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Global information
- Generated on Sat Jan 10 04:15:03 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260109
- Parsed 17,969 log entries in 2s
- Log start from 2026-01-09 00:00:01 to 2026-01-09 23:59:12
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Overview
Global Stats
- 63 Number of unique normalized queries
- 126 Number of queries
- 2h3m9s Total query duration
- 2026-01-09 00:09:10 First query
- 2026-01-09 23:15:08 Last query
- 1 queries/s at 2026-01-09 19:43:24 Query peak
- 2h3m9s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 2h3m9s Execute total duration
- 3 Number of events
- 1 Number of unique normalized events
- 3 Max number of times the same event was reported
- 0 Number of cancellation
- 9 Total number of automatic vacuums
- 21 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 2,162 Total number of sessions
- 75 sessions at 2026-01-09 11:34:15 Session peak
- 40d2h40m55s Total duration of sessions
- 26m42s Average duration of sessions
- 0 Average queries per session
- 3s418ms Average queries duration per session
- 26m39s Average idle time per session
- 2,166 Total number of connections
- 18 connections/s at 2026-01-09 11:39:26 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-01-09 19:43:24 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-01-09 09:20:05 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-01-09 19:43:24 Date
Queries duration
Key values
- 2h3m9s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 09 00 4 0ms 9m9s 2m21s 0ms 11s188ms 9m15s 01 1 0ms 16s129ms 16s129ms 0ms 0ms 16s129ms 02 2 0ms 5s670ms 5s619ms 0ms 5s568ms 5s670ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 1 0ms 5s370ms 5s370ms 0ms 0ms 5s370ms 05 2 0ms 5s306ms 5s260ms 0ms 5s214ms 5s306ms 06 11 0ms 1m50s 21s74ms 0ms 39s675ms 2m5s 07 1 0ms 12s657ms 12s657ms 0ms 0ms 12s657ms 08 4 0ms 12s160ms 12s39ms 11s932ms 12s97ms 12s160ms 09 8 0ms 12s427ms 9s244ms 11s128ms 11s937ms 12s427ms 10 12 0ms 1m50s 19s345ms 11s23ms 39s62ms 1m50s 11 2 0ms 5s141ms 5s115ms 0ms 0ms 10s231ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 2 0ms 5s404ms 5s368ms 0ms 0ms 10s737ms 14 9 0ms 1m50s 24s101ms 20s760ms 46s293ms 1m50s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 40 0ms 26m12s 1m18s 1m51s 2m10s 26m12s 19 22 0ms 26m13s 2m5s 1m22s 2m11s 26m13s 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 1 0ms 5s867ms 5s867ms 0ms 0ms 5s867ms 22 3 0ms 29s698ms 13s476ms 0ms 10s729ms 29s698ms 23 1 0ms 5s440ms 5s440ms 0ms 0ms 5s440ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 09 00 3 0 3m6s 0ms 0ms 9m9s 01 1 0 16s129ms 0ms 0ms 16s129ms 02 2 0 5s619ms 0ms 0ms 5s670ms 03 0 0 0ms 0ms 0ms 0ms 04 1 0 5s370ms 0ms 0ms 5s370ms 05 2 0 5s260ms 0ms 0ms 5s306ms 06 2 9 21s74ms 0ms 14s975ms 1m50s 07 1 0 12s657ms 0ms 0ms 12s657ms 08 4 0 12s39ms 0ms 11s932ms 12s160ms 09 8 0 9s244ms 0ms 11s128ms 12s427ms 10 3 9 19s345ms 0ms 11s23ms 1m50s 11 2 0 5s115ms 0ms 0ms 10s231ms 12 0 0 0ms 0ms 0ms 0ms 13 2 0 5s368ms 0ms 0ms 10s737ms 14 0 9 24s101ms 0ms 20s760ms 1m50s 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 40 1m18s 1m2s 1m51s 26m12s 19 0 22 2m5s 44s627ms 1m22s 26m13s 20 0 0 0ms 0ms 0ms 0ms 21 1 0 5s867ms 0ms 0ms 5s867ms 22 3 0 13s476ms 0ms 0ms 29s698ms 23 1 0 5s440ms 0ms 0ms 5s440ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 09 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jan 09 00 0 2 2.00 0.00% 01 0 1 1.00 0.00% 02 0 2 2.00 0.00% 03 0 0 0.00 0.00% 04 0 1 1.00 0.00% 05 0 2 2.00 0.00% 06 0 2 2.00 0.00% 07 0 1 1.00 0.00% 08 0 4 4.00 0.00% 09 0 8 8.00 0.00% 10 0 3 3.00 0.00% 11 0 2 2.00 0.00% 12 0 0 0.00 0.00% 13 0 2 2.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 1 1.00 0.00% 22 0 3 3.00 0.00% 23 0 1 1.00 0.00% Day Hour Count Average / Second Jan 09 00 82 0.02/s 01 79 0.02/s 02 81 0.02/s 03 84 0.02/s 04 80 0.02/s 05 97 0.03/s 06 87 0.02/s 07 79 0.02/s 08 81 0.02/s 09 80 0.02/s 10 78 0.02/s 11 301 0.08/s 12 74 0.02/s 13 77 0.02/s 14 78 0.02/s 15 73 0.02/s 16 90 0.03/s 17 83 0.02/s 18 90 0.03/s 19 79 0.02/s 20 77 0.02/s 21 75 0.02/s 22 82 0.02/s 23 79 0.02/s Day Hour Count Average Duration Average idle time Jan 09 00 82 29m17s 29m10s 01 79 30m39s 30m39s 02 81 30m8s 30m8s 03 84 27m43s 27m43s 04 80 30m50s 30m50s 05 97 26m 26m 06 87 27m9s 27m6s 07 79 30m38s 30m38s 08 81 29m2s 29m1s 09 80 29m52s 29m51s 10 78 30m49s 30m46s 11 301 8m5s 8m5s 12 74 32m3s 32m3s 13 77 30m56s 30m56s 14 78 31m8s 31m5s 15 73 31m12s 31m12s 16 86 27m36s 27m36s 17 83 28m30s 28m30s 18 89 27m34s 26m59s 19 80 31m40s 31m6s 20 77 31m16s 31m16s 21 75 30m25s 30m25s 22 82 29m54s 29m54s 23 79 31m21s 31m21s -
Connections
Established Connections
Key values
- 18 connections Connection Peak
- 2026-01-09 11:39:26 Date
Connections per database
Key values
- ctdprd51 Main Database
- 2,166 connections Total
Connections per user
Key values
- pubeu Main User
- 2,166 connections Total
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Sessions
Simultaneous sessions
Key values
- 75 sessions Session Peak
- 2026-01-09 11:34:15 Date
Histogram of session times
Key values
- 1,788 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 2,162 sessions Total
Sessions per user
Key values
- pubeu Main User
- 2,162 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 2,162 sessions Total
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Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 53,936 buffers Checkpoint Peak
- 2026-01-09 04:19:10 Date
- 1619.545 seconds Highest write time
- 0.003 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-01-09 03:23:57 Date
Checkpoints distance
Key values
- 1,108.79 Mo Distance Peak
- 2026-01-09 04:19:10 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jan 09 00 907 91.044s 0.003s 91.116s 01 245 24.716s 0.002s 24.746s 02 7,041 705.029s 0.003s 705.122s 03 1,062 106.462s 0.001s 106.479s 04 54,315 1,657.682s 0.004s 1,657.876s 05 1,394 139.809s 0.003s 139.89s 06 46,153 1,635.999s 0.003s 1,636.156s 07 124 12.584s 0.002s 12.614s 08 1,670 167.436s 0.004s 167.515s 09 3,558 356.466s 0.003s 356.546s 10 608 61.104s 0.005s 61.138s 11 480 48.255s 0.003s 48.334s 12 28 2.975s 0.002s 3.006s 13 131 13.293s 0.002s 13.323s 14 143 14.495s 0.002s 14.527s 15 776 77.892s 0.003s 77.925s 16 189 19.113s 0.002s 19.143s 17 227 22.911s 0.002s 22.943s 18 42 4.379s 0.002s 4.41s 19 1,687 169.133s 0.003s 169.213s 20 26 2.786s 0.002s 2.816s 21 136 13.792s 0.002s 13.824s 22 56 5.772s 0.002s 5.803s 23 3,202 320.771s 0.003s 320.855s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jan 09 00 0 0 0 71 0.001s 0.002s 01 0 0 0 47 0.001s 0.002s 02 0 5 0 50 0.001s 0.002s 03 0 0 0 29 0.001s 0.001s 04 0 35 0 64 0.001s 0.003s 05 0 1 0 41 0.001s 0.002s 06 0 28 0 140 0.001s 0.002s 07 0 0 0 68 0.001s 0.002s 08 0 1 0 127 0.001s 0.002s 09 0 1 0 73 0.001s 0.002s 10 0 0 0 127 0.001s 0.002s 11 0 1 0 78 0.001s 0.002s 12 0 0 0 15 0.001s 0.002s 13 0 0 0 59 0.001s 0.002s 14 0 0 0 61 0.001s 0.002s 15 0 0 0 94 0.001s 0.002s 16 0 0 0 93 0.001s 0.002s 17 0 0 0 100 0.001s 0.002s 18 0 0 0 24 0.001s 0.002s 19 0 1 0 39 0.001s 0.002s 20 0 0 0 14 0.001s 0.002s 21 0 0 0 27 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 2 0 30 0.001s 0.002s Day Hour Count Avg time (sec) Jan 09 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jan 09 00 3,580.50 kB 14,252.50 kB 01 669.00 kB 11,811.50 kB 02 38,507.50 kB 71,663.50 kB 03 7,023.00 kB 61,884.00 kB 04 189,716.33 kB 512,882.00 kB 05 5,457.00 kB 394,283.00 kB 06 230,053.50 kB 436,381.50 kB 07 275.50 kB 353,553.50 kB 08 4,974.50 kB 287,116.00 kB 09 13,871.50 kB 235,392.50 kB 10 1,789.00 kB 190,917.50 kB 11 1,288.50 kB 154,976.00 kB 12 50.50 kB 125,559.50 kB 13 324.00 kB 101,738.00 kB 14 253.00 kB 82,482.00 kB 15 2,605.50 kB 67,104.00 kB 16 509.00 kB 54,628.50 kB 17 636.00 kB 44,376.50 kB 18 65.00 kB 35,975.00 kB 19 3,776.00 kB 29,632.50 kB 20 54.00 kB 24,235.50 kB 21 271.50 kB 19,680.50 kB 22 120.50 kB 15,964.00 kB 23 16,202.00 kB 22,976.50 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jan 09 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 1.60 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-01-09 06:20:44 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 1.60 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-01-09 06:20:44 Date
Analyzes per table
Key values
- pubc.log_query (15) Main table analyzed (database ctdprd51)
- 21 analyzes Total
Vacuums per table
Key values
- pub2.term_set_enrichment (3) Main table vacuumed on database ctdprd51
- 9 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pub2.term_set_enrichment 3 0 2,145 0 629 0 0 929 6 98,920 ctdprd51.pub2.term_set_enrichment_agent 2 0 82,247 0 7,548 0 0 41,039 5 2,453,264 ctdprd51.pubc.log_query 2 2 458 0 70 0 0 140 52 360,421 ctdprd51.pub2.term_comp_agent 1 0 231 0 74 0 0 71 2 18,892 ctdprd51.pg_catalog.pg_statistic 1 1 675 0 167 0 118 428 143 566,392 Total 9 3 85,756 87 8,488 0 118 42,607 208 3,497,889 Tuples removed per table
Key values
- pg_catalog.pg_statistic (547) Main table with removed tuples on database ctdprd51
- 567 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_catalog.pg_statistic 1 1 547 3,318 0 0 410 ctdprd51.pubc.log_query 2 2 20 1,353 0 0 58 ctdprd51.pub2.term_set_enrichment 3 0 0 267,114 0 0 4,410 ctdprd51.pub2.term_comp_agent 1 0 0 12,738 0 0 113 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 11,885,777 0 0 135,067 Total 9 3 567 12,170,300 0 0 140,058 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pub2.term_set_enrichment 3 0 0 0 ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 0 ctdprd51.pubc.log_query 2 2 20 0 ctdprd51.pg_catalog.pg_statistic 1 1 547 0 Total 9 3 567 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jan 09 00 1 1 01 0 4 02 1 1 03 2 4 04 1 2 05 1 3 06 1 3 07 0 0 08 1 1 09 0 0 10 0 0 11 0 1 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 1 0 20 0 0 21 0 1 22 0 0 23 0 0 - 1.60 sec Highest CPU-cost vacuum
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Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
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Queries
Queries by type
Key values
- 36 Total read queries
- 89 Total write queries
Queries by database
Key values
- unknown Main database
- 85 Requests
- 1h40m38s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 176 Requests
User Request type Count Duration editeu Total 10 1m58s select 10 1m58s postgres Total 18 17m45s copy to 18 17m45s pubc Total 1 9m9s select 1 9m9s pubeu Total 57 23m37s select 57 23m37s qaeu Total 2 10s588ms select 2 10s588ms unknown Total 176 3h24m11s copy to 159 3h20m4s others 1 6s491ms select 16 4m Duration by user
Key values
- 3h24m11s (unknown) Main time consuming user
User Request type Count Duration editeu Total 10 1m58s select 10 1m58s postgres Total 18 17m45s copy to 18 17m45s pubc Total 1 9m9s select 1 9m9s pubeu Total 57 23m37s select 57 23m37s qaeu Total 2 10s588ms select 2 10s588ms unknown Total 176 3h24m11s copy to 159 3h20m4s others 1 6s491ms select 16 4m Queries by host
Key values
- unknown Main host
- 264 Requests
- 4h16m52s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 116 Requests
- 1h45m7s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-01-09 09:49:09 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 77 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 26m13s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-01-09 19:29:50 ]
2 26m12s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-01-09 18:43:38 ]
3 9m9s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-09 00:09:10 - Database: ctdprd51 - User: pubc - Application: psql ]
4 7m31s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-01-09 19:42:48 ]
5 7m27s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-01-09 18:56:30 ]
6 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-09 18:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
7 1m50s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-09 06:06:52 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
8 1m50s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-09 19:45:45 ]
9 1m50s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-09 14:06:52 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
10 1m50s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-09 10:06:52 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
11 1m40s COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-01-09 18:47:04 ]
12 1m40s COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-01-09 19:33:16 ]
13 1m23s COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-01-09 18:58:20 ]
14 1m13s COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-01-09 18:15:06 ]
15 1m13s COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-01-09 19:01:16 ]
16 1m4s COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-01-09 18:16:12 ]
17 1m4s COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-01-09 19:02:21 ]
18 54s372ms COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-01-09 18:13:44 ]
19 54s171ms COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-01-09 18:59:54 ]
20 44s627ms COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-01-09 19:34:35 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 26m13s 1 26m13s 26m13s 26m13s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 09 19 1 26m13s 26m13s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-09 19:29:50 Duration: 26m13s
2 26m12s 1 26m12s 26m12s 26m12s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 09 18 1 26m12s 26m12s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-09 18:43:38 Duration: 26m12s
3 9m13s 5 1m50s 1m51s 1m50s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jan 09 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m51s 1m51s 19 1 1m50s 1m50s [ User: postgres - Total duration: 7m23s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 7m23s - Times executed: 4 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 18:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 06:06:52 Duration: 1m50s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 19:45:45 Duration: 1m50s
4 9m9s 1 9m9s 9m9s 9m9s select maint_query_logs_archive ();Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jan 09 00 1 9m9s 9m9s [ User: pubc - Total duration: 9m9s - Times executed: 1 ]
[ Application: psql - Total duration: 9m9s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-09 00:09:10 Duration: 9m9s Database: ctdprd51 User: pubc Application: psql
5 7m31s 1 7m31s 7m31s 7m31s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jan 09 19 1 7m31s 7m31s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 19:42:48 Duration: 7m31s
6 7m27s 1 7m27s 7m27s 7m27s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jan 09 18 1 7m27s 7m27s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 18:56:30 Duration: 7m27s
7 1m59s 5 23s688ms 24s173ms 23s888ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jan 09 06 1 24s173ms 24s173ms 10 1 23s688ms 23s688ms 14 1 23s802ms 23s802ms 18 1 23s903ms 23s903ms 19 1 23s874ms 23s874ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 06:07:17 Duration: 24s173ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 18:07:17 Duration: 23s903ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 19:46:09 Duration: 23s874ms
8 1m58s 10 9s171ms 12s657ms 11s818ms select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.ixn_actor a left outer join pub2.term t on a.acc_txt = t.acc_txt and a.object_type_id = t.object_type_id inner join edit.object_type o on a.object_type_id = o.id inner join edit.ixn i on a.ixn_id = i.id inner join edit.reference_ixn ri on i.root_id = ri.ixn_id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.object_nm) <> upper(t.nm) or t.nm is null) union select distinct i.root_id, edit.get_ixn_prose (i.root_id), ?, a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, ?, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.reference_ixn_anatomy a left outer join pub2.term t on a.anatomy_acc_txt = t.acc_txt and t.object_type_id = ? inner join edit.reference_ixn ri on a.reference_ixn_id = ri.id inner join edit.ixn i on ri.ixn_id = i.id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.anatomy_nm) <> upper(t.nm) or t.nm is null) union select e.id, ?, ?, etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_anatomy etn left outer join pub2.term t on etn.anatomy_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.exp_outcome_id where (upper(etn.anatomy_term_nm) <> upper(t.nm) or t.nm is null) and anatomy_acc_txt is not null and anatomy_acc_txt <> ? union select e.id, ?, ?, etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_stressor etn left outer join pub2.term t on etn.chem_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_stressor_id = etn.id where (upper(etn.chem_term_nm) <> upper(t.nm) or t.nm is null) and chem_acc_txt is not null and chem_acc_txt <> ? union select e.id, ?, ?, etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.disease_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.disease_term_nm) <> upper(t.nm) or t.nm is null) and disease_acc_txt is not null and disease_acc_txt <> ? union select e.id, ?, ?, etn.phenotype_acc_txt as term_acc_txt, etn.phenotype_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.phenotype_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.phenotype_term_nm) <> upper(t.nm) or t.nm is null) and phenotype_acc_txt is not null and phenotype_acc_txt <> ? union select e.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_receptor etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.object_type_id = t.object_type_id inner join edit.object_type o on etn.object_type_id = o.id inner join edit.exposure e on e.exp_receptor_id = etn.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and term_acc_txt is not null and term_acc_txt <> ? union select etn.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, ?, ?, ?, ? from edit.medium etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.term_object_type_id = t.object_type_id inner join edit.object_type o on etn.term_object_type_id = o.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and etn.term_acc_txt is not null and etn.term_acc_txt <> ? union select etn.id, ?, o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_event etn inner join edit.exp_marker_type emt on etn.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on etn.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id inner join edit.exposure e on e.exp_event_id = etn.id where (upper(etn.exp_marker_term_nm) <> upper(t.nm) or t.nm is null) and etn.exp_marker_acc_txt is not null and exp_marker_acc_txt <> ? order by term_nm, term_acc_txt;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jan 09 07 1 12s657ms 12s657ms 08 4 48s156ms 12s39ms 09 5 57s369ms 11s473ms [ User: editeu - Total duration: 1m58s - Times executed: 10 ]
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 07:57:54 Duration: 12s657ms Database: ctdprd51 User: editeu Bind query: yes
-
select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 09:24:55 Duration: 12s427ms Database: ctdprd51 User: editeu Bind query: yes
-
select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 08:32:58 Duration: 12s160ms Database: ctdprd51 User: editeu Bind query: yes
9 1m40s 1 1m40s 1m40s 1m40s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jan 09 18 1 1m40s 1m40s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-01-09 18:47:04 Duration: 1m40s
10 1m40s 1 1m40s 1m40s 1m40s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jan 09 19 1 1m40s 1m40s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-01-09 19:33:16 Duration: 1m40s
11 1m33s 17 5s316ms 5s867ms 5s509ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jan 09 00 2 11s188ms 5s594ms 02 2 11s238ms 5s619ms 04 1 5s370ms 5s370ms 09 3 16s582ms 5s527ms 10 3 16s500ms 5s500ms 13 2 10s737ms 5s368ms 21 1 5s867ms 5s867ms 22 2 10s729ms 5s364ms 23 1 5s440ms 5s440ms [ User: pubeu - Total duration: 1m17s - Times executed: 14 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1359558' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-09 21:54:55 Duration: 5s867ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1314493' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-09 02:05:45 Duration: 5s670ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1445819' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-09 00:28:18 Duration: 5s665ms Database: ctdprd51 User: pubeu Bind query: yes
12 1m29s 5 17s885ms 18s116ms 17s968ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jan 09 06 1 17s922ms 17s922ms 10 1 17s896ms 17s896ms 14 1 18s116ms 18s116ms 18 2 35s907ms 17s953ms [ User: postgres - Total duration: 1m29s - Times executed: 5 ]
[ Application: pg_dump - Total duration: 1m29s - Times executed: 5 ]
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:20 Duration: 18s116ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:20 Duration: 18s22ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 06:00:20 Duration: 17s922ms Database: ctdprd51 User: postgres Application: pg_dump
13 1m23s 1 1m23s 1m23s 1m23s copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jan 09 18 1 1m23s 1m23s -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 18:58:20 Duration: 1m23s
14 1m17s 5 15s373ms 15s662ms 15s463ms copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jan 09 06 1 15s501ms 15s501ms 10 1 15s373ms 15s373ms 14 1 15s398ms 15s398ms 18 1 15s662ms 15s662ms 19 1 15s381ms 15s381ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 18:07:32 Duration: 15s662ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 06:07:32 Duration: 15s501ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 14:07:31 Duration: 15s398ms
15 1m13s 1 1m13s 1m13s 1m13s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jan 09 18 1 1m13s 1m13s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-01-09 18:15:06 Duration: 1m13s
16 1m13s 1 1m13s 1m13s 1m13s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jan 09 19 1 1m13s 1m13s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-01-09 19:01:16 Duration: 1m13s
17 1m12s 5 14s413ms 14s740ms 14s538ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jan 09 06 1 14s413ms 14s413ms 10 1 14s426ms 14s426ms 14 1 14s740ms 14s740ms 18 2 29s109ms 14s554ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:51 Duration: 14s740ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:10:50 Duration: 14s561ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:50 Duration: 14s547ms
18 1m12s 5 14s355ms 14s458ms 14s410ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jan 09 06 1 14s355ms 14s355ms 10 1 14s392ms 14s392ms 14 1 14s391ms 14s391ms 18 2 28s911ms 14s455ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:01:05 Duration: 14s458ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:11:05 Duration: 14s453ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 10:01:04 Duration: 14s392ms
19 1m4s 1 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jan 09 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-01-09 18:16:12 Duration: 1m4s
20 1m4s 1 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jan 09 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-01-09 19:02:21 Duration: 1m4s
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 17 1m33s 5s316ms 5s867ms 5s509ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 09 00 2 11s188ms 5s594ms 02 2 11s238ms 5s619ms 04 1 5s370ms 5s370ms 09 3 16s582ms 5s527ms 10 3 16s500ms 5s500ms 13 2 10s737ms 5s368ms 21 1 5s867ms 5s867ms 22 2 10s729ms 5s364ms 23 1 5s440ms 5s440ms [ User: pubeu - Total duration: 1m17s - Times executed: 14 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1359558' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-09 21:54:55 Duration: 5s867ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1314493' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-09 02:05:45 Duration: 5s670ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1445819' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-09 00:28:18 Duration: 5s665ms Database: ctdprd51 User: pubeu Bind query: yes
2 10 1m58s 9s171ms 12s657ms 11s818ms select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.ixn_actor a left outer join pub2.term t on a.acc_txt = t.acc_txt and a.object_type_id = t.object_type_id inner join edit.object_type o on a.object_type_id = o.id inner join edit.ixn i on a.ixn_id = i.id inner join edit.reference_ixn ri on i.root_id = ri.ixn_id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.object_nm) <> upper(t.nm) or t.nm is null) union select distinct i.root_id, edit.get_ixn_prose (i.root_id), ?, a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, ?, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.reference_ixn_anatomy a left outer join pub2.term t on a.anatomy_acc_txt = t.acc_txt and t.object_type_id = ? inner join edit.reference_ixn ri on a.reference_ixn_id = ri.id inner join edit.ixn i on ri.ixn_id = i.id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.anatomy_nm) <> upper(t.nm) or t.nm is null) union select e.id, ?, ?, etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_anatomy etn left outer join pub2.term t on etn.anatomy_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.exp_outcome_id where (upper(etn.anatomy_term_nm) <> upper(t.nm) or t.nm is null) and anatomy_acc_txt is not null and anatomy_acc_txt <> ? union select e.id, ?, ?, etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_stressor etn left outer join pub2.term t on etn.chem_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_stressor_id = etn.id where (upper(etn.chem_term_nm) <> upper(t.nm) or t.nm is null) and chem_acc_txt is not null and chem_acc_txt <> ? union select e.id, ?, ?, etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.disease_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.disease_term_nm) <> upper(t.nm) or t.nm is null) and disease_acc_txt is not null and disease_acc_txt <> ? union select e.id, ?, ?, etn.phenotype_acc_txt as term_acc_txt, etn.phenotype_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.phenotype_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.phenotype_term_nm) <> upper(t.nm) or t.nm is null) and phenotype_acc_txt is not null and phenotype_acc_txt <> ? union select e.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_receptor etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.object_type_id = t.object_type_id inner join edit.object_type o on etn.object_type_id = o.id inner join edit.exposure e on e.exp_receptor_id = etn.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and term_acc_txt is not null and term_acc_txt <> ? union select etn.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, ?, ?, ?, ? from edit.medium etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.term_object_type_id = t.object_type_id inner join edit.object_type o on etn.term_object_type_id = o.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and etn.term_acc_txt is not null and etn.term_acc_txt <> ? union select etn.id, ?, o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_event etn inner join edit.exp_marker_type emt on etn.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on etn.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id inner join edit.exposure e on e.exp_event_id = etn.id where (upper(etn.exp_marker_term_nm) <> upper(t.nm) or t.nm is null) and etn.exp_marker_acc_txt is not null and exp_marker_acc_txt <> ? order by term_nm, term_acc_txt;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 09 07 1 12s657ms 12s657ms 08 4 48s156ms 12s39ms 09 5 57s369ms 11s473ms [ User: editeu - Total duration: 1m58s - Times executed: 10 ]
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 07:57:54 Duration: 12s657ms Database: ctdprd51 User: editeu Bind query: yes
-
select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 09:24:55 Duration: 12s427ms Database: ctdprd51 User: editeu Bind query: yes
-
select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 08:32:58 Duration: 12s160ms Database: ctdprd51 User: editeu Bind query: yes
3 5 9m13s 1m50s 1m51s 1m50s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jan 09 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m51s 1m51s 19 1 1m50s 1m50s [ User: postgres - Total duration: 7m23s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 7m23s - Times executed: 4 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 18:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 06:06:52 Duration: 1m50s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 19:45:45 Duration: 1m50s
4 5 1m59s 23s688ms 24s173ms 23s888ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jan 09 06 1 24s173ms 24s173ms 10 1 23s688ms 23s688ms 14 1 23s802ms 23s802ms 18 1 23s903ms 23s903ms 19 1 23s874ms 23s874ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 06:07:17 Duration: 24s173ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 18:07:17 Duration: 23s903ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 19:46:09 Duration: 23s874ms
5 5 1m29s 17s885ms 18s116ms 17s968ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jan 09 06 1 17s922ms 17s922ms 10 1 17s896ms 17s896ms 14 1 18s116ms 18s116ms 18 2 35s907ms 17s953ms [ User: postgres - Total duration: 1m29s - Times executed: 5 ]
[ Application: pg_dump - Total duration: 1m29s - Times executed: 5 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:20 Duration: 18s116ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:20 Duration: 18s22ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 06:00:20 Duration: 17s922ms Database: ctdprd51 User: postgres Application: pg_dump
6 5 1m17s 15s373ms 15s662ms 15s463ms copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jan 09 06 1 15s501ms 15s501ms 10 1 15s373ms 15s373ms 14 1 15s398ms 15s398ms 18 1 15s662ms 15s662ms 19 1 15s381ms 15s381ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 18:07:32 Duration: 15s662ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 06:07:32 Duration: 15s501ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 14:07:31 Duration: 15s398ms
7 5 1m12s 14s413ms 14s740ms 14s538ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jan 09 06 1 14s413ms 14s413ms 10 1 14s426ms 14s426ms 14 1 14s740ms 14s740ms 18 2 29s109ms 14s554ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:51 Duration: 14s740ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:10:50 Duration: 14s561ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:50 Duration: 14s547ms
8 5 1m12s 14s355ms 14s458ms 14s410ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jan 09 06 1 14s355ms 14s355ms 10 1 14s392ms 14s392ms 14 1 14s391ms 14s391ms 18 2 28s911ms 14s455ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:01:05 Duration: 14s458ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:11:05 Duration: 14s453ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 10:01:04 Duration: 14s392ms
9 5 36s212ms 7s206ms 7s303ms 7s242ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jan 09 06 1 7s206ms 7s206ms 10 1 7s228ms 7s228ms 14 1 7s241ms 7s241ms 18 2 14s535ms 7s267ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:29 Duration: 7s303ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:29 Duration: 7s241ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:10:29 Duration: 7s231ms
10 5 31s856ms 6s327ms 6s471ms 6s371ms copy edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jan 09 06 1 6s329ms 6s329ms 10 1 6s327ms 6s327ms 14 1 6s369ms 6s369ms 18 2 12s829ms 6s414ms -
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:01:13 Duration: 6s471ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:01:13 Duration: 6s369ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:11:13 Duration: 6s358ms
11 5 30s228ms 5s981ms 6s194ms 6s45ms copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jan 09 06 1 5s981ms 5s981ms 10 1 5s998ms 5s998ms 14 1 6s194ms 6s194ms 18 2 12s53ms 6s26ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:36 Duration: 6s194ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:35 Duration: 6s31ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:10:35 Duration: 6s21ms
12 2 10s521ms 5s214ms 5s306ms 5s260ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jan 09 05 2 10s521ms 5s260ms [ User: pubeu - Total duration: 5s306ms - Times executed: 1 ]
[ User: qaeu - Total duration: 5s214ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1332236)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-01-09 05:48:44 Duration: 5s306ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1332236)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-01-09 05:43:40 Duration: 5s214ms Database: ctdprd51 User: qaeu Bind query: yes
13 2 10s231ms 5s90ms 5s141ms 5s115ms select t.nm, t.nm_html nmhtml, t.secondary_nm secondarynm, t.acc_txt acc, ? || t.nm accquerystr, t.has_chems haschems, t.has_diseases hasdiseases, t.has_exposures hasexposures, t.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term t where t.object_type_id = ? and regexp_replace(upper(substring(t.nm, ?, ?)), ?, ?) = ? order by t.nm_sort limit ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jan 09 11 2 10s231ms 5s115ms [ User: pubeu - Total duration: 10s231ms - Times executed: 2 ]
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2026-01-09 11:39:32 Duration: 5s141ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GeneBrowseTermsDAO */ t.nm, t.nm_html nmHtml, t.secondary_nm secondaryNm, t.acc_txt acc, 'name:' || t.nm accQueryStr, t.has_chems hasChems, t.has_diseases hasDiseases, t.has_exposures hasExposures, t.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term t WHERE t.object_type_id = '4' AND REGEXP_REPLACE(UPPER(SUBSTRING(t.nm, 1, 1)), '[^A-Z]', '#') = 'A' ORDER BY t.nm_sort LIMIT 100;
Date: 2026-01-09 11:39:31 Duration: 5s90ms Database: ctdprd51 User: pubeu Bind query: yes
14 1 26m13s 26m13s 26m13s 26m13s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jan 09 19 1 26m13s 26m13s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-09 19:29:50 Duration: 26m13s
15 1 26m12s 26m12s 26m12s 26m12s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jan 09 18 1 26m12s 26m12s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-09 18:43:38 Duration: 26m12s
16 1 9m9s 9m9s 9m9s 9m9s select maint_query_logs_archive ();Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jan 09 00 1 9m9s 9m9s [ User: pubc - Total duration: 9m9s - Times executed: 1 ]
[ Application: psql - Total duration: 9m9s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-09 00:09:10 Duration: 9m9s Database: ctdprd51 User: pubc Application: psql
17 1 7m31s 7m31s 7m31s 7m31s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jan 09 19 1 7m31s 7m31s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 19:42:48 Duration: 7m31s
18 1 7m27s 7m27s 7m27s 7m27s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jan 09 18 1 7m27s 7m27s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 18:56:30 Duration: 7m27s
19 1 1m40s 1m40s 1m40s 1m40s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jan 09 18 1 1m40s 1m40s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-01-09 18:47:04 Duration: 1m40s
20 1 1m40s 1m40s 1m40s 1m40s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jan 09 19 1 1m40s 1m40s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-01-09 19:33:16 Duration: 1m40s
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 26m13s 26m13s 26m13s 1 26m13s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 09 19 1 26m13s 26m13s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-09 19:29:50 Duration: 26m13s
2 26m12s 26m12s 26m12s 1 26m12s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 09 18 1 26m12s 26m12s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-09 18:43:38 Duration: 26m12s
3 9m9s 9m9s 9m9s 1 9m9s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jan 09 00 1 9m9s 9m9s [ User: pubc - Total duration: 9m9s - Times executed: 1 ]
[ Application: psql - Total duration: 9m9s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-09 00:09:10 Duration: 9m9s Database: ctdprd51 User: pubc Application: psql
4 7m31s 7m31s 7m31s 1 7m31s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jan 09 19 1 7m31s 7m31s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 19:42:48 Duration: 7m31s
5 7m27s 7m27s 7m27s 1 7m27s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jan 09 18 1 7m27s 7m27s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 18:56:30 Duration: 7m27s
6 1m50s 1m51s 1m50s 5 9m13s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jan 09 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m51s 1m51s 19 1 1m50s 1m50s [ User: postgres - Total duration: 7m23s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 7m23s - Times executed: 4 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 18:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 06:06:52 Duration: 1m50s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 19:45:45 Duration: 1m50s
7 1m40s 1m40s 1m40s 1 1m40s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jan 09 18 1 1m40s 1m40s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-01-09 18:47:04 Duration: 1m40s
8 1m40s 1m40s 1m40s 1 1m40s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jan 09 19 1 1m40s 1m40s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-01-09 19:33:16 Duration: 1m40s
9 1m23s 1m23s 1m23s 1 1m23s copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jan 09 18 1 1m23s 1m23s -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-09 18:58:20 Duration: 1m23s
10 1m13s 1m13s 1m13s 1 1m13s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jan 09 18 1 1m13s 1m13s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-01-09 18:15:06 Duration: 1m13s
11 1m13s 1m13s 1m13s 1 1m13s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jan 09 19 1 1m13s 1m13s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-01-09 19:01:16 Duration: 1m13s
12 1m4s 1m4s 1m4s 1 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jan 09 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-01-09 18:16:12 Duration: 1m4s
13 1m4s 1m4s 1m4s 1 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jan 09 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-01-09 19:02:21 Duration: 1m4s
14 23s688ms 24s173ms 23s888ms 5 1m59s copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jan 09 06 1 24s173ms 24s173ms 10 1 23s688ms 23s688ms 14 1 23s802ms 23s802ms 18 1 23s903ms 23s903ms 19 1 23s874ms 23s874ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 06:07:17 Duration: 24s173ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 18:07:17 Duration: 23s903ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-09 19:46:09 Duration: 23s874ms
15 17s885ms 18s116ms 17s968ms 5 1m29s copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jan 09 06 1 17s922ms 17s922ms 10 1 17s896ms 17s896ms 14 1 18s116ms 18s116ms 18 2 35s907ms 17s953ms [ User: postgres - Total duration: 1m29s - Times executed: 5 ]
[ Application: pg_dump - Total duration: 1m29s - Times executed: 5 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:20 Duration: 18s116ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:20 Duration: 18s22ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 06:00:20 Duration: 17s922ms Database: ctdprd51 User: postgres Application: pg_dump
16 15s373ms 15s662ms 15s463ms 5 1m17s copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jan 09 06 1 15s501ms 15s501ms 10 1 15s373ms 15s373ms 14 1 15s398ms 15s398ms 18 1 15s662ms 15s662ms 19 1 15s381ms 15s381ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 18:07:32 Duration: 15s662ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 06:07:32 Duration: 15s501ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-09 14:07:31 Duration: 15s398ms
17 14s413ms 14s740ms 14s538ms 5 1m12s copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jan 09 06 1 14s413ms 14s413ms 10 1 14s426ms 14s426ms 14 1 14s740ms 14s740ms 18 2 29s109ms 14s554ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:51 Duration: 14s740ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:10:50 Duration: 14s561ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:50 Duration: 14s547ms
18 14s355ms 14s458ms 14s410ms 5 1m12s copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jan 09 06 1 14s355ms 14s355ms 10 1 14s392ms 14s392ms 14 1 14s391ms 14s391ms 18 2 28s911ms 14s455ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:01:05 Duration: 14s458ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:11:05 Duration: 14s453ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 10:01:04 Duration: 14s392ms
19 9s171ms 12s657ms 11s818ms 10 1m58s select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.ixn_actor a left outer join pub2.term t on a.acc_txt = t.acc_txt and a.object_type_id = t.object_type_id inner join edit.object_type o on a.object_type_id = o.id inner join edit.ixn i on a.ixn_id = i.id inner join edit.reference_ixn ri on i.root_id = ri.ixn_id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.object_nm) <> upper(t.nm) or t.nm is null) union select distinct i.root_id, edit.get_ixn_prose (i.root_id), ?, a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, ?, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, ?), taxon.nm from edit.reference_ixn_anatomy a left outer join pub2.term t on a.anatomy_acc_txt = t.acc_txt and t.object_type_id = ? inner join edit.reference_ixn ri on a.reference_ixn_id = ri.id inner join edit.ixn i on ri.ixn_id = i.id left outer join pub2.term taxon on ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = ? where (upper(a.anatomy_nm) <> upper(t.nm) or t.nm is null) union select e.id, ?, ?, etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_anatomy etn left outer join pub2.term t on etn.anatomy_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.exp_outcome_id where (upper(etn.anatomy_term_nm) <> upper(t.nm) or t.nm is null) and anatomy_acc_txt is not null and anatomy_acc_txt <> ? union select e.id, ?, ?, etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_stressor etn left outer join pub2.term t on etn.chem_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_stressor_id = etn.id where (upper(etn.chem_term_nm) <> upper(t.nm) or t.nm is null) and chem_acc_txt is not null and chem_acc_txt <> ? union select e.id, ?, ?, etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.disease_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.disease_term_nm) <> upper(t.nm) or t.nm is null) and disease_acc_txt is not null and disease_acc_txt <> ? union select e.id, ?, ?, etn.phenotype_acc_txt as term_acc_txt, etn.phenotype_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_outcome etn left outer join pub2.term t on etn.phenotype_acc_txt = t.acc_txt and ? = t.object_type_id inner join edit.object_type o on ? = o.id inner join edit.exposure e on e.exp_outcome_id = etn.id where (upper(etn.phenotype_term_nm) <> upper(t.nm) or t.nm is null) and phenotype_acc_txt is not null and phenotype_acc_txt <> ? union select e.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_receptor etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.object_type_id = t.object_type_id inner join edit.object_type o on etn.object_type_id = o.id inner join edit.exposure e on e.exp_receptor_id = etn.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and term_acc_txt is not null and term_acc_txt <> ? union select etn.id, ?, o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, ?, t.nm, t.acc_txt, ?, ?, ?, ? from edit.medium etn left outer join pub2.term t on etn.term_acc_txt = t.acc_txt and etn.term_object_type_id = t.object_type_id inner join edit.object_type o on etn.term_object_type_id = o.id where (upper(etn.term_nm) <> upper(t.nm) or t.nm is null) and etn.term_acc_txt is not null and etn.term_acc_txt <> ? union select etn.id, ?, o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, ?, t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, ?), ? from edit.exp_event etn inner join edit.exp_marker_type emt on etn.exp_marker_type_id = emt.id inner join edit.object_type o on emt.object_type_id = o.id left outer join pub2.term t on etn.exp_marker_acc_txt = t.acc_txt and o.id = t.object_type_id inner join edit.exposure e on e.exp_event_id = etn.id where (upper(etn.exp_marker_term_nm) <> upper(t.nm) or t.nm is null) and etn.exp_marker_acc_txt is not null and exp_marker_acc_txt <> ? order by term_nm, term_acc_txt;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jan 09 07 1 12s657ms 12s657ms 08 4 48s156ms 12s39ms 09 5 57s369ms 11s473ms [ User: editeu - Total duration: 1m58s - Times executed: 10 ]
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 07:57:54 Duration: 12s657ms Database: ctdprd51 User: editeu Bind query: yes
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 09:24:55 Duration: 12s427ms Database: ctdprd51 User: editeu Bind query: yes
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select distinct i.root_id, edit.get_ixn_prose (i.root_id), o.cd, a.acc_txt as term_acc_txt, a.object_nm as term_nm, a.seq_acc_txt, t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.IXN_ACTOR a LEFT OUTER JOIN pub2.TERM t ON a.acc_txt = t.acc_txt AND a.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON a.object_type_id = o.id INNER JOIN edit.IXN i ON a.ixn_id = i.id INNER JOIN edit.REFERENCE_IXN ri ON i.root_id = ri.ixn_id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.object_nm) <> upper(t.nm) OR t.nm is null) UNION select distinct i.root_id, edit.get_ixn_prose (i.root_id), 'anatomy', a.anatomy_acc_txt as term_acc_txt, a.anatomy_nm as term_nm, '', t.nm, t.acc_txt, ri.reference_acc_txt, ri.create_by, to_char(ri.create_tm, 'mm-dd-yyyy'), taxon.nm from edit.REFERENCE_IXN_ANATOMY a LEFT OUTER JOIN pub2.TERM t ON a.anatomy_acc_txt = t.acc_txt AND t.object_type_id = 10 INNER JOIN edit.REFERENCE_IXN ri ON a.reference_ixn_id = ri.id INNER JOIN edit.IXN i ON ri.ixn_id = i.id LEFT OUTER JOIN pub2.TERM taxon ON ri.taxon_acc_txt = taxon.acc_txt and taxon.object_type_id = 1 WHERE (upper(a.anatomy_nm) <> upper(t.nm) OR t.nm is null) UNION select e.id, '', 'anatomy', etn.anatomy_acc_txt as term_acc_txt, etn.anatomy_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_ANATOMY etn LEFT OUTER JOIN pub2.TERM t ON etn.anatomy_acc_txt = t.acc_txt AND 10 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 10 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.exp_outcome_id WHERE (upper(etn.anatomy_term_nm) <> upper(t.nm) OR t.nm is null) and anatomy_acc_txt is not null AND anatomy_acc_txt <> '' UNION select e.id, '', 'chem', etn.chem_acc_txt as term_acc_txt, etn.chem_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_STRESSOR etn LEFT OUTER JOIN pub2.TERM t ON etn.chem_acc_txt = t.acc_txt AND 2 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 2 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_stressor_id = etn.id WHERE (upper(etn.chem_term_nm) <> upper(t.nm) OR t.nm is null) and chem_acc_txt is not null AND chem_acc_txt <> '' UNION select e.id, '', 'disease', etn.disease_acc_txt as term_acc_txt, etn.disease_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.disease_acc_txt = t.acc_txt AND 3 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 3 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.disease_term_nm) <> upper(t.nm) OR t.nm is null) and disease_acc_txt is not null AND disease_acc_txt <> '' UNION select e.id, '', 'go', etn.phenotype_acc_txt as term_acc_txt, etn.PHENOTYPE_TERM_NM as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_OUTCOME etn LEFT OUTER JOIN pub2.TERM t ON etn.phenotype_acc_txt = t.acc_txt AND 5 = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON 5 = o.id INNER JOIN edit.EXPOSURE e ON e.exp_outcome_id = etn.id WHERE (upper(etn.PHENOTYPE_TERM_NM) <> upper(t.nm) OR t.nm is null) and phenotype_acc_txt is not null AND phenotype_acc_txt <> '' UNION select e.id, '', o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_RECEPTOR etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.object_type_id = o.id INNER JOIN edit.EXPOSURE e ON e.exp_receptor_id = etn.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and term_acc_txt is not null AND term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.term_acc_txt as term_acc_txt, etn.term_nm as term_nm, 'Medium Record - No Seq', t.nm, t.acc_txt, '', -- reference accession '', -- create_by '', -- create_tm 'Medium Record - no Taxon' from edit.MEDIUM etn LEFT OUTER JOIN pub2.TERM t ON etn.term_acc_txt = t.acc_txt AND etn.term_object_type_id = t.object_type_id INNER JOIN edit.OBJECT_TYPE o ON etn.term_object_type_id = o.id WHERE (upper(etn.term_nm) <> upper(t.nm) OR t.nm is null) and etn.term_acc_txt is not null AND etn.term_acc_txt <> '' UNION select etn.id, '', -- Ixn txt o.cd, etn.exp_marker_acc_txt as term_acc_txt, etn.exp_marker_term_nm as term_nm, 'Exposure Record - No Seq', t.nm, t.acc_txt, e.reference_acc_txt, e.create_by, to_char(e.create_tm, 'mm-dd-yyyy'), 'Homo sapiens' -- Exposure taxon always 9606 from edit.EXP_EVENT etn INNER JOIN edit.EXP_MARKER_TYPE emt ON etn.exp_marker_type_id = emt.id INNER JOIN edit.OBJECT_TYPE o ON emt.object_type_id = o.id LEFT OUTER JOIN pub2.TERM t ON etn.exp_marker_acc_txt = t.acc_txt AND o.id = t.object_type_id INNER JOIN edit.EXPOSURE e ON e.exp_event_id = etn.id WHERE (upper(etn.exp_marker_term_nm) <> upper(t.nm) OR t.nm is null) and etn.exp_marker_acc_txt is not null AND exp_marker_acc_txt <> '' order by term_nm, term_acc_txt;
Date: 2026-01-09 08:32:58 Duration: 12s160ms Database: ctdprd51 User: editeu Bind query: yes
20 7s206ms 7s303ms 7s242ms 5 36s212ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jan 09 06 1 7s206ms 7s206ms 10 1 7s228ms 7s228ms 14 1 7s241ms 7s241ms 18 2 14s535ms 7s267ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:00:29 Duration: 7s303ms
-
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 14:00:29 Duration: 7s241ms
-
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-09 18:10:29 Duration: 7s231ms
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
-
Events
Log levels
Key values
- 8,959 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 3 ERROR entries
- 0 WARNING entries
- 0 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 3 Max number of times the same event was reported
- 3 Total events found
Rank Times reported Error 1 3 ERROR: duplicate key value violates unique constraint "..."
Times Reported Most Frequent Error / Event #1
Day Hour Count Jan 09 06 3 - ERROR: duplicate key value violates unique constraint "ixn_actor_pk"
Detail: Key (ixn_id, position_seq)=(9308204, 2) already exists.
Context: SQL statement "INSERT INTO edit.ixn_actor (ixn_id ,position_seq ,object_type_id ,acc_txt ,acc_db_id ,object_nm ,actor_form_type_id ,qual_actor_form_type_id ,seq_acc_txt ,create_by ,mod_by ,create_tm ,mod_tm ) VALUES (p_ixn_id ,p_position_seq ,p_object_type_id ,p_acc_txt ,p_acc_db_id ,p_object_nm ,p_actor_form_type_id ,p_qual_actor_form_type_id ,p_seq_acc_txt ,p_create_by ,p_mod_by ,p_create_tm ,p_mod_tm )" PL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 9 at SQL statement
Statement: select * from edit.ins_ixn_actor($1, $2, $3, $4, $5, $6, $7, $8, $9, $10, $11, $12, $13) as resultDate: 2026-01-09 06:06:58 Database: ctdprd51 Application: User: editeu Remote: