ms 04 4 29s599ms 7s399ms 05 9 33s508ms 3s723ms 06 8 31s153ms 3s894ms 07 23 1m33s 4s77ms 08 16 1m12s 4s536ms 09 14 49s901ms 3s564ms 10 29 2m3s 4s257ms 11 32 1m40s 3s133ms 12 140 14m16s 6s119ms 13 12 32s589ms 2s715ms 14 17 1m11s 4s211ms 15 7 34s646ms 4s949ms 16 17 59s538ms 3s502ms 17 21 1m7s 3s216ms 18 17 1m22s 4s845ms 19 18 1m2s 3s464ms 20 17 1m7s 3s972ms 21 24 1m56s 4s842ms 22 28 1m38s 3s535ms 23 17 1m9s 4s91ms Jun 12 00 15 50s672ms 3s378ms 01 16 59s413ms 3s713ms 02 14 1m3s 4s506ms 03 18 55s264ms 3s70ms 04 13 49s447ms 3s803ms 05 18 1m14s 4s113ms 06 4 23s895ms 5s973ms 07 7 21s205ms 3s29ms 08 15 44s639ms 2s975ms 09 15 53s559ms 3s570ms 10 19 1m 3s183ms 11 13 53s838ms 4s141ms 12 10 44s689ms 4s468ms 13 18 1m8s 3s819ms 14 20 1m44s 5s232ms 15 11 58s249ms 5s295ms 16 11 33s211ms 3s19ms 17 7 28s82ms 4s11ms 18 12 1m2s 5s173ms 19 6 18s804ms 3s134ms 20 15 46s395ms 3s93ms 21 10 22s800ms 2s280ms 22 4 15s583ms 3s895ms 23 9 26s873ms 2s985ms Jun 13 00 7 22s113ms 3s159ms 01 8 46s338ms 5s792ms 02 9 41s472ms 4s608ms 03 4 10s740ms 2s685ms Jun 14 20 1 6s835ms 6s835ms 21 5 20s132ms 4s26ms 22 3 9s977ms 3s325ms 23 8 19s63ms 2s382ms [ User: pubeu - Total duration: 12m54s - Times executed: 155 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100109') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:39:43 Duration: 27s377ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2106936') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:38:50 Duration: 27s53ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2094859') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:35:27 Duration: 24s784ms Database: ctdprd51 User: pubeu Bind query: yes
5 1,215 1h1m9s 1s 17s652ms 3s20ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 08 00 15 48s119ms 3s207ms 01 8 16s334ms 2s41ms 02 18 59s153ms 3s286ms 03 16 38s789ms 2s424ms 04 17 58s257ms 3s426ms 05 35 1m36s 2s751ms 06 22 1m7s 3s68ms 08 1 1s44ms 1s44ms 09 5 10s761ms 2s152ms 10 12 37s301ms 3s108ms 11 10 38s105ms 3s810ms 12 9 30s749ms 3s416ms 13 9 37s357ms 4s150ms 14 15 57s936ms 3s862ms 15 7 20s685ms 2s955ms 16 9 27s774ms 3s86ms 17 4 12s800ms 3s200ms 18 6 17s289ms 2s881ms 19 10 26s200ms 2s620ms 20 9 32s103ms 3s567ms 21 15 54s757ms 3s650ms 22 7 29s543ms 4s220ms 23 5 14s273ms 2s854ms Jun 09 00 1 2s336ms 2s336ms 06 5 14s391ms 2s878ms 07 7 23s267ms 3s323ms 08 5 12s682ms 2s536ms 09 2 4s315ms 2s157ms 10 4 7s932ms 1s983ms 11 7 24s585ms 3s512ms 12 5 21s585ms 4s317ms 13 11 34s127ms 3s102ms 14 12 45s259ms 3s771ms 15 22 1m9s 3s144ms 16 9 33s33ms 3s670ms 17 23 1m22s 3s566ms 18 8 23s245ms 2s905ms 19 15 38s50ms 2s536ms 20 4 9s454ms 2s363ms 22 1 2s268ms 2s268ms 23 6 26s322ms 4s387ms Jun 10 00 7 24s684ms 3s526ms 01 12 39s540ms 3s295ms 02 11 45s590ms 4s144ms 03 5 11s84ms 2s216ms 04 14 36s338ms 2s595ms 05 22 1m2s 2s828ms 06 3 5s401ms 1s800ms 07 2 2s928ms 1s464ms 09 1 6s779ms 6s779ms 10 11 32s652ms 2s968ms 11 22 1m 2s735ms 12 3 4s819ms 1s606ms 13 1 1s525ms 1s525ms 15 3 9s913ms 3s304ms 16 2 2s836ms 1s418ms 17 3 6s831ms 2s277ms 18 1 3s439ms 3s439ms 19 6 17s372ms 2s895ms 20 21 56s270ms 2s679ms 21 15 37s60ms 2s470ms 22 3 5s981ms 1s993ms 23 1 1s23ms 1s23ms Jun 11 00 4 10s326ms 2s581ms 01 5 20s792ms 4s158ms 02 9 19s301ms 2s144ms 03 17 46s810ms 2s753ms 04 18 45s512ms 2s528ms 05 16 36s674ms 2s292ms 06 2 9s261ms 4s630ms 07 34 1m29s 2s642ms 08 5 24s817ms 4s963ms 09 8 17s283ms 2s160ms 10 5 20s700ms 4s140ms 11 8 21s983ms 2s747ms 12 50 2m19s 2s796ms 13 11 33s142ms 3s12ms 14 9 32s495ms 3s610ms 15 14 50s78ms 3s577ms 16 16 39s495ms 2s468ms 17 31 1m23s 2s685ms 18 7 26s749ms 3s821ms 19 2 4s689ms 2s344ms 20 8 19s10ms 2s376ms 21 10 47s480ms 4s748ms 22 6 12s910ms 2s151ms 23 5 19s538ms 3s907ms Jun 12 00 11 32s896ms 2s990ms 01 4 12s915ms 3s228ms 02 7 14s820ms 2s117ms 03 9 31s822ms 3s535ms 04 5 10s299ms 2s59ms 05 11 32s233ms 2s930ms 06 4 10s343ms 2s585ms 07 7 18s977ms 2s711ms 08 7 23s594ms 3s370ms 09 7 18s785ms 2s683ms 10 11 31s670ms 2s879ms 11 10 45s26ms 4s502ms 12 35 1m35s 2s720ms 13 8 25s360ms 3s170ms 14 42 2m1s 2s881ms 15 8 29s253ms 3s656ms 16 3 9s577ms 3s192ms 17 6 14s500ms 2s416ms 18 4 14s119ms 3s529ms 19 7 30s614ms 4s373ms 20 6 20s307ms 3s384ms 21 13 51s367ms 3s951ms 22 7 19s452ms 2s778ms 23 19 56s355ms 2s966ms Jun 13 00 22 53s907ms 2s450ms 01 18 56s188ms 3s121ms 02 4 12s136ms 3s34ms 03 3 7s 2s333ms Jun 14 20 9 42s384ms 4s709ms 21 11 33s59ms 3s5ms 22 9 21s218ms 2s357ms 23 8 19s585ms 2s448ms [ User: pubeu - Total duration: 9m1s - Times executed: 169 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1279518'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-14 20:13:02 Duration: 17s652ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1451245'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:38:33 Duration: 11s321ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:35:07 Duration: 10s937ms Bind query: yes
6 1,201 31m51s 1s479ms 4s545ms 1s591ms select coalesce(d.abbr_display, d.nm_display) nm # ?, d.description # ?, coalesce(d.abbr, d.nm) anchor # ?, get_homepage_url (d.id) url # ? from db d # ? where d.id in (# ? select l.db_id # ? from db_link l # ? where l.type_cd = ? # ? and l.object_type_id = ?) # ? order by ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 08 00 28 44s379ms 1s584ms 01 25 39s231ms 1s569ms 02 37 58s549ms 1s582ms 03 57 1m30s 1s588ms 04 47 1m15s 1s606ms 05 48 1m16s 1s590ms 06 53 1m25s 1s604ms 07 1 1s777ms 1s777ms 08 9 14s421ms 1s602ms 09 57 1m30s 1s595ms 10 57 1m29s 1s565ms 11 4 6s137ms 1s534ms 12 1 1s528ms 1s528ms 13 4 6s156ms 1s539ms 14 4 6s302ms 1s575ms 15 4 6s185ms 1s546ms 16 7 10s740ms 1s534ms 17 4 6s247ms 1s561ms 18 1 1s524ms 1s524ms 19 6 9s238ms 1s539ms 20 5 7s682ms 1s536ms 21 4 7s323ms 1s830ms 22 4 10s726ms 2s681ms 23 5 8s572ms 1s714ms Jun 09 00 21 32s484ms 1s546ms 05 2 3s112ms 1s556ms 06 3 4s690ms 1s563ms 07 4 6s240ms 1s560ms 08 2 3s81ms 1s540ms 10 3 4s677ms 1s559ms 11 2 3s73ms 1s536ms 12 4 6s220ms 1s555ms 13 3 4s670ms 1s556ms 14 6 9s290ms 1s548ms 15 7 11s13ms 1s573ms 16 4 6s272ms 1s568ms 17 3 4s707ms 1s569ms 18 3 4s670ms 1s556ms 19 6 9s377ms 1s562ms 20 1 1s611ms 1s611ms 21 1 1s580ms 1s580ms 22 1 1s541ms 1s541ms 23 1 1s565ms 1s565ms Jun 10 00 1 1s620ms 1s620ms 02 3 4s666ms 1s555ms 03 4 6s269ms 1s567ms 04 1 1s585ms 1s585ms 05 3 4s706ms 1s568ms 06 1 1s539ms 1s539ms 07 2 3s56ms 1s528ms 10 2 3s181ms 1s590ms 11 1 1s528ms 1s528ms 12 5 7s823ms 1s564ms 14 1 1s553ms 1s553ms 15 2 3s355ms 1s677ms 16 11 18s712ms 1s701ms 17 18 28s112ms 1s561ms 18 7 10s859ms 1s551ms 19 11 17s189ms 1s562ms 20 4 6s267ms 1s566ms 21 1 1s557ms 1s557ms 22 3 4s704ms 1s568ms 23 1 1s522ms 1s522ms Jun 11 00 12 19s133ms 1s594ms 01 2 3s129ms 1s564ms 02 9 14s81ms 1s564ms 03 5 7s699ms 1s539ms 04 3 4s606ms 1s535ms 05 4 6s247ms 1s561ms 06 6 9s274ms 1s545ms 07 6 9s311ms 1s551ms 08 8 12s518ms 1s564ms 09 15 23s595ms 1s573ms 10 15 23s370ms 1s558ms 11 15 23s762ms 1s584ms 12 10 19s835ms 1s983ms 13 4 6s299ms 1s574ms 14 11 17s390ms 1s580ms 15 13 20s490ms 1s576ms 16 12 18s716ms 1s559ms 17 16 25s376ms 1s586ms 18 12 18s990ms 1s582ms 19 8 12s599ms 1s574ms 20 9 14s474ms 1s608ms 21 11 17s458ms 1s587ms 22 10 17s821ms 1s782ms 23 6 9s489ms 1s581ms Jun 12 00 7 11s259ms 1s608ms 01 2 3s305ms 1s652ms 02 4 6s521ms 1s630ms 03 3 4s814ms 1s604ms 04 4 6s377ms 1s594ms 05 16 25s245ms 1s577ms 06 5 7s923ms 1s584ms 07 12 19s450ms 1s620ms 08 20 31s592ms 1s579ms 09 12 18s833ms 1s569ms 10 5 7s905ms 1s581ms 11 16 25s41ms 1s565ms 12 28 44s393ms 1s585ms 13 10 15s709ms 1s570ms 14 16 25s662ms 1s603ms 15 14 22s40ms 1s574ms 16 22 34s864ms 1s584ms 17 9 14s88ms 1s565ms 18 11 17s335ms 1s575ms 19 17 27s121ms 1s595ms 20 4 6s477ms 1s619ms 21 13 20s379ms 1s567ms 22 29 46s235ms 1s594ms 23 10 15s544ms 1s554ms Jun 13 00 18 28s523ms 1s584ms 01 6 9s464ms 1s577ms 02 15 23s479ms 1s565ms 03 7 11s56ms 1s579ms Jun 14 20 5 8s366ms 1s673ms 21 3 4s763ms 1s587ms 22 2 3s194ms 1s597ms 23 3 4s725ms 1s575ms [ User: pubeu - Total duration: 3m28s - Times executed: 123 ]
[ User: qaeu - Total duration: 7s938ms - Times executed: 5 ]
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-06-11 12:38:37 Duration: 4s545ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-06-11 22:53:02 Duration: 3s343ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT COALESCE(d.abbr_display, d.nm_display) nm # 015, d.description # 015, COALESCE(d.abbr, d.nm) anchor # 015, get_homepage_url (d.id) url # 015 FROM db d # 015 WHERE d.id IN (# 015 SELECT l.db_id # 015 FROM db_link l # 015 WHERE l.type_cd = 'X' # 015 AND l.object_type_id = 4) # 015 ORDER BY 1;
Date: 2025-06-08 22:24:38 Duration: 3s98ms Database: ctdprd51 User: pubeu Bind query: yes
7 1,168 47m58s 1s 20s534ms 2s464ms select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 08 00 17 39s498ms 2s323ms 01 10 21s258ms 2s125ms 02 10 34s170ms 3s417ms 03 11 30s956ms 2s814ms 04 10 21s843ms 2s184ms 05 33 1m15s 2s286ms 06 30 1m12s 2s418ms 08 2 5s668ms 2s834ms 09 6 12s159ms 2s26ms 10 12 26s648ms 2s220ms 11 11 25s145ms 2s285ms 12 11 22s847ms 2s77ms 13 10 23s326ms 2s332ms 14 7 15s198ms 2s171ms 15 13 34s529ms 2s656ms 16 8 24s43ms 3s5ms 17 3 10s708ms 3s569ms 18 5 13s576ms 2s715ms 19 6 15s756ms 2s626ms 20 11 28s217ms 2s565ms 21 13 37s257ms 2s865ms 22 10 1m2s 6s291ms 23 8 21s665ms 2s708ms Jun 09 00 1 2s148ms 2s148ms 06 1 4s565ms 4s565ms 07 6 16s767ms 2s794ms 08 7 16s836ms 2s405ms 09 4 15s386ms 3s846ms 10 3 6s500ms 2s166ms 11 4 9s971ms 2s492ms 12 6 15s85ms 2s514ms 13 12 18s484ms 1s540ms 14 8 14s523ms 1s815ms 15 19 42s727ms 2s248ms 16 8 24s296ms 3s37ms 17 28 1m12s 2s606ms 18 6 16s67ms 2s677ms 19 14 43s147ms 3s81ms 20 4 7s947ms 1s986ms 22 2 2s291ms 1s145ms 23 8 22s498ms 2s812ms Jun 10 00 10 25s13ms 2s501ms 01 8 23s591ms 2s948ms 02 7 17s623ms 2s517ms 03 5 10s346ms 2s69ms 04 14 31s753ms 2s268ms 05 19 47s324ms 2s490ms 06 3 3s505ms 1s168ms 07 2 5s246ms 2s623ms 09 2 4s192ms 2s96ms 10 10 22s256ms 2s225ms 11 21 47s725ms 2s272ms 13 2 5s918ms 2s959ms 14 4 11s921ms 2s980ms 15 6 13s628ms 2s271ms 16 3 8s965ms 2s988ms 17 2 8s741ms 4s370ms 18 1 3s164ms 3s164ms 19 5 14s670ms 2s934ms 20 22 57s976ms 2s635ms 21 15 30s873ms 2s58ms 22 1 1s134ms 1s134ms 23 7 9s458ms 1s351ms Jun 11 00 3 10s112ms 3s370ms 01 3 9s100ms 3s33ms 02 5 15s710ms 3s142ms 03 15 35s350ms 2s356ms 04 24 53s65ms 2s211ms 05 14 32s987ms 2s356ms 06 7 15s30ms 2s147ms 07 33 1m9s 2s106ms 08 6 9s575ms 1s595ms 09 11 22s789ms 2s71ms 10 8 19s863ms 2s482ms 11 12 24s465ms 2s38ms 12 50 2m20s 2s806ms 13 10 22s146ms 2s214ms 14 6 15s74ms 2s512ms 15 9 19s554ms 2s172ms 16 13 32s24ms 2s463ms 17 31 1m11s 2s311ms 18 7 16s248ms 2s321ms 19 16 40s9ms 2s500ms 20 9 17s75ms 1s897ms 21 12 26s665ms 2s222ms 22 9 19s811ms 2s201ms 23 5 5s912ms 1s182ms Jun 12 00 5 15s751ms 3s150ms 01 10 24s51ms 2s405ms 02 5 16s116ms 3s223ms 03 6 18s652ms 3s108ms 04 7 13s412ms 1s916ms 05 6 16s324ms 2s720ms 06 9 19s449ms 2s161ms 07 5 11s407ms 2s281ms 08 3 5s466ms 1s822ms 09 8 15s757ms 1s969ms 10 6 11s405ms 1s900ms 11 10 23s918ms 2s391ms 12 31 1m13s 2s356ms 13 3 9s787ms 3s262ms 14 41 1m33s 2s274ms 15 3 7s23ms 2s341ms 16 5 17s330ms 3s466ms 17 5 12s776ms 2s555ms 18 4 15s408ms 3s852ms 19 6 11s296ms 1s882ms 20 7 17s867ms 2s552ms 21 7 18s485ms 2s640ms 22 4 9s734ms 2s433ms 23 13 36s207ms 2s785ms Jun 13 00 20 53s734ms 2s686ms 01 15 32s926ms 2s195ms 02 5 11s907ms 2s381ms 03 2 8s703ms 4s351ms Jun 14 20 1 4s472ms 4s472ms 21 11 34s200ms 3s109ms 22 10 20s23ms 2s2ms 23 10 21s923ms 2s192ms [ User: pubeu - Total duration: 6m30s - Times executed: 149 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-11 12:38:47 Duration: 20s534ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-08 22:25:40 Duration: 15s105ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1449732') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1449732') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-08 22:33:43 Duration: 11s277ms Bind query: yes
8 1,152 28m35s 1s192ms 5s303ms 1s488ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 08 00 7 10s248ms 1s464ms 01 1 1s400ms 1s400ms 03 8 11s891ms 1s486ms 04 5 7s453ms 1s490ms 05 5 7s452ms 1s490ms 06 9 13s882ms 1s542ms 08 4 6s179ms 1s544ms 09 8 12s128ms 1s516ms 10 3 4s491ms 1s497ms 11 3 4s211ms 1s403ms 12 1 1s461ms 1s461ms 13 3 4s282ms 1s427ms 14 2 2s936ms 1s468ms 15 3 4s308ms 1s436ms 16 3 4s284ms 1s428ms 17 1 1s702ms 1s702ms 18 1 1s487ms 1s487ms 19 7 9s938ms 1s419ms 20 1 1s420ms 1s420ms 21 3 4s705ms 1s568ms 22 6 23s638ms 3s939ms 23 4 8s182ms 2s45ms Jun 09 05 5 7s355ms 1s471ms 06 4 6s49ms 1s512ms 07 3 4s262ms 1s420ms 08 4 5s812ms 1s453ms 09 7 9s754ms 1s393ms 10 8 12s56ms 1s507ms 11 8 11s521ms 1s440ms 12 13 18s946ms 1s457ms 13 15 21s877ms 1s458ms 14 6 8s710ms 1s451ms 15 15 21s400ms 1s426ms 16 8 11s432ms 1s429ms 17 12 18s74ms 1s506ms 18 8 11s828ms 1s478ms 19 17 24s326ms 1s430ms 20 4 6s110ms 1s527ms 21 4 12s664ms 3s166ms 22 12 17s907ms 1s492ms 23 21 31s128ms 1s482ms Jun 10 00 7 10s265ms 1s466ms 01 6 9s64ms 1s510ms 02 18 26s783ms 1s487ms 03 11 15s802ms 1s436ms 04 9 12s805ms 1s422ms 05 16 23s317ms 1s457ms 06 19 26s828ms 1s412ms 07 9 12s751ms 1s416ms 08 10 13s998ms 1s399ms 09 11 15s971ms 1s451ms 10 11 15s936ms 1s448ms 11 14 20s383ms 1s455ms 12 12 17s139ms 1s428ms 13 14 20s505ms 1s464ms 14 19 28s56ms 1s476ms 15 10 14s567ms 1s456ms 16 13 19s89ms 1s468ms 17 11 16s254ms 1s477ms 18 13 19s66ms 1s466ms 19 4 5s973ms 1s493ms 20 9 13s261ms 1s473ms 21 12 17s557ms 1s463ms 22 15 22s47ms 1s469ms 23 5 7s342ms 1s468ms Jun 11 00 12 17s525ms 1s460ms 01 15 22s205ms 1s480ms 02 8 11s446ms 1s430ms 03 5 7s492ms 1s498ms 04 7 10s143ms 1s449ms 05 15 22s475ms 1s498ms 06 7 10s832ms 1s547ms 07 10 14s992ms 1s499ms 08 8 11s635ms 1s454ms 09 7 10s518ms 1s502ms 10 10 15s71ms 1s507ms 11 14 20s630ms 1s473ms 12 13 21s468ms 1s651ms 13 6 8s771ms 1s461ms 15 15 22s167ms 1s477ms 16 14 21s80ms 1s505ms 17 9 13s264ms 1s473ms 18 8 12s449ms 1s556ms 19 9 13s405ms 1s489ms 20 8 11s901ms 1s487ms 21 17 25s372ms 1s492ms 22 13 19s299ms 1s484ms 23 7 10s849ms 1s549ms Jun 12 00 8 12s229ms 1s528ms 01 9 14s138ms 1s570ms 02 14 21s300ms 1s521ms 03 7 10s960ms 1s565ms 04 8 11s816ms 1s477ms 05 11 17s427ms 1s584ms 06 4 5s896ms 1s474ms 07 9 13s372ms 1s485ms 08 7 10s88ms 1s441ms 09 13 18s974ms 1s459ms 10 10 14s589ms 1s458ms 11 10 14s773ms 1s477ms 12 16 23s277ms 1s454ms 13 6 8s875ms 1s479ms 14 11 16s546ms 1s504ms 15 12 17s548ms 1s462ms 16 10 14s810ms 1s481ms 17 6 8s730ms 1s455ms 18 7 10s226ms 1s460ms 19 8 11s830ms 1s478ms 20 12 18s91ms 1s507ms 21 11 16s886ms 1s535ms 22 19 29s90ms 1s531ms 23 10 15s39ms 1s503ms Jun 13 00 11 16s518ms 1s501ms 01 18 26s693ms 1s482ms 02 11 16s113ms 1s464ms 03 2 2s970ms 1s485ms Jun 14 20 12 16s26ms 1s335ms 21 18 23s661ms 1s314ms 22 25 33s615ms 1s344ms 23 40 54s286ms 1s357ms [ User: pubeu - Total duration: 3m35s - Times executed: 132 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1245710') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1245710') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 22:33:12 Duration: 5s303ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1256281') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1256281') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 22:31:51 Duration: 4s949ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.phenotype_id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232011') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1232011') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-09 21:50:13 Duration: 4s905ms Database: ctdprd51 User: pubeu Bind query: yes
9 761 1h21s 4s148ms 20s233ms 4s759ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 08 01 1 4s865ms 4s865ms 02 23 1m47s 4s679ms 03 23 1m51s 4s842ms 04 13 1m 4s666ms 09 2 10s54ms 5s27ms 10 11 50s612ms 4s601ms 13 1 4s389ms 4s389ms 15 2 8s934ms 4s467ms 21 1 12s87ms 12s87ms 22 1 16s31ms 16s31ms 23 2 15s996ms 7s998ms Jun 09 05 3 13s223ms 4s407ms 06 1 4s713ms 4s713ms 07 5 24s133ms 4s826ms 08 1 4s316ms 4s316ms 09 3 13s820ms 4s606ms 10 2 9s220ms 4s610ms 12 1 4s490ms 4s490ms 14 1 4s454ms 4s454ms 15 2 8s958ms 4s479ms 21 1 4s947ms 4s947ms 22 1 4s509ms 4s509ms 23 4 18s286ms 4s571ms Jun 10 01 3 30s409ms 10s136ms 02 2 8s834ms 4s417ms 03 2 8s443ms 4s221ms 04 2 8s618ms 4s309ms 05 2 8s898ms 4s449ms 06 3 13s293ms 4s431ms 07 2 11s374ms 5s687ms 08 3 13s501ms 4s500ms 09 3 13s809ms 4s603ms 10 6 27s115ms 4s519ms 11 25 1m54s 4s566ms 12 16 1m13s 4s624ms 13 9 40s969ms 4s552ms 14 34 2m34s 4s535ms 15 27 2m2s 4s543ms 16 7 35s920ms 5s131ms 17 1 4s683ms 4s683ms 22 1 4s413ms 4s413ms Jun 11 00 5 24s156ms 4s831ms 01 9 41s124ms 4s569ms 02 10 45s294ms 4s529ms 03 6 26s503ms 4s417ms 04 10 1m15s 7s561ms 05 25 1m52s 4s486ms 06 11 50s101ms 4s554ms 07 7 32s672ms 4s667ms 08 3 13s613ms 4s537ms 09 1 4s411ms 4s411ms 10 1 4s858ms 4s858ms 12 4 19s343ms 4s835ms 13 1 4s706ms 4s706ms 14 12 54s321ms 4s526ms 15 7 32s955ms 4s707ms 16 4 18s733ms 4s683ms 18 1 4s608ms 4s608ms 19 2 9s21ms 4s510ms 20 1 4s922ms 4s922ms 23 1 4s823ms 4s823ms Jun 12 01 3 14s560ms 4s853ms 02 51 4m3s 4s783ms 03 79 6m21s 4s833ms 04 5 23s806ms 4s761ms 05 1 5s155ms 5s155ms 06 2 8s971ms 4s485ms 07 44 3m27s 4s716ms 08 49 3m42s 4s534ms 09 55 4m13s 4s613ms 10 19 1m26s 4s546ms 11 5 22s988ms 4s597ms 12 16 1m20s 5s35ms 13 15 1m8s 4s555ms 14 15 1m13s 4s898ms 15 7 32s78ms 4s582ms 16 1 4s558ms 4s558ms 20 1 5s386ms 5s386ms 21 1 5s933ms 5s933ms 22 2 9s34ms 4s517ms 23 2 9s73ms 4s536ms Jun 13 00 3 13s981ms 4s660ms 01 2 9s164ms 4s582ms 02 3 13s681ms 4s560ms 03 1 4s419ms 4s419ms Jun 14 20 1 4s148ms 4s148ms 21 1 4s765ms 4s765ms 23 3 15s53ms 5s17ms [ User: pubeu - Total duration: 6m29s - Times executed: 76 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-11 04:10:46 Duration: 20s233ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-10 01:46:26 Duration: 19s276ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-11 04:10:53 Duration: 19s170ms Bind query: yes
10 592 14m44s 1s212ms 5s536ms 1s493ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or receptorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by chemnmsort limit ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 08 00 3 4s348ms 1s449ms 01 2 2s954ms 1s477ms 02 2 3s147ms 1s573ms 03 5 7s537ms 1s507ms 04 1 1s587ms 1s587ms 05 5 7s680ms 1s536ms 06 3 4s627ms 1s542ms 08 2 3s216ms 1s608ms 10 4 5s845ms 1s461ms 11 3 4s264ms 1s421ms 12 1 1s354ms 1s354ms 13 1 1s640ms 1s640ms 14 5 7s349ms 1s469ms 15 3 4s209ms 1s403ms 16 1 1s364ms 1s364ms 19 2 2s705ms 1s352ms 20 2 2s857ms 1s428ms 21 4 8s197ms 2s49ms 22 2 7s569ms 3s784ms 23 5 11s521ms 2s304ms Jun 09 05 5 7s461ms 1s492ms 06 3 4s419ms 1s473ms 07 2 2s834ms 1s417ms 08 4 5s851ms 1s462ms 09 1 1s396ms 1s396ms 10 3 4s610ms 1s536ms 11 3 4s318ms 1s439ms 12 8 11s587ms 1s448ms 13 5 7s226ms 1s445ms 14 7 10s75ms 1s439ms 15 5 7s180ms 1s436ms 16 5 7s126ms 1s425ms 17 6 8s754ms 1s459ms 18 6 8s836ms 1s472ms 19 10 14s644ms 1s464ms 20 3 4s505ms 1s501ms 21 2 3s1ms 1s500ms 22 3 4s482ms 1s494ms 23 7 10s132ms 1s447ms Jun 10 00 2 2s887ms 1s443ms 01 4 5s679ms 1s419ms 02 10 14s898ms 1s489ms 03 5 7s777ms 1s555ms 04 5 7s176ms 1s435ms 05 7 10s320ms 1s474ms 06 1 1s366ms 1s366ms 07 6 8s469ms 1s411ms 08 2 2s835ms 1s417ms 09 5 7s267ms 1s453ms 10 7 10s245ms 1s463ms 11 6 8s737ms 1s456ms 12 7 10s410ms 1s487ms 13 10 14s545ms 1s454ms 14 9 12s915ms 1s435ms 15 7 10s482ms 1s497ms 16 4 5s827ms 1s456ms 17 3 4s374ms 1s458ms 18 8 11s749ms 1s468ms 19 4 6s23ms 1s505ms 20 5 7s437ms 1s487ms 21 6 8s862ms 1s477ms 22 2 3s26ms 1s513ms 23 5 7s331ms 1s466ms Jun 11 00 4 5s763ms 1s440ms 01 3 4s473ms 1s491ms 02 3 4s346ms 1s448ms 03 3 5s24ms 1s674ms 04 1 1s501ms 1s501ms 05 6 9s160ms 1s526ms 06 11 16s155ms 1s468ms 07 6 8s796ms 1s466ms 08 6 8s639ms 1s439ms 09 3 4s680ms 1s560ms 10 6 8s936ms 1s489ms 11 4 5s888ms 1s472ms 12 6 9s634ms 1s605ms 13 4 5s961ms 1s490ms 14 3 4s369ms 1s456ms 15 5 7s210ms 1s442ms 16 8 11s931ms 1s491ms 17 3 4s396ms 1s465ms 18 3 4s561ms 1s520ms 19 4 5s951ms 1s487ms 20 5 7s778ms 1s555ms 21 6 8s952ms 1s492ms 22 7 11s601ms 1s657ms 23 5 7s581ms 1s516ms Jun 12 00 5 7s688ms 1s537ms 01 5 7s772ms 1s554ms 02 8 12s262ms 1s532ms 03 3 4s742ms 1s580ms 04 7 12s169ms 1s738ms 05 14 21s488ms 1s534ms 06 5 7s279ms 1s455ms 07 2 3s159ms 1s579ms 08 6 8s926ms 1s487ms 09 4 5s896ms 1s474ms 10 7 10s268ms 1s466ms 11 4 5s752ms 1s438ms 12 4 5s869ms 1s467ms 13 2 2s935ms 1s467ms 14 8 12s496ms 1s562ms 15 3 4s327ms 1s442ms 16 5 7s326ms 1s465ms 17 4 5s878ms 1s469ms 18 4 5s870ms 1s467ms 19 3 4s416ms 1s472ms 20 4 5s919ms 1s479ms 21 5 7s530ms 1s506ms 22 11 17s228ms 1s566ms 23 2 2s896ms 1s448ms Jun 13 00 2 2s994ms 1s497ms 01 6 8s819ms 1s469ms 02 6 8s867ms 1s477ms 03 4 5s815ms 1s453ms Jun 14 20 10 13s552ms 1s355ms 21 9 12s77ms 1s341ms 22 17 22s743ms 1s337ms 23 24 32s798ms 1s366ms [ User: pubeu - Total duration: 1m39s - Times executed: 63 ]
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2104297') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2104297') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 23:21:51 Duration: 5s536ms Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2095111') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2095111') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 22:21:18 Duration: 3s941ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = '2102363') or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '2102363') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-08 22:17:53 Duration: 3s628ms Database: ctdprd51 User: pubeu Bind query: yes
11 549 27m3s 1s 17s726ms 2s957ms select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 08 00 3 7s87ms 2s362ms 01 1 1s859ms 1s859ms 02 6 17s783ms 2s963ms 03 10 31s344ms 3s134ms 04 4 16s370ms 4s92ms 05 2 4s158ms 2s79ms 06 4 17s850ms 4s462ms 09 4 13s550ms 3s387ms 10 5 13s123ms 2s624ms 11 3 9s971ms 3s323ms 12 8 28s421ms 3s552ms 13 1 3s868ms 3s868ms 14 10 21s441ms 2s144ms 15 7 17s53ms 2s436ms 16 1 2s869ms 2s869ms 17 3 7s208ms 2s402ms 18 3 5s16ms 1s672ms 19 6 13s604ms 2s267ms 20 9 24s678ms 2s742ms 21 7 20s40ms 2s862ms 22 76 4m8s 3s270ms 23 39 1m39s 2s554ms Jun 09 00 1 1s736ms 1s736ms 06 5 12s133ms 2s426ms 07 5 7s596ms 1s519ms 08 1 1s14ms 1s14ms 09 4 6s571ms 1s642ms 10 1 3s312ms 3s312ms 11 3 3s636ms 1s212ms 12 10 17s748ms 1s774ms 13 11 16s349ms 1s486ms 14 3 10s123ms 3s374ms 15 1 1s328ms 1s328ms 16 6 13s82ms 2s180ms 17 7 13s551ms 1s935ms 18 10 17s868ms 1s786ms 19 1 1s22ms 1s22ms 21 6 21s659ms 3s609ms 22 5 12s121ms 2s424ms 23 9 10s33ms 1s114ms Jun 10 00 12 14s728ms 1s227ms 01 7 14s375ms 2s53ms 02 7 20s16ms 2s859ms 03 7 14s767ms 2s109ms 04 3 5s597ms 1s865ms 05 1 2s874ms 2s874ms 06 19 1m51s 5s859ms 07 1 1s52ms 1s52ms 08 1 1s25ms 1s25ms 09 1 1s5ms 1s5ms 10 1 1s23ms 1s23ms 11 2 2s721ms 1s360ms 12 1 1s459ms 1s459ms 13 4 9s715ms 2s428ms 15 1 2s805ms 2s805ms 16 4 12s672ms 3s168ms 17 3 16s965ms 5s655ms 18 1 1s181ms 1s181ms 19 3 8s936ms 2s978ms 20 1 1s63ms 1s63ms 22 1 1s50ms 1s50ms 23 2 13s229ms 6s614ms Jun 11 00 3 9s3ms 3s1ms 02 11 36s89ms 3s280ms 03 1 1s25ms 1s25ms 04 15 1m13s 4s908ms 08 1 1s153ms 1s153ms 09 2 2s101ms 1s50ms 10 5 19s141ms 3s828ms 11 4 16s793ms 4s198ms 12 43 2m37s 3s661ms 13 3 7s405ms 2s468ms 14 2 12s677ms 6s338ms 16 2 5s316ms 2s658ms 17 6 18s671ms 3s111ms 18 2 10s359ms 5s179ms 19 3 6s894ms 2s298ms 21 2 8s186ms 4s93ms 22 4 17s280ms 4s320ms 23 4 16s722ms 4s180ms Jun 12 03 2 9s427ms 4s713ms 04 1 6s802ms 6s802ms 05 3 4s405ms 1s468ms 06 2 12s569ms 6s284ms 09 2 2s823ms 1s411ms 10 2 2s70ms 1s35ms 11 2 8s575ms 4s287ms 13 1 2s853ms 2s853ms 15 1 1s29ms 1s29ms 17 2 2s541ms 1s270ms 18 1 2s375ms 2s375ms 19 1 6s449ms 6s449ms 20 3 6s671ms 2s223ms 21 13 35s238ms 2s710ms 22 2 3s424ms 1s712ms 23 2 5s537ms 2s768ms Jun 13 01 1 6s202ms 6s202ms 02 1 3s962ms 3s962ms 03 1 1s595ms 1s595ms Jun 14 20 1 2s324ms 2s324ms 21 4 9s767ms 2s441ms 23 4 11s271ms 2s817ms [ User: pubeu - Total duration: 9m42s - Times executed: 178 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '660706' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '660706') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:38:43 Duration: 17s726ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '743517' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '743517') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 11s579ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '924770' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '924770') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 9s738ms Database: ctdprd51 User: pubeu Bind query: yes
12 466 1h21m28s 1s19ms 52s752ms 10s490ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 08 00 2 3s611ms 1s805ms 01 4 25s180ms 6s295ms 02 6 1m1s 10s195ms 03 9 51s70ms 5s674ms 04 7 1m 8s675ms 05 9 1m14s 8s255ms 06 6 37s458ms 6s243ms 09 4 1m8s 17s15ms 10 7 1m17s 11s80ms 11 1 22s867ms 22s867ms 12 3 6s106ms 2s35ms 13 3 11s610ms 3s870ms 14 3 26s180ms 8s726ms 16 7 38s337ms 5s476ms 17 1 3s694ms 3s694ms 18 5 18s512ms 3s702ms 19 3 6s770ms 2s256ms 20 3 26s306ms 8s768ms 21 3 33s463ms 11s154ms 22 5 1m26s 17s342ms 23 1 1s623ms 1s623ms Jun 09 06 2 24s935ms 12s467ms 07 2 10s26ms 5s13ms 10 1 3s288ms 3s288ms 11 5 32s771ms 6s554ms 12 2 3s142ms 1s571ms 13 2 7s216ms 3s608ms 14 2 20s858ms 10s429ms 15 2 15s730ms 7s865ms 16 4 53s179ms 13s294ms 17 2 22s345ms 11s172ms 18 1 4s231ms 4s231ms 19 1 2s151ms 2s151ms 20 2 15s557ms 7s778ms Jun 10 00 2 21s702ms 10s851ms 01 4 28s337ms 7s84ms 02 5 27s164ms 5s432ms 03 2 20s778ms 10s389ms 04 2 21s531ms 10s765ms 06 1 22s917ms 22s917ms 08 1 1s352ms 1s352ms 09 1 23s246ms 23s246ms 11 2 11s265ms 5s632ms 12 1 8s936ms 8s936ms 13 3 45s543ms 15s181ms 14 2 2s952ms 1s476ms 15 4 1m12s 18s113ms 16 1 1s400ms 1s400ms 17 1 10s524ms 10s524ms 18 1 1s503ms 1s503ms 19 3 48s326ms 16s108ms 20 3 21s770ms 7s256ms 21 3 33s4ms 11s1ms 22 4 24s264ms 6s66ms 23 9 1m19s 8s817ms Jun 11 00 3 36s194ms 12s64ms 01 2 10s844ms 5s422ms 02 2 33s768ms 16s884ms 03 4 55s147ms 13s786ms 04 10 1m41s 10s153ms 05 3 34s828ms 11s609ms 06 7 2m1s 17s318ms 07 3 23s58ms 7s686ms 08 10 1m42s 10s232ms 09 4 14s469ms 3s617ms 10 6 1m18s 13s22ms 11 8 1m15s 9s426ms 12 56 16m6s 17s250ms 13 6 1m5s 10s854ms 14 1 12s169ms 12s169ms 15 4 22s165ms 5s541ms 16 8 1m25s 10s669ms 17 7 1m37s 13s928ms 18 7 1m9s 9s990ms 19 2 11s964ms 5s982ms 20 4 1m14s 18s555ms 21 6 59s279ms 9s879ms 22 7 1m33s 13s405ms 23 6 36s622ms 6s103ms Jun 12 00 5 50s155ms 10s31ms 01 1 1s59ms 1s59ms 02 2 14s9ms 7s4ms 03 2 15s920ms 7s960ms 04 3 32s549ms 10s849ms 05 5 1m2s 12s558ms 06 4 51s615ms 12s903ms 07 8 1m 7s505ms 08 3 30s664ms 10s221ms 09 3 15s141ms 5s47ms 10 4 44s579ms 11s144ms 12 4 1m 15s240ms 13 4 7s908ms 1s977ms 14 3 40s988ms 13s662ms 15 3 20s507ms 6s835ms 17 3 49s348ms 16s449ms 19 5 50s582ms 10s116ms 20 10 1m52s 11s292ms 21 5 53s737ms 10s747ms 22 3 8s37ms 2s679ms 23 5 57s773ms 11s554ms Jun 13 00 4 40s175ms 10s43ms 01 5 56s138ms 11s227ms 02 6 1m17s 12s872ms 03 1 11s229ms 11s229ms Jun 14 20 1 4s36ms 4s36ms 21 5 31s643ms 6s328ms 22 3 24s639ms 8s213ms 23 5 36s8ms 7s201ms [ User: pubeu - Total duration: 12m36s - Times executed: 64 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1234207') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:39:53 Duration: 52s752ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1275834') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:38:59 Duration: 47s803ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1276161') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:39:22 Duration: 45s995ms Bind query: yes
13 419 11m32s 1s49ms 4s645ms 1s651ms select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 08 00 9 16s72ms 1s785ms 01 4 6s509ms 1s627ms 02 4 5s928ms 1s482ms 03 3 4s98ms 1s366ms 04 4 7s221ms 1s805ms 05 11 17s400ms 1s581ms 06 6 10s786ms 1s797ms 09 4 7s361ms 1s840ms 10 4 6s388ms 1s597ms 11 3 4s513ms 1s504ms 12 1 1s816ms 1s816ms 13 4 6s794ms 1s698ms 14 4 6s852ms 1s713ms 15 4 6s877ms 1s719ms 16 4 7s553ms 1s888ms 17 3 4s463ms 1s487ms 18 3 4s421ms 1s473ms 19 4 5s129ms 1s282ms 20 5 8s608ms 1s721ms 21 4 7s811ms 1s952ms 22 10 14s533ms 1s453ms 23 4 8s35ms 2s8ms Jun 09 00 1 1s900ms 1s900ms 06 5 8s102ms 1s620ms 07 3 4s441ms 1s480ms 08 1 1s943ms 1s943ms 11 1 1s274ms 1s274ms 12 3 4s545ms 1s515ms 13 2 2s618ms 1s309ms 14 5 7s79ms 1s415ms 15 7 10s816ms 1s545ms 16 5 7s610ms 1s522ms 17 7 12s38ms 1s719ms 18 5 7s145ms 1s429ms 19 5 8s732ms 1s746ms 20 2 3s206ms 1s603ms 23 4 6s363ms 1s590ms Jun 10 00 4 6s938ms 1s734ms 01 7 10s832ms 1s547ms 02 1 1s272ms 1s272ms 03 1 1s872ms 1s872ms 04 2 3s172ms 1s586ms 05 5 8s90ms 1s618ms 09 1 1s892ms 1s892ms 10 2 3s265ms 1s632ms 11 5 8s287ms 1s657ms 12 2 3s204ms 1s602ms 15 2 3s845ms 1s922ms 16 1 1s284ms 1s284ms 17 2 3s240ms 1s620ms 18 1 1s908ms 1s908ms 20 5 7s830ms 1s566ms 21 2 3s227ms 1s613ms 22 2 2s724ms 1s362ms Jun 11 00 2 2s621ms 1s310ms 01 2 3s238ms 1s619ms 03 6 9s489ms 1s581ms 04 5 8s323ms 1s664ms 05 5 7s906ms 1s581ms 06 1 1s914ms 1s914ms 07 6 9s788ms 1s631ms 08 1 1s342ms 1s342ms 09 4 6s569ms 1s642ms 10 3 5s166ms 1s722ms 11 6 9s150ms 1s525ms 12 25 44s311ms 1s772ms 13 2 2s699ms 1s349ms 14 3 4s327ms 1s442ms 15 3 4s675ms 1s558ms 16 4 6s520ms 1s630ms 17 9 17s272ms 1s919ms 18 5 7s884ms 1s576ms 19 1 1s977ms 1s977ms 20 5 9s106ms 1s821ms 21 3 5s284ms 1s761ms 22 1 1s347ms 1s347ms 23 4 7s761ms 1s940ms Jun 12 00 7 11s128ms 1s589ms 01 2 4s39ms 2s19ms 02 3 5s886ms 1s962ms 03 2 2s832ms 1s416ms 04 2 3s770ms 1s885ms 05 7 11s516ms 1s645ms 06 3 5s116ms 1s705ms 08 5 8s778ms 1s755ms 09 1 1s997ms 1s997ms 10 3 5s820ms 1s940ms 11 3 4s583ms 1s527ms 12 8 13s321ms 1s665ms 13 2 3s292ms 1s646ms 14 6 9s923ms 1s653ms 15 2 3s291ms 1s645ms 17 5 7s853ms 1s570ms 19 2 3s380ms 1s690ms 20 5 8s626ms 1s725ms 22 2 3s236ms 1s618ms 23 7 11s662ms 1s666ms Jun 13 00 4 7s51ms 1s762ms 01 8 14s416ms 1s802ms 02 3 3s933ms 1s311ms 03 1 1s330ms 1s330ms Jun 14 20 2 3s125ms 1s562ms 21 6 9s555ms 1s592ms 22 8 12s712ms 1s589ms 23 1 1s339ms 1s339ms [ User: pubeu - Total duration: 1m37s - Times executed: 56 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-06-11 12:38:34 Duration: 4s645ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-06-11 17:10:29 Duration: 4s119ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-06-08 22:08:30 Duration: 3s149ms Database: ctdprd51 User: pubeu Bind query: yes
14 389 16m48s 1s1ms 10s558ms 2s592ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.ixn_id = any (array (( select ixn_id from ixn_anatomy where anatomy_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 08 00 9 19s380ms 2s153ms 01 9 25s854ms 2s872ms 02 4 5s345ms 1s336ms 03 9 19s814ms 2s201ms 04 2 3s238ms 1s619ms 05 3 10s150ms 3s383ms 06 7 11s889ms 1s698ms 08 1 1s46ms 1s46ms 09 7 16s495ms 2s356ms 10 5 13s96ms 2s619ms Jun 09 19 1 1s493ms 1s493ms 22 1 1s330ms 1s330ms Jun 10 03 1 1s142ms 1s142ms 04 1 1s493ms 1s493ms 07 1 1s620ms 1s620ms 09 1 1s262ms 1s262ms 10 1 1s588ms 1s588ms 11 1 1s520ms 1s520ms 12 5 26s920ms 5s384ms 13 4 17s937ms 4s484ms 14 1 1s12ms 1s12ms 15 2 9s338ms 4s669ms 16 2 9s781ms 4s890ms 17 5 20s516ms 4s103ms 18 3 11s253ms 3s751ms 19 6 22s17ms 3s669ms 20 7 17s788ms 2s541ms 21 2 3s327ms 1s663ms 22 6 16s90ms 2s681ms 23 4 12s206ms 3s51ms Jun 11 00 5 19s959ms 3s991ms 01 7 17s470ms 2s495ms 02 3 5s84ms 1s694ms 03 7 16s60ms 2s294ms 04 4 11s464ms 2s866ms 05 7 11s161ms 1s594ms 06 1 7s787ms 7s787ms 07 4 5s580ms 1s395ms 08 2 2s283ms 1s141ms 09 5 6s505ms 1s301ms 10 17 44s130ms 2s595ms 11 20 49s129ms 2s456ms 12 45 1m44s 2s325ms 13 4 7s6ms 1s751ms 14 4 5s616ms 1s404ms 15 6 15s668ms 2s611ms 16 8 18s389ms 2s298ms 17 2 2s912ms 1s456ms 18 7 18s917ms 2s702ms 19 10 22s132ms 2s213ms 20 4 12s864ms 3s216ms 21 8 11s299ms 1s412ms 22 3 10s784ms 3s594ms 23 7 37s489ms 5s355ms Jun 12 00 6 15s689ms 2s614ms 01 2 3s28ms 1s514ms 02 4 4s954ms 1s238ms 03 6 16s703ms 2s783ms 04 6 9s680ms 1s613ms 05 3 5s142ms 1s714ms 06 2 8s953ms 4s476ms 07 1 1s11ms 1s11ms 08 5 13s401ms 2s680ms 09 7 22s864ms 3s266ms 10 1 1s650ms 1s650ms 11 4 6s323ms 1s580ms 12 5 6s773ms 1s354ms 13 3 10s422ms 3s474ms 14 5 13s151ms 2s630ms 15 5 7s620ms 1s524ms 16 2 3s160ms 1s580ms 17 2 9s396ms 4s698ms 18 1 7s851ms 7s851ms 19 2 9s192ms 4s596ms 20 5 19s909ms 3s981ms 21 1 1s712ms 1s712ms 22 3 10s686ms 3s562ms 23 2 9s301ms 4s650ms Jun 13 00 1 7s802ms 7s802ms 01 1 1s43ms 1s43ms 02 1 7s832ms 7s832ms 03 1 1s719ms 1s719ms Jun 14 22 1 1s178ms 1s178ms [ User: pubeu - Total duration: 1m40s - Times executed: 38 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2111710')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 18:41:29 Duration: 10s558ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2111710')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:34:56 Duration: 9s168ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2111710')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:32:48 Duration: 9s103ms Database: ctdprd51 User: pubeu Bind query: yes
15 387 26m49s 1s 9s780ms 4s158ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 08 00 3 12s462ms 4s154ms 02 2 11s807ms 5s903ms 04 1 6s536ms 6s536ms 05 16 52s803ms 3s300ms 06 7 32s936ms 4s705ms 08 6 6s730ms 1s121ms 09 2 11s461ms 5s730ms 10 1 1s278ms 1s278ms 11 2 9s933ms 4s966ms 12 1 4s849ms 4s849ms 13 2 5s746ms 2s873ms 15 3 14s875ms 4s958ms 16 1 4s875ms 4s875ms 18 1 4s860ms 4s860ms 21 2 17s934ms 8s967ms 22 3 27s887ms 9s295ms 23 1 7s128ms 7s128ms Jun 09 05 7 11s750ms 1s678ms 06 1 1s80ms 1s80ms 07 2 7s53ms 3s526ms 09 2 7s54ms 3s527ms 10 3 3s135ms 1s45ms 12 1 1s40ms 1s40ms 13 1 5s484ms 5s484ms 14 1 5s461ms 5s461ms 15 6 25s156ms 4s192ms 16 2 10s554ms 5s277ms 17 8 32s370ms 4s46ms 19 2 11s635ms 5s817ms 21 3 3s114ms 1s38ms 22 5 14s997ms 2s999ms Jun 10 00 5 14s438ms 2s887ms 01 2 7s173ms 3s586ms 02 1 6s79ms 6s79ms 03 5 27s661ms 5s532ms 04 7 29s511ms 4s215ms 05 15 43s979ms 2s931ms 06 3 11s381ms 3s793ms 08 1 5s341ms 5s341ms 09 1 1s76ms 1s76ms 10 7 27s171ms 3s881ms 11 13 52s560ms 4s43ms 20 11 49s474ms 4s497ms 21 7 31s490ms 4s498ms 23 3 18s371ms 6s123ms Jun 11 01 2 2s188ms 1s94ms 02 2 7s127ms 3s563ms 03 10 38s279ms 3s827ms 04 15 1m15s 5s20ms 05 13 38s431ms 2s956ms 06 2 11s772ms 5s886ms 07 17 1m16s 4s510ms 12 1 6s24ms 6s24ms 13 1 5s969ms 5s969ms 14 1 5s870ms 5s870ms 15 6 21s499ms 3s583ms 16 5 14s881ms 2s976ms 17 12 51s896ms 4s324ms 18 2 11s868ms 5s934ms 19 1 1s89ms 1s89ms 20 1 5s836ms 5s836ms 21 1 6s53ms 6s53ms 22 4 14s248ms 3s562ms 23 2 12s901ms 6s450ms Jun 12 00 1 1s227ms 1s227ms 01 4 20s905ms 5s226ms 03 1 6s269ms 6s269ms 04 6 40s745ms 6s790ms 05 7 12s891ms 1s841ms 06 4 23s490ms 5s872ms 08 2 12s114ms 6s57ms 09 1 6s277ms 6s277ms 12 19 1m26s 4s578ms 13 1 1s81ms 1s81ms 14 23 1m36s 4s190ms 16 1 1s74ms 1s74ms 18 1 1s81ms 1s81ms 19 2 13s216ms 6s608ms 21 2 7s705ms 3s852ms 23 7 35s60ms 5s8ms Jun 13 00 8 36s411ms 4s551ms 01 8 35s837ms 4s479ms Jun 14 20 3 10s104ms 3s368ms 21 1 1s 1s 22 5 29s735ms 5s947ms 23 3 22s238ms 7s412ms [ User: pubeu - Total duration: 2m54s - Times executed: 37 ]
[ User: qaeu - Total duration: 5s778ms - Times executed: 5 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1299718' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 22:43:48 Duration: 9s780ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1414209' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 21:20:28 Duration: 9s621ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1326390' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 22:17:57 Duration: 9s445ms Database: ctdprd51 User: pubeu Bind query: yes
16 383 10m22s 1s407ms 2s206ms 1s625ms select t.nm;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 08 00 6 9s471ms 1s578ms 01 15 23s465ms 1s564ms 02 12 18s906ms 1s575ms 03 4 6s67ms 1s516ms 04 13 19s907ms 1s531ms 05 3 4s493ms 1s497ms 06 5 8s456ms 1s691ms 08 1 2s206ms 2s206ms 09 4 6s170ms 1s542ms 10 1 1s587ms 1s587ms Jun 09 12 1 1s638ms 1s638ms 18 1 1s665ms 1s665ms 20 1 1s637ms 1s637ms Jun 10 02 1 1s668ms 1s668ms 05 1 1s664ms 1s664ms 09 2 3s334ms 1s667ms 10 1 1s454ms 1s454ms 12 2 3s130ms 1s565ms 13 2 3s245ms 1s622ms 14 5 8s63ms 1s612ms 15 5 7s851ms 1s570ms 16 4 6s489ms 1s622ms 17 7 10s785ms 1s540ms 18 4 6s347ms 1s586ms 19 5 7s879ms 1s575ms 20 7 11s208ms 1s601ms 21 3 4s875ms 1s625ms 22 11 17s616ms 1s601ms 23 11 17s921ms 1s629ms Jun 11 00 7 11s713ms 1s673ms 01 13 20s582ms 1s583ms 02 4 6s161ms 1s540ms 03 1 1s648ms 1s648ms 04 2 3s210ms 1s605ms 05 1 1s609ms 1s609ms 06 3 4s666ms 1s555ms 07 3 4s769ms 1s589ms 08 4 6s449ms 1s612ms 09 5 7s877ms 1s575ms 10 4 6s264ms 1s566ms 11 6 9s409ms 1s568ms 12 4 6s481ms 1s620ms 13 8 13s238ms 1s654ms 14 4 6s495ms 1s623ms 15 2 3s282ms 1s641ms 16 5 7s965ms 1s593ms 17 5 7s960ms 1s592ms 18 7 11s514ms 1s644ms 19 5 8s81ms 1s616ms 20 4 6s496ms 1s624ms 21 13 20s863ms 1s604ms 22 6 9s810ms 1s635ms 23 7 11s639ms 1s662ms Jun 12 00 9 14s945ms 1s660ms 01 2 3s256ms 1s628ms 02 4 6s615ms 1s653ms 03 3 5s450ms 1s816ms 04 3 5s319ms 1s773ms 05 7 11s901ms 1s700ms 06 2 3s440ms 1s720ms 07 2 3s479ms 1s739ms 08 4 6s339ms 1s584ms 09 1 1s666ms 1s666ms 10 6 9s717ms 1s619ms 11 6 9s881ms 1s646ms 12 3 4s869ms 1s623ms 13 9 15s207ms 1s689ms 14 6 10s57ms 1s676ms 15 7 11s863ms 1s694ms 16 5 8s508ms 1s701ms 17 8 13s462ms 1s682ms 18 2 3s540ms 1s770ms 19 4 6s397ms 1s599ms 20 6 10s419ms 1s736ms 21 7 12s136ms 1s733ms 22 1 1s789ms 1s789ms 23 1 1s652ms 1s652ms Jun 13 00 3 5s62ms 1s687ms 01 6 10s144ms 1s690ms 02 2 3s417ms 1s708ms 03 3 4s707ms 1s569ms [ User: pubeu - Total duration: 40s571ms - Times executed: 25 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm;
Date: 2025-06-08 08:52:46 Duration: 2s206ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm;
Date: 2025-06-08 06:41:05 Duration: 2s178ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm;
Date: 2025-06-11 00:01:55 Duration: 2s170ms Bind query: yes
17 381 1h57m50s 1s121ms 1m19s 18s557ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 08 00 3 51s340ms 17s113ms 03 9 2m48s 18s727ms 04 2 42s226ms 21s113ms 06 3 1m1s 20s619ms 09 3 55s920ms 18s640ms 11 1 1s320ms 1s320ms 14 7 2m9s 18s559ms 18 6 1m52s 18s727ms 19 2 34s153ms 17s76ms 22 3 3m33s 1m11s Jun 09 05 3 48s562ms 16s187ms 06 3 50s795ms 16s931ms 07 4 1m7s 16s921ms 09 6 1m42s 17s72ms 10 3 55s218ms 18s406ms 11 3 47s643ms 15s881ms 12 8 2m34s 19s303ms 14 4 1m13s 18s471ms 15 5 1m32s 18s495ms 16 4 1m10s 17s734ms 17 9 2m37s 17s467ms 18 7 2m2s 17s473ms 19 8 1m56s 14s573ms 20 3 54s763ms 18s254ms 22 6 1m35s 15s945ms 23 3 53s136ms 17s712ms Jun 10 00 9 2m41s 17s991ms 01 9 2m34s 17s115ms 02 3 53s945ms 17s981ms 03 3 51s987ms 17s329ms 04 6 1m42s 17s132ms 05 6 1m31s 15s308ms 06 5 1m26s 17s249ms 07 2 36s903ms 18s451ms 08 3 54s293ms 18s97ms 09 2 20s18ms 10s9ms 10 3 49s963ms 16s654ms 11 9 2m45s 18s334ms 12 6 1m36s 16s128ms 13 14 6m41s 28s659ms 14 1 3s44ms 3s44ms 15 6 1m44s 17s409ms 16 15 4m42s 18s819ms 18 6 1m50s 18s481ms 19 6 1m45s 17s529ms 20 7 1m55s 16s564ms 21 3 53s228ms 17s742ms 22 3 52s156ms 17s385ms 23 7 1m46s 15s148ms Jun 11 00 5 1m39s 19s854ms 01 6 1m41s 16s934ms 02 3 52s898ms 17s632ms 03 3 55s 18s333ms 05 7 1m52s 16s130ms 06 1 1s326ms 1s326ms 09 1 1s121ms 1s121ms 10 1 8s513ms 8s513ms 12 6 2m24s 24s144ms 14 3 53s481ms 17s827ms 18 3 1m21s 27s148ms 20 4 57s325ms 14s331ms 21 12 3m40s 18s384ms 22 9 2m48s 18s726ms Jun 12 01 3 1m6s 22s47ms 03 3 54s258ms 18s86ms 04 3 55s541ms 18s513ms 05 3 56s793ms 18s931ms 06 5 1m30s 18s189ms 07 6 1m49s 18s287ms 09 5 1m30s 18s60ms 10 1 5s48ms 5s48ms 11 3 57s386ms 19s128ms 12 6 1m49s 18s199ms 16 9 2m30s 16s701ms 17 4 1m48s 27s223ms 19 3 55s387ms 18s462ms 21 1 17s339ms 17s339ms 22 3 51s482ms 17s160ms Jun 13 02 1 1s304ms 1s304ms Jun 14 22 3 1m15s 25s69ms 23 3 1m 20s299ms [ User: pubeu - Total duration: 21m6s - Times executed: 63 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102567') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-10 13:16:12 Duration: 1m19s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102635') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-08 22:15:57 Duration: 1m14s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102635') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-08 22:16:13 Duration: 1m13s Database: ctdprd51 User: pubeu Bind query: yes
18 331 35m1s 1s 32s848ms 6s349ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 08 00 3 24s769ms 8s256ms 01 2 18s768ms 9s384ms 02 3 22s196ms 7s398ms 03 4 11s788ms 2s947ms 04 5 6s222ms 1s244ms 05 2 2s249ms 1s124ms 06 4 22s586ms 5s646ms 09 7 21s353ms 3s50ms 10 2 20s333ms 10s166ms 11 3 23s297ms 7s765ms 12 1 1s309ms 1s309ms 13 3 9s47ms 3s15ms 14 1 1s162ms 1s162ms 15 3 8s393ms 2s797ms 16 3 18s127ms 6s42ms 17 2 6s99ms 3s49ms 18 3 24s475ms 8s158ms 19 3 35s50ms 11s683ms 20 3 32s661ms 10s887ms 21 5 40s514ms 8s102ms 22 8 51s148ms 6s393ms 23 2 16s152ms 8s76ms Jun 09 00 1 1s116ms 1s116ms 07 1 6s457ms 6s457ms 08 1 3s148ms 3s148ms 09 1 2s874ms 2s874ms 10 2 2s222ms 1s111ms 12 3 25s147ms 8s382ms 13 2 12s904ms 6s452ms 14 2 18s896ms 9s448ms 15 2 12s895ms 6s447ms 16 3 23s241ms 7s747ms 17 4 35s957ms 8s989ms 18 3 4s564ms 1s521ms 19 1 3s116ms 3s116ms 20 2 4s868ms 2s434ms 22 4 22s127ms 5s531ms 23 3 3s472ms 1s157ms Jun 10 00 3 17s380ms 5s793ms 01 1 3s691ms 3s691ms 02 1 16s917ms 16s917ms 03 3 39s478ms 13s159ms 04 3 7s397ms 2s465ms 07 1 1s91ms 1s91ms 10 2 19s450ms 9s725ms 11 1 1s170ms 1s170ms 12 2 18s153ms 9s76ms 13 1 17s567ms 17s567ms 15 2 2s198ms 1s99ms 16 2 35s362ms 17s681ms 17 2 18s412ms 9s206ms 19 1 1s124ms 1s124ms 20 2 2s278ms 1s139ms 22 2 19s483ms 9s741ms 23 5 22s652ms 4s530ms Jun 11 00 3 54s349ms 18s116ms 01 2 2s370ms 1s185ms 02 1 17s470ms 17s470ms 04 3 36s127ms 12s42ms 05 2 19s438ms 9s719ms 06 6 39s317ms 6s552ms 07 3 21s459ms 7s153ms 08 5 27s878ms 5s575ms 09 8 59s580ms 7s447ms 10 4 25s936ms 6s484ms 11 4 23s111ms 5s777ms 12 27 2m17s 5s102ms 13 4 39s268ms 9s817ms 14 2 35s774ms 17s887ms 15 3 21s732ms 7s244ms 16 3 22s17ms 7s339ms 17 3 5s714ms 1s904ms 18 6 57s1ms 9s500ms 19 2 2s258ms 1s129ms 20 4 22s517ms 5s629ms 21 6 23s846ms 3s974ms 22 7 1m 8s593ms 23 2 13s809ms 6s904ms Jun 12 00 5 22s562ms 4s512ms 01 3 22s204ms 7s401ms 02 4 22s287ms 5s571ms 03 8 1m9s 8s722ms 04 2 2s475ms 1s237ms 05 4 4s742ms 1s185ms 06 2 3s485ms 1s742ms 07 2 8s160ms 4s80ms 08 2 20s348ms 10s174ms 09 1 3s899ms 3s899ms 11 3 27s600ms 9s200ms 12 3 14s232ms 4s744ms 13 5 33s90ms 6s618ms 14 4 25s371ms 6s342ms 15 1 1s120ms 1s120ms 16 3 42s172ms 14s57ms 17 1 17s385ms 17s385ms 18 1 17s605ms 17s605ms 19 2 13s933ms 6s966ms 20 2 2s395ms 1s197ms 21 5 25s632ms 5s126ms 22 1 1s161ms 1s161ms 23 2 6s36ms 3s18ms Jun 13 00 3 31s643ms 10s547ms 01 5 10s769ms 2s153ms 02 2 18s974ms 9s487ms 03 1 4s926ms 4s926ms Jun 14 21 1 1s377ms 1s377ms 23 2 12s718ms 6s359ms [ User: pubeu - Total duration: 4m48s - Times executed: 43 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-08 22:24:57 Duration: 32s848ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:40:05 Duration: 29s238ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:25:41 Duration: 20s790ms Bind query: yes
19 315 9m30s 1s7ms 4s140ms 1s810ms select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 08 00 5 8s437ms 1s687ms 01 6 8s278ms 1s379ms 02 3 6s758ms 2s252ms 03 5 7s772ms 1s554ms 04 6 11s30ms 1s838ms 05 6 11s624ms 1s937ms 06 5 11s756ms 2s351ms 10 5 11s178ms 2s235ms 11 2 2s798ms 1s399ms 15 1 2s311ms 2s311ms 16 1 1s12ms 1s12ms 18 1 2s400ms 2s400ms 19 1 2s462ms 2s462ms 21 1 1s287ms 1s287ms 23 2 3s37ms 1s518ms Jun 09 05 1 1s108ms 1s108ms 11 1 1s198ms 1s198ms 12 1 1s816ms 1s816ms 13 1 1s90ms 1s90ms 14 1 1s731ms 1s731ms 22 1 1s688ms 1s688ms Jun 10 03 1 1s313ms 1s313ms 04 2 4s551ms 2s275ms 09 1 1s66ms 1s66ms 11 3 3s899ms 1s299ms 12 3 5s437ms 1s812ms 13 2 3s569ms 1s784ms 15 5 7s848ms 1s569ms 16 1 1s205ms 1s205ms 17 1 1s144ms 1s144ms 18 2 2s784ms 1s392ms 19 1 1s348ms 1s348ms 20 3 4s10ms 1s336ms 21 3 6s139ms 2s46ms 22 3 5s380ms 1s793ms 23 2 4s113ms 2s56ms Jun 11 00 2 2s299ms 1s149ms 01 2 2s770ms 1s385ms 02 4 8s710ms 2s177ms 03 3 4s651ms 1s550ms 04 1 2s493ms 2s493ms 06 1 1s893ms 1s893ms 07 3 5s309ms 1s769ms 08 4 8s209ms 2s52ms 09 4 9s64ms 2s266ms 10 5 9s354ms 1s870ms 11 12 25s280ms 2s106ms 12 61 1m55s 1s888ms 13 3 4s597ms 1s532ms 14 7 11s517ms 1s645ms 15 3 5s501ms 1s833ms 16 7 9s592ms 1s370ms 17 5 7s805ms 1s561ms 18 6 10s556ms 1s759ms 19 4 5s903ms 1s475ms 20 4 7s877ms 1s969ms 21 7 14s88ms 2s12ms 22 4 5s219ms 1s304ms 23 3 5s309ms 1s769ms Jun 12 00 4 8s775ms 2s193ms 01 1 3s152ms 3s152ms 02 1 2s903ms 2s903ms 03 1 1s376ms 1s376ms 04 4 7s315ms 1s828ms 05 7 14s715ms 2s102ms 06 2 4s408ms 2s204ms 07 3 5s37ms 1s679ms 08 3 4s323ms 1s441ms 09 3 5s160ms 1s720ms 10 2 2s359ms 1s179ms 11 3 3s415ms 1s138ms 13 3 6s392ms 2s130ms 14 3 4s600ms 1s533ms 16 1 2s828ms 2s828ms 17 1 1s592ms 1s592ms 18 3 4s533ms 1s511ms 19 5 11s229ms 2s245ms 20 1 1s392ms 1s392ms 21 4 7s523ms 1s880ms 23 2 2s971ms 1s485ms Jun 13 00 3 4s248ms 1s416ms 01 4 8s670ms 2s167ms 02 1 1s795ms 1s795ms 03 2 4s161ms 2s80ms Jun 14 20 2 3s828ms 1s914ms 22 1 2s701ms 2s701ms 23 1 1s42ms 1s42ms [ User: pubeu - Total duration: 1m5s - Times executed: 34 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100109') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:39:26 Duration: 4s140ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2094859') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-08 06:12:02 Duration: 3s671ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2099635') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:37:35 Duration: 3s483ms Bind query: yes
20 275 17h54m16s 1s209ms 21m16s 3m54s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 08 00 4 7s209ms 1s802ms 01 5 12m3s 2m24s 02 2 4m33s 2m16s 03 4 22m52s 5m43s 04 3 18m40s 6m13s 05 2 18m34s 9m17s 06 3 5s99ms 1s699ms 09 3 8m13s 2m44s 10 2 6s705ms 3s352ms 11 2 3m38s 1m49s 12 3 5s837ms 1s945ms 13 3 18m13s 6m4s 14 2 4s144ms 2s72ms 15 5 9m43s 1m56s 16 2 4s68ms 2s34ms 17 2 5s168ms 2s584ms 18 1 3s347ms 3s347ms 19 5 9m7s 1m49s 20 1 2s491ms 2s491ms 21 2 5m20s 2m40s 22 1 4m31s 4m31s 23 1 5s621ms 5s621ms Jun 09 05 2 4s331ms 2s165ms 06 2 1m51s 55s964ms 07 1 1s908ms 1s908ms 08 3 6s865ms 2s288ms 12 4 9s226ms 2s306ms 13 3 6s333ms 2s111ms 15 4 14m29s 3m37s 16 2 4m9s 2m4s 17 4 9s500ms 2s375ms 18 3 28m37s 9m32s 19 3 4m20s 1m26s 23 4 13m49s 3m27s Jun 10 00 3 18m18s 6m6s 01 2 4m49s 2m24s 02 4 6m41s 1m40s 03 2 5s189ms 2s594ms 04 1 3m40s 3m40s 05 1 3m8s 3m8s 07 1 3s381ms 3s381ms 12 1 18m41s 18m41s 13 1 1s536ms 1s536ms 14 1 1s513ms 1s513ms 15 3 18m35s 6m11s 16 1 1s623ms 1s623ms 19 2 18m32s 9m16s 22 1 3s625ms 3s625ms 23 1 1s608ms 1s608ms Jun 11 00 2 18m34s 9m17s 01 1 1s594ms 1s594ms 02 2 18m31s 9m15s 03 2 5s183ms 2s591ms 04 4 18m26s 4m36s 06 2 18m18s 9m9s 07 3 18m28s 6m9s 08 1 3s490ms 3s490ms 09 2 18m29s 9m14s 10 4 37m36s 9m24s 11 3 18m42s 6m14s 12 24 2h41m32s 6m43s 13 4 37m12s 9m18s 14 5 32m17s 6m27s 15 2 18m18s 9m9s 16 3 37m32s 12m30s 17 1 3s436ms 3s436ms 18 4 37m14s 9m18s 19 2 18m37s 9m18s 20 4 8s543ms 2s135ms 21 4 13s874ms 3s468ms 22 2 5s233ms 2s616ms 23 5 20m27s 4m5s Jun 12 00 2 18m36s 9m18s 01 1 2s525ms 2s525ms 02 4 40m19s 10m4s 03 1 1s625ms 1s625ms 04 1 19m49s 19m49s 06 4 18m27s 4m36s 07 1 1s767ms 1s767ms 08 2 6s999ms 3s499ms 09 6 8m56s 1m29s 10 1 2s79ms 2s79ms 11 3 8s353ms 2s784ms 12 2 6s976ms 3s488ms 13 1 1s651ms 1s651ms 14 5 11s161ms 2s232ms 15 3 19m33s 6m31s 17 2 36m49s 18m24s 18 3 5s668ms 1s889ms 19 5 18m42s 3m44s 20 2 5s378ms 2s689ms 21 5 42m46s 8m33s 22 2 18m29s 9m14s 23 2 3s210ms 1s605ms Jun 13 00 3 5s313ms 1s771ms 01 3 8s490ms 2s830ms 02 1 3s345ms 3s345ms 03 1 2m9s 2m9s Jun 14 20 1 3s878ms 3s878ms 21 1 2s89ms 2s89ms 22 1 2s7ms 2s7ms 23 2 4s196ms 2s98ms [ User: pubeu - Total duration: 3h46m54s - Times executed: 33 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 14:09:48 Duration: 21m16s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:47:39 Duration: 21m13s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:45:57 Duration: 20m34s Database: ctdprd51 User: pubeu Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 8h11m32s 8h11m32s 8h11m32s 1 8h11m32s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ?))) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 13 02 1 8h11m32s 8h11m32s -
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'DEPRESSIVE DISORDER, MAJOR' AND t.object_type_id = 3))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2025-06-13 02:19:38 Duration: 8h11m32s Bind query: yes
2 11m57s 12m1s 11m59s 2 23m59s select gcr.ixn_id, null, gcr.gene_id, gcr.taxon_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gli.term_id gene_id from term_label gli where gli.object_type_id = ? and upper(gli.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?) intersect ( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?) intersect ( select tp.term_id from term_pathway tp where tp.object_type_id = ? and upper(tp.pathway_acc_txt) = ? and tp.pathway_acc_db_cd = ?))) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?));Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 09 06 2 23m59s 11m59s [ User: pubeu - Total duration: 12m1s - Times executed: 1 ]
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, gcr.gene_id, gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE 'TTN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'SQUAMOUS CELL CARCINOMA OF HEAD AND NECK' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA05200' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7));
Date: 2025-06-09 06:06:51 Duration: 12m1s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id, NULL, gcr.gene_id, gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE 'TTN') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5) INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'SQUAMOUS CELL CARCINOMA OF HEAD AND NECK' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0) INTERSECT ( SELECT /* IQH.getMasterPathwayWhereEquals.Acc */ tp.term_id FROM term_pathway tp WHERE tp.object_type_id = 4 AND UPPER(tp.pathway_acc_txt) = 'HSA05200' AND tp.pathway_acc_db_cd = 'KEGG'))) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7));
Date: 2025-06-09 06:23:10 Duration: 11m57s Bind query: yes
3 6m43s 9m19s 7m54s 6 47m25s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 08 00 1 8m53s 8m53s Jun 09 00 1 9m19s 9m19s Jun 10 00 1 6m43s 6m43s Jun 11 00 1 7m2s 7m2s Jun 12 00 1 7m43s 7m43s Jun 13 00 1 7m43s 7m43s -
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-06-09 00:09:21 Duration: 9m19s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-06-08 00:08:54 Duration: 8m53s
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2025-06-13 00:07:44 Duration: 7m43s
4 1s209ms 21m16s 3m54s 275 17h54m16s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 08 00 4 7s209ms 1s802ms 01 5 12m3s 2m24s 02 2 4m33s 2m16s 03 4 22m52s 5m43s 04 3 18m40s 6m13s 05 2 18m34s 9m17s 06 3 5s99ms 1s699ms 09 3 8m13s 2m44s 10 2 6s705ms 3s352ms 11 2 3m38s 1m49s 12 3 5s837ms 1s945ms 13 3 18m13s 6m4s 14 2 4s144ms 2s72ms 15 5 9m43s 1m56s 16 2 4s68ms 2s34ms 17 2 5s168ms 2s584ms 18 1 3s347ms 3s347ms 19 5 9m7s 1m49s 20 1 2s491ms 2s491ms 21 2 5m20s 2m40s 22 1 4m31s 4m31s 23 1 5s621ms 5s621ms Jun 09 05 2 4s331ms 2s165ms 06 2 1m51s 55s964ms 07 1 1s908ms 1s908ms 08 3 6s865ms 2s288ms 12 4 9s226ms 2s306ms 13 3 6s333ms 2s111ms 15 4 14m29s 3m37s 16 2 4m9s 2m4s 17 4 9s500ms 2s375ms 18 3 28m37s 9m32s 19 3 4m20s 1m26s 23 4 13m49s 3m27s Jun 10 00 3 18m18s 6m6s 01 2 4m49s 2m24s 02 4 6m41s 1m40s 03 2 5s189ms 2s594ms 04 1 3m40s 3m40s 05 1 3m8s 3m8s 07 1 3s381ms 3s381ms 12 1 18m41s 18m41s 13 1 1s536ms 1s536ms 14 1 1s513ms 1s513ms 15 3 18m35s 6m11s 16 1 1s623ms 1s623ms 19 2 18m32s 9m16s 22 1 3s625ms 3s625ms 23 1 1s608ms 1s608ms Jun 11 00 2 18m34s 9m17s 01 1 1s594ms 1s594ms 02 2 18m31s 9m15s 03 2 5s183ms 2s591ms 04 4 18m26s 4m36s 06 2 18m18s 9m9s 07 3 18m28s 6m9s 08 1 3s490ms 3s490ms 09 2 18m29s 9m14s 10 4 37m36s 9m24s 11 3 18m42s 6m14s 12 24 2h41m32s 6m43s 13 4 37m12s 9m18s 14 5 32m17s 6m27s 15 2 18m18s 9m9s 16 3 37m32s 12m30s 17 1 3s436ms 3s436ms 18 4 37m14s 9m18s 19 2 18m37s 9m18s 20 4 8s543ms 2s135ms 21 4 13s874ms 3s468ms 22 2 5s233ms 2s616ms 23 5 20m27s 4m5s Jun 12 00 2 18m36s 9m18s 01 1 2s525ms 2s525ms 02 4 40m19s 10m4s 03 1 1s625ms 1s625ms 04 1 19m49s 19m49s 06 4 18m27s 4m36s 07 1 1s767ms 1s767ms 08 2 6s999ms 3s499ms 09 6 8m56s 1m29s 10 1 2s79ms 2s79ms 11 3 8s353ms 2s784ms 12 2 6s976ms 3s488ms 13 1 1s651ms 1s651ms 14 5 11s161ms 2s232ms 15 3 19m33s 6m31s 17 2 36m49s 18m24s 18 3 5s668ms 1s889ms 19 5 18m42s 3m44s 20 2 5s378ms 2s689ms 21 5 42m46s 8m33s 22 2 18m29s 9m14s 23 2 3s210ms 1s605ms Jun 13 00 3 5s313ms 1s771ms 01 3 8s490ms 2s830ms 02 1 3s345ms 3s345ms 03 1 2m9s 2m9s Jun 14 20 1 3s878ms 3s878ms 21 1 2s89ms 2s89ms 22 1 2s7ms 2s7ms 23 2 4s196ms 2s98ms [ User: pubeu - Total duration: 3h46m54s - Times executed: 33 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 14:09:48 Duration: 21m16s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:47:39 Duration: 21m13s Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1258019') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:45:57 Duration: 20m34s Database: ctdprd51 User: pubeu Bind query: yes
5 1m16s 1m18s 1m17s 20 25m54s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 08 06 1 1m17s 1m17s 10 1 1m17s 1m17s 14 1 1m16s 1m16s 18 1 1m17s 1m17s Jun 09 06 1 1m17s 1m17s 10 1 1m16s 1m16s 14 1 1m17s 1m17s 18 1 1m16s 1m16s Jun 10 06 1 1m17s 1m17s 10 1 1m17s 1m17s 14 1 1m17s 1m17s 18 1 1m17s 1m17s Jun 11 06 1 1m18s 1m18s 10 1 1m18s 1m18s 14 1 1m18s 1m18s 18 1 1m17s 1m17s Jun 12 06 1 1m18s 1m18s 10 1 1m18s 1m18s 14 1 1m18s 1m18s 18 1 1m18s 1m18s [ User: postgres - Total duration: 25m54s - Times executed: 20 ]
[ Application: pg_dump - Total duration: 25m54s - Times executed: 20 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2025-06-12 14:06:21 Duration: 1m18s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2025-06-11 10:06:20 Duration: 1m18s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2025-06-12 18:06:20 Duration: 1m18s Database: ctdprd51 User: postgres Application: pg_dump
6 1s121ms 1m19s 18s557ms 381 1h57m50s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 08 00 3 51s340ms 17s113ms 03 9 2m48s 18s727ms 04 2 42s226ms 21s113ms 06 3 1m1s 20s619ms 09 3 55s920ms 18s640ms 11 1 1s320ms 1s320ms 14 7 2m9s 18s559ms 18 6 1m52s 18s727ms 19 2 34s153ms 17s76ms 22 3 3m33s 1m11s Jun 09 05 3 48s562ms 16s187ms 06 3 50s795ms 16s931ms 07 4 1m7s 16s921ms 09 6 1m42s 17s72ms 10 3 55s218ms 18s406ms 11 3 47s643ms 15s881ms 12 8 2m34s 19s303ms 14 4 1m13s 18s471ms 15 5 1m32s 18s495ms 16 4 1m10s 17s734ms 17 9 2m37s 17s467ms 18 7 2m2s 17s473ms 19 8 1m56s 14s573ms 20 3 54s763ms 18s254ms 22 6 1m35s 15s945ms 23 3 53s136ms 17s712ms Jun 10 00 9 2m41s 17s991ms 01 9 2m34s 17s115ms 02 3 53s945ms 17s981ms 03 3 51s987ms 17s329ms 04 6 1m42s 17s132ms 05 6 1m31s 15s308ms 06 5 1m26s 17s249ms 07 2 36s903ms 18s451ms 08 3 54s293ms 18s97ms 09 2 20s18ms 10s9ms 10 3 49s963ms 16s654ms 11 9 2m45s 18s334ms 12 6 1m36s 16s128ms 13 14 6m41s 28s659ms 14 1 3s44ms 3s44ms 15 6 1m44s 17s409ms 16 15 4m42s 18s819ms 18 6 1m50s 18s481ms 19 6 1m45s 17s529ms 20 7 1m55s 16s564ms 21 3 53s228ms 17s742ms 22 3 52s156ms 17s385ms 23 7 1m46s 15s148ms Jun 11 00 5 1m39s 19s854ms 01 6 1m41s 16s934ms 02 3 52s898ms 17s632ms 03 3 55s 18s333ms 05 7 1m52s 16s130ms 06 1 1s326ms 1s326ms 09 1 1s121ms 1s121ms 10 1 8s513ms 8s513ms 12 6 2m24s 24s144ms 14 3 53s481ms 17s827ms 18 3 1m21s 27s148ms 20 4 57s325ms 14s331ms 21 12 3m40s 18s384ms 22 9 2m48s 18s726ms Jun 12 01 3 1m6s 22s47ms 03 3 54s258ms 18s86ms 04 3 55s541ms 18s513ms 05 3 56s793ms 18s931ms 06 5 1m30s 18s189ms 07 6 1m49s 18s287ms 09 5 1m30s 18s60ms 10 1 5s48ms 5s48ms 11 3 57s386ms 19s128ms 12 6 1m49s 18s199ms 16 9 2m30s 16s701ms 17 4 1m48s 27s223ms 19 3 55s387ms 18s462ms 21 1 17s339ms 17s339ms 22 3 51s482ms 17s160ms Jun 13 02 1 1s304ms 1s304ms Jun 14 22 3 1m15s 25s69ms 23 3 1m 20s299ms [ User: pubeu - Total duration: 21m6s - Times executed: 63 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102567') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-10 13:16:12 Duration: 1m19s Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102635') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-08 22:15:57 Duration: 1m14s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2102635') ORDER BY g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-08 22:16:13 Duration: 1m13s Database: ctdprd51 User: pubeu Bind query: yes
7 1s26ms 3m11s 13s436ms 165 36m56s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 08 06 24 2m4s 5s201ms 07 1 4s195ms 4s195ms 09 11 13s954ms 1s268ms 11 10 16s364ms 1s636ms 12 1 2s688ms 2s688ms 13 3 6s338ms 2s112ms 21 1 1s26ms 1s26ms 22 15 1m44s 6s961ms 23 6 3m53s 38s967ms Jun 09 00 7 5m15s 45s88ms 08 8 5m26s 40s823ms 10 3 1m38s 32s899ms 11 1 1s129ms 1s129ms 12 1 2s714ms 2s714ms 16 1 1s222ms 1s222ms 18 1 2s298ms 2s298ms 20 2 1m35s 47s780ms 21 8 3m16s 24s589ms Jun 10 01 2 2s530ms 1s265ms 02 3 2m24s 48s247ms 04 2 1m24s 42s174ms 09 14 50s710ms 3s622ms 12 1 1s683ms 1s683ms Jun 11 01 1 1s238ms 1s238ms 03 3 2m22s 47s553ms 10 2 49s336ms 24s668ms 11 1 1s863ms 1s863ms 23 1 10s428ms 10s428ms Jun 12 03 1 1s790ms 1s790ms 07 5 52s777ms 10s555ms 11 3 6s263ms 2s87ms 17 3 7s160ms 2s386ms 22 2 43s57ms 21s528ms 23 1 1s712ms 1s712ms Jun 13 00 1 3s678ms 3s678ms 03 1 2s77ms 2s77ms Jun 14 20 2 3s126ms 1s563ms 21 4 9s719ms 2s429ms 22 6 30s421ms 5s70ms 23 2 17s448ms 8s724ms [ User: pubeu - Total duration: 16m2s - Times executed: 54 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2105953') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-06-08 23:21:45 Duration: 3m11s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2099568') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-06-09 00:14:13 Duration: 2m49s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2099635') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2025-06-10 02:39:39 Duration: 51s533ms Database: ctdprd51 User: pubeu Bind query: yes
8 1s19ms 52s752ms 10s490ms 466 1h21m28s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 08 00 2 3s611ms 1s805ms 01 4 25s180ms 6s295ms 02 6 1m1s 10s195ms 03 9 51s70ms 5s674ms 04 7 1m 8s675ms 05 9 1m14s 8s255ms 06 6 37s458ms 6s243ms 09 4 1m8s 17s15ms 10 7 1m17s 11s80ms 11 1 22s867ms 22s867ms 12 3 6s106ms 2s35ms 13 3 11s610ms 3s870ms 14 3 26s180ms 8s726ms 16 7 38s337ms 5s476ms 17 1 3s694ms 3s694ms 18 5 18s512ms 3s702ms 19 3 6s770ms 2s256ms 20 3 26s306ms 8s768ms 21 3 33s463ms 11s154ms 22 5 1m26s 17s342ms 23 1 1s623ms 1s623ms Jun 09 06 2 24s935ms 12s467ms 07 2 10s26ms 5s13ms 10 1 3s288ms 3s288ms 11 5 32s771ms 6s554ms 12 2 3s142ms 1s571ms 13 2 7s216ms 3s608ms 14 2 20s858ms 10s429ms 15 2 15s730ms 7s865ms 16 4 53s179ms 13s294ms 17 2 22s345ms 11s172ms 18 1 4s231ms 4s231ms 19 1 2s151ms 2s151ms 20 2 15s557ms 7s778ms Jun 10 00 2 21s702ms 10s851ms 01 4 28s337ms 7s84ms 02 5 27s164ms 5s432ms 03 2 20s778ms 10s389ms 04 2 21s531ms 10s765ms 06 1 22s917ms 22s917ms 08 1 1s352ms 1s352ms 09 1 23s246ms 23s246ms 11 2 11s265ms 5s632ms 12 1 8s936ms 8s936ms 13 3 45s543ms 15s181ms 14 2 2s952ms 1s476ms 15 4 1m12s 18s113ms 16 1 1s400ms 1s400ms 17 1 10s524ms 10s524ms 18 1 1s503ms 1s503ms 19 3 48s326ms 16s108ms 20 3 21s770ms 7s256ms 21 3 33s4ms 11s1ms 22 4 24s264ms 6s66ms 23 9 1m19s 8s817ms Jun 11 00 3 36s194ms 12s64ms 01 2 10s844ms 5s422ms 02 2 33s768ms 16s884ms 03 4 55s147ms 13s786ms 04 10 1m41s 10s153ms 05 3 34s828ms 11s609ms 06 7 2m1s 17s318ms 07 3 23s58ms 7s686ms 08 10 1m42s 10s232ms 09 4 14s469ms 3s617ms 10 6 1m18s 13s22ms 11 8 1m15s 9s426ms 12 56 16m6s 17s250ms 13 6 1m5s 10s854ms 14 1 12s169ms 12s169ms 15 4 22s165ms 5s541ms 16 8 1m25s 10s669ms 17 7 1m37s 13s928ms 18 7 1m9s 9s990ms 19 2 11s964ms 5s982ms 20 4 1m14s 18s555ms 21 6 59s279ms 9s879ms 22 7 1m33s 13s405ms 23 6 36s622ms 6s103ms Jun 12 00 5 50s155ms 10s31ms 01 1 1s59ms 1s59ms 02 2 14s9ms 7s4ms 03 2 15s920ms 7s960ms 04 3 32s549ms 10s849ms 05 5 1m2s 12s558ms 06 4 51s615ms 12s903ms 07 8 1m 7s505ms 08 3 30s664ms 10s221ms 09 3 15s141ms 5s47ms 10 4 44s579ms 11s144ms 12 4 1m 15s240ms 13 4 7s908ms 1s977ms 14 3 40s988ms 13s662ms 15 3 20s507ms 6s835ms 17 3 49s348ms 16s449ms 19 5 50s582ms 10s116ms 20 10 1m52s 11s292ms 21 5 53s737ms 10s747ms 22 3 8s37ms 2s679ms 23 5 57s773ms 11s554ms Jun 13 00 4 40s175ms 10s43ms 01 5 56s138ms 11s227ms 02 6 1m17s 12s872ms 03 1 11s229ms 11s229ms Jun 14 20 1 4s36ms 4s36ms 21 5 31s643ms 6s328ms 22 3 24s639ms 8s213ms 23 5 36s8ms 7s201ms [ User: pubeu - Total duration: 12m36s - Times executed: 64 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1234207') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:39:53 Duration: 52s752ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1275834') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:38:59 Duration: 47s803ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1276161') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:39:22 Duration: 45s995ms Bind query: yes
9 1s 32s848ms 6s349ms 331 35m1s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where phenotypeterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and associatedterm.object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 08 00 3 24s769ms 8s256ms 01 2 18s768ms 9s384ms 02 3 22s196ms 7s398ms 03 4 11s788ms 2s947ms 04 5 6s222ms 1s244ms 05 2 2s249ms 1s124ms 06 4 22s586ms 5s646ms 09 7 21s353ms 3s50ms 10 2 20s333ms 10s166ms 11 3 23s297ms 7s765ms 12 1 1s309ms 1s309ms 13 3 9s47ms 3s15ms 14 1 1s162ms 1s162ms 15 3 8s393ms 2s797ms 16 3 18s127ms 6s42ms 17 2 6s99ms 3s49ms 18 3 24s475ms 8s158ms 19 3 35s50ms 11s683ms 20 3 32s661ms 10s887ms 21 5 40s514ms 8s102ms 22 8 51s148ms 6s393ms 23 2 16s152ms 8s76ms Jun 09 00 1 1s116ms 1s116ms 07 1 6s457ms 6s457ms 08 1 3s148ms 3s148ms 09 1 2s874ms 2s874ms 10 2 2s222ms 1s111ms 12 3 25s147ms 8s382ms 13 2 12s904ms 6s452ms 14 2 18s896ms 9s448ms 15 2 12s895ms 6s447ms 16 3 23s241ms 7s747ms 17 4 35s957ms 8s989ms 18 3 4s564ms 1s521ms 19 1 3s116ms 3s116ms 20 2 4s868ms 2s434ms 22 4 22s127ms 5s531ms 23 3 3s472ms 1s157ms Jun 10 00 3 17s380ms 5s793ms 01 1 3s691ms 3s691ms 02 1 16s917ms 16s917ms 03 3 39s478ms 13s159ms 04 3 7s397ms 2s465ms 07 1 1s91ms 1s91ms 10 2 19s450ms 9s725ms 11 1 1s170ms 1s170ms 12 2 18s153ms 9s76ms 13 1 17s567ms 17s567ms 15 2 2s198ms 1s99ms 16 2 35s362ms 17s681ms 17 2 18s412ms 9s206ms 19 1 1s124ms 1s124ms 20 2 2s278ms 1s139ms 22 2 19s483ms 9s741ms 23 5 22s652ms 4s530ms Jun 11 00 3 54s349ms 18s116ms 01 2 2s370ms 1s185ms 02 1 17s470ms 17s470ms 04 3 36s127ms 12s42ms 05 2 19s438ms 9s719ms 06 6 39s317ms 6s552ms 07 3 21s459ms 7s153ms 08 5 27s878ms 5s575ms 09 8 59s580ms 7s447ms 10 4 25s936ms 6s484ms 11 4 23s111ms 5s777ms 12 27 2m17s 5s102ms 13 4 39s268ms 9s817ms 14 2 35s774ms 17s887ms 15 3 21s732ms 7s244ms 16 3 22s17ms 7s339ms 17 3 5s714ms 1s904ms 18 6 57s1ms 9s500ms 19 2 2s258ms 1s129ms 20 4 22s517ms 5s629ms 21 6 23s846ms 3s974ms 22 7 1m 8s593ms 23 2 13s809ms 6s904ms Jun 12 00 5 22s562ms 4s512ms 01 3 22s204ms 7s401ms 02 4 22s287ms 5s571ms 03 8 1m9s 8s722ms 04 2 2s475ms 1s237ms 05 4 4s742ms 1s185ms 06 2 3s485ms 1s742ms 07 2 8s160ms 4s80ms 08 2 20s348ms 10s174ms 09 1 3s899ms 3s899ms 11 3 27s600ms 9s200ms 12 3 14s232ms 4s744ms 13 5 33s90ms 6s618ms 14 4 25s371ms 6s342ms 15 1 1s120ms 1s120ms 16 3 42s172ms 14s57ms 17 1 17s385ms 17s385ms 18 1 17s605ms 17s605ms 19 2 13s933ms 6s966ms 20 2 2s395ms 1s197ms 21 5 25s632ms 5s126ms 22 1 1s161ms 1s161ms 23 2 6s36ms 3s18ms Jun 13 00 3 31s643ms 10s547ms 01 5 10s769ms 2s153ms 02 2 18s974ms 9s487ms 03 1 4s926ms 4s926ms Jun 14 21 1 1s377ms 1s377ms 23 2 12s718ms 6s359ms [ User: pubeu - Total duration: 4m48s - Times executed: 43 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-08 22:24:57 Duration: 32s848ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:40:05 Duration: 29s238ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where phenotypeTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1234207'))) and associatedTerm.object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:25:41 Duration: 20s790ms Bind query: yes
10 4s148ms 20s233ms 4s759ms 761 1h21s select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 08 01 1 4s865ms 4s865ms 02 23 1m47s 4s679ms 03 23 1m51s 4s842ms 04 13 1m 4s666ms 09 2 10s54ms 5s27ms 10 11 50s612ms 4s601ms 13 1 4s389ms 4s389ms 15 2 8s934ms 4s467ms 21 1 12s87ms 12s87ms 22 1 16s31ms 16s31ms 23 2 15s996ms 7s998ms Jun 09 05 3 13s223ms 4s407ms 06 1 4s713ms 4s713ms 07 5 24s133ms 4s826ms 08 1 4s316ms 4s316ms 09 3 13s820ms 4s606ms 10 2 9s220ms 4s610ms 12 1 4s490ms 4s490ms 14 1 4s454ms 4s454ms 15 2 8s958ms 4s479ms 21 1 4s947ms 4s947ms 22 1 4s509ms 4s509ms 23 4 18s286ms 4s571ms Jun 10 01 3 30s409ms 10s136ms 02 2 8s834ms 4s417ms 03 2 8s443ms 4s221ms 04 2 8s618ms 4s309ms 05 2 8s898ms 4s449ms 06 3 13s293ms 4s431ms 07 2 11s374ms 5s687ms 08 3 13s501ms 4s500ms 09 3 13s809ms 4s603ms 10 6 27s115ms 4s519ms 11 25 1m54s 4s566ms 12 16 1m13s 4s624ms 13 9 40s969ms 4s552ms 14 34 2m34s 4s535ms 15 27 2m2s 4s543ms 16 7 35s920ms 5s131ms 17 1 4s683ms 4s683ms 22 1 4s413ms 4s413ms Jun 11 00 5 24s156ms 4s831ms 01 9 41s124ms 4s569ms 02 10 45s294ms 4s529ms 03 6 26s503ms 4s417ms 04 10 1m15s 7s561ms 05 25 1m52s 4s486ms 06 11 50s101ms 4s554ms 07 7 32s672ms 4s667ms 08 3 13s613ms 4s537ms 09 1 4s411ms 4s411ms 10 1 4s858ms 4s858ms 12 4 19s343ms 4s835ms 13 1 4s706ms 4s706ms 14 12 54s321ms 4s526ms 15 7 32s955ms 4s707ms 16 4 18s733ms 4s683ms 18 1 4s608ms 4s608ms 19 2 9s21ms 4s510ms 20 1 4s922ms 4s922ms 23 1 4s823ms 4s823ms Jun 12 01 3 14s560ms 4s853ms 02 51 4m3s 4s783ms 03 79 6m21s 4s833ms 04 5 23s806ms 4s761ms 05 1 5s155ms 5s155ms 06 2 8s971ms 4s485ms 07 44 3m27s 4s716ms 08 49 3m42s 4s534ms 09 55 4m13s 4s613ms 10 19 1m26s 4s546ms 11 5 22s988ms 4s597ms 12 16 1m20s 5s35ms 13 15 1m8s 4s555ms 14 15 1m13s 4s898ms 15 7 32s78ms 4s582ms 16 1 4s558ms 4s558ms 20 1 5s386ms 5s386ms 21 1 5s933ms 5s933ms 22 2 9s34ms 4s517ms 23 2 9s73ms 4s536ms Jun 13 00 3 13s981ms 4s660ms 01 2 9s164ms 4s582ms 02 3 13s681ms 4s560ms 03 1 4s419ms 4s419ms Jun 14 20 1 4s148ms 4s148ms 21 1 4s765ms 4s765ms 23 3 15s53ms 5s17ms [ User: pubeu - Total duration: 6m29s - Times executed: 76 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-11 04:10:46 Duration: 20s233ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-10 01:46:26 Duration: 19s276ms Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2025-06-11 04:10:53 Duration: 19s170ms Bind query: yes
11 1s4ms 27s377ms 4s242ms 1,305 1h32m17s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 08 00 19 1m27s 4s600ms 01 22 1m36s 4s407ms 02 22 1m38s 4s467ms 03 24 1m52s 4s671ms 04 21 1m33s 4s459ms 05 27 1m42s 3s806ms 06 23 1m27s 3s793ms 08 1 1s420ms 1s420ms 09 18 1m9s 3s878ms 10 9 36s242ms 4s26ms 11 2 9s190ms 4s595ms 13 1 1s183ms 1s183ms 14 1 1s28ms 1s28ms 15 1 1s70ms 1s70ms 16 1 7s312ms 7s312ms 17 1 9s116ms 9s116ms 18 1 1s464ms 1s464ms 19 1 13s892ms 13s892ms 20 1 4s926ms 4s926ms 21 2 2s119ms 1s59ms 22 4 29s453ms 7s363ms 23 5 13s571ms 2s714ms Jun 09 00 1 1s707ms 1s707ms 05 1 11s26ms 11s26ms 06 4 19s761ms 4s940ms 07 2 8s831ms 4s415ms 08 4 18s49ms 4s512ms 10 1 2s214ms 2s214ms 11 2 16s964ms 8s482ms 12 3 7s873ms 2s624ms 13 5 36s735ms 7s347ms 14 3 9s404ms 3s134ms 15 3 6s445ms 2s148ms 16 3 6s67ms 2s22ms 17 3 6s280ms 2s93ms 18 2 6s819ms 3s409ms 19 4 20s972ms 5s243ms 20 5 10s479ms 2s95ms 21 2 3s740ms 1s870ms 22 3 6s229ms 2s76ms 23 2 6s792ms 3s396ms Jun 10 00 5 34s479ms 6s895ms 01 2 9s708ms 4s854ms 02 11 58s851ms 5s350ms 03 2 15s270ms 7s635ms 04 3 16s3ms 5s334ms 05 7 28s53ms 4s7ms 06 1 1s413ms 1s413ms 07 2 4s434ms 2s217ms 08 4 14s235ms 3s558ms 09 5 23s741ms 4s748ms 10 5 21s558ms 4s311ms 11 7 31s785ms 4s540ms 12 5 15s771ms 3s154ms 13 7 30s995ms 4s427ms 14 7 39s187ms 5s598ms 15 9 38s56ms 4s228ms 16 10 35s186ms 3s518ms 17 11 32s286ms 2s935ms 18 5 34s624ms 6s924ms 19 18 1m25s 4s729ms 20 17 56s896ms 3s346ms 21 13 45s963ms 3s535ms 22 15 59s385ms 3s959ms 23 12 49s710ms 4s142ms Jun 11 00 11 48s504ms 4s409ms 01 15 59s204ms 3s946ms 02 10 51s90ms 5s109ms 03 11 38s578ms 3s507ms 04 4 29s599ms 7s399ms 05 9 33s508ms 3s723ms 06 8 31s153ms 3s894ms 07 23 1m33s 4s77ms 08 16 1m12s 4s536ms 09 14 49s901ms 3s564ms 10 29 2m3s 4s257ms 11 32 1m40s 3s133ms 12 140 14m16s 6s119ms 13 12 32s589ms 2s715ms 14 17 1m11s 4s211ms 15 7 34s646ms 4s949ms 16 17 59s538ms 3s502ms 17 21 1m7s 3s216ms 18 17 1m22s 4s845ms 19 18 1m2s 3s464ms 20 17 1m7s 3s972ms 21 24 1m56s 4s842ms 22 28 1m38s 3s535ms 23 17 1m9s 4s91ms Jun 12 00 15 50s672ms 3s378ms 01 16 59s413ms 3s713ms 02 14 1m3s 4s506ms 03 18 55s264ms 3s70ms 04 13 49s447ms 3s803ms 05 18 1m14s 4s113ms 06 4 23s895ms 5s973ms 07 7 21s205ms 3s29ms 08 15 44s639ms 2s975ms 09 15 53s559ms 3s570ms 10 19 1m 3s183ms 11 13 53s838ms 4s141ms 12 10 44s689ms 4s468ms 13 18 1m8s 3s819ms 14 20 1m44s 5s232ms 15 11 58s249ms 5s295ms 16 11 33s211ms 3s19ms 17 7 28s82ms 4s11ms 18 12 1m2s 5s173ms 19 6 18s804ms 3s134ms 20 15 46s395ms 3s93ms 21 10 22s800ms 2s280ms 22 4 15s583ms 3s895ms 23 9 26s873ms 2s985ms Jun 13 00 7 22s113ms 3s159ms 01 8 46s338ms 5s792ms 02 9 41s472ms 4s608ms 03 4 10s740ms 2s685ms Jun 14 20 1 6s835ms 6s835ms 21 5 20s132ms 4s26ms 22 3 9s977ms 3s325ms 23 8 19s63ms 2s382ms [ User: pubeu - Total duration: 12m54s - Times executed: 155 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2100109') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:39:43 Duration: 27s377ms Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2106936') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:38:50 Duration: 27s53ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2094859') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2025-06-11 12:35:27 Duration: 24s784ms Database: ctdprd51 User: pubeu Bind query: yes
12 1s 9s780ms 4s158ms 387 26m49s select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 08 00 3 12s462ms 4s154ms 02 2 11s807ms 5s903ms 04 1 6s536ms 6s536ms 05 16 52s803ms 3s300ms 06 7 32s936ms 4s705ms 08 6 6s730ms 1s121ms 09 2 11s461ms 5s730ms 10 1 1s278ms 1s278ms 11 2 9s933ms 4s966ms 12 1 4s849ms 4s849ms 13 2 5s746ms 2s873ms 15 3 14s875ms 4s958ms 16 1 4s875ms 4s875ms 18 1 4s860ms 4s860ms 21 2 17s934ms 8s967ms 22 3 27s887ms 9s295ms 23 1 7s128ms 7s128ms Jun 09 05 7 11s750ms 1s678ms 06 1 1s80ms 1s80ms 07 2 7s53ms 3s526ms 09 2 7s54ms 3s527ms 10 3 3s135ms 1s45ms 12 1 1s40ms 1s40ms 13 1 5s484ms 5s484ms 14 1 5s461ms 5s461ms 15 6 25s156ms 4s192ms 16 2 10s554ms 5s277ms 17 8 32s370ms 4s46ms 19 2 11s635ms 5s817ms 21 3 3s114ms 1s38ms 22 5 14s997ms 2s999ms Jun 10 00 5 14s438ms 2s887ms 01 2 7s173ms 3s586ms 02 1 6s79ms 6s79ms 03 5 27s661ms 5s532ms 04 7 29s511ms 4s215ms 05 15 43s979ms 2s931ms 06 3 11s381ms 3s793ms 08 1 5s341ms 5s341ms 09 1 1s76ms 1s76ms 10 7 27s171ms 3s881ms 11 13 52s560ms 4s43ms 20 11 49s474ms 4s497ms 21 7 31s490ms 4s498ms 23 3 18s371ms 6s123ms Jun 11 01 2 2s188ms 1s94ms 02 2 7s127ms 3s563ms 03 10 38s279ms 3s827ms 04 15 1m15s 5s20ms 05 13 38s431ms 2s956ms 06 2 11s772ms 5s886ms 07 17 1m16s 4s510ms 12 1 6s24ms 6s24ms 13 1 5s969ms 5s969ms 14 1 5s870ms 5s870ms 15 6 21s499ms 3s583ms 16 5 14s881ms 2s976ms 17 12 51s896ms 4s324ms 18 2 11s868ms 5s934ms 19 1 1s89ms 1s89ms 20 1 5s836ms 5s836ms 21 1 6s53ms 6s53ms 22 4 14s248ms 3s562ms 23 2 12s901ms 6s450ms Jun 12 00 1 1s227ms 1s227ms 01 4 20s905ms 5s226ms 03 1 6s269ms 6s269ms 04 6 40s745ms 6s790ms 05 7 12s891ms 1s841ms 06 4 23s490ms 5s872ms 08 2 12s114ms 6s57ms 09 1 6s277ms 6s277ms 12 19 1m26s 4s578ms 13 1 1s81ms 1s81ms 14 23 1m36s 4s190ms 16 1 1s74ms 1s74ms 18 1 1s81ms 1s81ms 19 2 13s216ms 6s608ms 21 2 7s705ms 3s852ms 23 7 35s60ms 5s8ms Jun 13 00 8 36s411ms 4s551ms 01 8 35s837ms 4s479ms Jun 14 20 3 10s104ms 3s368ms 21 1 1s 1s 22 5 29s735ms 5s947ms 23 3 22s238ms 7s412ms [ User: pubeu - Total duration: 2m54s - Times executed: 37 ]
[ User: qaeu - Total duration: 5s778ms - Times executed: 5 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1299718' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 22:43:48 Duration: 9s780ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1414209' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 21:20:28 Duration: 9s621ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1326390' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2025-06-08 22:17:57 Duration: 9s445ms Database: ctdprd51 User: pubeu Bind query: yes
13 1s 17s652ms 3s20ms 1,215 1h1m9s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where associatedterm.id = any (array (( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 08 00 15 48s119ms 3s207ms 01 8 16s334ms 2s41ms 02 18 59s153ms 3s286ms 03 16 38s789ms 2s424ms 04 17 58s257ms 3s426ms 05 35 1m36s 2s751ms 06 22 1m7s 3s68ms 08 1 1s44ms 1s44ms 09 5 10s761ms 2s152ms 10 12 37s301ms 3s108ms 11 10 38s105ms 3s810ms 12 9 30s749ms 3s416ms 13 9 37s357ms 4s150ms 14 15 57s936ms 3s862ms 15 7 20s685ms 2s955ms 16 9 27s774ms 3s86ms 17 4 12s800ms 3s200ms 18 6 17s289ms 2s881ms 19 10 26s200ms 2s620ms 20 9 32s103ms 3s567ms 21 15 54s757ms 3s650ms 22 7 29s543ms 4s220ms 23 5 14s273ms 2s854ms Jun 09 00 1 2s336ms 2s336ms 06 5 14s391ms 2s878ms 07 7 23s267ms 3s323ms 08 5 12s682ms 2s536ms 09 2 4s315ms 2s157ms 10 4 7s932ms 1s983ms 11 7 24s585ms 3s512ms 12 5 21s585ms 4s317ms 13 11 34s127ms 3s102ms 14 12 45s259ms 3s771ms 15 22 1m9s 3s144ms 16 9 33s33ms 3s670ms 17 23 1m22s 3s566ms 18 8 23s245ms 2s905ms 19 15 38s50ms 2s536ms 20 4 9s454ms 2s363ms 22 1 2s268ms 2s268ms 23 6 26s322ms 4s387ms Jun 10 00 7 24s684ms 3s526ms 01 12 39s540ms 3s295ms 02 11 45s590ms 4s144ms 03 5 11s84ms 2s216ms 04 14 36s338ms 2s595ms 05 22 1m2s 2s828ms 06 3 5s401ms 1s800ms 07 2 2s928ms 1s464ms 09 1 6s779ms 6s779ms 10 11 32s652ms 2s968ms 11 22 1m 2s735ms 12 3 4s819ms 1s606ms 13 1 1s525ms 1s525ms 15 3 9s913ms 3s304ms 16 2 2s836ms 1s418ms 17 3 6s831ms 2s277ms 18 1 3s439ms 3s439ms 19 6 17s372ms 2s895ms 20 21 56s270ms 2s679ms 21 15 37s60ms 2s470ms 22 3 5s981ms 1s993ms 23 1 1s23ms 1s23ms Jun 11 00 4 10s326ms 2s581ms 01 5 20s792ms 4s158ms 02 9 19s301ms 2s144ms 03 17 46s810ms 2s753ms 04 18 45s512ms 2s528ms 05 16 36s674ms 2s292ms 06 2 9s261ms 4s630ms 07 34 1m29s 2s642ms 08 5 24s817ms 4s963ms 09 8 17s283ms 2s160ms 10 5 20s700ms 4s140ms 11 8 21s983ms 2s747ms 12 50 2m19s 2s796ms 13 11 33s142ms 3s12ms 14 9 32s495ms 3s610ms 15 14 50s78ms 3s577ms 16 16 39s495ms 2s468ms 17 31 1m23s 2s685ms 18 7 26s749ms 3s821ms 19 2 4s689ms 2s344ms 20 8 19s10ms 2s376ms 21 10 47s480ms 4s748ms 22 6 12s910ms 2s151ms 23 5 19s538ms 3s907ms Jun 12 00 11 32s896ms 2s990ms 01 4 12s915ms 3s228ms 02 7 14s820ms 2s117ms 03 9 31s822ms 3s535ms 04 5 10s299ms 2s59ms 05 11 32s233ms 2s930ms 06 4 10s343ms 2s585ms 07 7 18s977ms 2s711ms 08 7 23s594ms 3s370ms 09 7 18s785ms 2s683ms 10 11 31s670ms 2s879ms 11 10 45s26ms 4s502ms 12 35 1m35s 2s720ms 13 8 25s360ms 3s170ms 14 42 2m1s 2s881ms 15 8 29s253ms 3s656ms 16 3 9s577ms 3s192ms 17 6 14s500ms 2s416ms 18 4 14s119ms 3s529ms 19 7 30s614ms 4s373ms 20 6 20s307ms 3s384ms 21 13 51s367ms 3s951ms 22 7 19s452ms 2s778ms 23 19 56s355ms 2s966ms Jun 13 00 22 53s907ms 2s450ms 01 18 56s188ms 3s121ms 02 4 12s136ms 3s34ms 03 3 7s 2s333ms Jun 14 20 9 42s384ms 4s709ms 21 11 33s59ms 3s5ms 22 9 21s218ms 2s357ms 23 8 19s585ms 2s448ms [ User: pubeu - Total duration: 9m1s - Times executed: 169 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1279518'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-14 20:13:02 Duration: 17s652ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1451245'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:38:33 Duration: 11s321ms Database: ctdprd51 User: pubeu Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where associatedTerm.id = ANY (ARRAY (( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566'))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:35:07 Duration: 10s937ms Bind query: yes
14 1s 17s726ms 2s957ms 549 27m3s select * from ( select g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, count(*) over () fullrowcount from term g where g.id in ( select gt.gene_id from dag_path dp inner join gene_taxon gt on dp.descendant_object_id = gt.taxon_id where dp.ancestor_object_id = ? union all select gcr.gene_id from dag_path dp inner join gene_chem_reference gcr on dp.descendant_object_id = gcr.taxon_id where dp.ancestor_object_id = ?) offset ?) mq order by mq.genesymbolsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 08 00 3 7s87ms 2s362ms 01 1 1s859ms 1s859ms 02 6 17s783ms 2s963ms 03 10 31s344ms 3s134ms 04 4 16s370ms 4s92ms 05 2 4s158ms 2s79ms 06 4 17s850ms 4s462ms 09 4 13s550ms 3s387ms 10 5 13s123ms 2s624ms 11 3 9s971ms 3s323ms 12 8 28s421ms 3s552ms 13 1 3s868ms 3s868ms 14 10 21s441ms 2s144ms 15 7 17s53ms 2s436ms 16 1 2s869ms 2s869ms 17 3 7s208ms 2s402ms 18 3 5s16ms 1s672ms 19 6 13s604ms 2s267ms 20 9 24s678ms 2s742ms 21 7 20s40ms 2s862ms 22 76 4m8s 3s270ms 23 39 1m39s 2s554ms Jun 09 00 1 1s736ms 1s736ms 06 5 12s133ms 2s426ms 07 5 7s596ms 1s519ms 08 1 1s14ms 1s14ms 09 4 6s571ms 1s642ms 10 1 3s312ms 3s312ms 11 3 3s636ms 1s212ms 12 10 17s748ms 1s774ms 13 11 16s349ms 1s486ms 14 3 10s123ms 3s374ms 15 1 1s328ms 1s328ms 16 6 13s82ms 2s180ms 17 7 13s551ms 1s935ms 18 10 17s868ms 1s786ms 19 1 1s22ms 1s22ms 21 6 21s659ms 3s609ms 22 5 12s121ms 2s424ms 23 9 10s33ms 1s114ms Jun 10 00 12 14s728ms 1s227ms 01 7 14s375ms 2s53ms 02 7 20s16ms 2s859ms 03 7 14s767ms 2s109ms 04 3 5s597ms 1s865ms 05 1 2s874ms 2s874ms 06 19 1m51s 5s859ms 07 1 1s52ms 1s52ms 08 1 1s25ms 1s25ms 09 1 1s5ms 1s5ms 10 1 1s23ms 1s23ms 11 2 2s721ms 1s360ms 12 1 1s459ms 1s459ms 13 4 9s715ms 2s428ms 15 1 2s805ms 2s805ms 16 4 12s672ms 3s168ms 17 3 16s965ms 5s655ms 18 1 1s181ms 1s181ms 19 3 8s936ms 2s978ms 20 1 1s63ms 1s63ms 22 1 1s50ms 1s50ms 23 2 13s229ms 6s614ms Jun 11 00 3 9s3ms 3s1ms 02 11 36s89ms 3s280ms 03 1 1s25ms 1s25ms 04 15 1m13s 4s908ms 08 1 1s153ms 1s153ms 09 2 2s101ms 1s50ms 10 5 19s141ms 3s828ms 11 4 16s793ms 4s198ms 12 43 2m37s 3s661ms 13 3 7s405ms 2s468ms 14 2 12s677ms 6s338ms 16 2 5s316ms 2s658ms 17 6 18s671ms 3s111ms 18 2 10s359ms 5s179ms 19 3 6s894ms 2s298ms 21 2 8s186ms 4s93ms 22 4 17s280ms 4s320ms 23 4 16s722ms 4s180ms Jun 12 03 2 9s427ms 4s713ms 04 1 6s802ms 6s802ms 05 3 4s405ms 1s468ms 06 2 12s569ms 6s284ms 09 2 2s823ms 1s411ms 10 2 2s70ms 1s35ms 11 2 8s575ms 4s287ms 13 1 2s853ms 2s853ms 15 1 1s29ms 1s29ms 17 2 2s541ms 1s270ms 18 1 2s375ms 2s375ms 19 1 6s449ms 6s449ms 20 3 6s671ms 2s223ms 21 13 35s238ms 2s710ms 22 2 3s424ms 1s712ms 23 2 5s537ms 2s768ms Jun 13 01 1 6s202ms 6s202ms 02 1 3s962ms 3s962ms 03 1 1s595ms 1s595ms Jun 14 20 1 2s324ms 2s324ms 21 4 9s767ms 2s441ms 23 4 11s271ms 2s817ms [ User: pubeu - Total duration: 9m42s - Times executed: 178 ]
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '660706' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '660706') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-11 12:38:43 Duration: 17s726ms Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '743517' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '743517') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 11s579ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = '924770' UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = '924770') OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50;
Date: 2025-06-10 06:15:24 Duration: 9s738ms Database: ctdprd51 User: pubeu Bind query: yes
15 1s1ms 10s558ms 2s592ms 389 16m48s select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.ixn_id = any (array (( select ixn_id from ixn_anatomy where anatomy_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?)))) and ptr.term_object_type_id = ? group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 08 00 9 19s380ms 2s153ms 01 9 25s854ms 2s872ms 02 4 5s345ms 1s336ms 03 9 19s814ms 2s201ms 04 2 3s238ms 1s619ms 05 3 10s150ms 3s383ms 06 7 11s889ms 1s698ms 08 1 1s46ms 1s46ms 09 7 16s495ms 2s356ms 10 5 13s96ms 2s619ms Jun 09 19 1 1s493ms 1s493ms 22 1 1s330ms 1s330ms Jun 10 03 1 1s142ms 1s142ms 04 1 1s493ms 1s493ms 07 1 1s620ms 1s620ms 09 1 1s262ms 1s262ms 10 1 1s588ms 1s588ms 11 1 1s520ms 1s520ms 12 5 26s920ms 5s384ms 13 4 17s937ms 4s484ms 14 1 1s12ms 1s12ms 15 2 9s338ms 4s669ms 16 2 9s781ms 4s890ms 17 5 20s516ms 4s103ms 18 3 11s253ms 3s751ms 19 6 22s17ms 3s669ms 20 7 17s788ms 2s541ms 21 2 3s327ms 1s663ms 22 6 16s90ms 2s681ms 23 4 12s206ms 3s51ms Jun 11 00 5 19s959ms 3s991ms 01 7 17s470ms 2s495ms 02 3 5s84ms 1s694ms 03 7 16s60ms 2s294ms 04 4 11s464ms 2s866ms 05 7 11s161ms 1s594ms 06 1 7s787ms 7s787ms 07 4 5s580ms 1s395ms 08 2 2s283ms 1s141ms 09 5 6s505ms 1s301ms 10 17 44s130ms 2s595ms 11 20 49s129ms 2s456ms 12 45 1m44s 2s325ms 13 4 7s6ms 1s751ms 14 4 5s616ms 1s404ms 15 6 15s668ms 2s611ms 16 8 18s389ms 2s298ms 17 2 2s912ms 1s456ms 18 7 18s917ms 2s702ms 19 10 22s132ms 2s213ms 20 4 12s864ms 3s216ms 21 8 11s299ms 1s412ms 22 3 10s784ms 3s594ms 23 7 37s489ms 5s355ms Jun 12 00 6 15s689ms 2s614ms 01 2 3s28ms 1s514ms 02 4 4s954ms 1s238ms 03 6 16s703ms 2s783ms 04 6 9s680ms 1s613ms 05 3 5s142ms 1s714ms 06 2 8s953ms 4s476ms 07 1 1s11ms 1s11ms 08 5 13s401ms 2s680ms 09 7 22s864ms 3s266ms 10 1 1s650ms 1s650ms 11 4 6s323ms 1s580ms 12 5 6s773ms 1s354ms 13 3 10s422ms 3s474ms 14 5 13s151ms 2s630ms 15 5 7s620ms 1s524ms 16 2 3s160ms 1s580ms 17 2 9s396ms 4s698ms 18 1 7s851ms 7s851ms 19 2 9s192ms 4s596ms 20 5 19s909ms 3s981ms 21 1 1s712ms 1s712ms 22 3 10s686ms 3s562ms 23 2 9s301ms 4s650ms Jun 13 00 1 7s802ms 7s802ms 01 1 1s43ms 1s43ms 02 1 7s832ms 7s832ms 03 1 1s719ms 1s719ms Jun 14 22 1 1s178ms 1s178ms [ User: pubeu - Total duration: 1m40s - Times executed: 38 ]
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2111710')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 18:41:29 Duration: 10s558ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2111710')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:34:56 Duration: 9s168ms Bind query: yes
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select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.ixn_id = ANY (ARRAY (( select ixn_id from ixn_anatomy where anatomy_id in ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2111710')))) and ptr.term_object_type_id = 2 group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort LIMIT 50;
Date: 2025-06-11 12:32:48 Duration: 9s103ms Database: ctdprd51 User: pubeu Bind query: yes
16 1s 20s534ms 2s464ms 1,168 47m58s select e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, ( select string_agg(distinct stressorterm.nm || ? || ( select cd from object_type where id = stressorterm.object_type_id) || ? || stressorterm.nm_html || ? || stressorterm.acc_txt || ? || stressorterm.acc_db_cd, ?)) as stressoragents, ( select string_agg(distinct coalesce(receptorterm.nm, ?) || ? || coalesce(( select cd from object_type where id = receptorterm.object_type_id), ?) || ? || coalesce(receptorterm.nm_html, ?) || ? || coalesce(receptorterm.acc_txt, ?) || ? || coalesce(receptorterm.acc_db_cd, ?) || ? || receptor.description, ?)) as receptors, ( select string_agg(distinct country.nm, ?)) as studycountries, ( select string_agg(distinct location.locality_txt, ?)) as localities, ( select string_agg(distinct event.medium_nm || ? || coalesce(event.medium_term_acc_txt, ?), ?)) as assaymediums, ( select string_agg(distinct exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd, ?)) as assayedmarkers, ( select string_agg(distinct diseaseterm.nm || ? || ( select cd from object_type where id = diseaseterm.object_type_id) || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd, ?)) as diseases, ( select string_agg(distinct phenotypeterm.nm || ? || ( select cd from object_type where id = phenotypeterm.object_type_id) || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd, ?)) as phenotypes, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, re.author_summary summary, count(*) over () fullrowcount from exposure e inner join reference r on e.reference_id = r.id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join term receptorterm on receptor.term_id = receptorterm.id left outer join exp_event event on e.exp_event_id = event.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join exp_event_location location on e.exp_event_id = location.exp_event_id left outer join country on location.country_id = country.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id inner join reference_exp re on e.reference_id = re.reference_id left outer join exp_study_factor expstudyfactor on re.id = expstudyfactor.reference_exp_id where e.reference_id = any (array ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ?) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressoragents limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 08 00 17 39s498ms 2s323ms 01 10 21s258ms 2s125ms 02 10 34s170ms 3s417ms 03 11 30s956ms 2s814ms 04 10 21s843ms 2s184ms 05 33 1m15s 2s286ms 06 30 1m12s 2s418ms 08 2 5s668ms 2s834ms 09 6 12s159ms 2s26ms 10 12 26s648ms 2s220ms 11 11 25s145ms 2s285ms 12 11 22s847ms 2s77ms 13 10 23s326ms 2s332ms 14 7 15s198ms 2s171ms 15 13 34s529ms 2s656ms 16 8 24s43ms 3s5ms 17 3 10s708ms 3s569ms 18 5 13s576ms 2s715ms 19 6 15s756ms 2s626ms 20 11 28s217ms 2s565ms 21 13 37s257ms 2s865ms 22 10 1m2s 6s291ms 23 8 21s665ms 2s708ms Jun 09 00 1 2s148ms 2s148ms 06 1 4s565ms 4s565ms 07 6 16s767ms 2s794ms 08 7 16s836ms 2s405ms 09 4 15s386ms 3s846ms 10 3 6s500ms 2s166ms 11 4 9s971ms 2s492ms 12 6 15s85ms 2s514ms 13 12 18s484ms 1s540ms 14 8 14s523ms 1s815ms 15 19 42s727ms 2s248ms 16 8 24s296ms 3s37ms 17 28 1m12s 2s606ms 18 6 16s67ms 2s677ms 19 14 43s147ms 3s81ms 20 4 7s947ms 1s986ms 22 2 2s291ms 1s145ms 23 8 22s498ms 2s812ms Jun 10 00 10 25s13ms 2s501ms 01 8 23s591ms 2s948ms 02 7 17s623ms 2s517ms 03 5 10s346ms 2s69ms 04 14 31s753ms 2s268ms 05 19 47s324ms 2s490ms 06 3 3s505ms 1s168ms 07 2 5s246ms 2s623ms 09 2 4s192ms 2s96ms 10 10 22s256ms 2s225ms 11 21 47s725ms 2s272ms 13 2 5s918ms 2s959ms 14 4 11s921ms 2s980ms 15 6 13s628ms 2s271ms 16 3 8s965ms 2s988ms 17 2 8s741ms 4s370ms 18 1 3s164ms 3s164ms 19 5 14s670ms 2s934ms 20 22 57s976ms 2s635ms 21 15 30s873ms 2s58ms 22 1 1s134ms 1s134ms 23 7 9s458ms 1s351ms Jun 11 00 3 10s112ms 3s370ms 01 3 9s100ms 3s33ms 02 5 15s710ms 3s142ms 03 15 35s350ms 2s356ms 04 24 53s65ms 2s211ms 05 14 32s987ms 2s356ms 06 7 15s30ms 2s147ms 07 33 1m9s 2s106ms 08 6 9s575ms 1s595ms 09 11 22s789ms 2s71ms 10 8 19s863ms 2s482ms 11 12 24s465ms 2s38ms 12 50 2m20s 2s806ms 13 10 22s146ms 2s214ms 14 6 15s74ms 2s512ms 15 9 19s554ms 2s172ms 16 13 32s24ms 2s463ms 17 31 1m11s 2s311ms 18 7 16s248ms 2s321ms 19 16 40s9ms 2s500ms 20 9 17s75ms 1s897ms 21 12 26s665ms 2s222ms 22 9 19s811ms 2s201ms 23 5 5s912ms 1s182ms Jun 12 00 5 15s751ms 3s150ms 01 10 24s51ms 2s405ms 02 5 16s116ms 3s223ms 03 6 18s652ms 3s108ms 04 7 13s412ms 1s916ms 05 6 16s324ms 2s720ms 06 9 19s449ms 2s161ms 07 5 11s407ms 2s281ms 08 3 5s466ms 1s822ms 09 8 15s757ms 1s969ms 10 6 11s405ms 1s900ms 11 10 23s918ms 2s391ms 12 31 1m13s 2s356ms 13 3 9s787ms 3s262ms 14 41 1m33s 2s274ms 15 3 7s23ms 2s341ms 16 5 17s330ms 3s466ms 17 5 12s776ms 2s555ms 18 4 15s408ms 3s852ms 19 6 11s296ms 1s882ms 20 7 17s867ms 2s552ms 21 7 18s485ms 2s640ms 22 4 9s734ms 2s433ms 23 13 36s207ms 2s785ms Jun 13 00 20 53s734ms 2s686ms 01 15 32s926ms 2s195ms 02 5 11s907ms 2s381ms 03 2 8s703ms 4s351ms Jun 14 20 1 4s472ms 4s472ms 21 11 34s200ms 3s109ms 22 10 20s23ms 2s2ms 23 10 21s923ms 2s192ms [ User: pubeu - Total duration: 6m30s - Times executed: 149 ]
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-11 12:38:47 Duration: 20s534ms Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1411566') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-08 22:25:40 Duration: 15s105ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1449732') and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1449732') and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%') and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-08 22:33:43 Duration: 11s277ms Bind query: yes
17 1s7ms 4s140ms 1s810ms 315 9m30s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where diseaseterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 08 00 5 8s437ms 1s687ms 01 6 8s278ms 1s379ms 02 3 6s758ms 2s252ms 03 5 7s772ms 1s554ms 04 6 11s30ms 1s838ms 05 6 11s624ms 1s937ms 06 5 11s756ms 2s351ms 10 5 11s178ms 2s235ms 11 2 2s798ms 1s399ms 15 1 2s311ms 2s311ms 16 1 1s12ms 1s12ms 18 1 2s400ms 2s400ms 19 1 2s462ms 2s462ms 21 1 1s287ms 1s287ms 23 2 3s37ms 1s518ms Jun 09 05 1 1s108ms 1s108ms 11 1 1s198ms 1s198ms 12 1 1s816ms 1s816ms 13 1 1s90ms 1s90ms 14 1 1s731ms 1s731ms 22 1 1s688ms 1s688ms Jun 10 03 1 1s313ms 1s313ms 04 2 4s551ms 2s275ms 09 1 1s66ms 1s66ms 11 3 3s899ms 1s299ms 12 3 5s437ms 1s812ms 13 2 3s569ms 1s784ms 15 5 7s848ms 1s569ms 16 1 1s205ms 1s205ms 17 1 1s144ms 1s144ms 18 2 2s784ms 1s392ms 19 1 1s348ms 1s348ms 20 3 4s10ms 1s336ms 21 3 6s139ms 2s46ms 22 3 5s380ms 1s793ms 23 2 4s113ms 2s56ms Jun 11 00 2 2s299ms 1s149ms 01 2 2s770ms 1s385ms 02 4 8s710ms 2s177ms 03 3 4s651ms 1s550ms 04 1 2s493ms 2s493ms 06 1 1s893ms 1s893ms 07 3 5s309ms 1s769ms 08 4 8s209ms 2s52ms 09 4 9s64ms 2s266ms 10 5 9s354ms 1s870ms 11 12 25s280ms 2s106ms 12 61 1m55s 1s888ms 13 3 4s597ms 1s532ms 14 7 11s517ms 1s645ms 15 3 5s501ms 1s833ms 16 7 9s592ms 1s370ms 17 5 7s805ms 1s561ms 18 6 10s556ms 1s759ms 19 4 5s903ms 1s475ms 20 4 7s877ms 1s969ms 21 7 14s88ms 2s12ms 22 4 5s219ms 1s304ms 23 3 5s309ms 1s769ms Jun 12 00 4 8s775ms 2s193ms 01 1 3s152ms 3s152ms 02 1 2s903ms 2s903ms 03 1 1s376ms 1s376ms 04 4 7s315ms 1s828ms 05 7 14s715ms 2s102ms 06 2 4s408ms 2s204ms 07 3 5s37ms 1s679ms 08 3 4s323ms 1s441ms 09 3 5s160ms 1s720ms 10 2 2s359ms 1s179ms 11 3 3s415ms 1s138ms 13 3 6s392ms 2s130ms 14 3 4s600ms 1s533ms 16 1 2s828ms 2s828ms 17 1 1s592ms 1s592ms 18 3 4s533ms 1s511ms 19 5 11s229ms 2s245ms 20 1 1s392ms 1s392ms 21 4 7s523ms 1s880ms 23 2 2s971ms 1s485ms Jun 13 00 3 4s248ms 1s416ms 01 4 8s670ms 2s167ms 02 1 1s795ms 1s795ms 03 2 4s161ms 2s80ms Jun 14 20 2 3s828ms 1s914ms 22 1 2s701ms 2s701ms 23 1 1s42ms 1s42ms [ User: pubeu - Total duration: 1m5s - Times executed: 34 ]
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2100109') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:39:26 Duration: 4s140ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2094859') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-08 06:12:02 Duration: 3s671ms Bind query: yes
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SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE diseaseTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '2099635') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2025-06-11 12:37:35 Duration: 3s483ms Bind query: yes
18 1s49ms 4s645ms 1s651ms 419 11m32s select c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposurereferencecount, case when cd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from chem_disease_axn a where a.chem_id = cd.chem_id and a.disease_id = cd.disease_id) else null end actiontypes from chem_disease cd inner join term c on cd.chem_id = c.id inner join term d on cd.disease_id = d.id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, cd.network_score desc nulls last, d.nm_sort, c.nm_sort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 08 00 9 16s72ms 1s785ms 01 4 6s509ms 1s627ms 02 4 5s928ms 1s482ms 03 3 4s98ms 1s366ms 04 4 7s221ms 1s805ms 05 11 17s400ms 1s581ms 06 6 10s786ms 1s797ms 09 4 7s361ms 1s840ms 10 4 6s388ms 1s597ms 11 3 4s513ms 1s504ms 12 1 1s816ms 1s816ms 13 4 6s794ms 1s698ms 14 4 6s852ms 1s713ms 15 4 6s877ms 1s719ms 16 4 7s553ms 1s888ms 17 3 4s463ms 1s487ms 18 3 4s421ms 1s473ms 19 4 5s129ms 1s282ms 20 5 8s608ms 1s721ms 21 4 7s811ms 1s952ms 22 10 14s533ms 1s453ms 23 4 8s35ms 2s8ms Jun 09 00 1 1s900ms 1s900ms 06 5 8s102ms 1s620ms 07 3 4s441ms 1s480ms 08 1 1s943ms 1s943ms 11 1 1s274ms 1s274ms 12 3 4s545ms 1s515ms 13 2 2s618ms 1s309ms 14 5 7s79ms 1s415ms 15 7 10s816ms 1s545ms 16 5 7s610ms 1s522ms 17 7 12s38ms 1s719ms 18 5 7s145ms 1s429ms 19 5 8s732ms 1s746ms 20 2 3s206ms 1s603ms 23 4 6s363ms 1s590ms Jun 10 00 4 6s938ms 1s734ms 01 7 10s832ms 1s547ms 02 1 1s272ms 1s272ms 03 1 1s872ms 1s872ms 04 2 3s172ms 1s586ms 05 5 8s90ms 1s618ms 09 1 1s892ms 1s892ms 10 2 3s265ms 1s632ms 11 5 8s287ms 1s657ms 12 2 3s204ms 1s602ms 15 2 3s845ms 1s922ms 16 1 1s284ms 1s284ms 17 2 3s240ms 1s620ms 18 1 1s908ms 1s908ms 20 5 7s830ms 1s566ms 21 2 3s227ms 1s613ms 22 2 2s724ms 1s362ms Jun 11 00 2 2s621ms 1s310ms 01 2 3s238ms 1s619ms 03 6 9s489ms 1s581ms 04 5 8s323ms 1s664ms 05 5 7s906ms 1s581ms 06 1 1s914ms 1s914ms 07 6 9s788ms 1s631ms 08 1 1s342ms 1s342ms 09 4 6s569ms 1s642ms 10 3 5s166ms 1s722ms 11 6 9s150ms 1s525ms 12 25 44s311ms 1s772ms 13 2 2s699ms 1s349ms 14 3 4s327ms 1s442ms 15 3 4s675ms 1s558ms 16 4 6s520ms 1s630ms 17 9 17s272ms 1s919ms 18 5 7s884ms 1s576ms 19 1 1s977ms 1s977ms 20 5 9s106ms 1s821ms 21 3 5s284ms 1s761ms 22 1 1s347ms 1s347ms 23 4 7s761ms 1s940ms Jun 12 00 7 11s128ms 1s589ms 01 2 4s39ms 2s19ms 02 3 5s886ms 1s962ms 03 2 2s832ms 1s416ms 04 2 3s770ms 1s885ms 05 7 11s516ms 1s645ms 06 3 5s116ms 1s705ms 08 5 8s778ms 1s755ms 09 1 1s997ms 1s997ms 10 3 5s820ms 1s940ms 11 3 4s583ms 1s527ms 12 8 13s321ms 1s665ms 13 2 3s292ms 1s646ms 14 6 9s923ms 1s653ms 15 2 3s291ms 1s645ms 17 5 7s853ms 1s570ms 19 2 3s380ms 1s690ms 20 5 8s626ms 1s725ms 22 2 3s236ms 1s618ms 23 7 11s662ms 1s666ms Jun 13 00 4 7s51ms 1s762ms 01 8 14s416ms 1s802ms 02 3 3s933ms 1s311ms 03 1 1s330ms 1s330ms Jun 14 20 2 3s125ms 1s562ms 21 6 9s555ms 1s592ms 22 8 12s712ms 1s589ms 23 1 1s339ms 1s339ms [ User: pubeu - Total duration: 1m37s - Times executed: 56 ]
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-06-11 12:38:34 Duration: 4s645ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-06-11 17:10:29 Duration: 4s119ms Bind query: yes
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SELECT /* ChemDiseaseAssnsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemid, d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, cd.network_score networkscore, cd.indirect_gene_qty inferredcount, cd.reference_qty referencecount, cd.exposure_reference_qty exposureReferenceCount, CASE WHEN cd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_axn a WHERE a.chem_id = cd.chem_id AND a.disease_id = cd.disease_id) ELSE NULL END actiontypes FROM chem_disease cd INNER JOIN term c ON cd.chem_id = c.id INNER JOIN term d ON cd.disease_id = d.id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1411566') ORDER BY actionTypes, cd.network_score DESC NULLS LAST, d.nm_sort, c.nm_sort LIMIT 50;
Date: 2025-06-08 22:08:30 Duration: 3s149ms Database: ctdprd51 User: pubeu Bind query: yes
19 1s407ms 2s206ms 1s625ms 383 10m22s select t.nm;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 08 00 6 9s471ms 1s578ms 01 15 23s465ms 1s564ms 02 12 18s906ms 1s575ms 03 4 6s67ms 1s516ms 04 13 19s907ms 1s531ms 05 3 4s493ms 1s497ms 06 5 8s456ms 1s691ms 08 1 2s206ms 2s206ms 09 4 6s170ms 1s542ms 10 1 1s587ms 1s587ms Jun 09 12 1 1s638ms 1s638ms 18 1 1s665ms 1s665ms 20 1 1s637ms 1s637ms Jun 10 02 1 1s668ms 1s668ms 05 1 1s664ms 1s664ms 09 2 3s334ms 1s667ms 10 1 1s454ms 1s454ms 12 2 3s130ms 1s565ms 13 2 3s245ms 1s622ms 14 5 8s63ms 1s612ms 15 5 7s851ms 1s570ms 16 4 6s489ms 1s622ms 17 7 10s785ms 1s540ms 18 4 6s347ms 1s586ms 19 5 7s879ms 1s575ms 20 7 11s208ms 1s601ms 21 3 4s875ms 1s625ms 22 11 17s616ms 1s601ms 23 11 17s921ms 1s629ms Jun 11 00 7 11s713ms 1s673ms 01 13 20s582ms 1s583ms 02 4 6s161ms 1s540ms 03 1 1s648ms 1s648ms 04 2 3s210ms 1s605ms 05 1 1s609ms 1s609ms 06 3 4s666ms 1s555ms 07 3 4s769ms 1s589ms 08 4 6s449ms 1s612ms 09 5 7s877ms 1s575ms 10 4 6s264ms 1s566ms 11 6 9s409ms 1s568ms 12 4 6s481ms 1s620ms 13 8 13s238ms 1s654ms 14 4 6s495ms 1s623ms 15 2 3s282ms 1s641ms 16 5 7s965ms 1s593ms 17 5 7s960ms 1s592ms 18 7 11s514ms 1s644ms 19 5 8s81ms 1s616ms 20 4 6s496ms 1s624ms 21 13 20s863ms 1s604ms 22 6 9s810ms 1s635ms 23 7 11s639ms 1s662ms Jun 12 00 9 14s945ms 1s660ms 01 2 3s256ms 1s628ms 02 4 6s615ms 1s653ms 03 3 5s450ms 1s816ms 04 3 5s319ms 1s773ms 05 7 11s901ms 1s700ms 06 2 3s440ms 1s720ms 07 2 3s479ms 1s739ms 08 4 6s339ms 1s584ms 09 1 1s666ms 1s666ms 10 6 9s717ms 1s619ms 11 6 9s881ms 1s646ms 12 3 4s869ms 1s623ms 13 9 15s207ms 1s689ms 14 6 10s57ms 1s676ms 15 7 11s863ms 1s694ms 16 5 8s508ms 1s701ms 17 8 13s462ms 1s682ms 18 2 3s540ms 1s770ms 19 4 6s397ms 1s599ms 20 6 10s419ms 1s736ms 21 7 12s136ms 1s733ms 22 1 1s789ms 1s789ms 23 1 1s652ms 1s652ms Jun 13 00 3 5s62ms 1s687ms 01 6 10s144ms 1s690ms 02 2 3s417ms 1s708ms 03 3 4s707ms 1s569ms [ User: pubeu - Total duration: 40s571ms - Times executed: 25 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm;
Date: 2025-06-08 08:52:46 Duration: 2s206ms Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm;
Date: 2025-06-08 06:41:05 Duration: 2s178ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm;
Date: 2025-06-11 00:01:55 Duration: 2s170ms Bind query: yes
20 1s317ms 3s374ms 1s613ms 8,922 3h59m53s select ;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 08 00 198 5m18s 1s607ms 01 200 5m18s 1s591ms 02 242 6m27s 1s602ms 03 196 5m8s 1s575ms 04 228 5m57s 1s567ms 05 170 4m26s 1s567ms 06 169 4m26s 1s577ms 08 16 25s308ms 1s581ms 09 176 4m32s 1s546ms 10 98 2m29s 1s524ms Jun 09 14 1 1s530ms 1s530ms 15 1 1s529ms 1s529ms 16 11 17s78ms 1s552ms 17 5 8s55ms 1s611ms 18 2 3s244ms 1s622ms 19 9 14s305ms 1s589ms 20 3 5s90ms 1s696ms 21 1 1s663ms 1s663ms 22 9 13s946ms 1s549ms 23 3 4s947ms 1s649ms Jun 10 00 3 4s927ms 1s642ms 02 1 1s827ms 1s827ms 03 1 1s636ms 1s636ms 04 3 4s897ms 1s632ms 05 4 6s408ms 1s602ms 06 12 18s960ms 1s580ms 07 10 15s707ms 1s570ms 08 12 18s652ms 1s554ms 09 22 34s773ms 1s580ms 10 20 32s213ms 1s610ms 11 27 43s681ms 1s617ms 12 54 1m27s 1s620ms 13 43 1m8s 1s600ms 14 69 1m51s 1s614ms 15 114 3m3s 1s610ms 16 54 1m27s 1s622ms 17 64 1m43s 1s623ms 18 96 2m35s 1s624ms 19 159 4m16s 1s610ms 20 123 3m17s 1s606ms 21 99 2m38s 1s598ms 22 133 3m37s 1s634ms 23 152 4m2s 1s595ms Jun 11 00 165 4m24s 1s600ms 01 133 3m33s 1s606ms 02 191 4m58s 1s561ms 03 50 1m17s 1s557ms 04 57 1m27s 1s531ms 05 60 1m34s 1s569ms 06 79 2m6s 1s595ms 07 91 2m27s 1s625ms 08 106 2m49s 1s600ms 09 142 3m46s 1s597ms 10 119 3m7s 1s575ms 11 84 2m13s 1s589ms 12 127 3m35s 1s693ms 13 169 4m33s 1s620ms 14 164 4m23s 1s607ms 15 108 2m53s 1s604ms 16 158 4m11s 1s594ms 17 171 4m35s 1s608ms 18 173 4m34s 1s587ms 19 176 4m41s 1s598ms 20 213 5m42s 1s609ms 21 241 6m26s 1s605ms 22 232 6m14s 1s614ms 23 154 4m13s 1s643ms Jun 12 00 103 2m55s 1s702ms 01 59 1m38s 1s667ms 02 95 2m39s 1s683ms 03 116 3m16s 1s689ms 04 99 2m46s 1s682ms 05 181 5m2s 1s669ms 06 54 1m29s 1s655ms 07 41 1m6s 1s631ms 08 121 3m17s 1s629ms 09 65 1m45s 1s628ms 10 72 1m57s 1s634ms 11 83 2m16s 1s641ms 12 111 3m4s 1s658ms 13 105 2m49s 1s616ms 14 183 4m55s 1s617ms 15 121 3m16s 1s625ms 16 95 2m35s 1s636ms 17 81 2m12s 1s641ms 18 80 2m11s 1s644ms 19 102 2m48s 1s652ms 20 147 4m2s 1s651ms 21 80 2m12s 1s659ms 22 83 2m18s 1s662ms 23 36 59s873ms 1s663ms Jun 13 00 45 1m15s 1s679ms 01 93 2m33s 1s651ms 02 63 1m42s 1s629ms 03 32 52s392ms 1s637ms [ User: pubeu - Total duration: 19m43s - Times executed: 726 ]
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-11 12:38:52 Duration: 3s374ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-11 17:10:38 Duration: 3s374ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ ;
Date: 2025-06-10 16:05:29 Duration: 3s232ms Database: ctdprd51 User: pubeu Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 33s342ms 2 16s671ms 16s671ms 16s671ms SELECT /* ChemGenesDAO */ ;Times Reported Time consuming prepare #1
Day Hour Count Duration Avg duration Jun 14 10 2 33s342ms 16s671ms -
SELECT /* ChemGenesDAO */ ;
Date: 2025-06-11 10:47:30 Duration: 16s671ms Database: postgres
2 10s638ms 1 10s638ms 10s638ms 10s638ms SELECT /* BasicCountsDAO gen */ ii.cd;Times Reported Time consuming prepare #2
Day Hour Count Duration Avg duration 01 1 10s638ms 10s638ms -
SELECT /* BasicCountsDAO gen */ ii.cd;
Date: 2025-06-11 02:38:31 Duration: 10s638ms Database: postgres
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 22s285ms 21 1s41ms 1s78ms 1s61ms SELECT /* GeneDiseaseRefsDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT COALESCE(gdr.source_acc_txt, 'ZZZ' || r.sort_txt) refcolsort, CASE WHEN gdr.source_acc_db_id IS NOT NULL THEN get_disease_ixn_source_link_html (gdr.source_acc_db_id, gdr.source_acc_txt) ELSE NULL END AS sourceacclink, r.acc_txt refAcc, gdr.source_acc_txt sourceAcc, gdr.source_acc_db_id sourceAccDbId, r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, gdr.gene_id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, gdr.disease_id diseaseid, r.has_exposures hasExposures FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2) i ORDER BY 1 LIMIT 50;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Jun 14 14 2 2s121ms 1s60ms 18 4 4s247ms 1s61ms Jun 14 20 2 2s105ms 1s52ms Jun 14 06 2 2s117ms 1s58ms 18 2 2s157ms 1s78ms 19 2 2s147ms 1s73ms Jun 14 12 2 2s123ms 1s61ms 21 2 2s101ms 1s50ms 22 2 2s121ms 1s60ms Jun 14 01 1 1s41ms 1s41ms -
SELECT /* GeneDiseaseRefsDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT COALESCE(gdr.source_acc_txt, 'ZZZ' || r.sort_txt) refcolsort, CASE WHEN gdr.source_acc_db_id IS NOT NULL THEN get_disease_ixn_source_link_html (gdr.source_acc_db_id, gdr.source_acc_txt) ELSE NULL END AS sourceacclink, r.acc_txt refAcc, gdr.source_acc_txt sourceAcc, gdr.source_acc_db_id sourceAccDbId, r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, gdr.gene_id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, gdr.disease_id diseaseid, r.has_exposures hasExposures FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2) i ORDER BY 1 LIMIT 50;
Date: 2025-06-10 18:09:39 Duration: 1s78ms Database: postgres parameters: $1 = '802576', $2 = '802576'
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SELECT /* GeneDiseaseRefsDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT COALESCE(gdr.source_acc_txt, 'ZZZ' || r.sort_txt) refcolsort, CASE WHEN gdr.source_acc_db_id IS NOT NULL THEN get_disease_ixn_source_link_html (gdr.source_acc_db_id, gdr.source_acc_txt) ELSE NULL END AS sourceacclink, r.acc_txt refAcc, gdr.source_acc_txt sourceAcc, gdr.source_acc_db_id sourceAccDbId, r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, gdr.gene_id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, gdr.disease_id diseaseid, r.has_exposures hasExposures FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2) i ORDER BY 1 LIMIT 50;
Date: 2025-06-10 19:42:31 Duration: 1s73ms Database: postgres parameters: $1 = '4', $2 = 'S'
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SELECT /* GeneDiseaseRefsDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT COALESCE(gdr.source_acc_txt, 'ZZZ' || r.sort_txt) refcolsort, CASE WHEN gdr.source_acc_db_id IS NOT NULL THEN get_disease_ixn_source_link_html (gdr.source_acc_db_id, gdr.source_acc_txt) ELSE NULL END AS sourceacclink, r.acc_txt refAcc, gdr.source_acc_txt sourceAcc, gdr.source_acc_db_id sourceAccDbId, r.id, r.abbr_authors_txt authors, r.title, r.core_citation_txt citation, r.pub_start_yr yr, r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes iscurated, gdr.gene_id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, gdr.disease_id diseaseid, r.has_exposures hasExposures FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2) i ORDER BY 1 LIMIT 50;
Date: 2025-06-08 18:51:39 Duration: 1s69ms Database: postgres parameters: $1 = '2104674'
2 6s411ms 6 1s40ms 1s83ms 1s68ms SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 2, 8, 14 LIMIT 50;Times Reported Time consuming bind #2
Day Hour Count Duration Avg duration 11 2 2s81ms 1s40ms 19 2 2s162ms 1s81ms 21 2 2s167ms 1s83ms -
SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 2, 8, 14 LIMIT 50;
Date: 2025-06-11 22:52:58 Duration: 1s83ms Database: postgres parameters: $1 = '4', $2 = 'A'
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SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 2, 8, 14 LIMIT 50;
Date: 2025-06-11 20:21:45 Duration: 1s81ms Database: postgres parameters: $1 = '4', $2 = 'A'
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SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 2, 8, 14 LIMIT 50;
Date: 2025-06-11 12:28:21 Duration: 1s40ms Database: postgres parameters: $1 = '4', $2 = 'A'
3 6s320ms 6 1s24ms 1s86ms 1s53ms SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = $1 or receptorTerm.id = $2 GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;Times Reported Time consuming bind #3
Day Hour Count Duration Avg duration 15 2 2s97ms 1s48ms 19 2 2s173ms 1s86ms 16 2 2s48ms 1s24ms -
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = $1 or receptorTerm.id = $2 GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 20:58:32 Duration: 1s86ms Database: postgres parameters: $1 = '1924077', $2 = '1924077'
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = $1 or receptorTerm.id = $2 GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-10 16:00:59 Duration: 1s48ms Database: postgres parameters: $1 = '1819542', $2 = '1819542'
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SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = $1 or receptorTerm.id = $2 GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-11 17:10:58 Duration: 1s24ms Database: postgres parameters: $1 = '1782138', $2 = '1782138'
4 4s691ms 4 1s67ms 1s278ms 1s172ms SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like $3) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;Times Reported Time consuming bind #4
Day Hour Count Duration Avg duration 19 4 4s691ms 1s172ms -
SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like $3) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-10 20:58:27 Duration: 1s278ms Database: postgres parameters: $1 = '1341270', $2 = '1341270', $3 = 'chem%'
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SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term chem, exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1, term t, exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like $3) and event1.id = e1.exp_event_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-10 20:53:58 Duration: 1s67ms Database: postgres parameters: $1 = '1411566', $2 = '1411566', $3 = 'chem%'
5 4s263ms 4 1s35ms 1s96ms 1s65ms SELECT /* GeneDiseaseRefActionsDAO */ DISTINCT a.action_type_cd actionTypeCd, a.action_type_nm actionTypeNm FROM gene_disease_reference_axn a INNER JOIN gene_disease_reference gdr ON a.gene_disease_reference_id = gdr.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2 AND gdr.reference_id = $3 ORDER BY a.action_type_nm;Times Reported Time consuming bind #5
Day Hour Count Duration Avg duration 08 2 2s192ms 1s96ms 11 2 2s70ms 1s35ms -
SELECT /* GeneDiseaseRefActionsDAO */ DISTINCT a.action_type_cd actionTypeCd, a.action_type_nm actionTypeNm FROM gene_disease_reference_axn a INNER JOIN gene_disease_reference gdr ON a.gene_disease_reference_id = gdr.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2 AND gdr.reference_id = $3 ORDER BY a.action_type_nm;
Date: 2025-06-08 09:34:42 Duration: 1s96ms Database: postgres parameters: $1 = '4', $2 = 'A'
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SELECT /* GeneDiseaseRefActionsDAO */ DISTINCT a.action_type_cd actionTypeCd, a.action_type_nm actionTypeNm FROM gene_disease_reference_axn a INNER JOIN gene_disease_reference gdr ON a.gene_disease_reference_id = gdr.id WHERE gdr.gene_id = $1 AND gdr.disease_id = $2 AND gdr.reference_id = $3 ORDER BY a.action_type_nm;
Date: 2025-06-11 12:43:07 Duration: 1s35ms Database: postgres parameters: $1 = '4', $2 = '#'
6 2s304ms 2 1s152ms 1s152ms 1s152ms SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 2, 8, 14;Times Reported Time consuming bind #6
Day Hour Count Duration Avg duration 15 2 2s304ms 1s152ms -
SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 2, 8, 14;
Date: 2025-06-10 16:05:25 Duration: 1s152ms Database: postgres parameters: $1 = '4', $2 = 'A'
7 2s180ms 2 1s90ms 1s90ms 1s90ms SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 6, 2, 8, 14 LIMIT 50;Times Reported Time consuming bind #7
Day Hour Count Duration Avg duration 11 2 2s180ms 1s90ms -
SELECT /* ReferenceDiseasesDAO */ i.*, COUNT(*) OVER () fullRowCount FROM ( SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM chem_disease_reference_axn a WHERE a.chem_disease_reference_id = cdr.id) actionTypes, c.nm chemnm, c.nm_sort chemnmsort, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casRN, c.id chemId, NULL geneSymbol, NULL geneSymbolSort, NULL geneAcc, NULL geneAccDbCd, NULL geneId FROM chem_disease_reference cdr INNER JOIN term c ON cdr.chem_id = c.id INNER JOIN term d ON cdr.disease_id = d.id WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT d.nm diseasenm, d.nm_sort diseasenmsort, d.acc_txt diseaseacc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_reference_axn a WHERE a.gene_disease_reference_id = gdr.id) actionTypes, NULL chemnm, NULL chemnmsort, NULL chemnmhtml, NULL chemacc, NULL chemId, NULL casRN, g.nm geneSymbol, g.nm_sort geneSymbolSort, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id WHERE gdr.reference_id = $2 AND gdr.source_cd IN ('C', 'O')) i ORDER BY 6, 2, 8, 14 LIMIT 50;
Date: 2025-06-11 12:44:27 Duration: 1s90ms Database: postgres
8 2s32ms 2 1s16ms 1s16ms 1s16ms SELECT /* GeneDiseaseChemsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.id chemid FROM term c WHERE c.id IN ( SELECT gdr.via_chem_id FROM gene_disease_reference gdr WHERE gdr.gene_id = $1 AND gdr.disease_id = $2) ORDER BY c.nm_sort;Times Reported Time consuming bind #8
Day Hour Count Duration Avg duration 11 2 2s32ms 1s16ms -
SELECT /* GeneDiseaseChemsDAO */ c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.id chemid FROM term c WHERE c.id IN ( SELECT gdr.via_chem_id FROM gene_disease_reference gdr WHERE gdr.gene_id = $1 AND gdr.disease_id = $2) ORDER BY c.nm_sort;
Date: 2025-06-11 12:39:57 Duration: 1s16ms Database: postgres parameters: $1 = '4', $2 = 'A'
9 2s29ms 2 1s14ms 1s14ms 1s14ms SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term disease, exp_outcome o1 where disease.id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) and disease.id = o1.disease_id and o1.id = e1.exp_outcome_id UNION select reference_id from exposure e1, term t, exp_receptor r where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) and t.id = r.term_id and r.id = e1.exp_receptor_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;Times Reported Time consuming bind #9
Day Hour Count Duration Avg duration 11 2 2s29ms 1s14ms -
SELECT /* ChemExposureStudiesAssnsDAO */ e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, ( SELECT STRING_AGG(distinct stressorTerm.nm || '^' || ( select cd from object_type where id = stressorTerm.object_type_id) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd, '|')) as stressorAgents, ( SELECT STRING_AGG(distinct COALESCE(receptorTerm.nm, '') || '^' || COALESCE(( select cd from object_type where id = receptorTerm.object_type_id), '') || '^' || COALESCE(receptorTerm.nm_html, '') || '^' || COALESCE(receptorTerm.acc_txt, '') || '^' || COALESCE(receptorTerm.acc_db_cd, '') || '^' || receptor.description, '|')) as receptors, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, ( SELECT STRING_AGG(distinct location.locality_txt, ' | ')) as localities, ( SELECT STRING_AGG(distinct event.medium_nm || '^' || COALESCE(event.medium_term_acc_txt, ''), ' | ')) as assayMediums, ( SELECT STRING_AGG(distinct exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd, '|')) as assayedMarkers, ( SELECT STRING_AGG(distinct diseaseTerm.nm || '^' || ( select cd from object_type where id = diseaseTerm.object_type_id) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd, '|')) as diseases, ( SELECT STRING_AGG(distinct phenotypeTerm.nm || '^' || ( select cd from object_type where id = phenotypeTerm.object_type_id) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd, '|')) as phenotypes, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, re.author_summary summary, COUNT(*) OVER () fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (ARRAY ( select reference_id from exposure e1, term disease, exp_outcome o1 where disease.id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) and disease.id = o1.disease_id and o1.id = e1.exp_outcome_id UNION select reference_id from exposure e1, term t, exp_receptor r where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) and t.id = r.term_id and r.id = e1.exp_receptor_id)) group by e.reference_acc_txt, r.abbr_authors_txt, pub_start_yr, re.author_summary order by stressorAgents LIMIT 50;
Date: 2025-06-11 12:35:11 Duration: 1s14ms Database: postgres parameters: $1 = '4', $2 = 'A'
10 1s98ms 1 1s98ms 1s98ms 1s98ms SELECT /* ReferenceCitedDiseasesDAO */ d.id, d.nm, d.nm_html nmHtml, d.acc_txt acc, d.acc_db_cd accdbcd, d.has_chems hasChems, d.has_genes hasGenes FROM term d WHERE d.id IN ( SELECT gdr.disease_id FROM gene_disease_reference gdr WHERE gdr.reference_id = $1 AND gdr.source_cd IN ('C', 'O') UNION ALL SELECT cdr.disease_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $2 AND cdr.source_cd = 'C' UNION ALL select outcome.disease_id from exposure e, exp_outcome outcome where e.reference_id = $3 and e.exp_outcome_id = outcome.id) ORDER BY d.nm_sort;Times Reported Time consuming bind #10
Day Hour Count Duration Avg duration 02 1 1s98ms 1s98ms -
SELECT /* ReferenceCitedDiseasesDAO */ d.id, d.nm, d.nm_html nmHtml, d.acc_txt acc, d.acc_db_cd accdbcd, d.has_chems hasChems, d.has_genes hasGenes FROM term d WHERE d.id IN ( SELECT gdr.disease_id FROM gene_disease_reference gdr WHERE gdr.reference_id = $1 AND gdr.source_cd IN ('C', 'O') UNION ALL SELECT cdr.disease_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $2 AND cdr.source_cd = 'C' UNION ALL select outcome.disease_id from exposure e, exp_outcome outcome where e.reference_id = $3 and e.exp_outcome_id = outcome.id) ORDER BY d.nm_sort;
Date: 2025-06-08 03:06:46 Duration: 1s98ms Database: postgres parameters: $1 = '4', $2 = 'A'
11 1s81ms 1 1s81ms 1s81ms 1s81ms SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;Times Reported Time consuming bind #11
Day Hour Count Duration Avg duration 03 1 1s81ms 1s81ms -
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where outcome.disease_id in ( select descendant_object_id from dag_path where ancestor_object_id = $1) or receptorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = $2) GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by chemNmSort LIMIT 50;
Date: 2025-06-07 04:32:17 Duration: 1s81ms Database: postgres parameters: $1 = '2106284', $2 = '2106284'
12 0ms 25,122 0ms 0ms 0ms ;Times Reported Time consuming bind #12
Day Hour Count Duration Avg duration Jun 07 03 2 0ms 0ms 04 2 0ms 0ms 05 2 0ms 0ms 06 5 0ms 0ms 07 7 0ms 0ms 08 10 0ms 0ms 09 17 0ms 0ms 10 26 0ms 0ms 11 34 0ms 0ms 12 55 0ms 0ms 13 74 0ms 0ms 14 132 0ms 0ms 15 139 0ms 0ms 16 182 0ms 0ms 17 195 0ms 0ms 18 282 0ms 0ms 19 283 0ms 0ms 20 261 0ms 0ms 21 291 0ms 0ms 22 312 0ms 0ms 23 260 0ms 0ms Jun 08 00 265 0ms 0ms 01 255 0ms 0ms 02 294 0ms 0ms 03 404 0ms 0ms 04 482 0ms 0ms 05 392 0ms 0ms 06 468 0ms 0ms 08 34 0ms 0ms 09 488 0ms 0ms 10 218 0ms 0ms 17 20 0ms 0ms 18 16 0ms 0ms 22 2 0ms 0ms Jun 09 00 2 0ms 0ms 06 20 0ms 0ms 07 44 0ms 0ms 08 24 0ms 0ms 09 26 0ms 0ms 10 8 0ms 0ms 11 30 0ms 0ms 12 2 0ms 0ms 14 22 0ms 0ms 15 12 0ms 0ms 16 52 0ms 0ms 17 16 0ms 0ms 18 18 0ms 0ms 19 26 0ms 0ms 20 8 0ms 0ms 21 2 0ms 0ms 22 30 0ms 0ms 23 8 0ms 0ms Jun 10 00 5 0ms 0ms 02 2 0ms 0ms 03 1 0ms 0ms 04 2 0ms 0ms 05 18 0ms 0ms 06 90 0ms 0ms 07 124 0ms 0ms 08 60 0ms 0ms 09 72 0ms 0ms 10 74 0ms 0ms 11 108 0ms 0ms 12 142 0ms 0ms 13 142 0ms 0ms 14 194 0ms 0ms 15 326 0ms 0ms 16 154 0ms 0ms 17 194 0ms 0ms 18 268 0ms 0ms 19 418 0ms 0ms 20 330 0ms 0ms 21 302 0ms 0ms 22 386 0ms 0ms 23 428 0ms 0ms Jun 11 00 226 0ms 0ms 01 203 0ms 0ms 02 247 0ms 0ms 03 94 0ms 0ms 04 170 0ms 0ms 05 160 0ms 0ms 06 184 0ms 0ms 07 420 0ms 0ms 08 882 0ms 0ms 09 390 0ms 0ms 10 326 0ms 0ms 11 266 0ms 0ms 12 296 0ms 0ms 13 476 0ms 0ms 14 450 0ms 0ms 15 294 0ms 0ms 16 452 0ms 0ms 17 466 0ms 0ms 18 438 0ms 0ms 19 452 0ms 0ms 20 496 0ms 0ms 21 630 0ms 0ms 22 544 0ms 0ms 23 382 0ms 0ms Jun 12 00 137 0ms 0ms 01 77 0ms 0ms 02 129 0ms 0ms 03 175 0ms 0ms 04 228 0ms 0ms 05 446 0ms 0ms 06 160 0ms 0ms 07 118 0ms 0ms 08 318 0ms 0ms 09 212 0ms 0ms 10 218 0ms 0ms 11 242 0ms 0ms 12 284 0ms 0ms 13 310 0ms 0ms 14 466 0ms 0ms 15 350 0ms 0ms 16 256 0ms 0ms 17 232 0ms 0ms 18 212 0ms 0ms 19 258 0ms 0ms 20 404 0ms 0ms 21 216 0ms 0ms 22 208 0ms 0ms 23 98 0ms 0ms Jun 13 00 74 0ms 0ms 01 115 0ms 0ms 02 76 0ms 0ms 03 51 0ms 0ms Jun 14 22 6 0ms 0ms 23 3 0ms 0ms [ User: pubeu - Total duration: 20m57s - Times executed: 729 ]
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;
Date: Duration: 0ms Database: postgres parameters: $1 = '1275099', $2 = '1275099'
-
Events
Log levels
Key values
- 945,764 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 413 FATAL entries
- 1774 ERROR entries
- 0 WARNING entries
- 105 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 1,394 Max number of times the same event was reported
- 2,292 Total events found
Rank Times reported Error 1 1,394 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #1
Day Hour Count Jun 08 00 1 02 2 03 1 04 2 05 3 06 1 09 1 11 1 12 1 15 1 17 102 18 17 19 190 20 254 21 46 22 37 23 72 Jun 09 00 44 09 1 11 1 17 2 Jun 10 01 2 04 3 06 1 07 1 09 1 20 1 22 1 Jun 11 01 3 06 1 07 97 08 111 09 158 10 162 11 40 20 1 21 1 22 1 Jun 12 02 3 07 1 16 1 17 1 18 1 19 1 21 3 22 3 23 1 Jun 13 00 1 01 1 02 2 Jun 14 21 4 22 6 - ERROR: syntax error in ts"サンリオ スタンプセット"
- ERROR: syntax error in ts"HE & ANALYTICAL & COHORT & CONSISTED & OF & 6412 & PRIVATELY & INSURED & AND & 3694 & UNINSURED & PATIENTS. & OVERALL & MEDIAN & HOSPITAL & CHARGES & WERE & 628 & INTERQUARTILE & RANGE & 758– 386 & . & RISK & OF & FINANCIAL & TOXICITY & WAS & 86.5% & AMONG & UNINSURED & PATIENTS & AND & 0% & AMONG & INSURED & PATIENTS. & PREDICTORS & OF & FINANCIAL & TOXICITY & INCLUDED & EMERGENCY & ADMISSION, & BEING & IN & THE & LOWEST & RESIDENTIAL & INCOME & QUARTILE & AND & HAVING & ULCERATIVE & COLITIS & COMPARED & TO & CROHN & S & DISEASE & . & ADDITIONAL & PREDICTORS & WERE & BEING & OF & BLACK & RACE & OR & MALE & SEX."
- ERROR: syntax error in ts"クアラルンプール国際空港 & エアアジア到着 市内移動"
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-06-08 03:27:25
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 OR upper( l.acc_txt ) = $6 OR upper( l.acc_txt ) = $7 OR upper( l.acc_txt ) = $8 OR upper( l.acc_txt ) = $9 OR upper( l.acc_txt ) = $10 OR upper( l.acc_txt ) = $11 OR upper( l.acc_txt ) = $12 OR upper( l.acc_txt ) = $13 OR upper( l.acc_txt ) = $14 OR upper( l.acc_txt ) = $15 OR upper( l.acc_txt ) = $16 OR upper( l.acc_txt ) = $17 OR upper( l.acc_txt ) = $18 OR upper( l.acc_txt ) = $19 OR upper( l.acc_txt ) = $20 OR upper( l.acc_txt ) = $21 OR upper( l.acc_txt ) = $22 OR upper( l.acc_txt ) = $23 OR upper( l.acc_txt ) = $24 OR upper( l.acc_txt ) = $25 OR upper( l.acc_txt ) = $26 OR upper( l.acc_txt ) = $27 OR upper( l.acc_txt ) = $28 OR upper( l.acc_txt ) = $29 OR upper( l.acc_txt ) = $30 OR upper( l.acc_txt ) = $31 OR upper( l.acc_txt ) = $32 OR upper( l.acc_txt ) = $33 OR upper( l.acc_txt ) = $34 OR upper( l.acc_txt ) = $35 OR upper( l.acc_txt ) = $36 OR upper( l.acc_txt ) = $37 OR upper( l.acc_txt ) = $38 OR upper( l.acc_txt ) = $39 OR upper( l.acc_txt ) = $40 OR upper( l.acc_txt ) = $41 OR upper( l.acc_txt ) = $42 OR upper( l.acc_txt ) = $43 OR upper( l.acc_txt ) = $44 OR upper( l.acc_txt ) = $45 OR upper( l.acc_txt ) = $46 OR upper( l.acc_txt ) = $47 OR upper( l.acc_txt ) = $48 OR upper( l.acc_txt ) = $49 OR upper( l.acc_txt ) = $50 OR upper( l.acc_txt ) = $51 OR upper( l.acc_txt ) = $52 OR upper( l.acc_txt ) = $53 OR upper( l.acc_txt ) = $54 OR upper( l.acc_txt ) = $55 OR upper( l.acc_txt ) = $56 OR upper( l.acc_txt ) = $57 OR upper( l.acc_txt ) = $58 OR upper( l.acc_txt ) = $59 OR upper( l.acc_txt ) = $60 OR upper( l.acc_txt ) = $61 OR upper( l.acc_txt ) = $62 OR upper( l.acc_txt ) = $63 OR upper( l.acc_txt ) = $64 OR upper( l.acc_txt ) = $65 OR upper( l.acc_txt ) = $66 OR upper( l.acc_txt ) = $67 OR upper( l.acc_txt ) = $68 OR upper( l.acc_txt ) = $69 OR upper( l.acc_txt ) = $70 OR upper( l.acc_txt ) = $71 OR upper( l.acc_txt ) = $72 OR upper( l.acc_txt ) = $73 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-06-08 05:35:35
Statement: SELECT /* GeneBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = $3 OR upper( l.acc_txt ) = $4 OR upper( l.acc_txt ) = $5 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2025-06-08 05:51:35
2 152 FATAL: database "..." does not exist
Times Reported Most Frequent Error / Event #2
Day Hour Count Jun 14 18 65 19 78 20 9 3 95 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #3
Day Hour Count Jun 08 03 1 04 1 05 1 07 8 13 1 21 6 22 5 23 4 Jun 09 10 2 18 1 21 2 Jun 10 00 1 12 1 15 1 19 1 22 1 Jun 11 00 1 02 3 04 1 06 1 07 1 09 1 10 5 11 1 12 8 13 2 14 1 15 1 16 2 17 5 18 2 19 1 20 5 23 1 Jun 12 00 1 02 2 04 1 06 1 11 1 15 1 17 2 19 1 21 2 22 1 Jun 13 02 1 03 2 - FATAL: connection to client lost
- FATAL: connection to client lost
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-06-08 07:10:50
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes
Date: 2025-06-08 07:10:50
4 93 LOG: could not send data to client: Broken pipe
Times Reported Most Frequent Error / Event #4
Day Hour Count Jun 08 03 1 04 1 05 1 07 9 13 1 21 6 22 5 23 4 Jun 09 18 1 21 2 Jun 10 00 1 12 1 15 1 19 1 22 1 Jun 11 00 1 02 3 04 1 06 1 07 1 09 1 10 5 11 1 12 8 13 2 14 1 15 1 16 2 17 5 18 2 19 1 20 3 23 1 Jun 12 00 1 02 2 04 1 06 1 11 1 15 1 17 2 19 1 21 2 22 1 Jun 13 02 1 03 3 - LOG: could not send data to client: Broken pipe
- LOG: could not send data to client: Broken pipe
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-06-08 07:10:50 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p
Date: 2025-06-08 07:10:50 Database: ctdprd51 Application: User: pubeu Remote:
5 89 ERROR: value too long for type character varying(...)
Times Reported Most Frequent Error / Event #5
Day Hour Count Jun 08 19 14 21 9 23 19 Jun 09 07 1 12 4 Jun 10 05 1 07 2 09 2 13 10 18 1 Jun 11 05 1 09 9 10 4 19 1 20 2 Jun 12 02 1 03 2 05 1 06 1 09 1 15 1 16 1 Jun 14 22 1 - ERROR: value too long for type character varying(32)
- ERROR: value too long for type character varying(4)
- ERROR: value too long for type character varying(256)
Statement: INSERT /* AdvancedQueryDAO.logQuery */ INTO pubc.log_query (type_cd ,query_tm ,submission_qty ,session_id ,server_nm ,node_nm ,remote_addr ,http_user_agent ,results_qty ,execution_ms ,gene_txt ,taxon_txt ,chem_txt ,acc_txt ,party_nm_txt ,gene_query_type ,taxon_query_type ,chem_query_type ,party_query_type ,action_type_txt ,pathway_txt ,pathway_query_type ,gene_form_type_txt ,action_degree_type_txt,go_txt ,go_query_type ,disease_txt ,disease_query_type ,gd_assn_type ,from_yr ,through_yr ,title_abstract_txt ,review_status ) VALUES ($1 ,CURRENT_TIMESTAMP ,1 ,$2 ,$3 ,NULLIF($4,'') ,SUBSTR($5,1,128) ,NULLIF(SUBSTR($6,1,256),'') ,$7 ,NULLIF($8,-1) ,NULLIF($9,'') ,NULLIF($10,'') ,NULLIF($11,'') ,NULLIF(SUBSTR($12,1,4000),'') ,NULLIF($13,'') ,NULLIF($14,'') ,NULLIF($15,'') ,NULLIF($16,'') ,NULLIF($17,'') ,NULLIF(SUBSTR($18,1,4000),'') ,NULLIF(SUBSTR($19,1,4000),'') ,NULLIF(SUBSTR($20,1,4000),'') ,NULLIF(SUBSTR($21,1,4000),'') ,NULLIF(SUBSTR($22,1,4000),'') ,NULLIF($23,'') ,NULLIF($24,'') ,NULLIF(SUBSTR($25,1,4000),'') ,NULLIF($26,'') ,NULLIF($27,'') ,NULLIF($28,0) ,NULLIF($29,0) ,NULLIF($30,'') ,NULLIF($31,'') ) RETURNING id
Date: 2025-06-08 19:13:24
Statement: INSERT INTO pubc.log_query (type_cd ,query_tm ,submission_qty ,session_id ,server_nm ,remote_addr ,results_qty ,basic_query_txt ,batch_input_type_txt ,results_format_txt ,dag_txt ,action_type_txt ,action_degree_type_txt ,http_user_agent ,node_nm ,execution_ms ) VALUES ($1 ,CURRENT_TIMESTAMP ,1 ,$2 ,$3 ,SUBSTR($4,1,128) ,$5 ,SUBSTR($6,1,4000) ,$7 ,NULLIF($8,'') ,NULLIF(SUBSTR($9,1,128),'') ,NULLIF(SUBSTR($10,1,4000),'') ,NULLIF(SUBSTR($11,1,4000),'') ,NULLIF(SUBSTR($12,1,256),'') ,NULLIF($13,'') ,NULLIF($14,-1) )
Date: 2025-06-08 19:50:29
Statement: INSERT /* AdvancedQueryDAO.logQuery */ INTO pubc.log_query (type_cd ,query_tm ,submission_qty ,session_id ,server_nm ,node_nm ,remote_addr ,http_user_agent ,results_qty ,execution_ms ,gene_txt ,taxon_txt ,chem_txt ,acc_txt ,party_nm_txt ,gene_query_type ,taxon_query_type ,chem_query_type ,party_query_type ,action_type_txt ,pathway_txt ,pathway_query_type ,gene_form_type_txt ,action_degree_type_txt,go_txt ,go_query_type ,disease_txt ,disease_query_type ,gd_assn_type ,from_yr ,through_yr ,title_abstract_txt ,review_status ) VALUES ($1 ,CURRENT_TIMESTAMP ,1 ,$2 ,$3 ,NULLIF($4,'') ,SUBSTR($5,1,128) ,NULLIF(SUBSTR($6,1,256),'') ,$7 ,NULLIF($8,-1) ,NULLIF($9,'') ,NULLIF($10,'') ,NULLIF($11,'') ,NULLIF(SUBSTR($12,1,4000),'') ,NULLIF($13,'') ,NULLIF($14,'') ,NULLIF($15,'') ,NULLIF($16,'') ,NULLIF($17,'') ,NULLIF(SUBSTR($18,1,4000),'') ,NULLIF(SUBSTR($19,1,4000),'') ,NULLIF(SUBSTR($20,1,4000),'') ,NULLIF(SUBSTR($21,1,4000),'') ,NULLIF(SUBSTR($22,1,4000),'') ,NULLIF($23,'') ,NULLIF($24,'') ,NULLIF(SUBSTR($25,1,4000),'') ,NULLIF($26,'') ,NULLIF($27,'') ,NULLIF($28,0) ,NULLIF($29,0) ,NULLIF($30,'') ,NULLIF($31,'') ) RETURNING id COALESCE(st.alt_nm,t.nm) slimTermNm ,(SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0 ) curatedCount ,(SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $2) AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0 ) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1
Date: 2025-06-09 07:13:33
6 60 FATAL: remaining connection slots are reserved for non-replication superuser connections
Times Reported Most Frequent Error / Event #6
Day Hour Count Jun 11 02 4 04 56 7 55 FATAL: canceling authentication due to timeout
Times Reported Most Frequent Error / Event #7
Day Hour Count Jun 08 06 1 07 4 08 5 Jun 09 00 7 08 2 10 8 20 10 21 17 22 1 8 43 ERROR: invalid byte sequence for encoding
Times Reported Most Frequent Error / Event #8
Day Hour Count Jun 08 18 20 20 1 21 2 Jun 10 07 1 Jun 11 08 11 09 3 10 2 11 3 - ERROR: invalid byte sequence for encoding "UTF8": 0x00
- ERROR: invalid byte sequence for encoding "UTF8": 0x00
- ERROR: invalid byte sequence for encoding "UTF8": 0x00
Context: unnamed portal parameter $12
Statement: INSERT INTO /* BatchLoggingDAO */ pubc.log_query (type_cd ,query_tm ,submission_qty ,session_id ,server_nm ,node_nm ,remote_addr ,http_user_agent ,results_qty ,execution_ms ,batch_input_type_txt ,dag_txt ,results_format_txt ,action_type_txt ,basic_query_txt ,input_term_qty ) VALUES ($1 ,CURRENT_TIMESTAMP ,1 ,$2 ,$3 ,NULLIF($4,'') ,SUBSTR($5,1,128) ,NULLIF(SUBSTR($6,1,256),'') ,$7 ,NULLIF($8,-1) ,NULLIF($9,'') ,NULLIF(SUBSTR($10,1,128),'') ,NULLIF($11,'') ,NULLIF(SUBSTR($12,1,4000),'') ,NULLIF($13,'') ,$14 )Date: 2025-06-08 18:09:48
Context: unnamed portal parameter $1
Statement: SELECT /* GeneIdBySymbolAccDAO */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li INNER JOIN term_label_type lti ON li.term_label_type_id = lti.id AND li.object_type_id = lti.object_type_id AND UPPER(li.nm) = $1 AND lti.object_type_id = 4 AND lti.nm = 'SYMBOL' UNION SELECT l.object_id FROM db_link l WHERE l.acc_txt = $2 AND l.object_type_id = 4 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2025-06-08 18:14:17
Context: unnamed portal parameter $1
Statement: SELECT /* ObjectIdDAOImpl.LabelsAndAccs */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li WHERE UPPER(li.nm) = $1 AND li.object_type_id = 2 UNION SELECT l.object_id FROM db_link l WHERE upper( l.acc_txt ) = $2 AND l.object_type_id = 2 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2025-06-08 18:14:47
9 42 FATAL: terminating connection due to administrator command
Times Reported Most Frequent Error / Event #9
Day Hour Count Jun 14 16 42 10 32 ERROR: canceling statement due to user request
Times Reported Most Frequent Error / Event #10
Day Hour Count Jun 08 21 6 22 5 23 4 Jun 11 02 2 10 3 17 5 20 5 Jun 13 03 2 - ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
- ERROR: canceling statement due to user request
Statement: SELECT row_to_json (T) FROM ( SELECT sum(numbackends) as numbackends , sum(xact_commit) as xact_commit , sum(xact_rollback) as xact_rollback , sum(blks_read) as blks_read , sum(blks_hit) as blks_hit , sum(tup_returned) as tup_returned , sum(tup_fetched) as tup_fetched , sum(tup_inserted) as tup_inserted , sum(tup_updated) as tup_updated , sum(tup_deleted) as tup_deleted , sum(conflicts) as conflicts , sum(temp_files) as temp_files , sum(temp_bytes) as temp_bytes , sum(deadlocks) as deadlocks , sum(COALESCE(checksum_failures, 0)) as checksum_failures , sum(blk_read_time) as blk_read_time , sum(blk_write_time) as blk_write_time FROM pg_catalog.pg_stat_database ) T ;
Date: 2025-06-08 21:03:18 Database: postgres Application: User: zbx_monitor Remote:
Statement: SELECT count(*) FROM pg_catalog.pg_stat_all_tables WHERE (n_dead_tup/(n_live_tup+n_dead_tup)::float8) > 0.2 AND (n_live_tup+n_dead_tup) > 50;
Date: 2025-06-08 21:03:18
Statement: SELECT row_to_json (T) FROM ( SELECT checkpoints_timed , checkpoints_req , checkpoint_write_time , checkpoint_sync_time , buffers_checkpoint , buffers_clean , maxwritten_clean , buffers_backend , buffers_backend_fsync , buffers_alloc FROM pg_catalog.pg_stat_bgwriter ) T ;
Date: 2025-06-08 21:03:18
11 30 ERROR: remaining connection slots are reserved for non-replication superuser connections
Times Reported Most Frequent Error / Event #11
Day Hour Count Jun 11 02 1 04 29 - ERROR: remaining connection slots are reserved for non-replication superuser connections
- ERROR: remaining connection slots are reserved for non-replication superuser connections
- ERROR: remaining connection slots are reserved for non-replication superuser connections
Context: parallel worker
Statement: SELECT /* ReferenceCitedChemsDAO */ c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = $2 UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = $3 and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = $4 and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = $5 and ptr.term_object_type_id = 2) ORDER BY c.nm_sortDate: 2025-06-11 04:33:31 Database: ctdprd51 Application: User: pubeu Remote:
Context: parallel worker
Statement: SELECT /* TaxonGenesDAO */ * FROM ( SELECT g.nm genesymbol ,g.nm_sort genesymbolsort ,g.acc_txt geneacc ,g.acc_db_cd geneaccdbcd ,g.id geneid ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gt.gene_id FROM dag_path dp INNER JOIN gene_taxon gt ON dp.descendant_object_id = gt.taxon_id WHERE dp.ancestor_object_id = $1 UNION ALL SELECT gcr.gene_id FROM dag_path dp INNER JOIN gene_chem_reference gcr ON dp.descendant_object_id = gcr.taxon_id WHERE dp.ancestor_object_id = $2 ) OFFSET 0) mq ORDER BY mq.genesymbolsort LIMIT 50Date: 2025-06-11 04:33:31
Context: parallel worker
Statement: SELECT /* ChemGenesDAO */ g.nm geneSymbol ,g.id geneId ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,COUNT(gcr.ixn_id) ixnCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount ,COUNT(*) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.chem_id IN(SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) GROUP BY g.nm ,g.id ,g.acc_txt ,g.acc_db_cd ,g.nm_sort ORDER BY COUNT(gcr.ixn_id) DESC ,g.nm_sort LIMIT 50Date: 2025-06-11 04:33:31 Database: ctdprd51 Application: User: pubeu Remote:
12 8 FATAL: terminating background worker "..." due to administrator command
Times Reported Most Frequent Error / Event #12
Day Hour Count Jun 11 04 8 - FATAL: terminating background worker "parallel worker" due to administrator command
- FATAL: terminating background worker "parallel worker" due to administrator command
Statement: SELECT /* ChemGenesDAO */ g.nm geneSymbol ,g.id geneId ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,COUNT(gcr.ixn_id) ixnCount ,COUNT(DISTINCT gcr.taxon_id) taxonCount ,COUNT(*) OVER() fullRowCount FROM gene_chem_reference gcr INNER JOIN term g ON gcr.gene_id = g.id WHERE gcr.chem_id IN(SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) GROUP BY g.nm ,g.id ,g.acc_txt ,g.acc_db_cd ,g.nm_sort ORDER BY COUNT(gcr.ixn_id) DESC ,g.nm_sort LIMIT 50
Date: 2025-06-11 04:33:32
Statement: SELECT /* ReferenceCitedChemsDAO */ c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = $2 UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = $3 and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = $4 and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = $5 and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Date: 2025-06-11 04:33:32
13 8 ERROR: could not map dynamic shared memory segment
Times Reported Most Frequent Error / Event #13
Day Hour Count Jun 11 04 8 14 6 ERROR: syntax error in ts"..." FROM term d WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND d.object_type_id = 3
Times Reported Most Frequent Error / Event #14
Day Hour Count Jun 08 17 6 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+349-349-1=0+0+0+1 | 2+3493491=0+0+0+1) & (-- | )" FROM term d WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+349-349-1=0+0+0+1 | 2+3493491=0+0+0+1) & (-- | )') AND d.object_type_id = 3
Statement: SELECT /* IQH.getMasterDiseaseWhereContains.Disease */ d.id
Date: 2025-06-08 17:45:30
15 5 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #15
Day Hour Count Jun 08 17 5 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+304-304-1=0+0+0+1 | 3+3043041=0+0+0+1) & (-- | )" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+304-304-1=0+0+0+1 | 3+3043041=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-08 17:55:11
16 5 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...)') AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #16
Day Hour Count Jun 08 17 4 Jun 11 08 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-08 17:55:46
17 5 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & OR & (...) & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #17
Day Hour Count Jun 08 18 5 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+613-613-1=0+0+0+1 | 3+6136131=0+0+0+1) & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+613-613-1=0+0+0+1 | 3+6136131=0+0+0+1) & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 18:02:19
18 5 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #18
Day Hour Count Jun 08 17 4 Jun 11 08 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:55:46
19 5 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #19
Day Hour Count Jun 08 17 5 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+349-349-1=0+0+0+1 | 3+3493491=0+0+0+1) & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+349-349-1=0+0+0+1 | 3+3493491=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:45:33
20 5 ERROR: syntax error in ts"..." FROM term d WHERE d.nm_fts @@ to_tsquery(...)') AND d.object_type_id = 3
Times Reported Most Frequent Error / Event #20
Day Hour Count Jun 08 17 2 Jun 11 07 3 - ERROR: syntax error in ts"G9PTZ0CX & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" FROM term d WHERE d.nm_fts @@ to_tsquery('common.english_nostops','G9PTZ0CX & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND d.object_type_id = 3
Statement: SELECT /* IQH.getMasterDiseaseWhereContains.Disease */ d.id
Date: 2025-06-08 17:46:36
21 4 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #21
Day Hour Count Jun 08 18 4 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 18:02:51
22 4 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #22
Day Hour Count Jun 08 17 4 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+304-304-1=0+0+0+1 | 3+3043041=0+0+0+1) & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+304-304-1=0+0+0+1 | 3+3043041=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:55:11 Database: ctdprd51 Application: User: pubeu Remote:
23 4 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #23
Day Hour Count Jun 08 17 4 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+111-111-1=0+0+0+1 | 2+1111111=0+0+0+1) & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+111-111-1=0+0+0+1 | 2+1111111=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:51:13
24 4 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #24
Day Hour Count Jun 08 08 2 Jun 09 05 1 10 1 25 4 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT SELECT /* IQH.getMasterPathwayWhereContains */ tp.term_id FROM term p INNER JOIN term_pathway tp ON p.id = tp.pathway_id WHERE p.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #25
Day Hour Count Jun 08 17 4 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+566-566-1=0+0+0+1 | 2+5665661=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT SELECT /* IQH.getMasterPathwayWhereContains */ tp.term_id FROM term p INNER JOIN term_pathway tp ON p.id = tp.pathway_id WHERE p.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+566-566-1=0+0+0+1 | 2+5665661=0+0+0+1) & (-- | )') )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:59:40
26 3 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #26
Day Hour Count Jun 11 07 3 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-11 07:56:20
27 3 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #27
Day Hour Count Jun 09 13 1 Jun 11 11 2 - ERROR: syntax error at or near "\" at character 112
- ERROR: syntax error at or near "2025" at character 185
- ERROR: syntax error at or near "\" at character 1
Statement: /* * Cumulative query metrics. * * $Id: cumulative_query_metrics.sql 13065 2013-05-02 13:32:49Z mcr $ */ \pset format wrapped \pset columns 75 \pset pager off \pset border 1 \pset tuples_only off \pset footer off /* \pset title 'Distinct Hosts per Month' SELECT TO_CHAR(dt, 'YYYY-MM') "Month" ,COUNT(DISTINCT i.remote_addr) "Distinct Hosts" FROM (SELECT remote_addr ,DATE_TRUNC('month',query_tm) dt FROM log_query_archive) i GROUP BY TO_CHAR(dt, 'YYYY-MM') ORDER BY 1 DESC; */ \pset title 'Query Sessions per Month' SELECT TO_CHAR(i.dt, 'YYYY-MM') "Month" ,COUNT(DISTINCT i.session_id) "Query Sessions" FROM (SELECT session_id ,DATE_TRUNC('month',query_tm) dt FROM log_query_archive) i GROUP BY TO_CHAR(dt, 'YYYY-MM') ORDER BY 1 DESC; /* \pset title 'Avg Query Execution Time' SELECT TO_CHAR(a.query_tm, 'YYYY-MM') "Month" ,ROUND(AVG(a.execution_ms)/ 1000, 2) "Seconds" FROM log_query_archive a WHERE a.execution_ms IS NOT NULL AND a.type_cd NOT LIKE 'venn%' AND a.type_cd NOT LIKE 'myVenn%' AND a.type_cd NOT LIKE 'myGeneVenn%' AND a.type_cd NOT LIKE 'batch%' GROUP BY TO_CHAR(a.query_tm, 'YYYY-MM') ORDER BY 1; */ \pset title 'Total Queries' SELECT COALESCE(SUM(i.queries),0) "Queries" ,COUNT(DISTINCT i.session_id) "Query Sessions" ,COALESCE(ROUND(SUM(i.queries) / COUNT(DISTINCT i.session_id), 3), 0) "Avg Q/S" FROM (SELECT session_id ,COALESCE(SUM(submission_qty), 0) queries FROM log_query_archive GROUP BY session_id) i; \pset title 'Queries per Year' SELECT TO_CHAR(DATE_TRUNC('year',query_tm), 'YYYY') "Year" ,COALESCE(SUM(submission_qty), 0) "Queries" FROM log_query_archive GROUP BY DATE_TRUNC('year',query_tm) ORDER BY 1 DESC; \pset title 'Queries by Type' SELECT type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive GROUP BY type_cd ORDER BY 2 DESC; \pset title 'Field Frequency' SELECT type_cd "Type" ,'gene' "Field" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive WHERE gene_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd "Type" ,'geneForm' "Field" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive WHERE gene_form_type_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'geneSet' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE gene_set_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'disease' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE disease_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'taxon' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE taxon_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'chem' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE chem_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'acc' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE acc_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'author' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE party_nm_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'go' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE go_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'actionType' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE action_type_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'pathway' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE pathway_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'marrayOnly' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE has_marray = true GROUP BY type_cd UNION ALL SELECT type_cd ,'year' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE (through_yr IS NOT NULL OR from_yr IS NOT NULL) GROUP BY type_cd UNION ALL SELECT type_cd ,'journal' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE journal_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'volume' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE volume_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'first page' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE first_page_txt IS NOT NULL GROUP BY type_cd UNION ALL SELECT type_cd ,'review only' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE is_review = true GROUP BY type_cd UNION ALL SELECT type_cd ,'title/abstract' ,COALESCE(SUM(submission_qty), 0) FROM log_query_archive WHERE title_abstract_txt IS NOT NULL GROUP BY type_cd ORDER BY 1 ,3 DESC ,2; \pset title 'Gene Query Configurations' SELECT TRIM( CASE WHEN q.chem_txt IS NOT NULL THEN 'chem ' ELSE '' END || CASE WHEN q.gene_txt IS NOT NULL THEN 'gene ' ELSE '' END || CASE WHEN q.gene_form_type_txt IS NOT NULL THEN 'geneForm ' ELSE '' END || CASE WHEN q.gene_set_txt IS NOT NULL THEN 'geneSet ' ELSE '' END || CASE WHEN q.disease_txt IS NOT NULL THEN 'disease ' ELSE '' END || CASE WHEN q.pathway_txt IS NOT NULL THEN 'pathway ' ELSE '' END || CASE WHEN q.taxon_txt IS NOT NULL THEN 'taxon ' ELSE '' END || CASE WHEN q.party_nm_txt IS NOT NULL THEN 'author ' ELSE '' END || CASE WHEN q.acc_txt IS NOT NULL THEN 'acc ' ELSE '' END || CASE WHEN q.go_txt IS NOT NULL THEN 'go ' ELSE '' END || CASE WHEN q.has_marray IS true THEN 'marrayOnly ' ELSE '' END || CASE WHEN q.action_type_txt IS NOT NULL THEN 'actionType ' ELSE '' END || CASE WHEN q.basic_query_txt IS NOT NULL THEN 'keyword ' ELSE '' END) AS "Fields" ,COALESCE(SUM(q.submission_qty), 0) AS "Count" FROM log_query_archive q WHERE q.type_cd = 'gene' GROUP BY TRIM( CASE WHEN q.chem_txt IS NOT NULL THEN 'chem ' ELSE '' END || CASE WHEN q.gene_txt IS NOT NULL THEN 'gene ' ELSE '' END || CASE WHEN q.gene_form_type_txt IS NOT NULL THEN 'geneForm ' ELSE '' END || CASE WHEN q.gene_set_txt IS NOT NULL THEN 'geneSet ' ELSE '' END || CASE WHEN q.disease_txt IS NOT NULL THEN 'disease ' ELSE '' END || CASE WHEN q.pathway_txt IS NOT NULL THEN 'pathway ' ELSE '' END || CASE WHEN q.taxon_txt IS NOT NULL THEN 'taxon ' ELSE '' END || CASE WHEN q.party_nm_txt IS NOT NULL THEN 'author ' ELSE '' END || CASE WHEN q.acc_txt IS NOT NULL THEN 'acc ' ELSE '' END || CASE WHEN q.go_txt IS NOT NULL THEN 'go ' ELSE '' END || CASE WHEN q.has_marray IS true THEN 'marrayOnly ' ELSE '' END || CASE WHEN q.action_type_txt IS NOT NULL THEN 'actionType ' ELSE '' END || CASE WHEN q.basic_query_txt IS NOT NULL THEN 'keyword ' ELSE '' END) HAVING COALESCE(SUM(q.submission_qty), 0) > 3 ORDER BY 2 DESC ,1; \pset title 'Interaction Query Configurations' SELECT TRIM( CASE WHEN q.chem_txt IS NOT NULL THEN 'chem ' ELSE '' END || CASE WHEN q.gene_txt IS NOT NULL THEN 'gene ' ELSE '' END || CASE WHEN q.gene_form_type_txt IS NOT NULL THEN 'geneForm ' ELSE '' END || CASE WHEN q.pathway_txt IS NOT NULL THEN 'pathway ' ELSE '' END || CASE WHEN q.taxon_txt IS NOT NULL THEN 'taxon ' ELSE '' END || CASE WHEN q.go_txt IS NOT NULL THEN 'go ' ELSE '' END || CASE WHEN q.action_type_txt = 'ANY' THEN '' ELSE 'actionType ' END || CASE WHEN q.basic_query_txt IS NOT NULL THEN 'keyword ' ELSE '' END) AS "Fields" ,COALESCE(SUM(q.submission_qty), 0) AS "Count" FROM log_query_archive q WHERE q.type_cd = 'ixn' GROUP BY TRIM( CASE WHEN q.chem_txt IS NOT NULL THEN 'chem ' ELSE '' END || CASE WHEN q.gene_txt IS NOT NULL THEN 'gene ' ELSE '' END || CASE WHEN q.gene_form_type_txt IS NOT NULL THEN 'geneForm ' ELSE '' END || CASE WHEN q.pathway_txt IS NOT NULL THEN 'pathway ' ELSE '' END || CASE WHEN q.taxon_txt IS NOT NULL THEN 'taxon ' ELSE '' END || CASE WHEN q.go_txt IS NOT NULL THEN 'go ' ELSE '' END || CASE WHEN q.action_type_txt = 'ANY' THEN '' ELSE 'actionType ' END || CASE WHEN q.basic_query_txt IS NOT NULL THEN 'keyword ' ELSE '' END) HAVING COALESCE(SUM(q.submission_qty), 0) > 3 ORDER BY 2 DESC ,1; \pset title 'Reference Query Configurations' SELECT TRIM( CASE WHEN q.chem_txt IS NOT NULL THEN 'chem ' ELSE '' END || CASE WHEN q.gene_txt IS NOT NULL THEN 'gene ' ELSE '' END || CASE WHEN q.gene_form_type_txt IS NOT NULL THEN 'geneForm ' ELSE '' END || CASE WHEN q.disease_txt IS NOT NULL THEN 'disease ' ELSE '' END || CASE WHEN q.taxon_txt IS NOT NULL THEN 'taxon ' ELSE '' END || CASE WHEN q.party_nm_txt IS NOT NULL THEN 'author ' ELSE '' END || CASE WHEN q.acc_txt IS NOT NULL THEN 'acc ' ELSE '' END || CASE WHEN q.journal_txt IS NOT NULL THEN 'journal ' ELSE '' END || CASE WHEN q.title_abstract_txt IS NOT NULL THEN 'titleAbstract ' ELSE '' END || CASE WHEN q.from_yr IS NOT NULL THEN 'fromYr ' ELSE '' END || CASE WHEN q.through_yr IS NOT NULL THEN 'throughYr ' ELSE '' END || CASE WHEN q.volume_txt IS NOT NULL THEN 'volume ' ELSE '' END || CASE WHEN q.first_page_txt IS NOT NULL THEN 'firstPage ' ELSE '' END || CASE WHEN q.is_review = true THEN 'reviewsOnly ' ELSE '' END || CASE WHEN q.action_type_txt IS NOT NULL THEN 'actionType ' ELSE '' END || CASE WHEN q.basic_query_txt IS NOT NULL THEN 'keyword ' ELSE '' END) AS "Fields" ,COALESCE(SUM(q.submission_qty), 0) AS "Count" FROM log_query_archive q WHERE q.type_cd = 'reference' GROUP BY TRIM( CASE WHEN q.chem_txt IS NOT NULL THEN 'chem ' ELSE '' END || CASE WHEN q.gene_txt IS NOT NULL THEN 'gene ' ELSE '' END || CASE WHEN q.gene_form_type_txt IS NOT NULL THEN 'geneForm ' ELSE '' END || CASE WHEN q.disease_txt IS NOT NULL THEN 'disease ' ELSE '' END || CASE WHEN q.taxon_txt IS NOT NULL THEN 'taxon ' ELSE '' END || CASE WHEN q.party_nm_txt IS NOT NULL THEN 'author ' ELSE '' END || CASE WHEN q.acc_txt IS NOT NULL THEN 'acc ' ELSE '' END || CASE WHEN q.journal_txt IS NOT NULL THEN 'journal ' ELSE '' END || CASE WHEN q.title_abstract_txt IS NOT NULL THEN 'titleAbstract ' ELSE '' END || CASE WHEN q.from_yr IS NOT NULL THEN 'fromYr ' ELSE '' END || CASE WHEN q.through_yr IS NOT NULL THEN 'throughYr ' ELSE '' END || CASE WHEN q.volume_txt IS NOT NULL THEN 'volume ' ELSE '' END || CASE WHEN q.first_page_txt IS NOT NULL THEN 'firstPage ' ELSE '' END || CASE WHEN q.is_review = true THEN 'reviewsOnly ' ELSE '' END || CASE WHEN q.action_type_txt IS NOT NULL THEN 'actionType ' ELSE '' END || CASE WHEN q.basic_query_txt IS NOT NULL THEN 'keyword ' ELSE '' END) HAVING COALESCE(SUM(q.submission_qty), 0) > 3 ORDER BY 2 DESC ,1; \pset title 'Top Advanced Queries by Chemical' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, chem_txt) "Rank" ,chem_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE chem_txt IS NOT NULL GROUP BY chem_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced Queries by Disease' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, disease_txt) "Rank" ,disease_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE disease_txt IS NOT NULL GROUP BY disease_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced Queries by Taxon' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, taxon_txt) "Rank" ,taxon_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE taxon_txt IS NOT NULL GROUP BY taxon_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced Queries by Gene' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, gene_txt) "Rank" ,gene_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE gene_txt IS NOT NULL GROUP BY gene_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced Queries by Gene Form' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, gene_form_type_txt) "Rank" ,gene_form_type_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE gene_form_type_txt IS NOT NULL GROUP BY gene_form_type_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced Queries by GO Term' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, go_txt) "Rank" ,go_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE go_txt IS NOT NULL GROUP BY go_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced/Batch Queries by Action Type' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, action_type_txt) "Rank" ,action_type_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE action_type_txt IS NOT NULL GROUP BY action_type_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Advanced Queries by Pathway' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, pathway_txt) "Rank" ,pathway_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE pathway_txt IS NOT NULL GROUP BY pathway_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Global Keyword Queries' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, basic_query_txt) "Rank" ,basic_query_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE basic_query_txt IS NOT NULL AND type_cd = 'all' GROUP BY basic_query_txt HAVING COUNT(*) > 1 ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Chemical Keyword Queries' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, basic_query_txt) "Rank" ,basic_query_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE basic_query_txt IS NOT NULL AND type_cd = 'chem' GROUP BY basic_query_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Disease Keyword Queries' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, basic_query_txt) "Rank" ,basic_query_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE basic_query_txt IS NOT NULL AND type_cd = 'disease' GROUP BY basic_query_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Gene Keyword Queries' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, basic_query_txt) "Rank" ,basic_query_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE basic_query_txt IS NOT NULL AND type_cd = 'gene' GROUP BY basic_query_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top GO Keyword Queries' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, basic_query_txt) "Rank" ,basic_query_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE basic_query_txt IS NOT NULL AND type_cd = 'go' GROUP BY basic_query_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Top Organism Keyword Queries' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, basic_query_txt) "Rank" ,basic_query_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE basic_query_txt IS NOT NULL AND type_cd = 'taxon' GROUP BY basic_query_txt ORDER BY 3 DESC ,2 LIMIT 25; \pset title 'Tool Queries by Year' SELECT SPLIT_PART(a.type_cd,'_',1) AS "Tool" ,EXTRACT(YEAR FROM a.query_tm) AS "Year" ,COALESCE(SUM(a.submission_qty), 0) AS "Count" FROM log_query_archive a WHERE (a.type_cd LIKE 'batch_%' OR a.type_cd LIKE 'myVenn_%' OR a.type_cd LIKE 'myGeneVenn_%' OR a.type_cd LIKE 'venn_%') GROUP BY SPLIT_PART(a.type_cd,'_',1) ,EXTRACT(YEAR FROM a.query_tm) ORDER BY 1 ,2 DESC; \pset title 'Batch Queries' SELECT REPLACE(a.type_cd, 'batch_', '') || ': ' || REPLACE(a.batch_input_type_txt, '_', ' ') "Type" ,COALESCE(SUM(a.submission_qty), 0) "Count" FROM log_query_archive a WHERE a.type_cd LIKE 'batch_%' GROUP BY a.type_cd ,a.batch_input_type_txt ORDER BY 2 DESC ,1; \pset title 'Batch Query Formats' SELECT a.results_format_txt "Format" ,COUNT( * ) "Count" FROM log_query_archive a WHERE a.type_cd LIKE 'batch_%' AND a.results_format_txt IS NOT NULL GROUP BY a.results_format_txt ORDER BY 2 DESC ,1; \pset title 'VennViewer Queries' SELECT REPLACE(a.type_cd, 'venn_', '') || ': ' || REPLACE(a.batch_input_type_txt, '_', ' ') "Type" ,COALESCE(SUM(a.submission_qty), 0) "Count" FROM log_query_archive a WHERE a.type_cd LIKE 'venn_%' GROUP BY a.type_cd ,a.batch_input_type_txt ORDER BY 2 DESC ,1; \pset title 'MyGeneVenn Queries' SELECT REPLACE(a.type_cd, 'myGeneVenn_', '') || ': ' || REPLACE(a.batch_input_type_txt, '_', ' ') "Type" ,COALESCE(SUM(a.submission_qty), 0) "Count" FROM log_query_archive a WHERE a.type_cd LIKE 'myGeneVenn_%' GROUP BY a.type_cd ,a.batch_input_type_txt ORDER BY 2 DESC ,1; \pset title 'MyVenn Queries' SELECT REPLACE(a.type_cd, 'myVenn_', '') "Type" ,COALESCE(SUM(a.submission_qty), 0) "Count" FROM log_query_archive a WHERE a.type_cd LIKE 'myVenn_%' GROUP BY a.type_cd ,a.batch_input_type_txt ORDER BY 2 DESC ,1; \pset title 'All Venn Tool Formats' SELECT a.results_format_txt "Format" ,COUNT( * ) "Count" FROM log_query_archive a WHERE (a.type_cd LIKE 'venn_%' OR a.type_cd LIKE 'myVenn_%' OR a.type_cd LIKE 'myGeneVenn_%') GROUP BY a.results_format_txt ORDER BY 2 DESC ,1; \pset title 'Top Batch/Venn Queries by Gene Ontology' SELECT RANK(*) OVER (ORDER BY COUNT(*) DESC, dag_txt) "Rank" ,dag_txt "Query" ,COUNT(*) "Count" FROM log_query_archive WHERE dag_txt IS NOT NULL GROUP BY dag_txt ORDER BY 3 DESC ,2 LIMIT 10;
Date: 2025-06-09 13:16:52 Database: ctdprd51 Application: pgAdmin 4 - CONN:7479266 User: pubc Remote:
Statement: SELECT TO_CHAR(DATE_TRUNC('year',query_tm), 'YYYY') "Year", type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive where DATE_TRUNC('year',query_tm) is 2025 GROUP BY DATE_TRUNC('year',query_tm), type_cd ORDER BY 1 DESC;
Date: 2025-06-11 11:26:58
Statement: \pset title 'Queries by Type' SELECT TO_CHAR(DATE_TRUNC('year',query_tm), 'YYYY') "Year", type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive where date_part('year',query_tm) =2024 GROUP BY DATE_TRUNC('year',query_tm), type_cd ORDER BY 1 DESC; SELECT TO_CHAR(DATE_TRUNC('year',query_tm), 'YYYY') "Year" ,COALESCE(SUM(submission_qty), 0) "Queries" FROM log_query_archive GROUP BY DATE_TRUNC('year',query_tm) ORDER BY 1 DESC; \pset title 'Queries by Type' SELECT type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive GROUP BY type_cd ORDER BY 2 DESC; SELECT type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive where date_part('year',query_tm) =2024 GROUP BY type_cd ORDER BY 2 DESC;
Date: 2025-06-11 11:36:59
28 3 ERROR: could not attach to dynamic shared area
Times Reported Most Frequent Error / Event #28
Day Hour Count Jun 11 02 1 04 2 - ERROR: could not attach to dynamic shared area
Statement: SELECT /* ReferenceCitedChemsDAO */ c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = $1 AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = $2 UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = $3 and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = $4 and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = $5 and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Date: 2025-06-11 04:33:34
29 3 ERROR: syntax error in ts"..." (...) & OR & (...) & (...)') AND t.object_type_id = 2 ) and (...)
Times Reported Most Frequent Error / Event #29
Day Hour Count Jun 08 17 3 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+417-417-1=0+0+0+1 | 3+4174171=0+0+0+1) & (-- | )" ( SELECT /* DBConstants.getContainsSQL */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+417-417-1=0+0+0+1 | 3+4174171=0+0+0+1) & (-- | )') AND t.object_type_id = 2 ) and ( t.has_exposures is true or t.has_genes is true or t.has_diseases is true or t.has_ixns is true or t.has_pathways is true or t.has_phenotypes is true or t.has_chems is true or t.has_references is true or t.has_go is true )
Statement: select distinct id from term t where id in
Date: 2025-06-08 17:41:10
30 3 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) & OR & (...) & (...)') AND c.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #30
Day Hour Count Jun 08 17 2 Jun 11 07 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+417-417-1=0+0+0+1 | 3+4174171=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereContains */ c.id FROM term c WHERE c.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+417-417-1=0+0+0+1 | 3+4174171=0+0+0+1) & (-- | )') AND c.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:41:10
31 3 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT SELECT /* IQH.getMasterPathwayWhereContains */ tp.term_id FROM term p INNER JOIN term_pathway tp ON p.id = tp.pathway_id WHERE p.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #31
Day Hour Count Jun 08 17 3 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+820-820-1=0+0+0+1 | 2+8208201=0+0+0+1) & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT SELECT /* IQH.getMasterPathwayWhereContains */ tp.term_id FROM term p INNER JOIN term_pathway tp ON p.id = tp.pathway_id WHERE p.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+820-820-1=0+0+0+1 | 2+8208201=0+0+0+1) & (-- | )') )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:59:48
32 3 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #32
Day Hour Count Jun 11 07 3 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-11 07:56:20
33 2 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #33
Day Hour Count Jun 08 17 1 Jun 11 08 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:51:59
34 2 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #34
Day Hour Count Jun 08 17 2 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+561-561-1=0+0+0+1 | 2+5615611=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+561-561-1=0+0+0+1 | 2+5615611=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:45:40
35 2 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) & OR & (...) & (...)') AND c.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #35
Day Hour Count Jun 08 17 2 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+137-137-1=0+0+0+1 | 2+1371371=0+0+0+1) & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereContains */ c.id FROM term c WHERE c.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+137-137-1=0+0+0+1 | 2+1371371=0+0+0+1) & (-- | )') AND c.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:41:15
36 2 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #36
Day Hour Count Jun 08 17 2 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+111-111-1=0+0+0+1 | 2+1111111=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+111-111-1=0+0+0+1 | 2+1111111=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:51:13
37 2 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & OR & (...) & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #37
Day Hour Count Jun 08 18 2 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+668-668-1=0+0+0+1 | 2+6686681=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+668-668-1=0+0+0+1 | 2+6686681=0+0+0+1) & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:02:22
38 2 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #38
Day Hour Count Jun 08 17 2 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:51:48
39 2 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #39
Day Hour Count Jun 08 17 2 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:55:40
40 2 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #40
Day Hour Count Jun 08 17 2 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-08 17:55:40
41 2 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #41
Day Hour Count Jun 08 17 1 Jun 11 08 1 - ERROR: syntax error in ts"FSH5CGUE & OR & 623= & SELECT & 623 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','FSH5CGUE & OR & 623= & SELECT & 623 & FROM & PG_SLEEP & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:52:25
42 2 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 13,14 ) sq
Times Reported Most Frequent Error / Event #42
Day Hour Count Jun 11 09 2 - ERROR: syntax error in ts"(-5 | 5) & OR & 563= & SELECT & 563 & FROM & PG_SLEEP & 15 & (-- | )" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 09:31:59
43 2 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #43
Day Hour Count Jun 10 23 2 44 2 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #44
Day Hour Count Jun 09 10 2 - LOG: could not send data to client: Connection reset by peer
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2025-06-09 10:39:53 Database: ctdprd51 Application: User: pubeu Remote:
45 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 13,14 ) sq LIMIT 50 OFFSET 200
Times Reported Most Frequent Error / Event #45
Day Hour Count Jun 11 09 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq LIMIT 50 OFFSET 200
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 09:28:12
46 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #46
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:46:28 Database: ctdprd51 Application: User: pubeu Remote:
47 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #47
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','GYKRQAW5 & OR & 952= & SELECT & 952 & FROM & PG_SLEEP & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:46:51
48 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:46:36.746 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:46:36.770 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #48
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"G9PTZ0CX & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','G9PTZ0CX & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:46:36.746 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:46:36.770 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:46:36
49 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:29.705 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:29.728 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #49
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"WTZDSYJH & OR & 67= & SELECT & 67 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','WTZDSYJH & OR & 67= & SELECT & 67 & FROM & PG_SLEEP & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:29.705 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:29.728 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:03:28
50 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:46:05.900 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:46:05.924 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #50
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+461-461-1=0+0+0+1 | 3+4614611=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+461-461-1=0+0+0+1 | 3+4614611=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:46:05.900 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:46:05.924 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:45:52
51 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & OR & (...) & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:02:40.970 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:47.625 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:47.648 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #51
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+783-783-1=0+0+0+1 | 3+7837831=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+783-783-1=0+0+0+1 | 3+7837831=0+0+0+1) & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:02:40.970 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:47.625 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:47.648 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:02:29
52 1 ERROR: syntax error in ts"..." FROM term d WHERE d.nm_fts @@ to_tsquery(...) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (...)') AND d.object_type_id = 3
Times Reported Most Frequent Error / Event #52
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (-- | )" FROM term d WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (-- | )') AND d.object_type_id = 3
Statement: SELECT /* IQH.getMasterDiseaseWhereContains.Disease */ d.id
Date: 2025-06-08 17:46:51
53 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #53
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+111-111-1=0+0+0+1 | 3+1111111=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+111-111-1=0+0+0+1 | 3+1111111=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+598-598-1=0+0+0+1 | 3+5985981=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:51:14
54 1 FATAL: ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount
Times Reported Most Frequent Error / Event #54
Day Hour Count Jun 08 07 1 - FATAL: ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2025-06-08 07:10:50
55 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:27.719 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:27.743 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:36.950 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:36.973 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:40.029 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:40.052 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #55
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+219-219-1=0+0+0+1 | 2+2192191=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+219-219-1=0+0+0+1 | 2+2192191=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:27.719 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:27.743 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:36.950 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:36.973 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:40.029 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:40.052 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:18
56 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:06.171 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:06.195 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #56
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"FGHLFLUH & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','FGHLFLUH & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:06.171 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:06.195 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:02:57
57 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #57
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:44
58 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:32.983 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:33.006 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #58
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+219-219-1=0+0+0+1 | 3+2192191=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+219-219-1=0+0+0+1 | 3+2192191=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:32.983 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:33.006 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:19
59 1 ERROR: syntax error in ts"..." FROM term d WHERE d.nm_fts @@ to_tsquery(...) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (...)') AND d.object_type_id = 3
Times Reported Most Frequent Error / Event #59
Day Hour Count Jun 11 07 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (-- | )" FROM term d WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (-- | )') AND d.object_type_id = 3
Statement: SELECT /* IQH.getMasterDiseaseWhereContains.Disease */ d.id
Date: 2025-06-11 07:56:28
60 1 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #60
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (-- | )" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-08 17:55:55
61 1 ERROR: < 2025-06-08 17:40:51.595 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) & OR & (...) & (...)') AND c.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #61
Day Hour Count Jun 08 17 1 - ERROR: < 2025-06-08 17:40:51.595 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereContains */ c.id FROM term c WHERE c.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+417-417-1=0+0+0+1 | 3+4174171=0+0+0+1) & (-- | )') AND c.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:41:10 Database: ctdprd51 Application: User: pubeu Remote:
62 1 ERROR: syntax error in ts"..." ,i.authors_txt authors ,i.core_citation_txt citation ,i.id ,i.acc_txt refacc ,i.isCurated ,i.pub_start_yr yr ,COUNT(...) OVER() fullRowCount FROM (...) UNION SELECT r.title ,r.authors_txt ,r.core_citation_txt ,r.id ,r.acc_txt ,r.acc_db_cd ,r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes isCurated ,r.pub_start_yr ,r.sort_txt FROM reference r WHERE r.id IN (...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE OR SUBSTR(...),1,128) LIKE ) UNION SELECT r.title ,r.authors_txt ,r.core_citation_txt ,r.id ,r.acc_txt ,r.acc_db_cd ,r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes isCurated ,r.pub_start_yr ,r.sort_txt FROM reference r WHERE r.id IN (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ) ORDER BY 9) i LIMIT 50
Times Reported Most Frequent Error / Event #62
Day Hour Count Jun 08 22 1 - ERROR: syntax error in ts"8CVTBVNZ & OR & 132= & SELECT & 132 & FROM & PG_SLEEP & 15 & (-- | )" ,i.authors_txt authors ,i.core_citation_txt citation ,i.id ,i.acc_txt refacc ,i.isCurated ,i.pub_start_yr yr ,COUNT(*) OVER() fullRowCount FROM (SELECT r.title ,r.authors_txt ,r.core_citation_txt ,r.id ,r.acc_txt ,r.acc_db_cd ,r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes isCurated ,r.pub_start_yr ,r.sort_txt FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english',) UNION SELECT r.title ,r.authors_txt ,r.core_citation_txt ,r.id ,r.acc_txt ,r.acc_db_cd ,r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes isCurated ,r.pub_start_yr ,r.sort_txt FROM reference r WHERE r.id IN (SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE OR SUBSTR(get_reference_party_nm_sort(rp.required_nm),1,128) LIKE ) UNION SELECT r.title ,r.authors_txt ,r.core_citation_txt ,r.id ,r.acc_txt ,r.acc_db_cd ,r.has_diseases or r.has_ixns or r.has_exposures or r.has_phenotypes isCurated ,r.pub_start_yr ,r.sort_txt FROM reference r WHERE r.id IN (SELECT l.object_id FROM db_link l WHERE l.type_cd = 'A' AND l.object_type_id = 7 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ) ORDER BY 9) i LIMIT 50
Statement: SELECT /* ReferenceBasicQueryDAO */ i.title
Date: 2025-06-08 22:27:38
63 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:02:55.341 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:55.365 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #63
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:02:55.341 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:55.365 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:02:51
64 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:31.885 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:31.933 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:33.388 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:33.454 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:39.902 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:39.925 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:46.821 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:46.844 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:48.733 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:48.756 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #64
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+299-299-1=0+0+0+1 | 3+2992991=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+299-299-1=0+0+0+1 | 3+2992991=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:31.885 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:31.933 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:33.388 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:33.454 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:39.902 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:39.925 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:46.821 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:46.844 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:48.733 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:48.756 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:51:28
65 1 LOG: database system was not properly shut down; automatic recovery in progress
Times Reported Most Frequent Error / Event #65
Day Hour Count Jun 14 18 1 66 1 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #66
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (-- | )" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-08 17:56:01
67 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #67
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:47:05
68 1 ERROR: operator does not exist: timestamp without time zone = integer
Times Reported Most Frequent Error / Event #68
Day Hour Count Jun 11 11 1 - ERROR: operator does not exist: timestamp without time zone = integer at character 182
Hint: No operator matches the given name and argument types. You might need to add explicit type casts.
Statement: SELECT TO_CHAR(DATE_TRUNC('year',query_tm), 'YYYY') "Year", type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive where DATE_TRUNC('year',query_tm) = 2025 GROUP BY DATE_TRUNC('year',query_tm), type_cd ORDER BY 1 DESC;Date: 2025-06-11 11:26:12
69 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #69
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:55:58
70 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 2 AND l.object_type_id = 2 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 2 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 2 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 13,14 ) sq LIMIT 50
Times Reported Most Frequent Error / Event #70
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"SU & 4312 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 2 AND l.object_type_id = 2 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 2 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 2 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq LIMIT 50
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 08:26:38
71 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #71
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:55:55
72 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #72
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','G9PTZ0CX & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:46:28
73 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:16.680 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:16.704 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #73
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+562-562-1=0+0+0+1 | 3+5625621=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+562-562-1=0+0+0+1 | 3+5625621=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:16.680 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:16.704 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+219-219-1=0+0+0+1 | 3+2192191=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:55:15
74 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:54.166 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:54.190 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #74
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:54.166 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:54.190 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:51:54
75 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (...) = ) ORDER BY 13,14 ) sq LIMIT 50
Times Reported Most Frequent Error / Event #75
Day Hour Count Jun 13 01 1 - ERROR: syntax error in ts"旭川医科大学病院 理念" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Symbol' THEN true ELSE false END isNameMatch ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE l.object_type_id = 4 AND t.object_type_id = 4 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 4 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,false isSecondaryNameMatch ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,1 relevance ,t.nm_sort ,t.id ,t.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 4 AND (upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq LIMIT 50
Statement: SELECT /* GeneBasicQueryDAO */
Date: 2025-06-13 01:53:23
76 1 ERROR: remaining connection slots are reserved for non-replication superuser connections c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN(...) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Times Reported Most Frequent Error / Event #76
Day Hour Count Jun 11 04 1 - ERROR: remaining connection slots are reserved for non-replication superuser connections c.id ,c.nm ,c.nm_html nmHtml ,c.acc_txt acc ,c.has_genes hasGenes ,c.has_diseases hasDiseases ,c.has_exposures hasExposures ,c.has_phenotypes hasPhenotypes FROM term c WHERE c.id IN( SELECT cdr.chem_id FROM chem_disease_reference cdr WHERE cdr.reference_id = AND cdr.source_cd = 'C' UNION ALL SELECT gcr.chem_id FROM gene_chem_reference gcr WHERE gcr.reference_id = UNION ALL select stressor.chem_id from exposure e ,exp_stressor stressor where e.reference_id = and e.exp_stressor_id = stressor.id UNION ALL select event.exp_marker_term_id from exposure e ,exp_event event where e.reference_id = and e.exp_event_id = event.id and event.exp_marker_type_id in ( select id from exp_marker_type where nm like 'chem%' ) UNION ALL SELECT term_id FROM phenotype_term_reference ptr WHERE ptr.reference_id = and ptr.term_object_type_id = 2) ORDER BY c.nm_sort
Context: parallel worker
Statement: SELECT /* ReferenceCitedChemsDAO */Date: 2025-06-11 04:33:32
77 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:03.120 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:03.143 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #77
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:03.120 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:03.143 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:58
78 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & 796= & SELECT & 796 & FROM & PG_SLEEP & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,t.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term t WHERE t.object_type_id = AND REGEXP_REPLACE(...)),'...','#') = ORDER BY t.nm_sort LIMIT 100
Times Reported Most Frequent Error / Event #78
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 796= & SELECT & 796 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 796= & SELECT & 796 & FROM & PG_SLEEP & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 t.nm ,t.nm_html nmHtml ,t.secondary_nm secondaryNm ,t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_exposures hasExposures ,t.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term t WHERE t.object_type_id = AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm,1,1)),'[^A-Z]','#') = ORDER BY t.nm_sort LIMIT 100
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-11 08:04:42
79 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:47:06.274 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:47:06.298 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #79
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:47:06.274 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:47:06.298 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:47:05
80 1 ERROR: value too long for type character varying(...) (...) VALUES (...) ,SUBSTR(...) ,NULLIF(...),'') , ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...),'') ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...),'') ,NULLIF(...),'') ,NULLIF(...),'') ,NULLIF(...),'') ,NULLIF(...),'') ,NULLIF(...) ,NULLIF(...) ,NULLIF(...),'') ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ,NULLIF(...) ) RETURNING id
Times Reported Most Frequent Error / Event #80
Day Hour Count Jun 10 11 1 - ERROR: value too long for type character varying(256) (type_cd ,query_tm ,submission_qty ,session_id ,server_nm ,node_nm ,remote_addr ,http_user_agent ,results_qty ,execution_ms ,gene_txt ,taxon_txt ,chem_txt ,acc_txt ,party_nm_txt ,gene_query_type ,taxon_query_type ,chem_query_type ,party_query_type ,action_type_txt ,pathway_txt ,pathway_query_type ,gene_form_type_txt ,action_degree_type_txt,go_txt ,go_query_type ,disease_txt ,disease_query_type ,gd_assn_type ,from_yr ,through_yr ,title_abstract_txt ,review_status ) VALUES ( ,CURRENT_TIMESTAMP ,1 , , ,NULLIF(,'') ,SUBSTR(,1,128) ,NULLIF(SUBSTR(,1,256),'') , ,NULLIF(,-1) ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(SUBSTR(,1,4000),'') ,NULLIF(,'') ,NULLIF(,'') ,NULLIF(,0) ,NULLIF(,0) ,NULLIF(,'') ,NULLIF(,'') ) RETURNING id
Statement: INSERT /* AdvancedQueryDAO.logQuery */ INTO pubc.log_query
Date: 2025-06-10 11:32:21
81 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:00.548 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:00.571 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #81
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 727= & SELECT & 727 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:00.548 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:00.571 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:55
82 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:24.459 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:24.482 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #82
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"LMHFSXFK & OR & 435= & SELECT & 435 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','LMHFSXFK & OR & 435= & SELECT & 435 & FROM & PG_SLEEP & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:24.459 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:24.482 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:03:23
83 1 ERROR: < 2025-06-08 17:50:21.462 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #83
Day Hour Count Jun 08 17 1 - ERROR: < 2025-06-08 17:50:21.462 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+598-598-1=0+0+0+1 | 2+5985981=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:51:19
84 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:45:31.049 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:31.073 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:32.023 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:32.047 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #84
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+349-349-1=0+0+0+1 | 2+3493491=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+349-349-1=0+0+0+1 | 2+3493491=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:45:31.049 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:31.073 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:32.023 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:32.047 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:45:30
85 1 ERROR: < 2025-06-08 17:51:28.882 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #85
Day Hour Count Jun 08 17 1 - ERROR: < 2025-06-08 17:51:28.882 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','EZJOOJNN & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:52:02
86 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & 383= & SELECT & 383 & FROM & PG_SLEEP & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:06.758 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:06.782 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #86
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 383= & SELECT & 383 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 383= & SELECT & 383 & FROM & PG_SLEEP & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:06.758 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:06.782 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:52:06
87 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #87
Day Hour Count Jun 11 07 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-11 07:56:28
88 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:19.452 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:19.499 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #88
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+598-598-1=0+0+0+1 | 2+5985981=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+598-598-1=0+0+0+1 | 2+5985981=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:19.452 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:19.499 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:51:19
89 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:54.398 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:54.421 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #89
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"5AIY4XKQ & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','5AIY4XKQ & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:54.398 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:54.421 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:49
90 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #90
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','LMHFSXFK & OR & 435= & SELECT & 435 & FROM & PG_SLEEP & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 18:02:46
91 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:57.086 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:57.110 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #91
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:57.086 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:57.110 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:51:48
92 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:34.681 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:34.705 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:47.110 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:47.309 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #92
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:34.681 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:34.705 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:47.110 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:47.309 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:52:34
93 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-11 08:09:01.653 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-11 08:09:01.677 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #93
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-11 08:09:01.653 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-11 08:09:01.677 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-11 08:09:00
94 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:22.599 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:22.623 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:47.872 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:47.895 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #94
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+562-562-1=0+0+0+1 | 2+5625621=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+562-562-1=0+0+0+1 | 2+5625621=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:22.599 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:22.623 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:47.872 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:47.895 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:14
95 1 LOG: database system was interrupted; last known up at ...
Times Reported Most Frequent Error / Event #95
Day Hour Count Jun 14 18 1 96 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) & OR & (...) & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:35.674 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:35.721 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:51.467 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:51.491 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #96
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+598-598-1=0+0+0+1 | 3+5985981=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+598-598-1=0+0+0+1 | 3+5985981=0+0+0+1) & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:51:35.674 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:35.721 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:51.467 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:51.491 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:51:21 Database: ctdprd51 Application: User: pubeu Remote:
97 1 ERROR: syntax error in ts"..." FROM term d WHERE d.nm_fts @@ to_tsquery(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND d.object_type_id = 3
Times Reported Most Frequent Error / Event #97
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" FROM term d WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND d.object_type_id = 3
Statement: SELECT /* IQH.getMasterDiseaseWhereContains.Disease */ d.id
Date: 2025-06-08 17:46:28
98 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:38.413 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:38.436 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #98
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"QEW8O2NN & OR & 399= & SELECT & 399 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','QEW8O2NN & OR & 399= & SELECT & 399 & FROM & PG_SLEEP & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:03:38.413 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:03:38.436 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:03:33
99 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & OR & (...) & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,(...) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (...) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,(...) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,(...) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,(...) ) as receptorRace ,(...) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,(...) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,(...) ) as stateOrProvince ,(...) ) as localityTxt ,(...) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,(...) ) as studyFactorNms ,(...) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(...) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = or receptorTerm.id = GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50< 2025-06-08 18:02:38.338 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:38.362 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #99
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+613-613-1=0+0+0+1 | 3+6136131=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+613-613-1=0+0+0+1 | 3+6136131=0+0+0+1) & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,stressorTerm.nm_html as chemNmHtml ,stressorTerm.nm_sort as chemNmSort ,stressorTerm.acc_txt as chemAcc ,( SELECT STRING_AGG( distinct stressorSrcType.nm || '^' || stressorSrcType.cd,'|' ) ) as stressorSrcTypeNm ,stressor.src_details as stressorSrcDetails ,stressor.sample_qty as stressorSampleQty ,stressor.note as stressorNote ,receptor.qty as nbrReceptors ,receptor.description as receptors ,receptor.note as receptorNotes ,receptorTerm.nm || '^' || (select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms ,( SELECT STRING_AGG( distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct,' | ' ) ) as smokerStatus ,receptor.age as ageRange ,receptor.age_uom_nm as ageUOMNm ,receptor.age_qualifier_nm as ageQualifierNm ,receptor.gender_nm as genderNmSearch ,receptor.id receptorID ,( SELECT STRING_AGG ( pct || '^' || gender_nm || '^' || gender_nm_html, '|' ) from exp_receptor_gender where exp_receptor_id = receptor.id ) as genderDetails ,( SELECT STRING_AGG( DISTINCT receptorRace.race_nm || '^' || receptorRace.pct,' | ' ) ) as receptorRace ,( SELECT STRING_AGG( DISTINCT eventAssayMethod.nm ,' | ' ) ) as assayMethods ,event.medium_nm as medium ,event.medium_term_acc_txt as mediumAccTxt ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr ,event.detection_limit as detectionLimit ,event.detection_limit_uom as detectionLimitUOM ,event.detection_freq as detectionFreq ,event.note as eventNote ,( SELECT STRING_AGG( DISTINCT eventLocation.geographic_region_nm,' | ' ) ) as stateOrProvince ,( SELECT STRING_AGG( DISTINCT eventLocation.locality_txt,' | ' ) ) as localityTxt ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers ,event.exp_marker_lvl as assayLevel ,assay_uom as measurement ,assay_measurement_stat as measurementStat ,assay_note as assayNote ,eiot.description as outcomeRltnp ,diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField ,phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField ,outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm ,e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,r.abbr_authors_txt as abbrAuthorsTxt ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,outcome.note as outcomeNote ,eventLocation.exp_event_id as eventID ,COUNT(*) OVER() fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where exposureMarkerTerm.id = or receptorTerm.id = GROUP BY chemNm ,chemNmHtml ,chemNmSort ,chemAcc ,stressorSrcDetails ,stressorSampleQty ,stressorNote ,receptorTerms ,medium ,mediumAccTxt ,assayedMarkers ,assayLevel ,measurement ,measurementStat ,assayNote ,outcomeRltnp ,diseaseField ,phenotypeField ,phenotypeActionDegreeTypeNm ,ref ,r.abbr_authors_txt ,collectionStartAndEndYr ,receptorID ,detectionLimit ,detectionLimitUOM ,detectionFreq ,eventNote ,outcomeNote ,eventID order by chemNmSort LIMIT 50< 2025-06-08 18:02:38.338 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:02:38.362 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 18:02:19
100 1 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #100
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (-- | )" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 662= & SELECT & 662 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-08 17:55:58
101 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:45:44.160 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:44.183 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #101
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+349-349-1=0+0+0+1 | 3+3493491=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+349-349-1=0+0+0+1 | 3+3493491=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:45:44.160 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:44.183 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:45:34
102 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:26.119 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:26.142 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #102
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"FSH5CGUE & OR & 623= & SELECT & 623 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','FSH5CGUE & OR & 623= & SELECT & 623 & FROM & PG_SLEEP & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:26.119 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:26.142 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:52:25
103 1 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #103
Day Hour Count Jun 09 06 1 - ERROR: relation "disease_chem_gene" does not exist at character 369
Statement: SELECT /* DiseaseIxnsDAO */ dcg.chem_id chemid ,c.nm chemnm ,c.nm_html chemnmhtml ,c.acc_txt chemacc ,c.secondary_nm casRN ,dcg.gene_id geneid ,g.nm genesymbol ,g.acc_txt geneacc ,dcg.ixn_id ixnId ,i.ixn_prose_txt ixnProse ,i.ixn_prose_html ixnProseHtml ,i.actions_txt ixnActions ,dcg.reference_qty refCount ,dcg.taxon_qty taxonCount FROM disease_chem_gene dcg INNER JOIN ixn i ON dcg.ixn_id = i.id INNER JOIN term g ON dcg.gene_id = g.id INNER JOIN term c ON dcg.chem_id = c.id WHERE dcg.disease_id = $1 AND g.object_type_id = 4 AND c.object_type_id = 2 ORDER BY g.nm_sort ,c.nm_sort LIMIT 50
Date: 2025-06-09 06:33:27
104 1 ERROR: < 2025-06-08 17:51:34.020 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:34.075 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:43.715 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:43.738 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:49.467 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:49.491 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) & OR & 383= & SELECT & 383 & FROM & PG_SLEEP & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #104
Day Hour Count Jun 08 17 1 - ERROR: < 2025-06-08 17:51:34.020 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:34.075 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:43.715 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:43.738 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:49.467 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:51:49.491 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 383= & SELECT & 383 & FROM & PG_SLEEP & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:52:06
105 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = AND l.db_id = (...) ) ORDER BY 13,14 ) sq
Times Reported Most Frequent Error / Event #105
Day Hour Count Jun 11 09 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = AND l.db_id = (SELECT id FROM db WHERE cd = ) ) ORDER BY 13,14 ) sq
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 09:49:02
106 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #106
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & 592= & SELECT & 592 & FROM & PG_SLEEP & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:46:51 Database: ctdprd51 Application: User: pubeu Remote:
107 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 2 AND l.object_type_id = 2 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 2 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 2 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 13,14 ) sq LIMIT 50
Times Reported Most Frequent Error / Event #107
Day Hour Count Jun 11 10 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 2 AND l.object_type_id = 2 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 2 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 2 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq LIMIT 50
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 10:27:32
108 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #108
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:56:01
109 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM dag_node n INNER JOIN term_label l ON l.term_id = n.object_id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id INNER JOIN dag d ON n.dag_id = d.id WHERE l.object_type_id = 5 AND l.id IN(...) OVER (...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 5 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* acc */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,n.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,d.nm rankNm ,1 relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN dag_node n ON l.object_id = n.object_id INNER JOIN dag d ON n.dag_id = d.id WHERE l.type_cd = 'A' AND l.object_type_id = 5 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 9, 10 ) sq LIMIT 50 OFFSET 50
Times Reported Most Frequent Error / Event #109
Day Hour Count Jun 11 11 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 28= & SELECT & 28 & FROM & PG_SLEEP & 15 & (-- | )" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,l.nm matchednm ,lt.nm_display matchedtype ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,d.nm rankNm ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM dag_node n INNER JOIN term_label l ON l.term_id = n.object_id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id INNER JOIN dag d ON n.dag_id = d.id WHERE l.object_type_id = 5 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER (PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 5 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* acc */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,n.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,d.nm rankNm ,1 relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN dag_node n ON l.object_id = n.object_id INNER JOIN dag d ON n.dag_id = d.id WHERE l.type_cd = 'A' AND l.object_type_id = 5 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 9, 10 ) sq LIMIT 50 OFFSET 50
Statement: SELECT /* GoBasicQueryDAO */
Date: 2025-06-11 11:14:18
110 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:45:50.964 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:50.987 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #110
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (2+461-461-1=0+0+0+1 | 2+4614611=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+461-461-1=0+0+0+1 | 2+4614611=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:45:50.964 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:45:50.987 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:45:49
111 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM dag_node n INNER JOIN term_label l ON l.term_id = n.object_id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id INNER JOIN dag d ON n.dag_id = d.id WHERE l.object_type_id = 5 AND l.id IN(...) OVER (...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 5 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* acc */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,n.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,d.nm rankNm ,1 relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN dag_node n ON l.object_id = n.object_id INNER JOIN dag d ON n.dag_id = d.id WHERE l.type_cd = 'A' AND l.object_type_id = 5 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 9, 10 ) sq
Times Reported Most Frequent Error / Event #111
Day Hour Count Jun 11 11 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 440= & SELECT & 440 & FROM & PG_SLEEP & 15 & (-- | )" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,l.nm matchednm ,lt.nm_display matchedtype ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,d.nm rankNm ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM dag_node n INNER JOIN term_label l ON l.term_id = n.object_id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id INNER JOIN dag d ON n.dag_id = d.id WHERE l.object_type_id = 5 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER (PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 5 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* acc */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,n.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,d.nm rankNm ,1 relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN dag_node n ON l.object_id = n.object_id INNER JOIN dag d ON n.dag_id = d.id WHERE l.type_cd = 'A' AND l.object_type_id = 5 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 9, 10 ) sq
Statement: SELECT /* GoBasicQueryDAO */
Date: 2025-06-11 11:13:07
112 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & OR & (...) & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #112
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+668-668-1=0+0+0+1 | 3+6686681=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+668-668-1=0+0+0+1 | 3+6686681=0+0+0+1) & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50 ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* AdvancedGeneQueryDAO.getData */SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 18:02:25
113 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 13,14 ) sq
Times Reported Most Frequent Error / Event #113
Day Hour Count Jun 11 09 1 - ERROR: syntax error in ts"OCJMDLLQ & OR & 325= & SELECT & 325 & FROM & PG_SLEEP & 15 & (-- | )" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 09:32:02
114 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #114
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"FNKIWNS2 & OR & 342= & SELECT & 342 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','FNKIWNS2 & OR & 342= & SELECT & 342 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:56:06
115 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #115
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-11 08:09:34
116 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:05.023 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:05.046 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #116
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"6IMSA4FV & OR & 744= & SELECT & 744 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','6IMSA4FV & OR & 744= & SELECT & 744 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:05.023 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:05.046 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:56:04
117 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:44.138 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:44.161 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #117
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:44.138 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:44.161 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:40
118 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN(...) OVER(...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 13,14 ) sq
Times Reported Most Frequent Error / Event #118
Day Hour Count Jun 11 09 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 13,14 ) sq
Statement: SELECT /* MeshBasicQueryDAO */
Date: 2025-06-11 09:32:01
119 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:47:03.568 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:47:03.591 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #119
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"GYKRQAW5 & OR & 952= & SELECT & 952 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','GYKRQAW5 & OR & 952= & SELECT & 952 & FROM & PG_SLEEP & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:47:03.568 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:47:03.591 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:46:56
120 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) & OR & 796= & SELECT & 796 & FROM & PG_SLEEP & 15 & (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #120
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 796= & SELECT & 796 & FROM & PG_SLEEP & 15 & (-- | )" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 796= & SELECT & 796 & FROM & PG_SLEEP & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-11 08:04:42
121 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) & WAITFOR & DELAY & 0 & 0 & 15 & (...)') AND t.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:05:49.499 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:05:49.523 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:05:54.087 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:05:54.111 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,(...) ) as studyFactorNms ,(...) ) as associatedStudyTitles ,(...) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,(...) || '^' || COALESCE(...), '' ) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || COALESCE(...) || '^' || receptor.description ,'|' ) ) as receptors ,(...) ) as studyCountries ,(...) ) as localities ,(...),' | ' ) ) as assayMediums ,(...) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,(...) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,(...) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,(...) ) as anatomyTerms ,re.author_summary summary ,COUNT(...) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY (...) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1 ,term t ,exp_event event1 where t.id in (...) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in (...) and event1.id = e1.exp_event_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Times Reported Most Frequent Error / Event #121
Day Hour Count Jun 08 18 1 - ERROR: syntax error in ts"(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereContains */ t.id FROM term t WHERE t.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND t.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 18:05:49.499 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:05:49.523 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:05:54.087 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 18:05:54.111 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored r.abbr_authors_txt || '^' || r.pub_start_yr as ref ,( SELECT STRING_AGG( DISTINCT expStudyFactor.study_factor_nm,' | ' ) ) as studyFactorNms ,( SELECT STRING_AGG( DISTINCT eventProject.project_nm ,' | ' ) ) as associatedStudyTitles ,( SELECT STRING_AGG( distinct stressorTerm.nm || '^' || (select cd from object_type where id = stressorTerm.object_type_id ) || '^' || stressorTerm.nm_html || '^' || stressorTerm.acc_txt || '^' || stressorTerm.acc_db_cd ,'|' ) ) as stressorAgents ,( SELECT STRING_AGG( distinct COALESCE(receptorTerm.nm, '' ) || '^' || COALESCE( (select cd from object_type where id = receptorTerm.object_type_id ), '' ) || '^' || COALESCE( receptorTerm.nm_html, '' ) || '^' || COALESCE( receptorTerm.acc_txt, '' ) || '^' || COALESCE( receptorTerm.acc_db_cd, '' ) || '^' || receptor.description ,'|' ) ) as receptors ,( SELECT STRING_AGG( distinct country.nm,' | ' ) ) as studyCountries ,( SELECT STRING_AGG( distinct location.locality_txt,' | ' ) ) as localities ,( SELECT STRING_AGG( distinct event.medium_nm || '^' || COALESCE( event.medium_term_acc_txt, '' ),' | ' ) ) as assayMediums ,( SELECT STRING_AGG( distinct exposureMarkerTerm.nm || '^' || (select cd from object_type where id = exposureMarkerTerm.object_type_id ) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd ,'|' ) ) as assayedMarkers ,( SELECT STRING_AGG( distinct diseaseTerm.nm || '^' || (select cd from object_type where id = diseaseTerm.object_type_id ) || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd ,'|' ) ) as diseases ,( SELECT STRING_AGG( distinct phenotypeTerm.nm || '^' || (select cd from object_type where id = phenotypeTerm.object_type_id ) || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd ,'|' ) ) as phenotypes ,( SELECT STRING_AGG( distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|' ) ) as anatomyTerms ,re.author_summary summary ,COUNT(*) OVER() fullRowCount FROM exposure e inner join reference r ON e.reference_id = r.id inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id left outer join exp_event event ON e.exp_event_id = event.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join exp_event_location location ON e.exp_event_id = location.exp_event_id left outer join country ON location.country_id = country.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id inner join reference_exp re ON e.reference_id = re.reference_id left outer join exp_study_factor expStudyFactor on re.id = expStudyFactor.reference_exp_id where e.reference_id = ANY ( ARRAY ( select reference_id from exposure e1 ,term chem ,exp_stressor s1 where chem.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and chem.id = s1.chem_id and s1.id = e1.exp_stressor_id union select reference_id from exposure e1 ,term t ,exp_event event1 where t.id in ( select descendant_object_id from dag_path where ancestor_object_id = ) and t.id = event1.exp_marker_term_id and event1.exp_marker_type_id in ( select id from exp_marker_type where nm like ) and event1.id = e1.exp_event_id ) ) group by e.reference_acc_txt ,r.abbr_authors_txt ,pub_start_yr ,re.author_summary order by stressorAgents LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 18:02:48
122 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...)') AND gi.object_type_id = 4 INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:03.315 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:03.341 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #122
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"EZJOOJNN & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY (SELECT /* CIQH.getIxnGeneWhereContains */ gi.id FROM term gi WHERE gi.nm_fts @@ to_tsquery('common.english_nostops','EZJOOJNN & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND gi.object_type_id = 4 INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:52:03.315 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:52:03.341 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:52:02
123 1 ERROR: syntax error in ts"..." FROM term d WHERE d.nm_fts @@ to_tsquery(...) AND d.object_type_id = 3
Times Reported Most Frequent Error / Event #123
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" FROM term d WHERE d.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND d.object_type_id = 3
Statement: SELECT /* IQH.getMasterDiseaseWhereContains.Disease */ d.id
Date: 2025-06-08 17:47:05
124 1 ERROR: syntax error in ts"..." sq.* ,COUNT(...) OVER() fullRowCount FROM (...) = THEN 1 ELSE 2 END relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM dag_node n INNER JOIN term_label l ON l.term_id = n.object_id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id INNER JOIN dag d ON n.dag_id = d.id WHERE l.object_type_id = 5 AND l.id IN(...) OVER (...) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 5 AND i.nm_fts @@ to_tsquery(...) ) UNION ALL SELECT /* acc */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,n.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,d.nm rankNm ,1 relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN dag_node n ON l.object_id = n.object_id INNER JOIN dag d ON n.dag_id = d.id WHERE l.type_cd = 'A' AND l.object_type_id = 5 AND (...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = OR upper(...) = ) ORDER BY 9, 10 ) sq
Times Reported Most Frequent Error / Event #124
Day Hour Count Jun 11 11 1 - ERROR: syntax error in ts"ZDKOEUDJ & OR & 79= & SELECT & 79 & FROM & PG_SLEEP & 15 & (-- | )" sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,l.nm matchednm ,lt.nm_display matchedtype ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,d.nm rankNm ,CASE WHEN UPPER(l.nm) = THEN 1 ELSE 2 END relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM dag_node n INNER JOIN term_label l ON l.term_id = n.object_id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id INNER JOIN dag d ON n.dag_id = d.id WHERE l.object_type_id = 5 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER (PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 5 AND i.nm_fts @@ to_tsquery('common.english_nostops', ) ) UNION ALL SELECT /* acc */ n.acc_txt acc ,n.acc_txt accQueryStr ,n.nm ,n.nm_html nmHtml ,n.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,d.nm rankNm ,1 relevance ,n.nm_sort ,n.object_id id ,n.has_genes hasGenes ,n.has_diseases hasDiseases ,n.has_exposures hasExposures ,n.has_phenotypes hasPhenotypes FROM db_link l INNER JOIN dag_node n ON l.object_id = n.object_id INNER JOIN dag d ON n.dag_id = d.id WHERE l.type_cd = 'A' AND l.object_type_id = 5 AND (upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = OR upper( l.acc_txt ) = ) ORDER BY 9, 10 ) sq
Statement: SELECT /* GoBasicQueryDAO */
Date: 2025-06-11 11:13:09
125 1 ERROR: < 2025-06-08 17:56:24.178 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:24.201 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT SELECT /* IQH.getMasterPathwayWhereContains */ tp.term_id FROM term p INNER JOIN term_pathway tp ON p.id = tp.pathway_id WHERE p.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #125
Day Hour Count Jun 08 17 1 - ERROR: < 2025-06-08 17:56:24.178 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:24.201 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT SELECT /* IQH.getMasterPathwayWhereContains */ tp.term_id FROM term p INNER JOIN term_pathway tp ON p.id = tp.pathway_id WHERE p.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+566-566-1=0+0+0+1 | 2+5665661=0+0+0+1) & (-- | )') )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:59:40
126 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:02.099 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:02.122 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:28.500 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:28.524 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:36.189 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:36.212 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #126
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & 352= & SELECT & 352 & FROM & PG_SLEEP & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:02.099 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:02.122 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:28.500 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:28.524 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:36.189 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:36.212 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:56:01
127 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) & OR & (...) & (...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:12.715 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:12.739 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #127
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"(-1 | 1) & OR & (3+304-304-1=0+0+0+1 | 3+3043041=0+0+0+1) & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (3+304-304-1=0+0+0+1 | 3+3043041=0+0+0+1) & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:55:12.715 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:55:12.739 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:11
128 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...)') AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:08.103 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:08.126 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Times Reported Most Frequent Error / Event #128
Day Hour Count Jun 08 17 1 - ERROR: syntax error in ts"1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & WAITFOR & DELAY & 0 & 0 & 15 & (-- | )') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50< 2025-06-08 17:56:08.103 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:56:08.126 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-08 17:55:46
129 1 ERROR: < 2025-06-08 17:42:30.636 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:42:30.659 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:43:26.932 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:43:26.956 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & (...) & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #129
Day Hour Count Jun 08 17 1 - ERROR: < 2025-06-08 17:42:30.636 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:42:30.659 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:43:26.932 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored< 2025-06-08 17:43:26.956 EDT >NOTICE: text-search query contains only stop words or doesn't contain lexemes, ignored ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-1 | 1) & OR & (2+349-349-1=0+0+0+1 | 2+3493491=0+0+0+1) & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-08 17:45:30 Database: ctdprd51 Application: User: pubeu Remote:
130 1 ERROR: syntax error in ts"..." g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(...) OVER() fullRowCount FROM term g WHERE g.id IN (...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT (...) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery(...) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (...)') AND gd.curated_reference_qty > 0 INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Times Reported Most Frequent Error / Event #130
Day Hour Count Jun 11 07 1 - ERROR: syntax error in ts"(-5 | 5) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (-- | )" g.id geneId ,g.acc_txt acc ,g.nm nm ,g.nm nmHtml ,g.secondary_nm secondaryNm ,g.has_chems hasChems ,g.has_diseases hasDiseases ,g.has_exposures hasExposures ,g.has_phenotypes hasPhenotypes ,COUNT(*) OVER() fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT (SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN term_label li ON li.term_id = pi.ancestor_object_id WHERE UPPER(li.nm) LIKE '1' AND li.object_type_id = 5 ) INTERSECT SELECT /* IQH.getMasterDiseaseWhereContains.Gene */ gd.gene_id FROM term d INNER JOIN gene_disease gd ON d.id = gd.disease_id WHERE d.nm_fts @@ to_tsquery('common.english_nostops','(-5 | 5) & OR & 910= & SELECT & 910 & FROM & PG_SLEEP & 15 & (-- | )') AND gd.curated_reference_qty > 0 INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') ) ) ORDER BY g.nm_sort, g.id LIMIT 50
Statement: SELECT /* AdvancedGeneQueryDAO.getData */
Date: 2025-06-11 07:56:28
131 1 ERROR: syntax error in ts"..." ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(...) ) ) AND gcr.gene_id = ANY (...) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(...) AND g.object_type_id = 5 ) INTERSECT (...) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (...) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (...) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (...) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(...) )
Times Reported Most Frequent Error / Event #131
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" ,gcr.chem_id ,gcr.gene_id ,gcr.taxon_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS(SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN( SELECT tc.nm FROM actor_form_type tp ,actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein' ) ) ) AND gcr.gene_id = ANY (ARRAY ((SELECT /* CIQH.getIxnGeneWhereEquals.Label */ gli.term_id gene_id FROM term_label gli WHERE gli.object_type_id = 4 AND UPPER(gli.nm) LIKE '1' ) INTERSECT SELECT /* IQH.getMasterGoWhereContains.Gene */ ai.gene_id FROM gene_go_annot ai WHERE ai.go_term_id IN(SELECT g.id FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND g.object_type_id = 5 ) INTERSECT (SELECT /* IQH.getMasterDiseaseWhereEquals.Label.Gene */ gd.gene_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 3 AND gd.curated_reference_qty > 0 ) INTERSECT (SELECT /* IQH.getMasterPathwayWhereEquals.Name */ tp.term_id FROM term_pathway tp WHERE UPPER(tp.pathway_nm) LIKE '/' AND tp.object_type_id = 4 ) )) AND gcr.chem_id = ANY (ARRAY (SELECT /* CIQH.getIxnChemWhereEquals.Label */ dp.descendant_object_id FROM dag_path dp INNER JOIN term_label l ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 2 )) AND gcr.taxon_id = ANY (ARRAY (SELECT /* CIQH.getIxnTaxonWhereEquals.Label */ dp.descendant_object_id FROM term_label l INNER JOIN dag_path dp ON l.term_id = dp.ancestor_object_id WHERE UPPER(l.nm) LIKE '1' AND l.object_type_id = 1 )) AND gcr.id IN(SELECT gcra.gene_chem_reference_id FROM gene_chem_reference_axn gcra WHERE (gcra.action_degree_type_nm = 'increases') )
Statement: SELECT /* CIQH.getIxnCacheQuery */ gcr.ixn_id
Date: 2025-06-11 08:09:34
132 1 ERROR: syntax error in ts"..." FROM term g WHERE g.nm_fts @@ to_tsquery(...) AND g.object_type_id = 5 ORDER BY 1
Times Reported Most Frequent Error / Event #132
Day Hour Count Jun 11 08 1 - ERROR: syntax error in ts"1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||" FROM term g WHERE g.nm_fts @@ to_tsquery('common.english_nostops','1 & DBMS_PIPE.RECEIVE_MESSAGE & CHR & 98 & CHR & 98 & CHR & 98 & ,15 & ||') AND g.object_type_id = 5 ORDER BY 1
Statement: SELECT /* IQH.getMasterGoWhereContains.GO */ g.id
Date: 2025-06-11 08:09:34
133 1 ERROR: column "..." must appear in the GROUP BY clause or be used in an aggregate function
Times Reported Most Frequent Error / Event #133
Day Hour Count Jun 11 11 1 - ERROR: column "log_query_archive.type_cd" must appear in the GROUP BY clause or be used in an aggregate function at character 9
Statement: SELECT type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive where date_part('year',query_tm) =2024
Date: 2025-06-11 11:33:08
134 1 ERROR: invalid input syntax for type timestamp: ...
Times Reported Most Frequent Error / Event #134
Day Hour Count Jun 11 11 1 - ERROR: invalid input syntax for type timestamp: "2025" at character 187
Statement: SELECT TO_CHAR(DATE_TRUNC('year',query_tm), 'YYYY') "Year", type_cd "Type" ,COALESCE(SUM(submission_qty), 0) "Count" FROM log_query_archive where DATE_TRUNC('year',query_tm) in ('2025') GROUP BY DATE_TRUNC('year',query_tm), type_cd ORDER BY 1 DESC;
Date: 2025-06-11 11:27:42