pgBadger-
Global information
- Generated on Sun Jun 7 04:15:04 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260606
- Parsed 15,535 log entries in 2s
- Log start from 2026-06-06 00:00:01 to 2026-06-06 23:58:52
-
Overview
Global Stats
- 64 Number of unique normalized queries
- 66 Number of queries
- 1h46m29s Total query duration
- 2026-06-06 00:09:16 First query
- 2026-06-06 22:02:53 Last query
- 1 queries/s at 2026-06-06 18:10:30 Query peak
- 1h46m29s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 1h46m29s Execute total duration
- 1 Number of events
- 1 Number of unique normalized events
- 1 Max number of times the same event was reported
- 0 Number of cancellation
- 5 Total number of automatic vacuums
- 18 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 1,882 Total number of sessions
- 49 sessions at 2026-06-06 00:01:25 Session peak
- 40d2h22m39s Total duration of sessions
- 30m40s Average duration of sessions
- 0 Average queries per session
- 3s394ms Average queries duration per session
- 30m37s Average idle time per session
- 1,885 Total number of connections
- 9 connections/s at 2026-06-06 05:40:08 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 1 queries/s Query Peak
- 2026-06-06 18:10:30 Date
SELECT Traffic
Key values
- 1 queries/s Query Peak
- 2026-06-06 03:43:29 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-06-06 18:10:30 Date
Queries duration
Key values
- 1h46m29s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 06 00 2 0ms 9m15s 4m41s 0ms 0ms 9m22s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 2 0ms 10s315ms 10s222ms 0ms 0ms 20s445ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s615ms 5s554ms 0ms 5s494ms 5s615ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 5 0ms 5s529ms 5s351ms 5s286ms 5s411ms 5s529ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 33 0ms 27m7s 1m28s 1m21s 2m12s 27m7s 19 21 0ms 27m1s 2m14s 1m23s 2m13s 27m1s 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 1 0ms 19s215ms 19s215ms 0ms 0ms 19s215ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 06 00 1 0 9m15s 0ms 0ms 9m15s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 2 0 10s222ms 0ms 0ms 20s445ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s554ms 0ms 0ms 5s615ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 5 0 5s351ms 0ms 5s286ms 5s529ms 09 0 0 0ms 0ms 0ms 0ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 33 1m28s 54s912ms 1m21s 27m7s 19 0 21 2m14s 50s140ms 1m23s 27m1s 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 1 0 19s215ms 0ms 0ms 19s215ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jun 06 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jun 06 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 2 2.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 5 5.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 1 1.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second Jun 06 00 77 0.02/s 01 81 0.02/s 02 78 0.02/s 03 81 0.02/s 04 78 0.02/s 05 94 0.03/s 06 70 0.02/s 07 79 0.02/s 08 79 0.02/s 09 79 0.02/s 10 76 0.02/s 11 82 0.02/s 12 81 0.02/s 13 79 0.02/s 14 78 0.02/s 15 80 0.02/s 16 78 0.02/s 17 77 0.02/s 18 82 0.02/s 19 74 0.02/s 20 77 0.02/s 21 69 0.02/s 22 78 0.02/s 23 78 0.02/s Day Hour Count Average Duration Average idle time Jun 06 00 77 31m16s 31m9s 01 81 29m33s 29m33s 02 78 31m7s 31m7s 03 81 29m53s 29m53s 04 78 31m15s 31m15s 05 94 25m46s 25m46s 06 70 30m48s 30m48s 07 79 31m27s 31m27s 08 79 31m19s 31m18s 09 79 30m15s 30m15s 10 76 31m43s 31m43s 11 82 28m53s 28m53s 12 81 30m28s 30m28s 13 79 31m 31m 14 78 30m25s 30m25s 15 78 31m24s 31m24s 16 78 31m17s 31m17s 17 77 31m7s 31m7s 18 80 30m40s 30m4s 19 75 31m58s 31m20s 20 77 31m25s 31m25s 21 69 31m31s 31m31s 22 78 31m44s 31m44s 23 78 31m19s 31m19s -
Connections
Established Connections
Key values
- 9 connections Connection Peak
- 2026-06-06 05:40:08 Date
Connections per database
Key values
- ctdprd51 Main Database
- 1,885 connections Total
Connections per user
Key values
- qaeu Main User
- 1,885 connections Total
-
Sessions
Simultaneous sessions
Key values
- 49 sessions Session Peak
- 2026-06-06 00:01:25 Date
Histogram of session times
Key values
- 1,801 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 1,882 sessions Total
Sessions per user
Key values
- qaeu Main User
- 1,882 sessions Total
Sessions per host
Key values
- 10.12.5.45 Main Host
- 1,882 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 48,590 buffers Checkpoint Peak
- 2026-06-06 01:18:47 Date
- 1619.954 seconds Highest write time
- 0.001 seconds Sync time
Checkpoints Wal files
Key values
- 0 files Wal files usage Peak
- 2026-06-06 18:19:15 Date
Checkpoints distance
Key values
- 1,006.90 Mo Distance Peak
- 2026-06-06 01:18:47 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jun 06 00 572 57.384s 0.001s 57.39s 01 48,935 1,654.588s 0.003s 1,654.725s 02 279 28.126s 0.002s 28.135s 03 622 62.474s 0.002s 62.483s 04 85 8.692s 0.002s 8.7s 05 200 20.214s 0.002s 20.223s 06 147 14.919s 0.002s 14.927s 07 92 9.193s 0.002s 9.201s 08 244 24.622s 0.002s 24.631s 09 123 12.498s 0.002s 12.508s 10 188 19.017s 0.002s 19.025s 11 106 10.802s 0.002s 10.81s 12 140 14.221s 0.002s 14.278s 13 70 7.216s 0.002s 7.269s 14 71 7.288s 0.002s 7.296s 15 57 5.889s 0.002s 5.897s 16 72 7.387s 0.002s 7.395s 17 52 5.386s 0.002s 5.394s 18 47 4.898s 0.002s 4.906s 19 52 5.294s 0.001s 5.298s 20 23,490 1,623.73s 0.002s 1,623.738s 21 58 5.989s 0.002s 5.999s 22 74 7.59s 0.002s 7.599s 23 61 6.289s 0.002s 6.298s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jun 06 00 0 0 0 61 0.001s 0.001s 01 0 32 0 71 0.001s 0.003s 02 0 0 0 42 0.001s 0.002s 03 0 0 0 33 0.001s 0.002s 04 0 0 0 18 0.001s 0.002s 05 0 0 0 31 0.001s 0.002s 06 0 0 0 27 0.001s 0.002s 07 0 0 0 24 0.001s 0.002s 08 0 0 0 26 0.001s 0.002s 09 0 0 0 22 0.001s 0.002s 10 0 0 0 30 0.001s 0.002s 11 0 0 0 20 0.001s 0.002s 12 0 1 0 20 0.001s 0.002s 13 0 1 0 22 0.001s 0.002s 14 0 0 0 18 0.001s 0.002s 15 0 0 0 21 0.001s 0.002s 16 0 0 0 19 0.001s 0.002s 17 0 0 0 19 0.001s 0.002s 18 0 0 0 22 0.001s 0.002s 19 0 0 0 11 0.001s 0.001s 20 0 0 0 19 0.001s 0.002s 21 0 0 0 19 0.001s 0.002s 22 0 0 0 19 0.001s 0.002s 23 0 0 0 18 0.001s 0.002s Day Hour Count Avg time (sec) Jun 06 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jun 06 00 3,984.00 kB 19,137.00 kB 01 172,354.67 kB 465,770.00 kB 02 685.00 kB 357,259.00 kB 03 1,695.00 kB 289,726.50 kB 04 58.50 kB 234,688.50 kB 05 458.00 kB 190,149.50 kB 06 265.00 kB 154,107.00 kB 07 60.50 kB 124,839.00 kB 08 271.50 kB 101,167.00 kB 09 122.00 kB 81,968.00 kB 10 206.50 kB 66,438.00 kB 11 62.50 kB 53,827.00 kB 12 2,850.00 kB 43,890.00 kB 13 8,238.00 kB 37,368.00 kB 14 61.50 kB 30,279.50 kB 15 54.00 kB 24,535.50 kB 16 45.00 kB 19,883.50 kB 17 40.50 kB 16,114.50 kB 18 52.00 kB 13,062.00 kB 19 36.00 kB 11,143.00 kB 20 50.50 kB 9,534.00 kB 21 75.50 kB 7,736.50 kB 22 122.50 kB 6,287.50 kB 23 40.00 kB 5,103.50 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jun 06 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 0.11 sec Highest CPU-cost vacuum
Table pub1.term_set_enrichment
Database ctdprd51 - 2026-06-06 00:25:26 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 0.11 sec Highest CPU-cost vacuum
Table pub1.term_set_enrichment
Database ctdprd51 - 2026-06-06 00:25:26 Date
Analyzes per table
Key values
- pubc.log_query (16) Main table analyzed (database ctdprd51)
- 18 analyzes Total
Vacuums per table
Key values
- pubc.log_query (4) Main table vacuumed on database ctdprd51
- 5 vacuums Total
Tuples removed per table
Key values
- pubc.log_query (1820) Main table with removed tuples on database ctdprd51
- 1820 tuples Total removed
Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jun 06 00 3 7 01 1 5 02 0 3 03 0 0 04 0 0 05 0 1 06 0 1 07 1 0 08 0 0 09 0 0 10 0 1 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 0 - 0.11 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 11 Total read queries
- 54 Total write queries
Queries by database
Key values
- unknown Main database
- 57 Requests
- 1h35m53s (unknown)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 88 Requests
User Request type Count Duration editeu Total 11 2m13s select 11 2m13s postgres Total 9 9m4s copy to 9 9m4s pubc Total 1 9m15s select 1 9m15s pubeu Total 14 2m28s select 14 2m28s qaeu Total 2 11s203ms select 2 11s203ms unknown Total 88 1h42m14s copy to 81 1h41m25s others 1 6s621ms select 6 42s733ms Duration by user
Key values
- 1h42m14s (unknown) Main time consuming user
User Request type Count Duration editeu Total 11 2m13s select 11 2m13s postgres Total 9 9m4s copy to 9 9m4s pubc Total 1 9m15s select 1 9m15s pubeu Total 14 2m28s select 14 2m28s qaeu Total 2 11s203ms select 2 11s203ms unknown Total 88 1h42m14s copy to 81 1h41m25s others 1 6s621ms select 6 42s733ms Queries by host
Key values
- unknown Main host
- 125 Requests
- 2h5m27s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 64 Requests
- 1h36m54s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-06-06 20:00:10 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 47 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 27m7s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-06-06 18:44:55 ]
2 27m1s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-06-06 19:30:28 ]
3 9m15s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-06-06 00:09:16 - Database: ctdprd51 - User: pubc - Application: psql ]
4 6m51s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-06-06 19:42:57 ]
5 6m46s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-06-06 18:57:18 ]
6 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-06-06 19:46:56 ]
7 1m42s COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-06-06 18:48:28 ]
8 1m41s COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;[ Date: 2026-06-06 19:34:03 ]
9 1m21s COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-06-06 18:15:26 ]
10 1m18s COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;[ Date: 2026-06-06 19:01:04 ]
11 1m4s COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-06-06 19:02:10 ]
12 1m4s COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;[ Date: 2026-06-06 18:16:31 ]
13 1m1s COPY pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-06-06 19:44:28 ]
14 55s58ms COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-06-06 18:59:37 ]
15 54s912ms COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-06-06 18:13:55 ]
16 51s355ms COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-06-06 18:49:52 ]
17 50s140ms COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;[ Date: 2026-06-06 19:35:27 ]
18 46s199ms COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-06-06 19:31:19 ]
19 44s357ms COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;[ Date: 2026-06-06 18:45:44 ]
20 43s817ms COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;[ Date: 2026-06-06 18:12:15 ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 27m7s 1 27m7s 27m7s 27m7s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 06 18 1 27m7s 27m7s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:44:55 Duration: 27m7s
2 27m1s 1 27m1s 27m1s 27m1s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 06 19 1 27m1s 27m1s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 19:30:28 Duration: 27m1s
3 9m15s 1 9m15s 9m15s 9m15s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 06 00 1 9m15s 9m15s [ User: pubc - Total duration: 9m15s - Times executed: 1 ]
[ Application: psql - Total duration: 9m15s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-06-06 00:09:16 Duration: 9m15s Database: ctdprd51 User: pubc Application: psql
4 6m51s 1 6m51s 6m51s 6m51s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 06 19 1 6m51s 6m51s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 19:42:57 Duration: 6m51s
5 6m46s 1 6m46s 6m46s 6m46s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 06 18 1 6m46s 6m46s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 18:57:18 Duration: 6m46s
6 1m51s 1 1m51s 1m51s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 06 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-06-06 19:46:56 Duration: 1m51s
7 1m42s 1 1m42s 1m42s 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 06 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-06-06 18:48:28 Duration: 1m42s
8 1m41s 1 1m41s 1m41s 1m41s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 06 19 1 1m41s 1m41s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-06-06 19:34:03 Duration: 1m41s
9 1m21s 1 1m21s 1m21s 1m21s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 06 18 1 1m21s 1m21s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-06-06 18:15:26 Duration: 1m21s
10 1m18s 1 1m18s 1m18s 1m18s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 06 19 1 1m18s 1m18s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-06-06 19:01:04 Duration: 1m18s
11 1m4s 1 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 06 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-06-06 19:02:10 Duration: 1m4s
12 1m4s 1 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 06 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-06-06 18:16:31 Duration: 1m4s
13 1m1s 1 1m1s 1m1s 1m1s copy pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 06 19 1 1m1s 1m1s -
COPY pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 19:44:28 Duration: 1m1s
14 55s58ms 1 55s58ms 55s58ms 55s58ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 06 18 1 55s58ms 55s58ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:59:37 Duration: 55s58ms
15 54s912ms 1 54s912ms 54s912ms 54s912ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 06 18 1 54s912ms 54s912ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:13:55 Duration: 54s912ms
16 51s355ms 1 51s355ms 51s355ms 51s355ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 06 18 1 51s355ms 51s355ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-06-06 18:49:52 Duration: 51s355ms
17 50s140ms 1 50s140ms 50s140ms 50s140ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 06 19 1 50s140ms 50s140ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-06-06 19:35:27 Duration: 50s140ms
18 46s199ms 1 46s199ms 46s199ms 46s199ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 06 19 1 46s199ms 46s199ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-06-06 19:31:19 Duration: 46s199ms
19 44s357ms 1 44s357ms 44s357ms 44s357ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 06 18 1 44s357ms 44s357ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-06-06 18:45:44 Duration: 44s357ms
20 43s817ms 1 43s817ms 43s817ms 43s817ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 06 18 1 43s817ms 43s817ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-06-06 18:12:15 Duration: 43s817ms
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 2 20s445ms 10s130ms 10s315ms 10s222ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 06 03 2 20s445ms 10s222ms [ User: pubeu - Total duration: 20s445ms - Times executed: 2 ]
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2195410') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-06-06 03:43:31 Duration: 10s315ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2195410') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-06-06 03:43:29 Duration: 10s130ms Database: ctdprd51 User: pubeu Bind query: yes
2 2 11s109ms 5s494ms 5s615ms 5s554ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 06 05 2 11s109ms 5s554ms [ User: pubeu - Total duration: 5s615ms - Times executed: 1 ]
[ User: qaeu - Total duration: 5s494ms - Times executed: 1 ]
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1398646)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-06-06 05:48:45 Duration: 5s615ms Database: ctdprd51 User: pubeu Bind query: yes
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SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1398646)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-06-06 05:43:38 Duration: 5s494ms Database: ctdprd51 User: qaeu Bind query: yes
3 1 27m7s 27m7s 27m7s 27m7s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 06 18 1 27m7s 27m7s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:44:55 Duration: 27m7s
4 1 27m1s 27m1s 27m1s 27m1s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 06 19 1 27m1s 27m1s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 19:30:28 Duration: 27m1s
5 1 9m15s 9m15s 9m15s 9m15s select maint_query_logs_archive ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 06 00 1 9m15s 9m15s [ User: pubc - Total duration: 9m15s - Times executed: 1 ]
[ Application: psql - Total duration: 9m15s - Times executed: 1 ]
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/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-06-06 00:09:16 Duration: 9m15s Database: ctdprd51 User: pubc Application: psql
6 1 6m51s 6m51s 6m51s 6m51s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 06 19 1 6m51s 6m51s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 19:42:57 Duration: 6m51s
7 1 6m46s 6m46s 6m46s 6m46s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 06 18 1 6m46s 6m46s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 18:57:18 Duration: 6m46s
8 1 1m51s 1m51s 1m51s 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 06 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-06-06 19:46:56 Duration: 1m51s
9 1 1m42s 1m42s 1m42s 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 06 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-06-06 18:48:28 Duration: 1m42s
10 1 1m41s 1m41s 1m41s 1m41s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 06 19 1 1m41s 1m41s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-06-06 19:34:03 Duration: 1m41s
11 1 1m21s 1m21s 1m21s 1m21s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 06 18 1 1m21s 1m21s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-06-06 18:15:26 Duration: 1m21s
12 1 1m18s 1m18s 1m18s 1m18s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 06 19 1 1m18s 1m18s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-06-06 19:01:04 Duration: 1m18s
13 1 1m4s 1m4s 1m4s 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 06 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-06-06 19:02:10 Duration: 1m4s
14 1 1m4s 1m4s 1m4s 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 06 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-06-06 18:16:31 Duration: 1m4s
15 1 1m1s 1m1s 1m1s 1m1s copy pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 06 19 1 1m1s 1m1s -
COPY pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 19:44:28 Duration: 1m1s
16 1 55s58ms 55s58ms 55s58ms 55s58ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 06 18 1 55s58ms 55s58ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:59:37 Duration: 55s58ms
17 1 54s912ms 54s912ms 54s912ms 54s912ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 06 18 1 54s912ms 54s912ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:13:55 Duration: 54s912ms
18 1 51s355ms 51s355ms 51s355ms 51s355ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 06 18 1 51s355ms 51s355ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-06-06 18:49:52 Duration: 51s355ms
19 1 50s140ms 50s140ms 50s140ms 50s140ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 06 19 1 50s140ms 50s140ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-06-06 19:35:27 Duration: 50s140ms
20 1 46s199ms 46s199ms 46s199ms 46s199ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 06 19 1 46s199ms 46s199ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-06-06 19:31:19 Duration: 46s199ms
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 27m7s 27m7s 27m7s 1 27m7s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jun 06 18 1 27m7s 27m7s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:44:55 Duration: 27m7s
2 27m1s 27m1s 27m1s 1 27m1s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jun 06 19 1 27m1s 27m1s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 19:30:28 Duration: 27m1s
3 9m15s 9m15s 9m15s 1 9m15s select maint_query_logs_archive ();Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jun 06 00 1 9m15s 9m15s [ User: pubc - Total duration: 9m15s - Times executed: 1 ]
[ Application: psql - Total duration: 9m15s - Times executed: 1 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-06-06 00:09:16 Duration: 9m15s Database: ctdprd51 User: pubc Application: psql
4 6m51s 6m51s 6m51s 1 6m51s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jun 06 19 1 6m51s 6m51s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 19:42:57 Duration: 6m51s
5 6m46s 6m46s 6m46s 1 6m46s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jun 06 18 1 6m46s 6m46s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 18:57:18 Duration: 6m46s
6 1m51s 1m51s 1m51s 1 1m51s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jun 06 19 1 1m51s 1m51s -
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-06-06 19:46:56 Duration: 1m51s
7 1m42s 1m42s 1m42s 1 1m42s copy pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jun 06 18 1 1m42s 1m42s -
COPY pub1.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-06-06 18:48:28 Duration: 1m42s
8 1m41s 1m41s 1m41s 1 1m41s copy pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jun 06 19 1 1m41s 1m41s -
COPY pub2.phenotype_term_reference (id, phenotype_id, term_id, term_object_type_id, reference_id, taxon_id, ixn_id, evidence_cd, source_cd, source_acc_txt, source_acc_db_id, term_reference_id, via_term_id, via_term_object_type_id, network_score, mod_tm) TO stdout;
Date: 2026-06-06 19:34:03 Duration: 1m41s
9 1m21s 1m21s 1m21s 1 1m21s copy pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jun 06 18 1 1m21s 1m21s -
COPY pub1.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-06-06 18:15:26 Duration: 1m21s
10 1m18s 1m18s 1m18s 1 1m18s copy pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jun 06 19 1 1m18s 1m18s -
COPY pub2.dag_path (id, ancestor_dag_node_id, descendant_dag_node_id, ancestor_object_id, descendant_object_id, path_length, enumeration_txt) TO stdout;
Date: 2026-06-06 19:01:04 Duration: 1m18s
11 1m4s 1m4s 1m4s 1 1m4s copy pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jun 06 19 1 1m4s 1m4s -
COPY pub2.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-06-06 19:02:10 Duration: 1m4s
12 1m4s 1m4s 1m4s 1 1m4s copy pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jun 06 18 1 1m4s 1m4s -
COPY pub1.dag_path_step (dag_path_id, step_no, dag_node_id, dag_edge_type_id) TO stdout;
Date: 2026-06-06 18:16:31 Duration: 1m4s
13 1m1s 1m1s 1m1s 1 1m1s copy pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jun 06 19 1 1m1s 1m1s -
COPY pub2.term_set_enrichment_agent (term_ids_digest, enriched_object_type_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-06-06 19:44:28 Duration: 1m1s
14 55s58ms 55s58ms 55s58ms 1 55s58ms copy pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jun 06 18 1 55s58ms 55s58ms -
COPY pub2.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:59:37 Duration: 55s58ms
15 54s912ms 54s912ms 54s912ms 1 54s912ms copy pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jun 06 18 1 54s912ms 54s912ms -
COPY pub1.chem_disease_reference (id, chem_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_gene_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-06-06 18:13:55 Duration: 54s912ms
16 51s355ms 51s355ms 51s355ms 1 51s355ms copy pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jun 06 18 1 51s355ms 51s355ms -
COPY pub1.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-06-06 18:49:52 Duration: 51s355ms
17 50s140ms 50s140ms 50s140ms 1 50s140ms copy pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jun 06 19 1 50s140ms 50s140ms -
COPY pub2.term (id, object_type_id, acc_txt, acc_db_cd, nm, nm_sort, nm_html, secondary_nm, description, note, is_leaf, new_ixn_qty, ixn_qty, has_chems, has_diseases, has_genes, has_go, has_ixns, has_marrays, has_pathways, has_comps, has_references, has_exposures, has_phenotypes, curated_edge_qty, gene_edge_qty, nm_fts) TO stdout;
Date: 2026-06-06 19:35:27 Duration: 50s140ms
18 46s199ms 46s199ms 46s199ms 1 46s199ms copy pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jun 06 19 1 46s199ms 46s199ms -
COPY pub2.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-06-06 19:31:19 Duration: 46s199ms
19 44s357ms 44s357ms 44s357ms 1 44s357ms copy pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) to stdout;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jun 06 18 1 44s357ms 44s357ms -
COPY pub1.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not) TO stdout;
Date: 2026-06-06 18:45:44 Duration: 44s357ms
20 43s817ms 43s817ms 43s817ms 1 43s817ms copy load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jun 06 18 1 43s817ms 43s817ms -
COPY load.gene_go_annot (gene_id, go_term_id, taxon_id, evidence_cd, is_not, create_tm) TO stdout;
Date: 2026-06-06 18:12:15 Duration: 43s817ms
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
-
Events
Log levels
Key values
- 7,729 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 0 FATAL entries
- 1 ERROR entries
- 0 WARNING entries
- 0 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 1 Max number of times the same event was reported
- 1 Total events found
Rank Times reported Error 1 1 ERROR: syntax error at or near "..."
Times Reported Most Frequent Error / Event #1
Day Hour Count Jun 06 08 1 - ERROR: syntax error at or near ")" at character 4937
Statement: select distinct e.reference_acc_txt as "Reference", pref.abbr_authors_txt as "Author", referenceExp.author_summary as "AuthorSummary", (Select STRING_AGG( distinct eventproject.project_nm, '|')) as "AssociatedStudyTitles", eevent.collection_start_yr as "EnrollmentStartYear", eevent.collection_end_yr as "EnrollmentEndYear", (Select STRING_AGG( distinct studyFactor.nm, '|')) as "StudyFactors", (Select STRING_AGG(distinct stressorSrcType.nm, '|')) as "StressorSourceCategory", stressor.chem_term_nm as "ExposureStressorName", stressor.src_details as "StressorSourceDetails", stressor.sample_qty as "NumberOfStressorSamples", stressor.note as "StressorNotes", ereceptor.qty as "NumberOfReceptors", ereceptor.description as "Receptors", ereceptor.term_nm as "ReceptorDescription", ereceptor.term_acc_txt as "ReceptorID", ereceptor.note as "ReceptorNotes", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(receptorTobaccoUse.pct as int),0)) || '% ' || tobaccoUse.nm, COALESCE(COALESCE(NULLIF(CAST(receptorTobaccoUse.pct as int),0)) || '% ' , tobaccoUse.nm)), '|')) as "SmokingStatus", ereceptor.age || ' ' || age_uom.nm as "Age", age_qualifier.nm as "AgeQualifier", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(pct as int),0)) || '% ' || gender.nm, COALESCE(COALESCE(NULLIF(CAST(pct as int),0)) || '% ' , gender.nm)), '|') from exp_receptor_gender expgender left outer join gender on expgender.gender_id=gender.id where exp_receptor_id = ereceptor.id ) as "Sex", (Select STRING_AGG(distinct COALESCE( COALESCE(NULLIF(CAST(receptorRace.pct as int),0)) || '% ' || race.nm, COALESCE(COALESCE(NULLIF(CAST(receptorRace.pct as int),0)) || '% ' , race.nm)), '|')) as "Race", (Select STRING_AGG( distinct eventAssayMethod.nm, '|')) as "Methods" , eevent.detection_limit as "DetectionLimit", eevent.detection_limit_uom as "DetectionLimitUnitsOfMeasurement", eevent.detection_freq as "DetectionFrequency", emedium.nm as "Medium", eevent.exp_marker_term_nm as "ExposureMarker", eevent.exp_marker_lvl as "MarkerLevel", eevent.assay_uom as "MarkerUnitsOfMeasurement", eevent.assay_measurement_stat as "MarkerMeasurementStatistic", eevent.assay_note as "AssayNotes", (Select STRING_AGG( distinct country.nm, '|')) as "StudyCountries", (Select STRING_AGG( distinct eventLocation.geographic_region_nm, '|')) as "StateOrProvince", (Select STRING_AGG( distinct eventLocation.locality_txt, '|')) as "CityTownRegionOrArea", eevent.note as "ExposureEventNotes", eiot.description as "OutcomeRelationship", outcome.disease_term_nm as "DiseaseName", outcome.phenotype_action_degree_type_nm as "PhenotypeActionDegreeType", outcome.phenotype_term_nm as "PhenotypeName", (Select STRING_AGG( distinct expAnatomy.anatomy_term_nm, '|')) as "Anatomy", outcome.note as "ExposureOutcomeNotes" from exposure e left outer join reference pref on pref.acc_txt = e.reference_acc_txt left outer join reference_exp referenceExp on referenceExp.reference_acc_txt = e.reference_acc_txt left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id left outer join study_factor studyFactor on studyFactor.id = expStudyFactor.study_factor_id left outer join exp_event_project eventproject on eventproject.exp_event_id = e.exp_event_id inner join exp_stressor stressor on e.exp_stressor_id = stressor.id left outer join exp_receptor ereceptor on e.exp_receptor_id = ereceptor.id left outer join age_uom age_uom on ereceptor.age_uom_id = age_uom.id left outer join age_qualifier age_qualifier on ereceptor.age_qualifier_id = age_qualifier.id left outer join exp_event eevent on e.exp_event_id = eevent.id left outer join medium emedium on eevent.medium_id = emedium.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType on esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse on ereceptor.id = receptorTobaccoUse.exp_receptor_id left outer join tobacco_use tobaccoUse on receptorTobaccoUse.tobacco_use_id = tobaccoUse.id left outer join exp_receptor_race receptorRace on ereceptor.id = receptorRace.exp_receptor_id left outer join race race on receptorRace.race_id = race.id left outer join exp_event_location eventLocation on eevent.id = eventLocation.exp_event_id left outer join country on eventLocation.country_id = country.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join exp_anatomy expAnatomy on outcome.id = expAnatomy.exp_outcome_id left outer join exp_event_assay_method eventAssayMethod on eevent.id = eventAssayMethod.exp_event_id where stressor.chem_acc_txt in ( select acc_txt from term where id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( ))) or eevent.exp_marker_acc_txt in ( select acc_txt from term where id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( ))) group by "Reference", "Author", "AuthorSummary", "EnrollmentStartYear", "EnrollmentEndYear", "ExposureStressorName", "StressorSourceDetails", "NumberOfStressorSamples", "StressorNotes", "NumberOfReceptors", "Receptors", "ReceptorDescription", "ReceptorID", "ReceptorNotes", "Age", "AgeQualifier", "DetectionLimit", "DetectionLimitUnitsOfMeasurement", "DetectionFrequency", "Medium", "ExposureMarker", "MarkerLevel", "MarkerUnitsOfMeasurement", "MarkerMeasurementStatistic", "AssayNotes", "ExposureEventNotes", "OutcomeRelationship", "DiseaseName", "PhenotypeActionDegreeType", "PhenotypeName", "ExposureOutcomeNotes", ereceptor.id, eventLocation.exp_event_id
Date: 2026-06-06 08:24:19 Database: ctdprd51 Application: User: pubeu Remote: