pgBadger-
Global information
- Generated on Sun May 3 04:15:03 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260502
- Parsed 15,832 log entries in 2s
- Log start from 2026-05-02 00:00:01 to 2026-05-02 23:59:38
-
Overview
Global Stats
- 62 Number of unique normalized queries
- 64 Number of queries
- 1h46m28s Total query duration
- 2026-05-02 00:09:18 First query
- 2026-05-02 19:47:10 Last query
- 1 queries/s at 2026-05-02 18:14:04 Query peak
- 1h46m28s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 1h46m28s Execute total duration
- 0 Number of events
- 0 Number of unique normalized events
- 0 Max number of times the same event was reported
- 0 Number of cancellation
- 7 Total number of automatic vacuums
- 17 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 1,925 Total number of sessions
- 57 sessions at 2026-05-02 00:00:59 Session peak
- 40d1h7m Total duration of sessions
- 29m57s Average duration of sessions
- 0 Average queries per session
- 3s318ms Average queries duration per session
- 29m54s Average idle time per session
- 1,925 Total number of connections
- 9 connections/s at 2026-05-02 05:40:09 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-02 18:14:04 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-02 05:43:43 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-02 18:14:04 Date
Queries duration
Key values
- 1h46m28s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 02 00 2 0ms 9m16s 4m41s 0ms 0ms 9m23s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 1 0ms 5s521ms 5s521ms 0ms 0ms 5s521ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s666ms 5s655ms 0ms 5s644ms 5s666ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 3 0ms 20s813ms 16s421ms 0ms 20s84ms 20s813ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 1 0ms 6s477ms 6s477ms 0ms 0ms 6s477ms 13 1 0ms 27s593ms 27s593ms 0ms 0ms 27s593ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 31 0ms 26m51s 1m32s 1m19s 2m12s 26m51s 19 23 0ms 27m6s 2m3s 1m41s 7m12s 27m52s 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 02 00 1 0 9m16s 0ms 0ms 9m16s 01 0 0 0ms 0ms 0ms 0ms 02 1 0 5s521ms 0ms 0ms 5s521ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s655ms 0ms 0ms 5s666ms 06 0 0 0ms 0ms 0ms 0ms 07 3 0 16s421ms 0ms 0ms 20s813ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 1 0 6s477ms 0ms 0ms 6s477ms 13 1 0 27s593ms 0ms 0ms 27s593ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 31 1m32s 54s720ms 1m19s 26m51s 19 0 23 2m3s 1m3s 1m41s 27m52s 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 02 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare May 02 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 1 1.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 0 0.00 0.00% 07 0 3 3.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 1 1.00 0.00% 13 0 1 1.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second May 02 00 81 0.02/s 01 77 0.02/s 02 80 0.02/s 03 79 0.02/s 04 79 0.02/s 05 95 0.03/s 06 79 0.02/s 07 83 0.02/s 08 84 0.02/s 09 85 0.02/s 10 78 0.02/s 11 76 0.02/s 12 81 0.02/s 13 103 0.03/s 14 80 0.02/s 15 77 0.02/s 16 79 0.02/s 17 78 0.02/s 18 82 0.02/s 19 76 0.02/s 20 74 0.02/s 21 70 0.02/s 22 71 0.02/s 23 78 0.02/s Day Hour Count Average Duration Average idle time May 02 00 81 29m37s 29m30s 01 77 31m14s 31m14s 02 80 30m55s 30m55s 03 79 31m12s 31m12s 04 79 30m44s 30m44s 05 95 25m20s 25m20s 06 79 30m7s 30m7s 07 83 29m53s 29m52s 08 84 28m20s 28m20s 09 85 29m36s 29m36s 10 78 29m54s 29m54s 11 76 30m32s 30m32s 12 81 29m46s 29m46s 13 103 23m56s 23m56s 14 80 30m43s 30m43s 15 77 31m3s 31m3s 16 79 31m3s 31m3s 17 78 30m45s 30m45s 18 81 29m54s 29m19s 19 77 31m56s 31m19s 20 74 31m25s 31m25s 21 70 31m20s 31m20s 22 71 31m19s 31m19s 23 78 31m39s 31m39s -
Connections
Established Connections
Key values
- 9 connections Connection Peak
- 2026-05-02 05:40:09 Date
Connections per database
Key values
- ctdprd51 Main Database
- 1,925 connections Total
Connections per user
Key values
- pubeu Main User
- 1,925 connections Total
-
Sessions
Simultaneous sessions
Key values
- 57 sessions Session Peak
- 2026-05-02 00:00:59 Date
Histogram of session times
Key values
- 1,825 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 1,925 sessions Total
Sessions per user
Key values
- pubeu Main User
- 1,925 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 1,925 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 69,435 buffers Checkpoint Peak
- 2026-05-02 19:47:28 Date
- 1620.000 seconds Highest write time
- 0.002 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-05-02 00:20:55 Date
Checkpoints distance
Key values
- 995.99 Mo Distance Peak
- 2026-05-02 23:17:29 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time May 02 00 327 32.95s 0.003s 32.961s 01 76 7.763s 0.002s 7.771s 02 140 14.2s 0.002s 14.211s 03 82 8.393s 0.002s 8.403s 04 61 6.288s 0.002s 6.298s 05 6,098 610.605s 0.002s 610.668s 06 62 6.366s 0.002s 6.375s 07 122 12.372s 0.002s 12.382s 08 207 20.909s 0.002s 20.917s 09 107 10.878s 0.002s 10.886s 10 105 10.612s 0.001s 10.616s 11 6,191 620.116s 0.003s 620.181s 12 551 55.336s 0.002s 55.353s 13 61 6.273s 0.002s 6.283s 14 30 3.206s 0.002s 3.215s 15 22 2.376s 0.002s 2.384s 16 10 1.076s 0.001s 1.081s 17 14 1.476s 0.001s 1.481s 18 6 0.777s 0.001s 0.801s 19 69,435 1,619.306s 0.001s 1,619.378s 20 13,749 1,376.986s 0.003s 1,377.047s 21 92 9.369s 0.002s 9.379s 22 22 2.284s 0.001s 2.289s 23 51,183 1,628.688s 0.004s 1,628.834s Day Hour Added Removed Recycled Synced files Longest sync Average sync May 02 00 0 0 0 64 0.001s 0.002s 01 0 0 0 20 0.001s 0.002s 02 0 0 0 23 0.001s 0.002s 03 0 0 0 25 0.001s 0.002s 04 0 0 0 21 0.001s 0.002s 05 0 4 0 47 0.001s 0.002s 06 0 0 0 24 0.001s 0.002s 07 0 0 0 19 0.001s 0.002s 08 0 0 0 41 0.001s 0.002s 09 0 0 0 25 0.001s 0.002s 10 0 0 0 19 0.001s 0.001s 11 0 2 0 57 0.001s 0.003s 12 0 1 0 43 0.001s 0.002s 13 0 0 0 19 0.001s 0.002s 14 0 0 0 18 0.001s 0.002s 15 0 0 0 15 0.001s 0.002s 16 0 0 0 7 0.001s 0.001s 17 0 0 0 8 0.001s 0.001s 18 0 0 0 7 0.001s 0.001s 19 0 8 0 21 0.001s 0.001s 20 0 1 0 46 0.001s 0.003s 21 0 0 0 25 0.001s 0.002s 22 0 0 0 11 0.001s 0.001s 23 0 31 0 51 0.001s 0.003s Day Hour Count Avg time (sec) May 02 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate May 02 00 1,062.50 kB 71,084.50 kB 01 143.50 kB 57,595.00 kB 02 171.00 kB 46,683.00 kB 03 160.00 kB 37,844.50 kB 04 47.50 kB 30,674.00 kB 05 28,610.00 kB 53,813.50 kB 06 61.50 kB 43,625.00 kB 07 54.00 kB 35,346.50 kB 08 521.50 kB 28,729.50 kB 09 162.00 kB 23,293.50 kB 10 449.00 kB 19,917.00 kB 11 14,089.67 kB 37,973.00 kB 12 1,944.00 kB 29,490.00 kB 13 70.50 kB 23,900.50 kB 14 59.50 kB 19,370.50 kB 15 46.00 kB 15,700.50 kB 16 24.00 kB 13,391.00 kB 17 41.00 kB 12,056.00 kB 18 8.00 kB 10,851.00 kB 19 2,783.00 kB 10,044.00 kB 20 46,932.00 kB 127,076.67 kB 21 221.50 kB 97,453.50 kB 22 97.00 kB 83,122.00 kB 23 170,041.33 kB 460,661.33 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size May 02 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 1.68 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-05-02 22:47:22 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 1.68 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-05-02 22:47:22 Date
Analyzes per table
Key values
- pubc.log_query (11) Main table analyzed (database ctdprd51)
- 17 analyzes Total
Vacuums per table
Key values
- pub2.term_set_enrichment (3) Main table vacuumed on database ctdprd51
- 7 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pub2.term_set_enrichment 3 0 2,022 0 349 0 0 665 6 74,920 ctdprd51.pub2.term_set_enrichment_agent 2 0 66,096 0 8,823 0 0 27,827 3 1,666,828 ctdprd51.pg_toast.pg_toast_2619 1 1 3,600 0 2,547 0 9,860 3,889 1,096 567,130 ctdprd51.pubc.log_query 1 1 227 0 41 0 0 66 31 219,022 Total 7 2 71,945 2,071 11,760 0 9,860 32,447 1,136 2,527,900 Tuples removed per table
Key values
- pg_toast.pg_toast_2619 (4275) Main table with removed tuples on database ctdprd51
- 4280 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_toast.pg_toast_2619 1 1 4,275 22,106 0 0 12,592 ctdprd51.pubc.log_query 1 1 5 781 0 0 27 ctdprd51.pub2.term_set_enrichment 3 0 0 159,163 0 0 2,631 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 6,873,016 0 0 78,104 Total 7 2 4,280 7,055,066 0 0 93,354 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs May 02 00 0 0 01 0 1 02 0 1 03 0 1 04 0 1 05 2 4 06 0 0 07 0 1 08 0 0 09 1 0 10 0 2 11 0 0 12 0 1 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 2 2 20 0 0 21 0 1 22 2 2 23 0 0 - 1.68 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 9 Total read queries
- 54 Total write queries
Queries by database
Key values
- unknown Main database
- 54 Requests
- 1h35m12s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 85 Requests
User Request type Count Duration editeu Total 4 6m27s select 4 6m27s postgres Total 9 9m3s copy to 9 9m3s pubc Total 2 9m27s select 2 9m27s pubeu Total 12 2m5s select 12 2m5s qaeu Total 3 20s289ms select 3 20s289ms unknown Total 85 1h41m34s copy to 81 1h40m58s others 1 6s971ms select 3 28s822ms Duration by user
Key values
- 1h41m34s (unknown) Main time consuming user
User Request type Count Duration editeu Total 4 6m27s select 4 6m27s postgres Total 9 9m3s copy to 9 9m3s pubc Total 2 9m27s select 2 9m27s pubeu Total 12 2m5s select 12 2m5s qaeu Total 3 20s289ms select 3 20s289ms unknown Total 85 1h41m34s copy to 81 1h40m58s others 1 6s971ms select 3 28s822ms Queries by host
Key values
- unknown Main host
- 115 Requests
- 2h8m57s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 62 Requests
- 1h36m52s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-05-02 00:49:05 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 46 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 27m6s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-05-02 19:31:02 ]
2 26m51s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-05-02 18:44:30 ]
3 9m16s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-05-02 00:09:18 - Database: ctdprd51 - User: pubc - Application: psql ]
4 6m58s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-05-02 18:57:02 ]
5 6m52s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-05-02 19:43:33 ]
6 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-02 19:46:30 ]
7 1m42s COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-05-02 18:48:04 ]
8 1m41s COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-05-02 19:34:39 ]
9 1m19s COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-05-02 19:01:33 ]
10 1m12s COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-05-02 18:15:17 ]
11 1m4s COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-05-02 19:02:39 ]
12 1m4s COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-05-02 18:16:22 ]
13 59s505ms COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-05-02 18:58:30 ]
14 55s8ms COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-05-02 19:00:05 ]
15 54s720ms COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-05-02 18:13:55 ]
16 50s404ms COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-05-02 19:36:02 ]
17 47s416ms COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-05-02 18:49:25 ]
18 46s188ms COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-05-02 19:31:53 ]
19 45s151ms COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;[ Date: 2026-05-02 18:12:17 ]
20 43s520ms COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-05-02 18:45:19 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 27m6s 1 27m6s 27m6s 27m6s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 02 19 1 27m6s 27m6s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 19:31:02 Duration: 27m6s
2 26m51s 1 26m51s 26m51s 26m51s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 02 18 1 26m51s 26m51s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 18:44:30 Duration: 26m51s
3 9m16s 1 9m16s 9m16s 9m16s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 02 00 1 9m16s 9m16s [ User: pubc - Total duration: 9m16s - Times executed: 1 ]
[ Application: psql - Total duration: 9m16s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-05-02 00:09:18 Duration: 9m16s Database: ctdprd51 User: pubc Application: psql
4 6m58s 1 6m58s 6m58s 6m58s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 02 18 1 6m58s 6m58s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 18:57:02 Duration: 6m58s
5 6m52s 1 6m52s 6m52s 6m52s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 02 19 1 6m52s 6m52s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 19:43:33 Duration: 6m52s
6 1m51s 1 1m51s 1m51s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 02 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-02 19:46:30 Duration: 1m51s
7 1m42s 1 1m42s 1m42s 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 02 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-05-02 18:48:04 Duration: 1m42s
8 1m41s 1 1m41s 1m41s 1m41s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 02 19 1 1m41s 1m41s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-05-02 19:34:39 Duration: 1m41s
9 1m19s 1 1m19s 1m19s 1m19s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 02 19 1 1m19s 1m19s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-05-02 19:01:33 Duration: 1m19s
10 1m12s 1 1m12s 1m12s 1m12s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 02 18 1 1m12s 1m12s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-05-02 18:15:17 Duration: 1m12s
11 1m4s 1 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 02 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-05-02 19:02:39 Duration: 1m4s
12 1m4s 1 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 02 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-05-02 18:16:22 Duration: 1m4s
13 59s505ms 1 59s505ms 59s505ms 59s505ms copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 02 18 1 59s505ms 59s505ms -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 18:58:30 Duration: 59s505ms
14 55s8ms 1 55s8ms 55s8ms 55s8ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 02 19 1 55s8ms 55s8ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 19:00:05 Duration: 55s8ms
15 54s720ms 1 54s720ms 54s720ms 54s720ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 02 18 1 54s720ms 54s720ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 18:13:55 Duration: 54s720ms
16 50s404ms 1 50s404ms 50s404ms 50s404ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 02 19 1 50s404ms 50s404ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-05-02 19:36:02 Duration: 50s404ms
17 47s416ms 1 47s416ms 47s416ms 47s416ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 02 18 1 47s416ms 47s416ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-05-02 18:49:25 Duration: 47s416ms
18 46s188ms 1 46s188ms 46s188ms 46s188ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 02 19 1 46s188ms 46s188ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-05-02 19:31:53 Duration: 46s188ms
19 45s151ms 1 45s151ms 45s151ms 45s151ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 02 18 1 45s151ms 45s151ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-05-02 18:12:17 Duration: 45s151ms
20 43s520ms 1 43s520ms 43s520ms 43s520ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 02 18 1 43s520ms 43s520ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-05-02 18:45:19 Duration: 43s520ms
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 2 40s898ms 20s84ms 20s813ms 20s449ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 02 07 2 40s898ms 20s449ms [ User: pubeu - Total duration: 40s898ms - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-02 07:48:44 Duration: 20s813ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-02 07:46:32 Duration: 20s84ms Database: ctdprd51 User: pubeu Bind query: yes
2 2 11s310ms 5s644ms 5s666ms 5s655ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 02 05 2 11s310ms 5s655ms [ User: pubeu - Total duration: 5s666ms - Times executed: 1 ]
[ User: qaeu - Total duration: 5s644ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-02 05:48:44 Duration: 5s666ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-02 05:43:43 Duration: 5s644ms Database: ctdprd51 User: qaeu Bind query: yes
3 1 27m6s 27m6s 27m6s 27m6s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 02 19 1 27m6s 27m6s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 19:31:02 Duration: 27m6s
4 1 26m51s 26m51s 26m51s 26m51s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 02 18 1 26m51s 26m51s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 18:44:30 Duration: 26m51s
5 1 9m16s 9m16s 9m16s 9m16s select maint_query_logs_archive ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 02 00 1 9m16s 9m16s [ User: pubc - Total duration: 9m16s - Times executed: 1 ]
[ Application: psql - Total duration: 9m16s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-05-02 00:09:18 Duration: 9m16s Database: ctdprd51 User: pubc Application: psql
6 1 6m58s 6m58s 6m58s 6m58s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 02 18 1 6m58s 6m58s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 18:57:02 Duration: 6m58s
7 1 6m52s 6m52s 6m52s 6m52s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 02 19 1 6m52s 6m52s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 19:43:33 Duration: 6m52s
8 1 1m51s 1m51s 1m51s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 02 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-02 19:46:30 Duration: 1m51s
9 1 1m42s 1m42s 1m42s 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 02 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-05-02 18:48:04 Duration: 1m42s
10 1 1m41s 1m41s 1m41s 1m41s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 02 19 1 1m41s 1m41s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-05-02 19:34:39 Duration: 1m41s
11 1 1m19s 1m19s 1m19s 1m19s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 02 19 1 1m19s 1m19s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-05-02 19:01:33 Duration: 1m19s
12 1 1m12s 1m12s 1m12s 1m12s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 02 18 1 1m12s 1m12s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-05-02 18:15:17 Duration: 1m12s
13 1 1m4s 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 02 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-05-02 19:02:39 Duration: 1m4s
14 1 1m4s 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 02 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-05-02 18:16:22 Duration: 1m4s
15 1 59s505ms 59s505ms 59s505ms 59s505ms copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 02 18 1 59s505ms 59s505ms -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 18:58:30 Duration: 59s505ms
16 1 55s8ms 55s8ms 55s8ms 55s8ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 02 19 1 55s8ms 55s8ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 19:00:05 Duration: 55s8ms
17 1 54s720ms 54s720ms 54s720ms 54s720ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 02 18 1 54s720ms 54s720ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 18:13:55 Duration: 54s720ms
18 1 50s404ms 50s404ms 50s404ms 50s404ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 02 19 1 50s404ms 50s404ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-05-02 19:36:02 Duration: 50s404ms
19 1 47s416ms 47s416ms 47s416ms 47s416ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 02 18 1 47s416ms 47s416ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-05-02 18:49:25 Duration: 47s416ms
20 1 46s188ms 46s188ms 46s188ms 46s188ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 02 19 1 46s188ms 46s188ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-05-02 19:31:53 Duration: 46s188ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 27m6s 27m6s 27m6s 1 27m6s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 02 19 1 27m6s 27m6s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 19:31:02 Duration: 27m6s
2 26m51s 26m51s 26m51s 1 26m51s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 02 18 1 26m51s 26m51s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 18:44:30 Duration: 26m51s
3 9m16s 9m16s 9m16s 1 9m16s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 02 00 1 9m16s 9m16s [ User: pubc - Total duration: 9m16s - Times executed: 1 ]
[ Application: psql - Total duration: 9m16s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-05-02 00:09:18 Duration: 9m16s Database: ctdprd51 User: pubc Application: psql
4 6m58s 6m58s 6m58s 1 6m58s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 02 18 1 6m58s 6m58s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 18:57:02 Duration: 6m58s
5 6m52s 6m52s 6m52s 1 6m52s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 02 19 1 6m52s 6m52s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 19:43:33 Duration: 6m52s
6 1m51s 1m51s 1m51s 1 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 02 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-02 19:46:30 Duration: 1m51s
7 1m42s 1m42s 1m42s 1 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 02 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-05-02 18:48:04 Duration: 1m42s
8 1m41s 1m41s 1m41s 1 1m41s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 02 19 1 1m41s 1m41s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-05-02 19:34:39 Duration: 1m41s
9 1m19s 1m19s 1m19s 1 1m19s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 02 19 1 1m19s 1m19s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-05-02 19:01:33 Duration: 1m19s
10 1m12s 1m12s 1m12s 1 1m12s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 02 18 1 1m12s 1m12s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-05-02 18:15:17 Duration: 1m12s
11 1m4s 1m4s 1m4s 1 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 02 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-05-02 19:02:39 Duration: 1m4s
12 1m4s 1m4s 1m4s 1 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 02 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-05-02 18:16:22 Duration: 1m4s
13 59s505ms 59s505ms 59s505ms 1 59s505ms copy pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 02 18 1 59s505ms 59s505ms -
COPY pub1.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-05-02 18:58:30 Duration: 59s505ms
14 55s8ms 55s8ms 55s8ms 1 55s8ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 02 19 1 55s8ms 55s8ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 19:00:05 Duration: 55s8ms
15 54s720ms 54s720ms 54s720ms 1 54s720ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 02 18 1 54s720ms 54s720ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-05-02 18:13:55 Duration: 54s720ms
16 50s404ms 50s404ms 50s404ms 1 50s404ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 02 19 1 50s404ms 50s404ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-05-02 19:36:02 Duration: 50s404ms
17 47s416ms 47s416ms 47s416ms 1 47s416ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 02 18 1 47s416ms 47s416ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-05-02 18:49:25 Duration: 47s416ms
18 46s188ms 46s188ms 46s188ms 1 46s188ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 02 19 1 46s188ms 46s188ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-05-02 19:31:53 Duration: 46s188ms
19 45s151ms 45s151ms 45s151ms 1 45s151ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 02 18 1 45s151ms 45s151ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-05-02 18:12:17 Duration: 45s151ms
20 43s520ms 43s520ms 43s520ms 1 43s520ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 02 18 1 43s520ms 43s520ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-05-02 18:45:19 Duration: 43s520ms
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
-
Events
Log levels
Key values
- 7,886 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 0 ERROR entries
- 0 WARNING entries
- 0 EVENTLOG entries
Events per 5 minutes
NO DATASET
Most Frequent Errors/Events
Key values
- 0 Max number of times the same event was reported
- 0 Total events found
Rank Times reported Error NO DATASET