pgBadger-
Global information
- Generated on Thu May 7 04:15:03 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260506
- Parsed 16,522 log entries in 2s
- Log start from 2026-05-06 00:00:01 to 2026-05-06 23:58:43
-
Overview
Global Stats
- 23 Number of unique normalized queries
- 71 Number of queries
- 35m7s Total query duration
- 2026-05-06 00:00:23 First query
- 2026-05-06 21:43:26 Last query
- 1 queries/s at 2026-05-06 06:07:32 Query peak
- 35m7s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 35m7s Execute total duration
- 13 Number of events
- 7 Number of unique normalized events
- 7 Max number of times the same event was reported
- 0 Number of cancellation
- 15 Total number of automatic vacuums
- 43 Total number of automatic analyzes
- 4 Number temporary file
- 2.01 MiB Max size of temporary file
- 1.23 MiB Average size of temporary file
- 1,982 Total number of sessions
- 60 sessions at 2026-05-06 01:24:28 Session peak
- 40d17h58m15s Total duration of sessions
- 29m36s Average duration of sessions
- 0 Average queries per session
- 1s63ms Average queries duration per session
- 29m35s Average idle time per session
- 1,984 Total number of connections
- 9 connections/s at 2026-05-06 05:45:09 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-06 06:07:32 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-06 15:04:33 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-05-06 06:07:32 Date
Queries duration
Key values
- 35m7s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 06 00 3 0ms 9m18s 3m10s 0ms 5s414ms 9m25s 01 1 0ms 6s965ms 6s965ms 0ms 0ms 6s965ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s589ms 5s573ms 0ms 0ms 5s589ms 06 9 0ms 1m51s 24s341ms 20s889ms 47s471ms 1m51s 07 5 0ms 9s269ms 8s392ms 5s67ms 9s184ms 18s529ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 4 0ms 6s228ms 6s210ms 0ms 6s199ms 6s228ms 10 9 0ms 1m51s 24s428ms 0ms 39s614ms 1m51s 11 1 0ms 6s192ms 6s192ms 0ms 0ms 6s192ms 12 14 0ms 1m9s 38s535ms 27s494ms 2m1s 2m30s 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 9 0ms 1m51s 24s415ms 20s832ms 47s341ms 1m51s 15 2 0ms 6s272ms 5s992ms 0ms 5s713ms 6s272ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 1m52s 24s464ms 20s868ms 47s449ms 1m52s 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 1 0ms 5s2ms 5s2ms 0ms 0ms 5s2ms 21 2 0ms 5s155ms 5s148ms 0ms 0ms 10s297ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 06 00 2 0 4m41s 0ms 0ms 9m18s 01 1 0 6s965ms 0ms 0ms 6s965ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s573ms 0ms 0ms 5s589ms 06 0 9 24s341ms 0ms 20s889ms 1m51s 07 5 0 8s392ms 0ms 5s67ms 18s529ms 08 0 0 0ms 0ms 0ms 0ms 09 4 0 6s210ms 0ms 0ms 6s228ms 10 0 9 24s428ms 0ms 0ms 1m51s 11 1 0 6s192ms 0ms 0ms 6s192ms 12 14 0 38s535ms 0ms 27s494ms 2m30s 13 0 0 0ms 0ms 0ms 0ms 14 0 9 24s415ms 0ms 20s832ms 1m51s 15 2 0 5s992ms 0ms 0ms 6s272ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 9 24s464ms 0ms 20s868ms 1m52s 19 0 0 0ms 0ms 0ms 0ms 20 1 0 5s2ms 0ms 0ms 5s2ms 21 2 0 5s148ms 0ms 0ms 10s297ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) May 06 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare May 06 00 0 1 1.00 0.00% 01 0 1 1.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 0 0.00 0.00% 07 0 5 5.00 0.00% 08 0 0 0.00 0.00% 09 0 4 4.00 0.00% 10 0 0 0.00 0.00% 11 0 1 1.00 0.00% 12 0 13 13.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 2 2.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 1 1.00 0.00% 21 0 2 2.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second May 06 00 79 0.02/s 01 100 0.03/s 02 107 0.03/s 03 75 0.02/s 04 72 0.02/s 05 95 0.03/s 06 75 0.02/s 07 74 0.02/s 08 77 0.02/s 09 80 0.02/s 10 80 0.02/s 11 74 0.02/s 12 111 0.03/s 13 81 0.02/s 14 83 0.02/s 15 79 0.02/s 16 79 0.02/s 17 79 0.02/s 18 81 0.02/s 19 81 0.02/s 20 77 0.02/s 21 80 0.02/s 22 85 0.02/s 23 80 0.02/s Day Hour Count Average Duration Average idle time May 06 00 79 30m39s 30m32s 01 100 24m46s 24m46s 02 107 22m37s 22m37s 03 75 32m18s 32m18s 04 72 33m8s 33m8s 05 95 26m35s 26m35s 06 75 29m54s 29m51s 07 74 31m5s 31m4s 08 77 31m14s 31m14s 09 80 30m29s 30m29s 10 77 31m10s 31m8s 11 73 31m40s 31m40s 12 108 22m22s 22m17s 13 85 35m5s 35m5s 14 85 31m17s 31m14s 15 80 32m43s 32m43s 16 79 30m12s 30m12s 17 79 31m25s 31m25s 18 81 30m12s 30m9s 19 79 30m53s 30m53s 20 77 30m51s 30m51s 21 80 27m28s 27m28s 22 85 29m2s 29m2s 23 80 30m30s 30m30s -
Connections
Established Connections
Key values
- 9 connections Connection Peak
- 2026-05-06 05:45:09 Date
Connections per database
Key values
- ctdprd51 Main Database
- 1,984 connections Total
Connections per user
Key values
- pubeu Main User
- 1,984 connections Total
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Sessions
Simultaneous sessions
Key values
- 60 sessions Session Peak
- 2026-05-06 01:24:28 Date
Histogram of session times
Key values
- 1,781 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 1,982 sessions Total
Sessions per user
Key values
- pubeu Main User
- 1,982 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 1,982 sessions Total
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Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 63,644 buffers Checkpoint Peak
- 2026-05-06 06:17:36 Date
- 1619.786 seconds Highest write time
- 0.002 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-05-06 01:20:38 Date
Checkpoints distance
Key values
- 885.01 Mo Distance Peak
- 2026-05-06 06:17:36 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time May 06 00 1,882 188.661s 0.003s 188.672s 01 16 1.689s 0.001s 1.693s 02 7,053 705.807s 0.004s 705.87s 03 335 33.441s 0.001s 33.449s 04 26,020 2,182.947s 0.003s 2,183.126s 05 35,690 1,637.798s 0.002s 1,637.808s 06 64,118 1,667.283s 0.003s 1,667.411s 07 280 28.228s 0.003s 28.237s 08 25,689 1,619.78s 0.001s 1,619.894s 09 10,363 1,037.698s 0.003s 1,037.71s 10 405 40.631s 0.002s 40.64s 11 150 15.193s 0.002s 15.202s 12 258 26.03s 0.002s 26.089s 13 57 5.884s 0.002s 5.893s 14 111 11.28s 0.002s 11.29s 15 235 23.73s 0.002s 23.738s 16 426 42.873s 0.002s 42.928s 17 115 11.608s 0.001s 11.613s 18 16 1.691s 0.001s 1.696s 19 0 0s 0s 0s 20 17 1.866s 0.002s 1.875s 21 55 5.693s 0.002s 5.702s 22 80 8.182s 0.002s 8.19s 23 72 7.279s 0.002s 7.287s Day Hour Added Removed Recycled Synced files Longest sync Average sync May 06 00 0 0 0 83 0.001s 0.002s 01 0 0 0 8 0.001s 0.001s 02 0 4 0 79 0.001s 0.003s 03 0 1 0 20 0.001s 0.001s 04 0 34 0 59 0.001s 0.002s 05 0 0 0 49 0.001s 0.002s 06 0 28 0 146 0.001s 0.003s 07 0 0 0 74 0.001s 0.002s 08 0 24 0 31 0.001s 0.001s 09 0 0 0 45 0.001s 0.003s 10 0 0 0 22 0.001s 0.002s 11 0 0 0 21 0.001s 0.002s 12 0 1 0 49 0.001s 0.002s 13 0 0 0 21 0.001s 0.002s 14 0 0 0 18 0.001s 0.002s 15 0 0 0 109 0.001s 0.002s 16 0 1 0 125 0.001s 0.002s 17 0 0 0 51 0.001s 0.001s 18 0 0 0 10 0.001s 0.001s 19 0 0 0 0 0s 0s 20 0 0 0 15 0.001s 0.002s 21 0 0 0 21 0.001s 0.002s 22 0 0 0 20 0.001s 0.002s 23 0 0 0 23 0.001s 0.002s Day Hour Count Avg time (sec) May 06 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate May 06 00 4,221.50 kB 17,344.00 kB 01 25.00 kB 14,795.00 kB 02 23,469.67 kB 54,613.00 kB 03 3,206.00 kB 44,943.00 kB 04 143,502.50 kB 143,502.50 kB 05 141,420.00 kB 267,074.50 kB 06 151,928.33 kB 409,446.33 kB 07 880.00 kB 314,179.00 kB 08 278,287.00 kB 295,727.00 kB 09 38,041.67 kB 250,700.00 kB 10 871.00 kB 192,372.50 kB 11 224.00 kB 155,891.00 kB 12 7,050.50 kB 126,984.50 kB 13 124.00 kB 103,509.50 kB 14 90.50 kB 83,861.50 kB 15 722.50 kB 68,024.50 kB 16 1,309.00 kB 55,315.50 kB 17 895.00 kB 47,333.00 kB 18 42.00 kB 42,604.00 kB 19 0.00 kB 0.00 kB 20 30.50 kB 36,430.50 kB 21 96.00 kB 29,523.50 kB 22 109.50 kB 23,935.00 kB 23 124.50 kB 19,409.50 kB -
Temporary Files
Size of temporary files
Key values
- 4.91 MiB Temp Files size Peak
- 2026-05-06 12:37:16 Date
Number of temporary files
Key values
- 4 per second Temp Files Peak
- 2026-05-06 12:37:16 Date
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size May 06 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 4 4.91 MiB 1.23 MiB 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Queries generating the most temporary files (N)
Rank Count Total size Min size Max size Avg size Query 1 4 4.91 MiB 768.00 KiB 2.01 MiB 1.23 MiB vacuum full analyze edit.reference_contact;-
VACUUM FULL ANALYZE edit.reference_contact;
Date: 2026-05-06 12:37:16 Duration: 0ms
Queries generating the largest temporary files
Rank Size Query 1 2.01 MiB VACUUM FULL ANALYZE edit.reference_contact;[ Date: 2026-05-06 12:37:16 ]
2 1.11 MiB VACUUM FULL ANALYZE edit.reference_contact;[ Date: 2026-05-06 12:37:16 ]
3 1.04 MiB VACUUM FULL ANALYZE edit.reference_contact;[ Date: 2026-05-06 12:37:16 ]
4 768.00 KiB VACUUM FULL ANALYZE edit.reference_contact;[ Date: 2026-05-06 12:37:16 ]
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Vacuums
Vacuums / Analyzes Distribution
Key values
- 5.68 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-05-06 05:41:30 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 5.68 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-05-06 05:41:30 Date
Analyzes per table
Key values
- pubc.log_query (38) Main table analyzed (database ctdprd51)
- 43 analyzes Total
Vacuums per table
Key values
- pubc.log_query (11) Main table vacuumed on database ctdprd51
- 15 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 11 5 6,142 0 551 0 14 1,251 115 904,825 ctdprd51.pub2.term_set_enrichment 2 0 3,471 0 1,468 0 0 1,631 3 116,543 ctdprd51.pub2.term_set_enrichment_agent 1 0 78,959 0 22,783 0 0 39,414 2 2,342,042 ctdprd51.pg_catalog.pg_statistic 1 1 741 0 188 0 118 507 163 692,243 Total 15 6 89,313 56 24,990 0 132 42,803 283 4,055,653 Tuples removed per table
Key values
- pg_catalog.pg_statistic (571) Main table with removed tuples on database ctdprd51
- 607 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_catalog.pg_statistic 1 1 571 3,435 0 0 410 ctdprd51.pubc.log_query 11 5 36 167,871 0 0 3,629 ctdprd51.pub2.term_set_enrichment_agent 1 0 0 18,277,557 0 0 207,701 ctdprd51.pub2.term_set_enrichment 2 0 0 483,140 0 0 8,009 Total 15 6 607 18,932,003 0 0 219,749 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs May 06 00 1 1 01 4 16 02 3 11 03 2 5 04 2 5 05 1 2 06 0 0 07 0 2 08 1 0 09 0 0 10 1 0 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 - 5.68 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 34 Total read queries
- 36 Total write queries
Queries by database
Key values
- ctdprd51 Main database
- 37 Requests
- 26m45s (ctdprd51)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 63 Requests
User Request type Count Duration edit Total 1 5s837ms select 1 5s837ms postgres Total 16 17m29s copy to 16 17m29s pubc Total 1 9m18s select 1 9m18s pubeu Total 44 17m26s select 44 17m26s qaeu Total 2 11s97ms select 2 11s97ms unknown Total 63 14m50s copy to 56 11m48s others 1 6s754ms select 6 2m55s Duration by user
Key values
- 17m29s (postgres) Main time consuming user
User Request type Count Duration edit Total 1 5s837ms select 1 5s837ms postgres Total 16 17m29s copy to 16 17m29s pubc Total 1 9m18s select 1 9m18s pubeu Total 44 17m26s select 44 17m26s qaeu Total 2 11s97ms select 2 11s97ms unknown Total 63 14m50s copy to 56 11m48s others 1 6s754ms select 6 2m55s Queries by host
Key values
- unknown Main host
- 127 Requests
- 59m21s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 61 Requests
- 16m58s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-05-06 00:22:28 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 38 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 9m18s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-05-06 00:09:20 - Database: ctdprd51 - User: pubc - Application: psql ]
2 1m52s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-06 18:06:54 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
3 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-06 10:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
4 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-06 14:06:54 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
5 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-06 06:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
6 1m9s SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;[ Date: 2026-05-06 12:23:32 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
7 1m9s SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;[ Date: 2026-05-06 12:23:24 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
8 1m9s SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;[ Date: 2026-05-06 12:24:36 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
9 1m8s SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;[ Date: 2026-05-06 12:25:17 - Bind query: yes ]
10 33s535ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;[ Date: 2026-05-06 12:29:52 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
11 31s337ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;[ Date: 2026-05-06 12:29:48 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
12 28s949ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;[ Date: 2026-05-06 12:29:36 - Bind query: yes ]
13 28s187ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;[ Date: 2026-05-06 12:25:46 - Bind query: yes ]
14 27s910ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;[ Date: 2026-05-06 12:29:22 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
15 27s778ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;[ Date: 2026-05-06 12:25:43 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
16 27s494ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;[ Date: 2026-05-06 12:26:03 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
17 26s6ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50 OFFSET 520550;[ Date: 2026-05-06 12:28:36 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
18 25s790ms SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;[ Date: 2026-05-06 12:25:44 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
19 24s194ms COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-06 18:07:18 ]
20 24s175ms COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-05-06 14:07:18 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 9m18s 1 9m18s 9m18s 9m18s select maint_query_logs_archive ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 06 00 1 9m18s 9m18s [ User: pubc - Total duration: 9m18s - Times executed: 1 ]
[ Application: psql - Total duration: 9m18s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-05-06 00:09:20 Duration: 9m18s Database: ctdprd51 User: pubc Application: psql
2 7m27s 4 1m51s 1m52s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 06 06 1 1m51s 1m51s 10 1 1m51s 1m51s 14 1 1m51s 1m51s 18 1 1m52s 1m52s [ User: postgres - Total duration: 7m27s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 7m27s - Times executed: 4 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 18:06:54 Duration: 1m52s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 14:06:54 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
3 4m36s 4 1m8s 1m9s 1m9s select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 06 12 4 4m36s 1m9s [ User: pubeu - Total duration: 3m28s - Times executed: 3 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:23:32 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:23:24 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:24:36 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
4 2m1s 4 27s910ms 33s535ms 30s433ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 06 12 4 2m1s 30s433ms [ User: pubeu - Total duration: 1m32s - Times executed: 3 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:52 Duration: 33s535ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:48 Duration: 31s337ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:36 Duration: 28s949ms Bind query: yes
5 1m49s 4 25s790ms 28s187ms 27s312ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 06 12 4 1m49s 27s312ms [ User: pubeu - Total duration: 1m21s - Times executed: 3 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:25:46 Duration: 28s187ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:25:43 Duration: 27s778ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:26:03 Duration: 27s494ms Database: ctdprd51 User: pubeu Bind query: yes
6 1m36s 4 23s889ms 24s194ms 24s83ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 06 06 1 23s889ms 23s889ms 10 1 24s72ms 24s72ms 14 1 24s175ms 24s175ms 18 1 24s194ms 24s194ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 18:07:18 Duration: 24s194ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 14:07:18 Duration: 24s175ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 10:07:18 Duration: 24s72ms
7 1m17s 4 19s333ms 19s378ms 19s365ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 06 06 1 19s376ms 19s376ms 10 1 19s378ms 19s378ms 14 1 19s333ms 19s333ms 18 1 19s375ms 19s375ms [ User: postgres - Total duration: 1m17s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 1m17s - Times executed: 4 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:21 Duration: 19s378ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:21 Duration: 19s376ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:21 Duration: 19s375ms Database: ctdprd51 User: postgres Application: pg_dump
8 1m2s 4 15s376ms 15s619ms 15s510ms copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 06 06 1 15s376ms 15s376ms 10 1 15s541ms 15s541ms 14 1 15s503ms 15s503ms 18 1 15s619ms 15s619ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 18:07:34 Duration: 15s619ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 10:07:33 Duration: 15s541ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 14:07:34 Duration: 15s503ms
9 58s514ms 4 14s580ms 14s683ms 14s628ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 06 06 1 14s683ms 14s683ms 10 1 14s613ms 14s613ms 14 1 14s580ms 14s580ms 18 1 14s637ms 14s637ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:52 Duration: 14s683ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:51 Duration: 14s637ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:52 Duration: 14s613ms
10 57s860ms 4 14s441ms 14s499ms 14s465ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 06 06 1 14s499ms 14s499ms 10 1 14s461ms 14s461ms 14 1 14s441ms 14s441ms 18 1 14s458ms 14s458ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:01:07 Duration: 14s499ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:01:07 Duration: 14s461ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:01:06 Duration: 14s458ms
11 37s306ms 6 6s189ms 6s272ms 6s217ms select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 06 09 4 24s841ms 6s210ms 11 1 6s192ms 6s192ms 15 1 6s272ms 6s272ms [ User: pubeu - Total duration: 31s82ms - Times executed: 5 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'CTD_CHEM_GENE_IXNS.TSV') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'CTD_CHEM_GENE_IXNS.TSV') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CTD_CHEM_GENE_IXNS.TSV')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'CTD_CHEM_GENE_IXNS.TSV')) ii GROUP BY ii.cd;
Date: 2026-05-06 15:58:22 Duration: 6s272ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '3_HYDROXYFLUORENE') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '3_HYDROXYFLUORENE') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '3_HYDROXYFLUORENE')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '3_HYDROXYFLUORENE')) ii GROUP BY ii.cd;
Date: 2026-05-06 09:11:25 Duration: 6s228ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '1_HYDROXYPYRENE') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '1_HYDROXYPYRENE') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '1_HYDROXYPYRENE')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '1_HYDROXYPYRENE')) ii GROUP BY ii.cd;
Date: 2026-05-06 09:15:30 Duration: 6s224ms Bind query: yes
12 29s393ms 4 7s333ms 7s361ms 7s348ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 06 06 1 7s333ms 7s333ms 10 1 7s344ms 7s344ms 14 1 7s361ms 7s361ms 18 1 7s355ms 7s355ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 14:00:31 Duration: 7s361ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:30 Duration: 7s355ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:31 Duration: 7s344ms
13 26s6ms 1 26s6ms 26s6ms 26s6ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ? offset ?;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 06 12 1 26s6ms 26s6ms [ User: pubeu - Total duration: 26s6ms - Times executed: 1 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50 OFFSET 520550;
Date: 2026-05-06 12:28:36 Duration: 26s6ms Database: ctdprd51 User: pubeu Bind query: yes
14 25s782ms 5 5s2ms 5s414ms 5s156ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 06 00 1 5s414ms 5s414ms 07 1 5s67ms 5s67ms 20 1 5s2ms 5s2ms 21 2 10s297ms 5s148ms [ User: pubeu - Total duration: 25s782ms - Times executed: 5 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1325820' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 00:00:23 Duration: 5s414ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1312260' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 21:43:24 Duration: 5s155ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1404461' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 21:43:26 Duration: 5s142ms Database: ctdprd51 User: pubeu Bind query: yes
15 25s623ms 4 6s390ms 6s431ms 6s405ms copy edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 06 06 1 6s390ms 6s390ms 10 1 6s431ms 6s431ms 14 1 6s391ms 6s391ms 18 1 6s410ms 6s410ms -
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:01:15 Duration: 6s431ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:01:14 Duration: 6s410ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 14:01:14 Duration: 6s391ms
16 24s303ms 4 6s66ms 6s80ms 6s75ms copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 06 06 1 6s78ms 6s78ms 10 1 6s78ms 6s78ms 14 1 6s66ms 6s66ms 18 1 6s80ms 6s80ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:37 Duration: 6s80ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:37 Duration: 6s78ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:37 Duration: 6s78ms
17 18s450ms 2 9s180ms 9s269ms 9s225ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 06 07 2 18s450ms 9s225ms [ User: pubeu - Total duration: 18s450ms - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-05-06 07:45:11 Duration: 9s269ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-05-06 07:43:58 Duration: 9s180ms Database: ctdprd51 User: pubeu Bind query: yes
18 18s444ms 2 9s184ms 9s260ms 9s222ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 06 07 2 18s444ms 9s222ms [ User: pubeu - Total duration: 9s260ms - Times executed: 1 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-06 07:45:28 Duration: 9s260ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-06 07:44:16 Duration: 9s184ms Bind query: yes
19 12s678ms 2 5s713ms 6s965ms 6s339ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 06 01 1 6s965ms 6s965ms 15 1 5s713ms 5s713ms [ User: pubeu - Total duration: 12s678ms - Times executed: 2 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1438748') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1438748') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-05-06 01:25:26 Duration: 6s965ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1365787') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1365787') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-05-06 15:04:33 Duration: 5s713ms Database: ctdprd51 User: pubeu Bind query: yes
20 11s147ms 2 5s558ms 5s589ms 5s573ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 06 05 2 11s147ms 5s573ms [ User: qaeu - Total duration: 5s589ms - Times executed: 1 ]
[ User: pubeu - Total duration: 5s558ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-06 05:43:40 Duration: 5s589ms Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-06 05:48:40 Duration: 5s558ms Database: ctdprd51 User: pubeu Bind query: yes
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 6 37s306ms 6s189ms 6s272ms 6s217ms select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 06 09 4 24s841ms 6s210ms 11 1 6s192ms 6s192ms 15 1 6s272ms 6s272ms [ User: pubeu - Total duration: 31s82ms - Times executed: 5 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'CTD_CHEM_GENE_IXNS.TSV') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'CTD_CHEM_GENE_IXNS.TSV') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CTD_CHEM_GENE_IXNS.TSV')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'CTD_CHEM_GENE_IXNS.TSV')) ii GROUP BY ii.cd;
Date: 2026-05-06 15:58:22 Duration: 6s272ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '3_HYDROXYFLUORENE') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '3_HYDROXYFLUORENE') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '3_HYDROXYFLUORENE')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '3_HYDROXYFLUORENE')) ii GROUP BY ii.cd;
Date: 2026-05-06 09:11:25 Duration: 6s228ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '1_HYDROXYPYRENE') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '1_HYDROXYPYRENE') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '1_HYDROXYPYRENE')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '1_HYDROXYPYRENE')) ii GROUP BY ii.cd;
Date: 2026-05-06 09:15:30 Duration: 6s224ms Bind query: yes
2 5 25s782ms 5s2ms 5s414ms 5s156ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 06 00 1 5s414ms 5s414ms 07 1 5s67ms 5s67ms 20 1 5s2ms 5s2ms 21 2 10s297ms 5s148ms [ User: pubeu - Total duration: 25s782ms - Times executed: 5 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1325820' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 00:00:23 Duration: 5s414ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1312260' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 21:43:24 Duration: 5s155ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1404461' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 21:43:26 Duration: 5s142ms Database: ctdprd51 User: pubeu Bind query: yes
3 4 7m27s 1m51s 1m52s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 06 06 1 1m51s 1m51s 10 1 1m51s 1m51s 14 1 1m51s 1m51s 18 1 1m52s 1m52s [ User: postgres - Total duration: 7m27s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 7m27s - Times executed: 4 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 18:06:54 Duration: 1m52s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 14:06:54 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
4 4 4m36s 1m8s 1m9s 1m9s select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 06 12 4 4m36s 1m9s [ User: pubeu - Total duration: 3m28s - Times executed: 3 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:23:32 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:23:24 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:24:36 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
5 4 2m1s 27s910ms 33s535ms 30s433ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 06 12 4 2m1s 30s433ms [ User: pubeu - Total duration: 1m32s - Times executed: 3 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:52 Duration: 33s535ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:48 Duration: 31s337ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:36 Duration: 28s949ms Bind query: yes
6 4 1m49s 25s790ms 28s187ms 27s312ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 06 12 4 1m49s 27s312ms [ User: pubeu - Total duration: 1m21s - Times executed: 3 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:25:46 Duration: 28s187ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:25:43 Duration: 27s778ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:26:03 Duration: 27s494ms Database: ctdprd51 User: pubeu Bind query: yes
7 4 1m36s 23s889ms 24s194ms 24s83ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 06 06 1 23s889ms 23s889ms 10 1 24s72ms 24s72ms 14 1 24s175ms 24s175ms 18 1 24s194ms 24s194ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 18:07:18 Duration: 24s194ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 14:07:18 Duration: 24s175ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 10:07:18 Duration: 24s72ms
8 4 1m17s 19s333ms 19s378ms 19s365ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 06 06 1 19s376ms 19s376ms 10 1 19s378ms 19s378ms 14 1 19s333ms 19s333ms 18 1 19s375ms 19s375ms [ User: postgres - Total duration: 1m17s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 1m17s - Times executed: 4 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:21 Duration: 19s378ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:21 Duration: 19s376ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:21 Duration: 19s375ms Database: ctdprd51 User: postgres Application: pg_dump
9 4 1m2s 15s376ms 15s619ms 15s510ms copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 06 06 1 15s376ms 15s376ms 10 1 15s541ms 15s541ms 14 1 15s503ms 15s503ms 18 1 15s619ms 15s619ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 18:07:34 Duration: 15s619ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 10:07:33 Duration: 15s541ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 14:07:34 Duration: 15s503ms
10 4 58s514ms 14s580ms 14s683ms 14s628ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 06 06 1 14s683ms 14s683ms 10 1 14s613ms 14s613ms 14 1 14s580ms 14s580ms 18 1 14s637ms 14s637ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:52 Duration: 14s683ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:51 Duration: 14s637ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:52 Duration: 14s613ms
11 4 57s860ms 14s441ms 14s499ms 14s465ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 06 06 1 14s499ms 14s499ms 10 1 14s461ms 14s461ms 14 1 14s441ms 14s441ms 18 1 14s458ms 14s458ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:01:07 Duration: 14s499ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:01:07 Duration: 14s461ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:01:06 Duration: 14s458ms
12 4 29s393ms 7s333ms 7s361ms 7s348ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 06 06 1 7s333ms 7s333ms 10 1 7s344ms 7s344ms 14 1 7s361ms 7s361ms 18 1 7s355ms 7s355ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 14:00:31 Duration: 7s361ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:30 Duration: 7s355ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:31 Duration: 7s344ms
13 4 25s623ms 6s390ms 6s431ms 6s405ms copy edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 06 06 1 6s390ms 6s390ms 10 1 6s431ms 6s431ms 14 1 6s391ms 6s391ms 18 1 6s410ms 6s410ms -
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:01:15 Duration: 6s431ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:01:14 Duration: 6s410ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 14:01:14 Duration: 6s391ms
14 4 24s303ms 6s66ms 6s80ms 6s75ms copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 06 06 1 6s78ms 6s78ms 10 1 6s78ms 6s78ms 14 1 6s66ms 6s66ms 18 1 6s80ms 6s80ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:37 Duration: 6s80ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:37 Duration: 6s78ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:37 Duration: 6s78ms
15 2 18s450ms 9s180ms 9s269ms 9s225ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 06 07 2 18s450ms 9s225ms [ User: pubeu - Total duration: 18s450ms - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-05-06 07:45:11 Duration: 9s269ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-05-06 07:43:58 Duration: 9s180ms Database: ctdprd51 User: pubeu Bind query: yes
16 2 18s444ms 9s184ms 9s260ms 9s222ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 06 07 2 18s444ms 9s222ms [ User: pubeu - Total duration: 9s260ms - Times executed: 1 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-06 07:45:28 Duration: 9s260ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-06 07:44:16 Duration: 9s184ms Bind query: yes
17 2 12s678ms 5s713ms 6s965ms 6s339ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 06 01 1 6s965ms 6s965ms 15 1 5s713ms 5s713ms [ User: pubeu - Total duration: 12s678ms - Times executed: 2 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1438748') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1438748') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-05-06 01:25:26 Duration: 6s965ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1365787') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1365787') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-05-06 15:04:33 Duration: 5s713ms Database: ctdprd51 User: pubeu Bind query: yes
18 2 11s147ms 5s558ms 5s589ms 5s573ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 06 05 2 11s147ms 5s573ms [ User: qaeu - Total duration: 5s589ms - Times executed: 1 ]
[ User: pubeu - Total duration: 5s558ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-06 05:43:40 Duration: 5s589ms Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-06 05:48:40 Duration: 5s558ms Database: ctdprd51 User: pubeu Bind query: yes
19 1 9m18s 9m18s 9m18s 9m18s select maint_query_logs_archive ();Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 06 00 1 9m18s 9m18s [ User: pubc - Total duration: 9m18s - Times executed: 1 ]
[ Application: psql - Total duration: 9m18s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-05-06 00:09:20 Duration: 9m18s Database: ctdprd51 User: pubc Application: psql
20 1 26s6ms 26s6ms 26s6ms 26s6ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ? offset ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 06 12 1 26s6ms 26s6ms [ User: pubeu - Total duration: 26s6ms - Times executed: 1 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50 OFFSET 520550;
Date: 2026-05-06 12:28:36 Duration: 26s6ms Database: ctdprd51 User: pubeu Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 9m18s 9m18s 9m18s 1 9m18s select maint_query_logs_archive ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration May 06 00 1 9m18s 9m18s [ User: pubc - Total duration: 9m18s - Times executed: 1 ]
[ Application: psql - Total duration: 9m18s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-05-06 00:09:20 Duration: 9m18s Database: ctdprd51 User: pubc Application: psql
2 1m51s 1m52s 1m51s 4 7m27s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration May 06 06 1 1m51s 1m51s 10 1 1m51s 1m51s 14 1 1m51s 1m51s 18 1 1m52s 1m52s [ User: postgres - Total duration: 7m27s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 7m27s - Times executed: 4 ]
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 18:06:54 Duration: 1m52s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
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COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 14:06:54 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
3 1m8s 1m9s 1m9s 4 4m36s select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ? or substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ? or upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration May 06 12 4 4m36s 1m9s [ User: pubeu - Total duration: 3m28s - Times executed: 3 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:23:32 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:23:24 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC & TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '>TR & A0A093GXM0 & A0A093GXM0_STRCA & XANTHINE & DEHYDROGENASE/OXIDASE & OS=STRUTHIO & CAMELUS & AUSTRALIS & OX=441894 & GN=N308_04629 & PE=3 & SV=1 & MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS & KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC &TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG & TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP & PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM & LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ & LRWFAGPQIRNVAALGGNI') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '>TR' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'A0A093GXM0_STRCA' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'XANTHINE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'DEHYDROGENASE/OXIDASE' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OS=STRUTHIO' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CAMELUS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'AUSTRALIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'OX=441894' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'GN=N308_04629' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PE=3' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'SV=1' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'LRWFAGPQIRNVAALGGNI')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '>TR' OR upper(l.acc_txt) LIKE 'A0A093GXM0' OR upper(l.acc_txt) LIKE 'A0A093GXM0_STRCA' OR upper(l.acc_txt) LIKE 'XANTHINE' OR upper(l.acc_txt) LIKE 'DEHYDROGENASE/OXIDASE' OR upper(l.acc_txt) LIKE 'OS=STRUTHIO' OR upper(l.acc_txt) LIKE 'CAMELUS' OR upper(l.acc_txt) LIKE 'AUSTRALIS' OR upper(l.acc_txt) LIKE 'OX=441894' OR upper(l.acc_txt) LIKE 'GN=N308_04629' OR upper(l.acc_txt) LIKE 'PE=3' OR upper(l.acc_txt) LIKE 'SV=1' OR upper(l.acc_txt) LIKE 'MAPERTGDELVFFVNGKKVVEKNADPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMIS' OR upper(l.acc_txt) LIKE 'KYNPFRKKILHYTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFC' OR upper(l.acc_txt) LIKE 'TPGIVMSMYTLLRNKPEPKMEEIEDAFQGNLCRCTGYRPILEGYRTFAKDWGCCGRVANG' OR upper(l.acc_txt) LIKE 'TGCCRSEEENSMTGGCCEGKANGPGCCMNEKEDNVTMMSSSLFNPSEFQPLDPTQEPIFP' OR upper(l.acc_txt) LIKE 'PELMTQSNKQQKQLCFKGERVMWIQPTTLKELVALKSQYPSAKLVVGNTEVGIEMRLKNM' OR upper(l.acc_txt) LIKE 'LYPVIIAPAWISEMNAVQHTETGVNFGAACTLSSIEEVLRKAVAELPPYKTEVFQAVLEQ' OR upper(l.acc_txt) LIKE 'LRWFAGPQIRNVAALGGNI')) ii GROUP BY ii.cd;
Date: 2026-05-06 12:24:36 Duration: 1m9s Database: ctdprd51 User: pubeu Bind query: yes
4 27s910ms 33s535ms 30s433ms 4 2m1s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration May 06 12 4 2m1s 30s433ms [ User: pubeu - Total duration: 1m32s - Times executed: 3 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:52 Duration: 33s535ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:48 Duration: 31s337ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-05-06 12:29:36 Duration: 28s949ms Bind query: yes
5 25s790ms 28s187ms 27s312ms 4 1m49s select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration May 06 12 4 1m49s 27s312ms [ User: pubeu - Total duration: 1m21s - Times executed: 3 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:25:46 Duration: 28s187ms Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:25:43 Duration: 27s778ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-05-06 12:26:03 Duration: 27s494ms Database: ctdprd51 User: pubeu Bind query: yes
6 26s6ms 26s6ms 26s6ms 1 26s6ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ? offset ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration May 06 12 1 26s6ms 26s6ms [ User: pubeu - Total duration: 26s6ms - Times executed: 1 ]
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SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1259602') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50 OFFSET 520550;
Date: 2026-05-06 12:28:36 Duration: 26s6ms Database: ctdprd51 User: pubeu Bind query: yes
7 23s889ms 24s194ms 24s83ms 4 1m36s copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration May 06 06 1 23s889ms 23s889ms 10 1 24s72ms 24s72ms 14 1 24s175ms 24s175ms 18 1 24s194ms 24s194ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 18:07:18 Duration: 24s194ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 14:07:18 Duration: 24s175ms
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COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-05-06 10:07:18 Duration: 24s72ms
8 19s333ms 19s378ms 19s365ms 4 1m17s copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration May 06 06 1 19s376ms 19s376ms 10 1 19s378ms 19s378ms 14 1 19s333ms 19s333ms 18 1 19s375ms 19s375ms [ User: postgres - Total duration: 1m17s - Times executed: 4 ]
[ Application: pg_dump - Total duration: 1m17s - Times executed: 4 ]
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:21 Duration: 19s378ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:21 Duration: 19s376ms Database: ctdprd51 User: postgres Application: pg_dump
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COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:21 Duration: 19s375ms Database: ctdprd51 User: postgres Application: pg_dump
9 15s376ms 15s619ms 15s510ms 4 1m2s copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration May 06 06 1 15s376ms 15s376ms 10 1 15s541ms 15s541ms 14 1 15s503ms 15s503ms 18 1 15s619ms 15s619ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 18:07:34 Duration: 15s619ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 10:07:33 Duration: 15s541ms
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COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-05-06 14:07:34 Duration: 15s503ms
10 14s580ms 14s683ms 14s628ms 4 58s514ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration May 06 06 1 14s683ms 14s683ms 10 1 14s613ms 14s613ms 14 1 14s580ms 14s580ms 18 1 14s637ms 14s637ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:52 Duration: 14s683ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:51 Duration: 14s637ms
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COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:52 Duration: 14s613ms
11 14s441ms 14s499ms 14s465ms 4 57s860ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration May 06 06 1 14s499ms 14s499ms 10 1 14s461ms 14s461ms 14 1 14s441ms 14s441ms 18 1 14s458ms 14s458ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:01:07 Duration: 14s499ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:01:07 Duration: 14s461ms
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COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:01:06 Duration: 14s458ms
12 9s180ms 9s269ms 9s225ms 2 18s450ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration May 06 07 2 18s450ms 9s225ms [ User: pubeu - Total duration: 18s450ms - Times executed: 2 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-05-06 07:45:11 Duration: 9s269ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-05-06 07:43:58 Duration: 9s180ms Database: ctdprd51 User: pubeu Bind query: yes
13 9s184ms 9s260ms 9s222ms 2 18s444ms select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct r.acc_txt, ?)) as references, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id inner join reference r on gcr.reference_id = r.id left outer join term taxonterm on gcr.taxon_id = taxonterm.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) and exists ( select ? from gene_chem_reference_axn gcra where gcr.id = gcra.gene_chem_reference_id and gcra.action_type_nm in ( select ac.nm from action_type ap, action_type ac where ac.subset_left_no between ap.subset_left_no and ap.subset_right_no and (ap.nm = ?))) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration May 06 07 2 18s444ms 9s222ms [ User: pubeu - Total duration: 9s260ms - Times executed: 1 ]
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-06 07:45:28 Duration: 9s260ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id INNER JOIN reference r on gcr.reference_id = r.id LEFT OUTER JOIN term taxonTerm on gcr.taxon_id = taxonTerm.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'mRNA'))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'BISPHENOL A' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) AND exists ( SELECT 1 FROM gene_chem_reference_axn gcra WHERE gcr.id = gcra.gene_chem_reference_id AND gcra.action_type_nm IN ( SELECT ac.nm FROM action_type ap, action_type ac WHERE ac.subset_left_no BETWEEN ap.subset_left_no AND ap.subset_right_no AND (ap.nm = 'expression'))) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt;
Date: 2026-05-06 07:44:16 Duration: 9s184ms Bind query: yes
14 7s333ms 7s361ms 7s348ms 4 29s393ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration May 06 06 1 7s333ms 7s333ms 10 1 7s344ms 7s344ms 14 1 7s361ms 7s361ms 18 1 7s355ms 7s355ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 14:00:31 Duration: 7s361ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:30 Duration: 7s355ms
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COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:31 Duration: 7s344ms
15 6s390ms 6s431ms 6s405ms 4 25s623ms copy edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration May 06 06 1 6s390ms 6s390ms 10 1 6s431ms 6s431ms 14 1 6s391ms 6s391ms 18 1 6s410ms 6s410ms -
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:01:15 Duration: 6s431ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:01:14 Duration: 6s410ms
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COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 14:01:14 Duration: 6s391ms
16 5s713ms 6s965ms 6s339ms 2 12s678ms select coalesce(st.alt_nm, t.nm) slimtermnm, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.curated_reference_qty > ?) curatedcount, ( select count(*) from slim_term_mapping stm inner join chem_disease cd on cd.disease_id = stm.mapped_term_id where cd.chem_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) and stm.slim_term_id = st.slim_term_id and cd.indirect_gene_qty > ?) inferredcount from slim_term st inner join term t on st.slim_term_id = t.id where st.slim_id = ? order by ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration May 06 01 1 6s965ms 6s965ms 15 1 5s713ms 5s713ms [ User: pubeu - Total duration: 12s678ms - Times executed: 2 ]
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1438748') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1438748') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-05-06 01:25:26 Duration: 6s965ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemDiseasesBySlimDAO */ COALESCE(st.alt_nm, t.nm) slimTermNm, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1365787') AND stm.slim_term_id = st.slim_term_id AND cd.curated_reference_qty > 0) curatedCount, ( SELECT COUNT(*) FROM slim_term_mapping stm INNER JOIN chem_disease cd ON cd.disease_id = stm.mapped_term_id WHERE cd.chem_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '1365787') AND stm.slim_term_id = st.slim_term_id AND cd.indirect_gene_qty > 0) inferredCount FROM slim_term st INNER JOIN term t ON st.slim_term_id = t.id WHERE st.slim_id = 1 ORDER BY 1;
Date: 2026-05-06 15:04:33 Duration: 5s713ms Database: ctdprd51 User: pubeu Bind query: yes
17 6s189ms 6s272ms 6s217ms 6 37s306ms select ii.cd, count(ii.id) cnt from ( select ot.cd, tl.term_id id from object_type ot inner join term_label tl on ot.id = tl.object_type_id where tl.nm_fts @@ to_tsquery(?, ?) union select ?, r.id from reference r where r.title_abstract_fts @@ to_tsquery(?, ?) or r.id in ( select rpr.reference_id from reference_party_role rpr inner join reference_party rp on rpr.reference_party_id = rp.id where (substr(get_reference_party_nm_sort (rp.required_nm), ?, ?) like ?)) union select ot.cd, l.object_id from db_link l inner join object_type ot on l.object_type_id = ot.id where l.type_cd = ? and (upper(l.acc_txt) like ?)) ii group by ii.cd;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration May 06 09 4 24s841ms 6s210ms 11 1 6s192ms 6s192ms 15 1 6s272ms 6s272ms [ User: pubeu - Total duration: 31s82ms - Times executed: 5 ]
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', 'CTD_CHEM_GENE_IXNS.TSV') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', 'CTD_CHEM_GENE_IXNS.TSV') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE 'CTD_CHEM_GENE_IXNS.TSV')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE 'CTD_CHEM_GENE_IXNS.TSV')) ii GROUP BY ii.cd;
Date: 2026-05-06 15:58:22 Duration: 6s272ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '3_HYDROXYFLUORENE') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '3_HYDROXYFLUORENE') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '3_HYDROXYFLUORENE')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '3_HYDROXYFLUORENE')) ii GROUP BY ii.cd;
Date: 2026-05-06 09:11:25 Duration: 6s228ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BasicCountsDAO gen */ ii.cd, COUNT(ii.id) cnt FROM ( SELECT ot.cd, tl.term_id id FROM object_type ot INNER JOIN term_label tl ON ot.id = tl.object_type_id WHERE tl.nm_fts @@ to_tsquery('common.english_nostops', '1_HYDROXYPYRENE') UNION SELECT 'reference', r.id FROM reference r WHERE r.title_abstract_fts @@ to_tsquery('pg_catalog.english', '1_HYDROXYPYRENE') OR r.id IN ( SELECT rpr.reference_id FROM reference_party_role rpr INNER JOIN reference_party rp ON rpr.reference_party_id = rp.id WHERE (SUBSTR(get_reference_party_nm_sort (rp.required_nm), 1, 128) LIKE '1_HYDROXYPYRENE')) UNION SELECT ot.cd, l.object_id FROM db_link l INNER JOIN object_type ot on l.object_type_id = ot.id WHERE l.type_cd = 'A' AND (upper(l.acc_txt) LIKE '1_HYDROXYPYRENE')) ii GROUP BY ii.cd;
Date: 2026-05-06 09:15:30 Duration: 6s224ms Bind query: yes
18 6s66ms 6s80ms 6s75ms 4 24s303ms copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration May 06 06 1 6s78ms 6s78ms 10 1 6s78ms 6s78ms 14 1 6s66ms 6s66ms 18 1 6s80ms 6s80ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 18:00:37 Duration: 6s80ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 06:00:37 Duration: 6s78ms
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COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-05-06 10:00:37 Duration: 6s78ms
19 5s558ms 5s589ms 5s573ms 2 11s147ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration May 06 05 2 11s147ms 5s573ms [ User: qaeu - Total duration: 5s589ms - Times executed: 1 ]
[ User: pubeu - Total duration: 5s558ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-06 05:43:40 Duration: 5s589ms Database: ctdprd51 User: qaeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1339298)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-05-06 05:48:40 Duration: 5s558ms Database: ctdprd51 User: pubeu Bind query: yes
20 5s2ms 5s414ms 5s156ms 5 25s782ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration May 06 00 1 5s414ms 5s414ms 07 1 5s67ms 5s67ms 20 1 5s2ms 5s2ms 21 2 10s297ms 5s148ms [ User: pubeu - Total duration: 25s782ms - Times executed: 5 ]
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1325820' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 00:00:23 Duration: 5s414ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1312260' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 21:43:24 Duration: 5s155ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1404461' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-05-06 21:43:26 Duration: 5s142ms Database: ctdprd51 User: pubeu Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 4 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration May 06 12 4 0ms 0ms [ User: pubeu - Total duration: 3m28s - Times executed: 3 ]
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;
Date: Duration: 0ms Database: postgres
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Events
Log levels
Key values
- 8,215 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 6 ERROR entries
- 0 WARNING entries
- 7 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 7 Max number of times the same event was reported
- 13 Total events found
Rank Times reported Error 1 7 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #1
Day Hour Count May 06 13 4 14 2 15 1 2 1 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #2
Day Hour Count May 06 11 1 - ERROR: syntax error at or near "(" at character 55
Statement: SELECT SUBSTRING(nm, 1, 6) as pattern ,count(*) ( select nm from pub2.term_label tl where object_type_id = 4 and nm not in ( select nm from pub1.term_label where object_type_id = 4 ) ) group by pattern order by count(*) desc
Date: 2026-05-06 11:20:59
3 1 ERROR: subquery in FROM must have an alias
Times Reported Most Frequent Error / Event #3
Day Hour Count May 06 11 1 - ERROR: subquery in FROM must have an alias at character 63
Hint: For example, FROM (SELECT ...) [AS] foo.
Statement: SELECT SUBSTRING(nm, 1, 6) as pattern ,count(*) from ( select nm from pub2.term_label tl where object_type_id = 4 and nm not in ( select nm from pub1.term_label where object_type_id = 4 ) ) group by pattern order by count(*) descDate: 2026-05-06 11:21:11
4 1 ERROR: unterminated quoted string at or near "..."
Times Reported Most Frequent Error / Event #4
Day Hour Count May 06 11 1 - ERROR: unterminated quoted string at or near "'AC0ZRK%''" at character 52
Statement: select count(*) from pub2.term_label where nm like 'AC0ZRK%''
Date: 2026-05-06 11:15:50 Database: ctdprd51 Application: pgAdmin 4 - CONN:9784952 User: load Remote:
5 1 ERROR: missing FROM-clause entry for table "..."
Times Reported Most Frequent Error / Event #5
Day Hour Count May 06 10 1 - ERROR: missing FROM-clause entry for table "pub2" at character 156
Statement: select * --count(*) from pub2.term_label where object_type_id = 4 and nm not in ( select nm from pub1.term_label where object_type_id = 4 ) order by pub2.nm limit 1000
Date: 2026-05-06 10:54:30 Database: ctdprd51 Application: pgAdmin 4 - CONN:4053406 User: load Remote:
6 1 ERROR: syntax error at end of input
Times Reported Most Frequent Error / Event #6
Day Hour Count May 06 10 1 - ERROR: syntax error at end of input at character 124
Statement: select remote_addr, count(*) from log_query where query_tm >= '20260423' group by remote_addr order by count(*) desc limit
Date: 2026-05-06 10:54:45 Database: ctdprd51 Application: pgAdmin 4 - CONN:1946658 User: pubc Remote:
7 1 ERROR: relation "..." does not exist
Times Reported Most Frequent Error / Event #7
Day Hour Count May 06 12 1 - ERROR: relation "db" does not exist at character 58
Statement: SELECT r.acc_txt AS reference_acc_txt ,(SELECT id FROM db WHERE cd = r.acc_db_cd) AS reference_acc_db_id ,COALESCE(common.email_substr(r.affiliation_txt), common.email_substr(r.abstract_txt)) AS email_addr ,'D' AS source_cd ,'twiegers' AS create_by ,CURRENT_TIMESTAMP AS create_tm ,'twiegers' AS mod_by ,CURRENT_TIMESTAMP AS mod_tm -- !! CHANGE PUB SCHEMA QUALIFIER TO LIVE/QA SCHEMA !! FROM pub2.reference r WHERE NOT EXISTS (SELECT 1 FROM edit.reference_contact rc WHERE rc.reference_acc_txt = r.acc_txt) AND COALESCE(common.email_substr(r.affiliation_txt), common.email_substr(r.abstract_txt)) IS NOT NULL AND (r.has_diseases OR r.has_ixns OR r.has_exposures OR r.has_phenotypes) -- Curated only! (i.e., no BioGRID refs) ORDER BY email_addr;
Date: 2026-05-06 12:36:22 Database: ctdprd51 Application: pgAdmin 4 - CONN:9784952 User: load Remote: