pgBadger-
Global information
- Generated on Sun Jan 25 04:15:05 2026
- Log file: /project/archive/log/postgres/dbprd51/postgresql.log-20260124
- Parsed 116,445 log entries in 4s
- Log start from 2026-01-18 00:00:01 to 2026-01-24 23:59:59
-
Overview
Global Stats
- 91 Number of unique normalized queries
- 438 Number of queries
- 5h30m32s Total query duration
- 2026-01-18 00:09:12 First query
- 2026-01-24 21:38:50 Last query
- 7 queries/s at 2026-01-19 23:25:36 Query peak
- 5h30m32s Total query duration
- 0ms Prepare/parse total duration
- 0ms Bind total duration
- 5h30m32s Execute total duration
- 67 Number of events
- 13 Number of unique normalized events
- 22 Max number of times the same event was reported
- 0 Number of cancellation
- 23 Total number of automatic vacuums
- 140 Total number of automatic analyzes
- 0 Number temporary file
- 0 Max size of temporary file
- 0.00 B Average size of temporary file
- 14,104 Total number of sessions
- 65 sessions at 2026-01-19 23:27:05 Session peak
- 289d4h25m31s Total duration of sessions
- 29m31s Average duration of sessions
- 0 Average queries per session
- 1s406ms Average queries duration per session
- 29m30s Average idle time per session
- 14,104 Total number of connections
- 17 connections/s at 2026-01-21 01:35:32 Connection peak
- 2 Total number of databases
SQL Traffic
Key values
- 7 queries/s Query Peak
- 2026-01-19 23:25:36 Date
SELECT Traffic
Key values
- 7 queries/s Query Peak
- 2026-01-19 23:25:36 Date
INSERT/UPDATE/DELETE Traffic
Key values
- 1 queries/s Query Peak
- 2026-01-23 14:06:53 Date
Queries duration
Key values
- 5h30m32s Total query duration
Prepared queries ratio
Key values
- 0.00 Ratio of bind vs prepare
- 0.00 % Ratio between prepared and "usual" statements
General Activity
↑ Back to the top of the General Activity tableDay Hour Count Min duration Max duration Avg duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 18 00 4 0ms 9m10s 2m21s 0ms 10s58ms 9m17s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 1 0ms 27s259ms 27s259ms 0ms 0ms 27s259ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s368ms 5s250ms 0ms 5s132ms 5s368ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 1 0ms 10s989ms 10s989ms 0ms 0ms 10s989ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 1 0ms 1m29s 1m29s 0ms 0ms 1m29s 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 0 0ms 0ms 0ms 0ms 0ms 0ms 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 7 0ms 39s713ms 17s251ms 0ms 11s724ms 1m30s 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Jan 19 00 2 0ms 9m10s 4m38s 0ms 0ms 9m17s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 4 0ms 5s743ms 5s701ms 0ms 5s647ms 17s158ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s174ms 5s147ms 0ms 5s120ms 5s174ms 06 11 0ms 1m50s 20s647ms 20s686ms 45s639ms 1m50s 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 3 0ms 4m57s 1m45s 0ms 10s933ms 4m57s 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 10 0ms 1m50s 22s476ms 20s798ms 45s654ms 1m50s 11 1 0ms 9s282ms 9s282ms 0ms 0ms 9s282ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 9 0ms 1m50s 24s80ms 0ms 39s247ms 1m50s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 1m50s 24s39ms 0ms 39s334ms 1m50s 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 11 0ms 52s718ms 25s462ms 46s574ms 47s430ms 52s718ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 20 0ms 3m35s 23s382ms 27s327ms 27s851ms 3m35s Jan 20 00 4 0ms 9m11s 2m33s 0ms 27s335ms 9m18s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 2 0ms 5s755ms 5s672ms 0ms 0ms 5s755ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s302ms 5s240ms 0ms 0ms 5s302ms 06 13 0ms 3m23s 38s33ms 39s247ms 47s480ms 3m23s 07 1 0ms 22m32s 22m32s 0ms 0ms 22m32s 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 3 0ms 5s243ms 5s234ms 0ms 0ms 10s468ms 10 24 0ms 1m50s 14s938ms 24s337ms 39s347ms 1m50s 11 1 0ms 12m39s 12m39s 0ms 0ms 12m39s 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 10 0ms 1m50s 22s119ms 5s414ms 39s13ms 1m50s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 1m50s 24s28ms 0ms 39s117ms 1m50s 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 3 0ms 8s207ms 7s111ms 0ms 5s15ms 8s207ms 21 5 0ms 53s977ms 40s705ms 5s129ms 46s608ms 53s977ms 22 4 0ms 49s827ms 47s904ms 0ms 46s610ms 1m36s 23 0 0ms 0ms 0ms 0ms 0ms 0ms Jan 21 00 6 0ms 9m14s 1m57s 5s176ms 45s854ms 9m21s 01 4 0ms 51s665ms 50s132ms 0ms 47s321ms 1m42s 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 3 0ms 39s709ms 21s124ms 0ms 0ms 39s709ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 3 0ms 5s863ms 5s437ms 0ms 5s181ms 5s863ms 06 10 0ms 1m50s 22s249ms 6s422ms 39s86ms 1m50s 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 2 0ms 5s508ms 5s459ms 0ms 0ms 5s508ms 09 1 0ms 11s4ms 11s4ms 0ms 0ms 11s4ms 10 9 0ms 1m50s 24s102ms 0ms 39s371ms 1m50s 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 1 0ms 23s724ms 23s724ms 0ms 0ms 23s724ms 14 9 0ms 1m50s 24s84ms 0ms 39s361ms 1m50s 15 1 0ms 5s437ms 5s437ms 0ms 0ms 5s437ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 1m51s 24s184ms 0ms 39s217ms 1m51s 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Jan 22 00 6 0ms 9m15s 1m45s 0ms 27s382ms 9m22s 01 12 0ms 28s170ms 10s781ms 13s698ms 19s869ms 28s170ms 02 0 0ms 0ms 0ms 0ms 0ms 0ms 03 0 0ms 0ms 0ms 0ms 0ms 0ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s307ms 5s250ms 0ms 5s193ms 5s307ms 06 9 0ms 1m51s 24s173ms 0ms 39s678ms 1m51s 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 0 0ms 0ms 0ms 0ms 0ms 0ms 10 9 0ms 1m51s 24s224ms 20s901ms 45s688ms 1m51s 11 3 0ms 48s127ms 26s790ms 0ms 6s273ms 1m14s 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 9 0ms 1m50s 24s105ms 21s60ms 45s915ms 1m50s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 1 0ms 5s849ms 5s849ms 0ms 0ms 5s849ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 1m51s 24s206ms 20s989ms 45s989ms 1m51s 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 1 0ms 5s357ms 5s357ms 0ms 0ms 5s357ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 1 0ms 11s724ms 11s724ms 0ms 0ms 11s724ms 23 3 0ms 10s9ms 9s820ms 0ms 9s938ms 10s9ms Jan 23 00 2 0ms 9m14s 4m40s 0ms 0ms 9m20s 01 1 0ms 7s347ms 7s347ms 0ms 0ms 7s347ms 02 1 0ms 7s465ms 7s465ms 0ms 0ms 7s465ms 03 19 0ms 48s136ms 16s66ms 36s956ms 48s136ms 57s198ms 04 0 0ms 0ms 0ms 0ms 0ms 0ms 05 2 0ms 5s252ms 5s226ms 0ms 5s201ms 5s252ms 06 10 0ms 1m50s 22s181ms 20s626ms 45s610ms 1m50s 07 0 0ms 0ms 0ms 0ms 0ms 0ms 08 3 0ms 24s257ms 23s995ms 0ms 0ms 48s376ms 09 1 0ms 6s102ms 6s102ms 0ms 0ms 6s102ms 10 10 0ms 1m51s 22s314ms 5s220ms 39s553ms 1m51s 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 9 0ms 1m51s 24s168ms 0ms 39s648ms 1m51s 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 9 0ms 1m51s 24s225ms 0ms 39s598ms 1m51s 19 0 0ms 0ms 0ms 0ms 0ms 0ms 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 0 0ms 0ms 0ms 0ms 0ms 0ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Jan 24 00 3 0ms 9m17s 3m9s 0ms 0ms 9m24s 01 0 0ms 0ms 0ms 0ms 0ms 0ms 02 1 0ms 5s618ms 5s618ms 0ms 0ms 5s618ms 03 1 0ms 5s638ms 5s638ms 0ms 0ms 5s638ms 04 1 0ms 5s541ms 5s541ms 0ms 0ms 5s541ms 05 2 0ms 5s215ms 5s169ms 0ms 5s123ms 5s215ms 06 0 0ms 0ms 0ms 0ms 0ms 0ms 07 3 0ms 6s137ms 5s896ms 0ms 6s92ms 6s137ms 08 0 0ms 0ms 0ms 0ms 0ms 0ms 09 4 0ms 29s507ms 22s817ms 0ms 27s202ms 29s507ms 10 0 0ms 0ms 0ms 0ms 0ms 0ms 11 0 0ms 0ms 0ms 0ms 0ms 0ms 12 0 0ms 0ms 0ms 0ms 0ms 0ms 13 0 0ms 0ms 0ms 0ms 0ms 0ms 14 0 0ms 0ms 0ms 0ms 0ms 0ms 15 0 0ms 0ms 0ms 0ms 0ms 0ms 16 0 0ms 0ms 0ms 0ms 0ms 0ms 17 0 0ms 0ms 0ms 0ms 0ms 0ms 18 30 0ms 26m14s 1m35s 1m22s 2m10s 26m14s 19 23 0ms 26m24s 2m4s 1m42s 7m56s 27m6s 20 0 0ms 0ms 0ms 0ms 0ms 0ms 21 1 0ms 5s857ms 5s857ms 0ms 0ms 5s857ms 22 0 0ms 0ms 0ms 0ms 0ms 0ms 23 0 0ms 0ms 0ms 0ms 0ms 0ms Day Hour SELECT COPY TO Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 18 00 3 0 3m6s 0ms 0ms 9m10s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 1 0 27s259ms 0ms 0ms 27s259ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s250ms 0ms 0ms 5s368ms 06 0 0 0ms 0ms 0ms 0ms 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 1 0 10s989ms 0ms 0ms 10s989ms 10 0 0 0ms 0ms 0ms 0ms 11 1 0 1m29s 0ms 0ms 1m29s 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 0 0ms 0ms 0ms 0ms 19 0 0 0ms 0ms 0ms 0ms 20 7 0 17s251ms 0ms 0ms 1m30s 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Jan 19 00 1 0 9m10s 0ms 0ms 9m10s 01 0 0 0ms 0ms 0ms 0ms 02 0 0 0ms 0ms 0ms 0ms 03 4 0 5s701ms 0ms 0ms 17s158ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s147ms 0ms 0ms 5s174ms 06 2 9 20s647ms 0ms 20s686ms 1m50s 07 0 0 0ms 0ms 0ms 0ms 08 3 0 1m45s 0ms 0ms 4m57s 09 0 0 0ms 0ms 0ms 0ms 10 1 9 22s476ms 0ms 20s798ms 1m50s 11 1 0 9s282ms 0ms 0ms 9s282ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 9 24s80ms 0ms 0ms 1m50s 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 9 24s39ms 0ms 0ms 1m50s 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 11 0 25s462ms 0ms 46s574ms 52s718ms 22 0 0 0ms 0ms 0ms 0ms 23 20 0 23s382ms 5s277ms 27s327ms 1m17s Jan 20 00 3 0 3m22s 0ms 0ms 9m11s 01 0 0 0ms 0ms 0ms 0ms 02 2 0 5s672ms 0ms 0ms 5s755ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s240ms 0ms 0ms 5s302ms 06 4 9 38s33ms 0ms 39s247ms 3m23s 07 1 0 22m32s 0ms 0ms 22m32s 08 0 0 0ms 0ms 0ms 0ms 09 3 0 5s234ms 0ms 0ms 10s468ms 10 15 9 14s938ms 11s941ms 24s337ms 1m50s 11 1 0 12m39s 0ms 0ms 12m39s 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 1 9 22s119ms 0ms 5s414ms 1m50s 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 9 24s28ms 0ms 0ms 1m50s 19 0 0 0ms 0ms 0ms 0ms 20 3 0 7s111ms 0ms 0ms 8s207ms 21 5 0 40s705ms 0ms 5s129ms 53s977ms 22 4 0 47s904ms 0ms 0ms 1m36s 23 0 0 0ms 0ms 0ms 0ms Jan 21 00 5 0 2m19s 0ms 5s176ms 9m14s 01 4 0 50s132ms 0ms 0ms 1m42s 02 0 0 0ms 0ms 0ms 0ms 03 3 0 21s124ms 0ms 0ms 39s709ms 04 0 0 0ms 0ms 0ms 0ms 05 3 0 5s437ms 0ms 0ms 5s863ms 06 1 9 22s249ms 0ms 6s422ms 1m50s 07 0 0 0ms 0ms 0ms 0ms 08 2 0 5s459ms 0ms 0ms 5s508ms 09 1 0 11s4ms 0ms 0ms 11s4ms 10 0 9 24s102ms 0ms 0ms 1m50s 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 1 0 23s724ms 0ms 0ms 23s724ms 14 0 9 24s84ms 0ms 0ms 1m50s 15 1 0 5s437ms 0ms 0ms 5s437ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 9 24s184ms 0ms 0ms 1m51s 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Jan 22 00 5 0 2m5s 0ms 0ms 9m15s 01 12 0 10s781ms 0ms 13s698ms 28s170ms 02 0 0 0ms 0ms 0ms 0ms 03 0 0 0ms 0ms 0ms 0ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s250ms 0ms 0ms 5s307ms 06 0 9 24s173ms 0ms 0ms 1m51s 07 0 0 0ms 0ms 0ms 0ms 08 0 0 0ms 0ms 0ms 0ms 09 0 0 0ms 0ms 0ms 0ms 10 0 9 24s224ms 0ms 20s901ms 1m51s 11 3 0 26s790ms 0ms 0ms 1m14s 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 9 24s105ms 0ms 21s60ms 1m50s 15 0 0 0ms 0ms 0ms 0ms 16 1 0 5s849ms 0ms 0ms 5s849ms 17 0 0 0ms 0ms 0ms 0ms 18 0 9 24s206ms 0ms 20s989ms 1m51s 19 0 0 0ms 0ms 0ms 0ms 20 1 0 5s357ms 0ms 0ms 5s357ms 21 0 0 0ms 0ms 0ms 0ms 22 1 0 11s724ms 0ms 0ms 11s724ms 23 3 0 9s820ms 0ms 0ms 10s9ms Jan 23 00 1 0 9m14s 0ms 0ms 9m14s 01 1 0 7s347ms 0ms 0ms 7s347ms 02 1 0 7s465ms 0ms 0ms 7s465ms 03 19 0 16s66ms 5s341ms 36s956ms 57s198ms 04 0 0 0ms 0ms 0ms 0ms 05 2 0 5s226ms 0ms 0ms 5s252ms 06 1 9 22s181ms 0ms 20s626ms 1m50s 07 0 0 0ms 0ms 0ms 0ms 08 3 0 23s995ms 0ms 0ms 48s376ms 09 1 0 6s102ms 0ms 0ms 6s102ms 10 1 9 22s314ms 0ms 5s220ms 1m51s 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 9 24s168ms 0ms 0ms 1m51s 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 9 24s225ms 0ms 0ms 1m51s 19 0 0 0ms 0ms 0ms 0ms 20 0 0 0ms 0ms 0ms 0ms 21 0 0 0ms 0ms 0ms 0ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Jan 24 00 2 0 4m41s 0ms 0ms 9m17s 01 0 0 0ms 0ms 0ms 0ms 02 1 0 5s618ms 0ms 0ms 5s618ms 03 1 0 5s638ms 0ms 0ms 5s638ms 04 1 0 5s541ms 0ms 0ms 5s541ms 05 2 0 5s169ms 0ms 0ms 5s215ms 06 0 0 0ms 0ms 0ms 0ms 07 3 0 5s896ms 0ms 0ms 6s137ms 08 0 0 0ms 0ms 0ms 0ms 09 4 0 22s817ms 0ms 0ms 29s507ms 10 0 0 0ms 0ms 0ms 0ms 11 0 0 0ms 0ms 0ms 0ms 12 0 0 0ms 0ms 0ms 0ms 13 0 0 0ms 0ms 0ms 0ms 14 0 0 0ms 0ms 0ms 0ms 15 0 0 0ms 0ms 0ms 0ms 16 0 0 0ms 0ms 0ms 0ms 17 0 0 0ms 0ms 0ms 0ms 18 0 30 1m35s 56s637ms 1m22s 26m14s 19 0 23 2m4s 1m12s 1m42s 27m6s 20 0 0 0ms 0ms 0ms 0ms 21 1 0 5s857ms 0ms 0ms 5s857ms 22 0 0 0ms 0ms 0ms 0ms 23 0 0 0ms 0ms 0ms 0ms Day Hour INSERT UPDATE DELETE COPY FROM Average Duration Latency Percentile(90) Latency Percentile(95) Latency Percentile(99) Jan 18 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jan 19 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jan 20 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jan 21 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jan 22 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jan 23 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Jan 24 00 0 0 0 0 0ms 0ms 0ms 0ms 01 0 0 0 0 0ms 0ms 0ms 0ms 02 0 0 0 0 0ms 0ms 0ms 0ms 03 0 0 0 0 0ms 0ms 0ms 0ms 04 0 0 0 0 0ms 0ms 0ms 0ms 05 0 0 0 0 0ms 0ms 0ms 0ms 06 0 0 0 0 0ms 0ms 0ms 0ms 07 0 0 0 0 0ms 0ms 0ms 0ms 08 0 0 0 0 0ms 0ms 0ms 0ms 09 0 0 0 0 0ms 0ms 0ms 0ms 10 0 0 0 0 0ms 0ms 0ms 0ms 11 0 0 0 0 0ms 0ms 0ms 0ms 12 0 0 0 0 0ms 0ms 0ms 0ms 13 0 0 0 0 0ms 0ms 0ms 0ms 14 0 0 0 0 0ms 0ms 0ms 0ms 15 0 0 0 0 0ms 0ms 0ms 0ms 16 0 0 0 0 0ms 0ms 0ms 0ms 17 0 0 0 0 0ms 0ms 0ms 0ms 18 0 0 0 0 0ms 0ms 0ms 0ms 19 0 0 0 0 0ms 0ms 0ms 0ms 20 0 0 0 0 0ms 0ms 0ms 0ms 21 0 0 0 0 0ms 0ms 0ms 0ms 22 0 0 0 0 0ms 0ms 0ms 0ms 23 0 0 0 0 0ms 0ms 0ms 0ms Day Hour Prepare Bind Bind/Prepare Percentage of prepare Jan 18 00 0 2 2.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 1 1.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 1 1.00 0.00% 10 0 0 0.00 0.00% 11 0 1 1.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 7 7.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Jan 19 00 0 0 0.00 0.00% 01 0 0 0.00 0.00% 02 0 0 0.00 0.00% 03 0 4 4.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 2 2.00 0.00% 07 0 0 0.00 0.00% 08 0 3 3.00 0.00% 09 0 0 0.00 0.00% 10 0 1 1.00 0.00% 11 0 1 1.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 11 11.00 0.00% 22 0 0 0.00 0.00% 23 0 20 20.00 0.00% Jan 20 00 0 2 2.00 0.00% 01 0 0 0.00 0.00% 02 0 2 2.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 4 4.00 0.00% 07 0 1 1.00 0.00% 08 0 0 0.00 0.00% 09 0 3 3.00 0.00% 10 0 15 15.00 0.00% 11 0 1 1.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 1 1.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 3 3.00 0.00% 21 0 5 5.00 0.00% 22 0 4 4.00 0.00% 23 0 0 0.00 0.00% Jan 21 00 0 4 4.00 0.00% 01 0 4 4.00 0.00% 02 0 0 0.00 0.00% 03 0 3 3.00 0.00% 04 0 0 0.00 0.00% 05 0 3 3.00 0.00% 06 0 1 1.00 0.00% 07 0 0 0.00 0.00% 08 0 2 2.00 0.00% 09 0 1 1.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 1 1.00 0.00% 14 0 0 0.00 0.00% 15 0 1 1.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Jan 22 00 0 4 4.00 0.00% 01 0 12 12.00 0.00% 02 0 0 0.00 0.00% 03 0 0 0.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 0 0.00 0.00% 07 0 0 0.00 0.00% 08 0 0 0.00 0.00% 09 0 0 0.00 0.00% 10 0 0 0.00 0.00% 11 0 3 3.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 1 1.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 1 1.00 0.00% 21 0 0 0.00 0.00% 22 0 1 1.00 0.00% 23 0 3 3.00 0.00% Jan 23 00 0 0 0.00 0.00% 01 0 1 1.00 0.00% 02 0 1 1.00 0.00% 03 0 19 19.00 0.00% 04 0 0 0.00 0.00% 05 0 2 2.00 0.00% 06 0 1 1.00 0.00% 07 0 0 0.00 0.00% 08 0 3 3.00 0.00% 09 0 1 1.00 0.00% 10 0 1 1.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 0 0.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Jan 24 00 0 1 1.00 0.00% 01 0 0 0.00 0.00% 02 0 1 1.00 0.00% 03 0 1 1.00 0.00% 04 0 1 1.00 0.00% 05 0 2 2.00 0.00% 06 0 0 0.00 0.00% 07 0 3 3.00 0.00% 08 0 0 0.00 0.00% 09 0 4 4.00 0.00% 10 0 0 0.00 0.00% 11 0 0 0.00 0.00% 12 0 0 0.00 0.00% 13 0 0 0.00 0.00% 14 0 0 0.00 0.00% 15 0 0 0.00 0.00% 16 0 0 0.00 0.00% 17 0 0 0.00 0.00% 18 0 0 0.00 0.00% 19 0 0 0.00 0.00% 20 0 0 0.00 0.00% 21 0 1 1.00 0.00% 22 0 0 0.00 0.00% 23 0 0 0.00 0.00% Day Hour Count Average / Second Jan 18 00 83 0.02/s 01 81 0.02/s 02 82 0.02/s 03 104 0.03/s 04 83 0.02/s 05 95 0.03/s 06 76 0.02/s 07 77 0.02/s 08 77 0.02/s 09 82 0.02/s 10 76 0.02/s 11 77 0.02/s 12 79 0.02/s 13 79 0.02/s 14 82 0.02/s 15 87 0.02/s 16 81 0.02/s 17 76 0.02/s 18 79 0.02/s 19 78 0.02/s 20 167 0.05/s 21 73 0.02/s 22 81 0.02/s 23 78 0.02/s Jan 19 00 80 0.02/s 01 81 0.02/s 02 82 0.02/s 03 77 0.02/s 04 76 0.02/s 05 98 0.03/s 06 85 0.02/s 07 77 0.02/s 08 80 0.02/s 09 78 0.02/s 10 79 0.02/s 11 76 0.02/s 12 77 0.02/s 13 79 0.02/s 14 80 0.02/s 15 78 0.02/s 16 79 0.02/s 17 76 0.02/s 18 79 0.02/s 19 75 0.02/s 20 76 0.02/s 21 88 0.02/s 22 92 0.03/s 23 262 0.07/s Jan 20 00 91 0.03/s 01 76 0.02/s 02 80 0.02/s 03 76 0.02/s 04 77 0.02/s 05 101 0.03/s 06 79 0.02/s 07 76 0.02/s 08 82 0.02/s 09 79 0.02/s 10 99 0.03/s 11 79 0.02/s 12 81 0.02/s 13 78 0.02/s 14 80 0.02/s 15 71 0.02/s 16 77 0.02/s 17 77 0.02/s 18 79 0.02/s 19 78 0.02/s 20 77 0.02/s 21 109 0.03/s 22 80 0.02/s 23 77 0.02/s Jan 21 00 89 0.02/s 01 129 0.04/s 02 82 0.02/s 03 105 0.03/s 04 75 0.02/s 05 101 0.03/s 06 78 0.02/s 07 76 0.02/s 08 80 0.02/s 09 78 0.02/s 10 81 0.02/s 11 78 0.02/s 12 77 0.02/s 13 78 0.02/s 14 78 0.02/s 15 82 0.02/s 16 77 0.02/s 17 77 0.02/s 18 80 0.02/s 19 78 0.02/s 20 75 0.02/s 21 75 0.02/s 22 77 0.02/s 23 81 0.02/s Jan 22 00 103 0.03/s 01 113 0.03/s 02 80 0.02/s 03 78 0.02/s 04 83 0.02/s 05 95 0.03/s 06 83 0.02/s 07 83 0.02/s 08 74 0.02/s 09 75 0.02/s 10 77 0.02/s 11 81 0.02/s 12 76 0.02/s 13 80 0.02/s 14 80 0.02/s 15 75 0.02/s 16 78 0.02/s 17 75 0.02/s 18 82 0.02/s 19 75 0.02/s 20 80 0.02/s 21 70 0.02/s 22 78 0.02/s 23 101 0.03/s Jan 23 00 74 0.02/s 01 259 0.07/s 02 85 0.02/s 03 98 0.03/s 04 86 0.02/s 05 94 0.03/s 06 77 0.02/s 07 72 0.02/s 08 80 0.02/s 09 81 0.02/s 10 100 0.03/s 11 74 0.02/s 12 77 0.02/s 13 76 0.02/s 14 80 0.02/s 15 73 0.02/s 16 80 0.02/s 17 79 0.02/s 18 80 0.02/s 19 82 0.02/s 20 80 0.02/s 21 75 0.02/s 22 85 0.02/s 23 71 0.02/s Jan 24 00 74 0.02/s 01 76 0.02/s 02 78 0.02/s 03 79 0.02/s 04 78 0.02/s 05 97 0.03/s 06 79 0.02/s 07 76 0.02/s 08 79 0.02/s 09 92 0.03/s 10 111 0.03/s 11 83 0.02/s 12 76 0.02/s 13 81 0.02/s 14 78 0.02/s 15 77 0.02/s 16 79 0.02/s 17 78 0.02/s 18 80 0.02/s 19 78 0.02/s 20 75 0.02/s 21 71 0.02/s 22 71 0.02/s 23 76 0.02/s Day Hour Count Average Duration Average idle time Jan 18 00 83 29m2s 28m55s 01 81 30m34s 30m34s 02 82 29m7s 29m7s 03 104 23m35s 23m35s 04 83 28m31s 28m31s 05 95 24m58s 24m57s 06 76 30m23s 30m23s 07 77 30m36s 30m36s 08 77 31m39s 31m39s 09 81 30m31s 30m31s 10 76 31m24s 31m24s 11 81 2h52m37s 2h52m36s 12 79 31m3s 31m3s 13 79 30m59s 30m59s 14 82 29m56s 29m56s 15 87 27m32s 27m32s 16 81 29m49s 29m49s 17 76 31m29s 31m29s 18 79 30m41s 30m41s 19 78 30m33s 30m33s 20 167 14m8s 14m8s 21 73 29m40s 29m40s 22 81 30m7s 30m7s 23 78 31m23s 31m23s Jan 19 00 80 29m48s 29m41s 01 81 29m26s 29m26s 02 82 29m39s 29m39s 03 77 31m32s 31m31s 04 76 29m46s 29m46s 05 98 25m22s 25m22s 06 85 28m1s 27m59s 07 77 31m16s 31m16s 08 80 29m42s 29m38s 09 78 31m5s 31m5s 10 79 29m59s 29m56s 11 76 32m15s 32m15s 12 77 32m3s 32m3s 13 79 30m34s 30m34s 14 80 30m25s 30m22s 15 78 31m24s 31m24s 16 79 30m53s 30m53s 17 76 31m6s 31m6s 18 79 30m26s 30m24s 19 75 31m37s 31m37s 20 76 31m25s 31m25s 21 88 25m35s 25m32s 22 92 26m44s 26m44s 23 262 9m55s 9m53s Jan 20 00 91 25m57s 25m50s 01 76 32m19s 32m19s 02 80 29m51s 29m51s 03 76 28m57s 28m57s 04 77 30m56s 30m56s 05 101 25m25s 25m25s 06 79 29m23s 29m17s 07 76 31m41s 31m23s 08 82 30m31s 30m31s 09 79 30m35s 30m35s 10 96 25m28s 25m24s 11 79 31m4s 30m54s 12 81 29m16s 29m16s 13 78 31m41s 31m41s 14 80 29m53s 29m50s 15 71 32m21s 32m21s 16 77 31m49s 31m49s 17 77 31m27s 31m27s 18 79 30m26s 30m24s 19 78 30m21s 30m21s 20 77 31m38s 31m38s 21 109 22m10s 22m8s 22 80 29m42s 29m40s 23 77 31m6s 31m6s Jan 21 00 88 27m4s 26m56s 01 130 18m27s 18m25s 02 82 27m31s 27m31s 03 105 23m26s 23m26s 04 75 31m9s 31m9s 05 101 24m26s 24m26s 06 78 30m12s 30m9s 07 76 31m58s 31m58s 08 80 30m20s 30m20s 09 78 30m43s 30m43s 10 81 29m57s 29m54s 11 78 31m3s 31m3s 12 77 31m35s 31m35s 13 78 31m 31m 14 78 30m33s 30m30s 15 82 29m52s 29m52s 16 77 31m28s 31m28s 17 77 31m12s 31m12s 18 80 30m46s 30m43s 19 78 30m43s 30m43s 20 75 31m35s 31m35s 21 75 30m16s 30m16s 22 77 31m38s 31m38s 23 81 29m37s 29m37s Jan 22 00 102 23m41s 23m35s 01 114 20m15s 20m14s 02 80 30m10s 30m10s 03 78 30m24s 30m24s 04 83 29m18s 29m18s 05 95 25m29s 25m29s 06 83 29m46s 29m44s 07 83 29m25s 29m25s 08 74 32m6s 32m6s 09 75 31m4s 31m4s 10 77 31m44s 31m41s 11 81 30m26s 30m25s 12 76 31m13s 31m13s 13 80 30m56s 30m56s 14 80 28m4s 28m1s 15 75 33m7s 33m7s 16 78 31m35s 31m35s 17 75 31m32s 31m32s 18 82 29m58s 29m56s 19 75 30m56s 30m56s 20 80 29m10s 29m10s 21 70 31m35s 31m35s 22 78 32m50s 32m50s 23 101 22m47s 22m46s Jan 23 00 74 31m33s 31m26s 01 259 9m38s 9m38s 02 85 28m21s 28m21s 03 98 25m19s 25m16s 04 86 27m52s 27m52s 05 94 25m50s 25m50s 06 77 30m2s 29m59s 07 72 31m23s 31m23s 08 80 31m55s 31m54s 09 81 30m10s 30m10s 10 97 25m22s 25m20s 11 74 32m34s 32m34s 12 77 31m48s 31m48s 13 76 31m56s 31m56s 14 80 30m14s 30m11s 15 73 31m33s 31m33s 16 81 31m44s 31m44s 17 79 32m 32m 18 82 41m27s 41m24s 19 82 30m17s 30m17s 20 80 30m29s 30m29s 21 75 31m21s 31m21s 22 85 28m23s 28m23s 23 71 31m41s 31m41s Jan 24 00 74 31m31s 31m23s 01 76 31m37s 31m37s 02 78 31m3s 31m3s 03 79 31m2s 31m2s 04 78 31m5s 31m5s 05 97 24m58s 24m58s 06 79 30m21s 30m21s 07 76 31m24s 31m24s 08 79 31m12s 31m12s 09 92 25m49s 25m48s 10 111 22m8s 22m8s 11 83 30m7s 30m7s 12 76 31m15s 31m15s 13 81 30m39s 30m39s 14 78 31m8s 31m8s 15 77 30m56s 30m56s 16 79 30m41s 30m41s 17 78 30m49s 30m49s 18 79 29m59s 29m23s 19 79 31m35s 30m59s 20 75 30m48s 30m48s 21 71 31m10s 31m10s 22 71 30m52s 30m52s 23 76 31m45s 31m45s -
Connections
Established Connections
Key values
- 17 connections Connection Peak
- 2026-01-21 01:35:32 Date
Connections per database
Key values
- ctdprd51 Main Database
- 14,104 connections Total
Connections per user
Key values
- pubeu Main User
- 14,104 connections Total
-
Sessions
Simultaneous sessions
Key values
- 65 sessions Session Peak
- 2026-01-19 23:27:05 Date
Histogram of session times
Key values
- 12,524 1800000-3600000ms duration
Sessions per database
Key values
- ctdprd51 Main Database
- 14,104 sessions Total
Sessions per user
Key values
- pubeu Main User
- 14,104 sessions Total
Sessions per host
Key values
- 10.12.5.53 Main Host
- 14,104 sessions Total
Host Count Total Duration Average Duration 10.12.5.45 2,695 55d23h52m46s 29m55s 10.12.5.46 2,624 55d21h11m49s 30m40s 10.12.5.53 3,521 56d5h19m22s 22m59s 10.12.5.54 2,620 55d23h38m32s 30m46s 10.12.5.55 2,590 55d23h34m3s 31m7s 192.168.201.10 4 22h47m21s 5h41m50s 192.168.201.14 4 8d1h7m27s 2d16m51s 192.168.201.6 1 1s448ms 1s448ms ::1 43 2h54m3s 4m2s [local] 2 2s400ms 1s200ms Sessions per application
Key values
- unknown Main Application
- 14,104 sessions Total
-
Checkpoints / Restartpoints
Checkpoints Buffers
Key values
- 134,749 buffers Checkpoint Peak
- 2026-01-21 04:46:04 Date
- 1620.024 seconds Highest write time
- 0.005 seconds Sync time
Checkpoints Wal files
Key values
- 36 files Wal files usage Peak
- 2026-01-20 05:16:01 Date
Checkpoints distance
Key values
- 1,135.18 Mo Distance Peak
- 2026-01-24 10:46:12 Date
Checkpoints Activity
↑ Back to the top of the Checkpoint Activity tableDay Hour Written buffers Write time Sync time Total time Jan 18 00 239 24.029s 0.002s 24.085s 01 51,631 1,628.4s 0.005s 1,628.904s 02 144 14.598s 0.002s 14.63s 03 137 13.903s 0.002s 13.933s 04 574 57.669s 0.003s 57.752s 05 141 14.309s 0.002s 14.339s 06 68 6.988s 0.002s 7.018s 07 209 21.112s 0.002s 21.141s 08 389 39.143s 0.002s 39.172s 09 343 34.53s 0.002s 34.56s 10 373 37.536s 0.002s 37.566s 11 38 3.976s 0.002s 4.007s 12 92 9.386s 0.002s 9.416s 13 113,075 1,621.703s 0.003s 1,622.193s 14 4,336 434.207s 0.003s 434.315s 15 3,517 352.077s 0.003s 352.227s 16 21 2.181s 0.001s 2.195s 17 87,641 3,239.567s 0.004s 3,240.085s 18 6 0.696s 0.001s 0.711s 19 10 1.099s 0.001s 1.114s 20 34 3.592s 0.003s 3.623s 21 130 13.194s 0.002s 13.225s 22 58 5.995s 0.002s 6.024s 23 31 3.276s 0.002s 3.306s Jan 19 00 324 32.553s 0.002s 32.609s 01 31,784 1,632.566s 0.003s 1,632.683s 02 2,969 297.53s 0.003s 297.585s 03 386 38.84s 0.002s 38.869s 04 176 17.807s 0.002s 17.835s 05 5,598 560.646s 0.003s 560.748s 06 214 21.653s 0.002s 21.683s 07 1,559 156.316s 0.003s 156.361s 08 489 49.166s 0.002s 49.197s 09 296 29.834s 0.002s 29.865s 10 199 20.117s 0.002s 20.195s 11 364 36.64s 0.002s 36.668s 12 114 11.616s 0.002s 11.645s 13 39 4.073s 0.002s 4.102s 14 32 3.38s 0.002s 3.41s 15 19 2.074s 0.002s 2.103s 16 16 1.688s 0.001s 1.703s 17 23 2.474s 0.002s 2.504s 18 3,995 400.031s 0.003s 400.12s 19 233 23.51s 0.002s 23.538s 20 63 6.48s 0.002s 6.509s 21 2,289 229.436s 0.003s 229.511s 22 1,578 158.254s 0.003s 158.285s 23 330 33.263s 0.002s 33.294s Jan 20 00 366 36.868s 0.003s 36.995s 01 4,422 442.899s 0.003s 442.966s 02 611 61.396s 0.002s 61.427s 03 130 13.1s 0.002s 13.129s 04 980 98.309s 0.002s 98.325s 05 53,497 1,668.698s 0.005s 1,669.21s 06 456 45.886s 0.002s 45.917s 07 1,574 157.73s 0.003s 157.762s 08 70,554 1,621.515s 0.003s 1,621.948s 09 1,147 115.051s 0.003s 115.13s 10 436 43.75s 0.002s 43.78s 11 638 64.096s 0.003s 64.126s 12 296 29.824s 0.003s 29.854s 13 51 5.278s 0.002s 5.307s 14 2,084 208.768s 0.003s 208.844s 15 231 23.308s 0.002s 23.338s 16 2,786 279.192s 0.002s 279.27s 17 545 54.759s 0.003s 54.835s 18 8 0.985s 0.001s 1s 19 8 0.886s 0.001s 0.9s 20 38 3.978s 0.002s 4.007s 21 181 18.314s 0.002s 18.345s 22 64 6.587s 0.002s 6.616s 23 151 15.301s 0.002s 15.331s Jan 21 00 521 52.368s 0.004s 52.439s 01 100 10.204s 0.002s 10.234s 02 4,284 429.233s 0.003s 429.331s 03 490 49.248s 0.002s 49.324s 04 134,749 1,619.002s 0.002s 1,619.42s 05 207 20.863s 0.002s 20.894s 06 251 25.336s 0.002s 25.415s 07 144 14.596s 0.002s 14.626s 08 1,107 110.957s 0.002s 110.972s 09 8,677 869.114s 0.004s 869.253s 10 3,502 350.797s 0.003s 350.888s 11 264 26.62s 0.002s 26.652s 12 120 12.188s 0.002s 12.219s 13 38 3.981s 0.002s 4.01s 14 26 2.769s 0.002s 2.798s 15 32 3.403s 0.002s 3.433s 16 156 15.792s 0.002s 15.822s 17 30 3.18s 0.002s 3.209s 18 14 1.59s 0.002s 1.621s 19 24 2.566s 0.002s 2.596s 20 1,646 165.07s 0.003s 165.118s 21 52 5.379s 0.002s 5.408s 22 51 5.28s 0.002s 5.311s 23 126 12.798s 0.002s 12.828s Jan 22 00 739 74.124s 0.003s 74.196s 01 537 54.033s 0.002s 54.064s 02 13,562 1,357.58s 0.003s 1,357.822s 03 9,962 997.381s 0.002s 997.486s 04 187 18.914s 0.002s 18.944s 05 355 35.743s 0.003s 35.773s 06 330 33.243s 0.003s 33.273s 07 372 37.44s 0.002s 37.469s 08 2,943 294.834s 0.003s 294.929s 09 105 10.606s 0.002s 10.635s 10 215 21.725s 0.002s 21.753s 11 282 28.415s 0.002s 28.445s 12 5,524 553.137s 0.003s 553.246s 13 65 6.682s 0.002s 6.712s 14 1,501 150.489s 0.003s 150.537s 15 1,393 139.701s 0.003s 139.731s 16 145 14.711s 0.002s 14.74s 17 62 6.384s 0.002s 6.414s 18 24 2.577s 0.002s 2.606s 19 15 1.585s 0.001s 1.599s 20 1,107 111.029s 0.003s 111.11s 21 246 24.81s 0.002s 24.84s 22 5,486 549.31s 0.003s 549.416s 23 152 15.409s 0.002s 15.441s Jan 23 00 404 40.653s 0.004s 40.725s 01 75 7.741s 0.002s 7.772s 02 5,580 558.755s 0.002s 558.878s 03 384 38.639s 0.002s 38.667s 04 356 35.838s 0.002s 35.867s 05 501 50.381s 0.003s 50.41s 06 336 33.838s 0.002s 33.87s 07 23,796 2,269.623s 0.004s 2,269.847s 08 127 12.902s 0.002s 12.932s 09 37 3.788s 0.001s 3.803s 10 65,279 1,649.413s 0.007s 1,649.919s 11 499 50.169s 0.002s 50.2s 12 246 24.832s 0.002s 24.861s 13 225 22.731s 0.002s 22.76s 14 39 4.084s 0.002s 4.114s 15 27 2.872s 0.002s 2.902s 16 268 27.023s 0.002s 27.053s 17 646 64.877s 0.002s 64.908s 18 47 4.884s 0.002s 4.915s 19 23 2.477s 0.002s 2.507s 20 24 2.576s 0.002s 2.608s 21 44 4.615s 0.002s 4.646s 22 4,060 406.484s 0.002s 406.563s 23 56,708 2,013.21s 0.003s 2,013.747s Jan 24 00 1,141 114.466s 0.003s 114.539s 01 1,073 107.562s 0.002s 107.64s 02 146 14.802s 0.002s 14.831s 03 79 8.088s 0.002s 8.117s 04 1,413 141.702s 0.003s 141.733s 05 117 11.92s 0.002s 11.952s 06 100 10.193s 0.002s 10.27s 07 98 9.991s 0.002s 10.021s 08 4,549 455.66s 0.003s 455.717s 09 174 17.628s 0.002s 17.66s 10 52,818 1,621.511s 0.003s 1,621.982s 11 900 90.318s 0.002s 90.349s 12 245 24.696s 0.002s 24.727s 13 1,796 180.074s 0.002s 180.149s 14 32 3.372s 0.002s 3.402s 15 0 0s 0s 0s 16 17 1.87s 0.002s 1.899s 17 200 20.191s 0.002s 20.221s 18 6 0.781s 0.001s 0.796s 19 0 0s 0s 0s 20 65,986 1,621.384s 0.003s 1,621.415s 21 34 3.476s 0.002s 3.506s 22 933 93.615s 0.002s 93.694s 23 59 6.078s 0.002s 6.107s Day Hour Added Removed Recycled Synced files Longest sync Average sync Jan 18 00 0 0 0 43 0.001s 0.001s 01 0 0 34 39 0.001s 0.003s 02 0 0 0 32 0.001s 0.002s 03 0 0 0 30 0.001s 0.002s 04 0 0 1 35 0.001s 0.002s 05 0 0 0 26 0.001s 0.002s 06 0 0 0 21 0.001s 0.002s 07 0 0 0 78 0.001s 0.002s 08 0 0 0 131 0.001s 0.002s 09 0 0 0 120 0.001s 0.002s 10 0 0 0 105 0.001s 0.002s 11 0 0 0 16 0.001s 0.002s 12 0 0 0 23 0.001s 0.002s 13 0 0 35 40 0.001s 0.002s 14 0 0 3 33 0.001s 0.002s 15 0 0 3 30 0.001s 0.002s 16 0 0 0 9 0.001s 0.001s 17 0 31 29 39 0.001s 0.002s 18 0 0 0 6 0.001s 0.001s 19 0 0 0 6 0.001s 0.001s 20 0 0 0 16 0.001s 0.002s 21 0 0 0 28 0.001s 0.002s 22 0 0 0 19 0.001s 0.002s 23 0 0 0 15 0.001s 0.002s Jan 19 00 0 0 0 54 0.001s 0.001s 01 0 0 3 55 0.001s 0.003s 02 0 0 2 54 0.001s 0.002s 03 0 0 0 47 0.001s 0.002s 04 0 0 0 33 0.001s 0.002s 05 0 0 3 48 0.001s 0.002s 06 0 0 0 42 0.001s 0.002s 07 0 0 1 85 0.001s 0.002s 08 0 0 0 135 0.001s 0.002s 09 0 0 0 108 0.001s 0.002s 10 0 0 1 68 0.001s 0.002s 11 0 0 0 125 0.001s 0.002s 12 0 0 0 60 0.001s 0.002s 13 0 0 0 17 0.001s 0.002s 14 0 0 0 21 0.001s 0.002s 15 0 0 0 12 0.001s 0.002s 16 0 0 0 8 0.001s 0.001s 17 0 0 0 12 0.001s 0.002s 18 0 0 2 35 0.001s 0.002s 19 0 0 0 30 0.001s 0.002s 20 0 0 0 22 0.001s 0.002s 21 0 0 1 41 0.001s 0.002s 22 0 0 0 35 0.001s 0.002s 23 0 0 0 35 0.001s 0.002s Jan 20 00 0 0 1 60 0.001s 0.002s 01 0 0 3 38 0.001s 0.002s 02 0 0 0 42 0.001s 0.002s 03 0 0 0 29 0.001s 0.002s 04 0 0 0 32 0.001s 0.001s 05 0 0 36 63 0.001s 0.003s 06 0 0 0 127 0.001s 0.002s 07 0 0 0 143 0.001s 0.002s 08 0 0 31 84 0.001s 0.002s 09 0 0 1 38 0.001s 0.002s 10 0 0 0 43 0.001s 0.002s 11 0 0 0 87 0.001s 0.002s 12 0 0 0 78 0.001s 0.002s 13 0 0 0 18 0.001s 0.002s 14 0 0 1 79 0.001s 0.002s 15 0 0 0 102 0.001s 0.002s 16 0 0 1 37 0.001s 0.002s 17 0 0 1 29 0.001s 0.002s 18 0 0 0 6 0.001s 0.001s 19 0 0 0 6 0.001s 0.001s 20 0 0 0 13 0.001s 0.002s 21 0 0 0 30 0.001s 0.002s 22 0 0 0 18 0.001s 0.002s 23 0 0 0 28 0.001s 0.002s Jan 21 00 0 0 0 64 0.001s 0.002s 01 0 0 0 28 0.001s 0.002s 02 0 0 2 65 0.001s 0.002s 03 0 0 1 42 0.001s 0.002s 04 0 0 31 26 0.001s 0.001s 05 0 0 0 40 0.001s 0.002s 06 0 0 1 81 0.001s 0.002s 07 0 0 0 65 0.001s 0.002s 08 0 0 0 27 0.001s 0.001s 09 0 0 5 98 0.001s 0.003s 10 0 0 2 51 0.001s 0.002s 11 0 0 0 91 0.001s 0.002s 12 0 0 0 28 0.001s 0.002s 13 0 0 0 19 0.001s 0.002s 14 0 0 0 18 0.001s 0.002s 15 0 0 0 16 0.001s 0.002s 16 0 0 0 23 0.001s 0.002s 17 0 0 0 14 0.001s 0.002s 18 0 0 0 12 0.001s 0.002s 19 0 0 0 13 0.001s 0.002s 20 0 0 1 36 0.001s 0.002s 21 0 0 0 17 0.001s 0.002s 22 0 0 0 17 0.001s 0.002s 23 0 0 0 27 0.001s 0.002s Jan 22 00 0 0 0 82 0.001s 0.002s 01 0 0 0 40 0.001s 0.002s 02 0 0 12 61 0.001s 0.002s 03 0 0 3 50 0.001s 0.002s 04 0 0 0 37 0.001s 0.002s 05 0 0 0 45 0.001s 0.002s 06 0 0 0 91 0.001s 0.002s 07 0 0 0 121 0.001s 0.002s 08 0 0 2 138 0.001s 0.002s 09 0 0 0 56 0.001s 0.002s 10 0 0 0 77 0.001s 0.002s 11 0 0 0 109 0.001s 0.002s 12 0 0 3 50 0.001s 0.002s 13 0 0 0 18 0.001s 0.002s 14 0 0 1 77 0.001s 0.002s 15 0 0 0 135 0.001s 0.002s 16 0 0 0 62 0.001s 0.002s 17 0 0 0 25 0.001s 0.002s 18 0 0 0 17 0.001s 0.002s 19 0 0 0 8 0.001s 0.001s 20 0 0 1 40 0.001s 0.002s 21 0 0 0 30 0.001s 0.002s 22 0 0 3 40 0.001s 0.002s 23 0 0 0 21 0.001s 0.002s Jan 23 00 0 0 0 65 0.001s 0.002s 01 0 0 0 26 0.001s 0.002s 02 0 0 4 45 0.001s 0.002s 03 0 0 0 33 0.001s 0.002s 04 0 0 0 35 0.001s 0.002s 05 0 0 0 35 0.001s 0.002s 06 0 0 0 78 0.001s 0.002s 07 0 0 16 154 0.001s 0.002s 08 0 0 0 25 0.001s 0.002s 09 0 0 0 11 0.001s 0.001s 10 0 0 34 148 0.001s 0.002s 11 0 0 0 110 0.001s 0.002s 12 0 0 0 108 0.001s 0.002s 13 0 0 0 66 0.001s 0.002s 14 0 0 0 23 0.001s 0.002s 15 0 0 0 15 0.001s 0.002s 16 0 0 0 76 0.001s 0.002s 17 0 0 0 14 0.001s 0.002s 18 0 0 0 20 0.001s 0.002s 19 0 0 0 13 0.001s 0.002s 20 0 0 0 13 0.001s 0.002s 21 0 0 0 15 0.001s 0.002s 22 0 0 2 18 0.002s 0.001s 23 0 0 37 55 0.001s 0.003s Jan 24 00 0 0 0 61 0.001s 0.002s 01 0 0 1 46 0.001s 0.002s 02 0 0 0 37 0.001s 0.002s 03 0 0 0 23 0.001s 0.002s 04 0 0 0 40 0.001s 0.002s 05 0 0 0 25 0.001s 0.002s 06 0 0 1 28 0.001s 0.002s 07 0 0 0 26 0.001s 0.002s 08 0 0 2 41 0.001s 0.002s 09 0 0 0 27 0.001s 0.002s 10 0 0 36 41 0.001s 0.002s 11 0 0 0 24 0.001s 0.002s 12 0 0 0 26 0.001s 0.002s 13 0 0 1 32 0.001s 0.002s 14 0 0 0 15 0.001s 0.002s 15 0 0 0 0 0s 0s 16 0 0 0 13 0.001s 0.002s 17 0 0 0 27 0.001s 0.002s 18 0 0 0 6 0.001s 0.001s 19 0 0 0 0 0s 0s 20 0 0 0 16 0.001s 0.002s 21 0 0 0 16 0.001s 0.002s 22 0 0 1 32 0.001s 0.002s 23 0 0 0 18 0.001s 0.002s Day Hour Count Avg time (sec) Jan 18 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jan 19 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jan 20 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jan 21 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jan 22 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jan 23 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Jan 24 00 0 0s 01 0 0s 02 0 0s 03 0 0s 04 0 0s 05 0 0s 06 0 0s 07 0 0s 08 0 0s 09 0 0s 10 0 0s 11 0 0s 12 0 0s 13 0 0s 14 0 0s 15 0 0s 16 0 0s 17 0 0s 18 0 0s 19 0 0s 20 0 0s 21 0 0s 22 0 0s 23 0 0s Day Hour Mean distance Mean estimate Jan 18 00 1,837.00 kB 1,837.00 kB 01 189,691.33 kB 513,812.67 kB 02 339.50 kB 393,978.00 kB 03 215.50 kB 319,175.00 kB 04 1,587.00 kB 258,834.00 kB 05 424.50 kB 209,703.50 kB 06 102.50 kB 169,910.50 kB 07 511.50 kB 137,689.00 kB 08 1,162.50 kB 111,733.00 kB 09 1,025.50 kB 90,709.50 kB 10 1,177.50 kB 73,687.00 kB 11 88.50 kB 59,757.00 kB 12 233.00 kB 48,448.50 kB 13 288,117.00 kB 547,389.00 kB 14 22,315.50 kB 447,624.00 kB 15 25,579.50 kB 365,417.00 kB 16 54.00 kB 313,699.00 kB 17 486,292.00 kB 486,292.00 kB 18 36.00 kB 520,322.00 kB 19 50.00 kB 468,294.00 kB 20 74.00 kB 400,402.00 kB 21 288.50 kB 324,378.00 kB 22 98.00 kB 262,766.50 kB 23 69.00 kB 212,855.50 kB Jan 19 00 2,616.00 kB 181,752.00 kB 01 19,537.67 kB 153,033.00 kB 02 10,197.00 kB 118,801.50 kB 03 886.00 kB 96,842.50 kB 04 333.50 kB 78,531.50 kB 05 29,457.50 kB 66,592.00 kB 06 480.00 kB 56,641.50 kB 07 6,399.50 kB 46,551.00 kB 08 1,107.50 kB 38,428.00 kB 09 666.00 kB 31,283.00 kB 10 540.00 kB 25,442.50 kB 11 1,003.00 kB 20,777.00 kB 12 253.50 kB 16,920.00 kB 13 78.00 kB 13,719.50 kB 14 61.50 kB 11,125.50 kB 15 46.00 kB 9,020.00 kB 16 60.00 kB 7,700.00 kB 17 61.00 kB 6,591.00 kB 18 16,063.00 kB 18,845.50 kB 19 814.50 kB 27,497.00 kB 20 108.50 kB 22,358.50 kB 21 7,589.00 kB 19,522.00 kB 22 5,379.00 kB 16,389.50 kB 23 931.50 kB 13,878.00 kB Jan 20 00 1,698.50 kB 11,614.50 kB 01 22,412.00 kB 27,225.50 kB 02 1,808.50 kB 38,384.50 kB 03 239.00 kB 31,150.50 kB 04 6,468.00 kB 27,211.00 kB 05 194,500.33 kB 521,397.67 kB 06 1,313.00 kB 400,118.00 kB 07 5,006.50 kB 324,760.50 kB 08 253,115.50 kB 480,800.00 kB 09 3,685.00 kB 389,846.50 kB 10 1,368.50 kB 316,228.50 kB 11 1,384.00 kB 256,406.50 kB 12 757.50 kB 207,943.50 kB 13 78.50 kB 168,452.50 kB 14 7,425.00 kB 137,197.00 kB 15 854.00 kB 111,906.50 kB 16 10,027.50 kB 92,582.50 kB 17 1,506.50 kB 75,159.00 kB 18 7.00 kB 64,225.00 kB 19 40.00 kB 57,806.00 kB 20 94.00 kB 49,436.50 kB 21 503.00 kB 40,104.50 kB 22 165.50 kB 32,549.00 kB 23 360.00 kB 26,435.50 kB Jan 21 00 2,431.50 kB 21,877.50 kB 01 202.00 kB 17,746.00 kB 02 18,657.00 kB 28,223.00 kB 03 1,059.00 kB 23,347.00 kB 04 521,467.00 kB 521,467.00 kB 05 555.00 kB 445,928.00 kB 06 616.50 kB 361,300.00 kB 07 403.50 kB 292,776.00 kB 08 7,398.00 kB 250,374.00 kB 09 29,696.33 kB 211,554.33 kB 10 12,564.00 kB 164,203.50 kB 11 434.00 kB 133,495.50 kB 12 291.50 kB 108,199.00 kB 13 55.00 kB 87,654.00 kB 14 49.00 kB 71,007.50 kB 15 53.50 kB 57,527.00 kB 16 547.50 kB 46,656.00 kB 17 59.50 kB 37,846.50 kB 18 25.00 kB 30,662.50 kB 19 50.00 kB 24,845.00 kB 20 5,166.50 kB 21,087.00 kB 21 119.50 kB 17,119.00 kB 22 110.00 kB 13,888.00 kB 23 289.00 kB 11,287.00 kB Jan 22 00 2,598.00 kB 9,557.00 kB 01 544.50 kB 7,919.50 kB 02 69,039.00 kB 69,039.00 kB 03 50,612.00 kB 66,748.00 kB 04 475.00 kB 56,352.50 kB 05 1,008.50 kB 45,787.50 kB 06 946.50 kB 37,293.00 kB 07 1,206.00 kB 30,424.50 kB 08 10,799.50 kB 25,847.00 kB 09 226.00 kB 21,880.00 kB 10 614.50 kB 17,800.00 kB 11 848.50 kB 14,592.00 kB 12 29,254.00 kB 55,450.00 kB 13 113.00 kB 44,938.00 kB 14 573.50 kB 36,473.50 kB 15 4,569.50 kB 30,407.00 kB 16 453.50 kB 24,758.00 kB 17 148.00 kB 20,073.00 kB 18 48.00 kB 16,278.50 kB 19 56.00 kB 13,887.00 kB 20 3,622.00 kB 12,257.00 kB 21 823.00 kB 10,380.00 kB 22 29,245.50 kB 55,190.00 kB 23 105.50 kB 44,737.50 kB Jan 23 00 1,757.00 kB 36,573.50 kB 01 169.00 kB 29,646.00 kB 02 29,307.00 kB 41,808.50 kB 03 355.50 kB 49,893.00 kB 04 404.50 kB 40,487.50 kB 05 607.50 kB 32,893.50 kB 06 513.00 kB 26,740.00 kB 07 125,132.50 kB 170,952.50 kB 08 318.50 kB 141,852.00 kB 09 138.00 kB 120,982.00 kB 10 279,952.00 kB 530,313.00 kB 11 1,600.50 kB 429,862.00 kB 12 778.50 kB 348,362.00 kB 13 778.50 kB 282,303.00 kB 14 62.50 kB 228,742.00 kB 15 58.50 kB 185,292.50 kB 16 847.50 kB 150,221.00 kB 17 24.00 kB 121,712.00 kB 18 45.00 kB 98,594.50 kB 19 51.50 kB 79,870.50 kB 20 66.50 kB 64,706.00 kB 21 108.50 kB 52,431.00 kB 22 35,104.00 kB 48,221.00 kB 23 200,829.00 kB 519,130.00 kB Jan 24 00 1,748.50 kB 400,054.50 kB 01 3,162.50 kB 324,580.00 kB 02 354.00 kB 263,029.00 kB 03 203.00 kB 213,105.00 kB 04 4,481.00 kB 173,151.00 kB 05 356.00 kB 140,608.50 kB 06 236.00 kB 113,964.00 kB 07 264.00 kB 92,358.50 kB 08 23,099.50 kB 79,184.00 kB 09 498.00 kB 64,215.00 kB 10 290,701.50 kB 552,160.00 kB 11 2,859.50 kB 447,800.00 kB 12 898.00 kB 362,812.50 kB 13 5,673.00 kB 295,031.50 kB 14 66.50 kB 238,987.00 kB 15 0.00 kB 0.00 kB 16 30.50 kB 193,587.00 kB 17 707.00 kB 156,878.00 kB 18 19.00 kB 133,828.00 kB 19 0.00 kB 0.00 kB 20 58.50 kB 114,430.50 kB 21 71.50 kB 92,702.00 kB 22 2,924.50 kB 75,388.50 kB 23 120.50 kB 61,343.00 kB -
Temporary Files
Size of temporary files
Key values
- 0 Temp Files size Peak
- Date
Size of temporary files (5 minutes period)
NO DATASET
Number of temporary files
Key values
- 0 per second Temp Files Peak
- Date
Number of temporary files (5 minutes period)
NO DATASET
Temporary Files Activity
↑ Back to the top of the Temporary Files Activity tableDay Hour Count Total size Average size Jan 18 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jan 19 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jan 20 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jan 21 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jan 22 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jan 23 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 Jan 24 00 0 0 0 01 0 0 0 02 0 0 0 03 0 0 0 04 0 0 0 05 0 0 0 06 0 0 0 07 0 0 0 08 0 0 0 09 0 0 0 10 0 0 0 11 0 0 0 12 0 0 0 13 0 0 0 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 0 0 0 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 -
Vacuums
Vacuums / Analyzes Distribution
Key values
- 20.28 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-01-21 04:00:57 Date
- 0 sec Highest CPU-cost analyze
Table
Database ctdprd51 - Date
Average Autovacuum Duration
Key values
- 20.28 sec Highest CPU-cost vacuum
Table pub2.term_set_enrichment_agent
Database ctdprd51 - 2026-01-21 04:00:57 Date
Analyzes per table
Key values
- pubc.log_query (122) Main table analyzed (database ctdprd51)
- 140 analyzes Total
Vacuums per table
Key values
- pubc.log_query (14) Main table vacuumed on database ctdprd51
- 23 vacuums Total
Index Buffer usage Skipped WAL usage Table Vacuums scans hits misses dirtied pins frozen records full page bytes ctdprd51.pubc.log_query 14 12 3,646 0 539 0 0 1,181 360 2,567,478 ctdprd51.pg_toast.pg_toast_486223 2 0 96 0 0 0 0 2 0 376 ctdprd51.pub2.term_set_enrichment_agent 2 0 372,629 0 146,005 0 0 186,152 10 11,055,916 ctdprd51.pub2.term_set_enrichment 2 0 7,529 0 3,112 0 0 3,686 4 246,880 ctdprd51.pub2.term_comp_agent 1 0 234 0 77 0 0 73 2 19,010 ctdprd51.pg_toast.pg_toast_2619 1 1 3,603 0 1,611 0 9,818 3,647 1,163 636,724 ctdprd51.pg_catalog.pg_statistic 1 1 669 0 146 0 128 416 133 541,393 Total 23 14 388,406 1,551 151,490 0 9,946 195,157 1,672 15,067,777 Tuples removed per table
Key values
- pg_toast.pg_toast_2619 (4515) Main table with removed tuples on database ctdprd51
- 5291 tuples Total removed
Index Tuples Pages Table Vacuums scans removed remain not yet removable removed remain ctdprd51.pg_toast.pg_toast_2619 1 1 4,515 21,633 0 0 12,592 ctdprd51.pg_catalog.pg_statistic 1 1 606 3,452 0 0 410 ctdprd51.pubc.log_query 14 12 170 15,411 6 0 585 ctdprd51.pub2.term_comp_agent 1 0 0 21,242 0 0 184 ctdprd51.pg_toast.pg_toast_486223 2 0 0 0 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 78,514,063 0 0 892,206 ctdprd51.pub2.term_set_enrichment 2 0 0 1,109,978 0 0 18,324 Total 23 14 5,291 79,685,779 6 0 924,301 Pages removed per table
Key values
- unknown (0) Main table with removed pages on database unknown
- 0 pages Total removed
Pages removed per tables
NO DATASET
Table Number of vacuums Index scans Tuples removed Pages removed ctdprd51.pub2.term_comp_agent 1 0 0 0 ctdprd51.pubc.log_query 14 12 170 0 ctdprd51.pg_toast.pg_toast_2619 1 1 4515 0 ctdprd51.pg_toast.pg_toast_486223 2 0 0 0 ctdprd51.pub2.term_set_enrichment_agent 2 0 0 0 ctdprd51.pg_catalog.pg_statistic 1 1 606 0 ctdprd51.pub2.term_set_enrichment 2 0 0 0 Total 23 14 5,291 0 Autovacuum Activity
↑ Back to the top of the Autovacuum Activity tableDay Hour VACUUMs ANALYZEs Jan 18 00 0 0 01 0 1 02 0 3 03 0 2 04 0 1 05 1 3 06 0 0 07 0 1 08 0 1 09 0 1 10 0 1 11 0 0 12 0 1 13 2 2 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 0 21 0 1 22 0 0 23 0 0 Jan 19 00 1 4 01 0 1 02 0 3 03 1 1 04 0 2 05 0 3 06 1 1 07 1 2 08 0 1 09 0 1 10 0 0 11 0 1 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 2 19 0 0 20 0 1 21 0 1 22 0 0 23 1 2 Jan 20 00 1 0 01 0 2 02 0 2 03 0 1 04 0 1 05 1 3 06 0 4 07 1 3 08 0 2 09 0 0 10 0 0 11 0 1 12 0 1 13 0 0 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 0 20 0 0 21 0 1 22 0 1 23 0 0 Jan 21 00 1 2 01 0 1 02 0 2 03 0 1 04 2 1 05 0 2 06 0 1 07 1 0 08 0 1 09 0 1 10 0 0 11 0 1 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 1 21 0 0 22 0 0 23 0 1 Jan 22 00 0 1 01 1 5 02 0 1 03 0 2 04 0 1 05 1 3 06 0 1 07 0 1 08 0 1 09 0 0 10 0 0 11 0 1 12 0 0 13 0 0 14 0 0 15 0 0 16 0 0 17 0 0 18 0 0 19 0 0 20 0 1 21 0 1 22 0 1 23 0 0 Jan 23 00 1 1 01 0 1 02 0 3 03 0 2 04 0 2 05 0 4 06 0 1 07 1 1 08 0 1 09 0 1 10 0 1 11 0 0 12 0 0 13 0 0 14 0 0 15 0 0 16 0 1 17 0 0 18 0 0 19 0 0 20 0 0 21 0 0 22 0 0 23 0 1 Jan 24 00 2 0 01 1 2 02 0 2 03 0 1 04 0 1 05 0 3 06 0 0 07 0 2 08 0 1 09 1 2 10 0 0 11 0 0 12 0 2 13 0 0 14 0 0 15 0 0 16 0 0 17 0 1 18 0 0 19 0 0 20 0 0 21 0 0 22 0 1 23 0 0 - 20.28 sec Highest CPU-cost vacuum
-
Locks
Locks by types
Key values
- unknown Main Lock Type
- 0 locks Total
Most frequent waiting queries (N)
Rank Count Total time Min time Max time Avg duration Query NO DATASET
Queries that waited the most
Rank Wait time Query NO DATASET
-
Queries
Queries by type
Key values
- 198 Total read queries
- 233 Total write queries
Queries by database
Key values
- unknown Main database
- 225 Requests
- 3h15m32s (ctdprd51)
- Main time consuming database
Queries by user
Key values
- unknown Main user
- 577 Requests
User Request type Count Duration postgres Total 92 1h35m44s copy to 92 1h35m44s pubc Total 9 1h23m7s select 9 1h23m7s pubeu Total 314 3h2m39s select 314 3h2m39s qaeu Total 20 1m44s select 20 1m44s unknown Total 577 7h45m4s copy to 516 7h25m15s others 9 1m1s select 52 18m46s Duration by user
Key values
- 7h45m4s (unknown) Main time consuming user
User Request type Count Duration postgres Total 92 1h35m44s copy to 92 1h35m44s pubc Total 9 1h23m7s select 9 1h23m7s pubeu Total 314 3h2m39s select 314 3h2m39s qaeu Total 20 1m44s select 20 1m44s unknown Total 577 7h45m4s copy to 516 7h25m15s others 9 1m1s select 52 18m46s Queries by host
Key values
- unknown Main host
- 1,012 Requests
- 13h48m19s (unknown)
- Main time consuming host
Queries by application
Key values
- unknown Main application
- 390 Requests
- 3h42m41s (unknown)
- Main time consuming application
Number of cancelled queries
Key values
- 0 per second Cancelled query Peak
- 2026-01-24 12:16:49 Date
Number of cancelled queries (5 minutes period)
NO DATASET
-
Top Queries
Histogram of query times
Key values
- 251 > 10000ms duration
Slowest individual queries
Rank Duration Query 1 26m24s COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-01-24 19:30:09 ]
2 26m14s COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;[ Date: 2026-01-24 18:43:39 ]
3 22m32s SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'TNF') INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'BACTERIAL INFECTIONS AND MYCOSES' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;[ Date: 2026-01-20 07:45:54 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
4 12m39s SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'TNF') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'METHYL 2-NONENOATE' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;[ Date: 2026-01-20 11:46:20 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
5 9m17s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-24 00:09:19 - Database: ctdprd51 - User: pubc - Application: psql ]
6 9m15s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-22 00:09:17 - Database: ctdprd51 - User: pubc - Application: psql ]
7 9m14s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-21 00:09:16 - Database: ctdprd51 - User: pubc - Application: psql ]
8 9m14s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-23 00:09:33 - Database: ctdprd51 - User: pubc - Application: psql ]
9 9m11s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-20 00:09:14 - Database: ctdprd51 - User: pubc - Application: psql ]
10 9m10s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-18 00:09:12 - Database: ctdprd51 - User: pubc - Application: psql ]
11 9m10s /* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();[ Date: 2026-01-19 00:09:12 - Database: ctdprd51 - User: pubc - Application: psql ]
12 7m34s COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-01-24 19:43:12 ]
13 7m31s COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;[ Date: 2026-01-24 18:56:36 ]
14 4m57s SELECT /* BatchDiseaseGeneAssnsDAO */ 'liver disease' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2126484) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;[ Date: 2026-01-19 08:41:53 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
15 3m35s SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2122582') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;[ Date: 2026-01-19 23:29:11 - Database: ctdprd51 - User: pubeu - Bind query: yes ]
16 3m23s SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1289862') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;[ Date: 2026-01-20 06:39:29 - Bind query: yes ]
17 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-23 10:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
18 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-22 10:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
19 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-23 18:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
20 1m51s COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;[ Date: 2026-01-21 18:06:53 - Database: ctdprd51 - User: postgres - Application: pg_dump ]
Time consuming queries (N)
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 1h4m35s 7 9m10s 9m17s 9m13s select maint_query_logs_archive ();Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 18 00 1 9m10s 9m10s Jan 19 00 1 9m10s 9m10s Jan 20 00 1 9m11s 9m11s Jan 21 00 1 9m14s 9m14s Jan 22 00 1 9m15s 9m15s Jan 23 00 1 9m14s 9m14s Jan 24 00 1 9m17s 9m17s [ User: pubc - Total duration: 1h4m35s - Times executed: 7 ]
[ Application: psql - Total duration: 1h4m35s - Times executed: 7 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-24 00:09:19 Duration: 9m17s Database: ctdprd51 User: pubc Application: psql
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-22 00:09:17 Duration: 9m15s Database: ctdprd51 User: pubc Application: psql
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-21 00:09:16 Duration: 9m14s Database: ctdprd51 User: pubc Application: psql
2 38m49s 21 1m50s 1m51s 1m50s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 19 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m50s 1m50s Jan 20 06 1 1m51s 1m51s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m50s 1m50s Jan 21 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m51s 1m51s Jan 22 06 1 1m51s 1m51s 10 1 1m51s 1m51s 14 1 1m50s 1m50s 18 1 1m51s 1m51s Jan 23 06 1 1m50s 1m50s 10 1 1m51s 1m51s 14 1 1m51s 1m51s 18 1 1m51s 1m51s Jan 24 19 1 1m51s 1m51s [ User: postgres - Total duration: 36m58s - Times executed: 20 ]
[ Application: pg_dump - Total duration: 36m58s - Times executed: 20 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 18:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
3 32m20s 55 5s176ms 3m35s 35s288ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jan 18 03 1 27s259ms 27s259ms 20 2 1m19s 39s555ms Jan 19 21 5 4m6s 49s264ms 23 18 7m36s 25s377ms Jan 20 00 2 54s956ms 27s478ms 21 4 3m18s 49s599ms 22 4 3m11s 47s904ms Jan 21 00 3 2m19s 46s364ms 01 4 3m20s 50s132ms 03 1 39s709ms 39s709ms Jan 22 00 2 57s85ms 28s542ms 01 2 55s135ms 27s567ms Jan 23 01 1 7s347ms 7s347ms 02 1 7s465ms 7s465ms 03 2 1m34s 47s5ms Jan 24 09 3 1m26s 28s679ms [ User: pubeu - Total duration: 30m20s - Times executed: 52 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2122582') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-19 23:29:11 Duration: 3m35s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121351') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-20 21:31:46 Duration: 53s977ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121351') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-19 21:15:06 Duration: 52s718ms Database: ctdprd51 User: pubeu Bind query: yes
4 26m24s 1 26m24s 26m24s 26m24s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jan 24 19 1 26m24s 26m24s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-24 19:30:09 Duration: 26m24s
5 26m14s 1 26m14s 26m14s 26m14s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jan 24 18 1 26m14s 26m14s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-24 18:43:39 Duration: 26m14s
6 22m32s 1 22m32s 22m32s 22m32s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jan 20 07 1 22m32s 22m32s [ User: pubeu - Total duration: 22m32s - Times executed: 1 ]
-
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'TNF') INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'BACTERIAL INFECTIONS AND MYCOSES' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2026-01-20 07:45:54 Duration: 22m32s Database: ctdprd51 User: pubeu Bind query: yes
7 12m39s 1 12m39s 12m39s 12m39s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jan 20 11 1 12m39s 12m39s [ User: pubeu - Total duration: 12m39s - Times executed: 1 ]
-
SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'TNF') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'METHYL 2-NONENOATE' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-01-20 11:46:20 Duration: 12m39s Database: ctdprd51 User: pubeu Bind query: yes
8 8m21s 21 23s546ms 24s135ms 23s874ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jan 19 06 1 23s692ms 23s692ms 10 1 23s546ms 23s546ms 14 1 23s810ms 23s810ms 18 1 23s856ms 23s856ms Jan 20 06 1 23s818ms 23s818ms 10 1 23s854ms 23s854ms 14 1 23s668ms 23s668ms 18 1 23s751ms 23s751ms Jan 21 06 1 23s754ms 23s754ms 10 1 23s918ms 23s918ms 14 1 23s979ms 23s979ms 18 1 23s828ms 23s828ms Jan 22 06 1 24s107ms 24s107ms 10 1 24s135ms 24s135ms 14 1 23s839ms 23s839ms 18 1 23s886ms 23s886ms Jan 23 06 1 23s815ms 23s815ms 10 1 24s71ms 24s71ms 14 1 24s55ms 24s55ms 18 1 24s67ms 24s67ms Jan 24 19 1 23s897ms 23s897ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 10:07:17 Duration: 24s135ms
-
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 06:07:17 Duration: 24s107ms
-
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 10:07:17 Duration: 24s71ms
9 7m34s 1 7m34s 7m34s 7m34s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jan 24 19 1 7m34s 7m34s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-24 19:43:12 Duration: 7m34s
10 7m31s 1 7m31s 7m31s 7m31s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jan 24 18 1 7m31s 7m31s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-24 18:56:36 Duration: 7m31s
11 6m17s 21 17s820ms 18s136ms 17s957ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jan 19 06 1 17s876ms 17s876ms 10 1 17s944ms 17s944ms 14 1 17s945ms 17s945ms 18 1 17s959ms 17s959ms Jan 20 06 1 17s977ms 17s977ms 10 1 17s833ms 17s833ms 14 1 17s820ms 17s820ms 18 1 18s48ms 18s48ms Jan 21 06 1 17s826ms 17s826ms 10 1 18s126ms 18s126ms 14 1 18s38ms 18s38ms 18 1 18s136ms 18s136ms Jan 22 06 1 17s942ms 17s942ms 10 1 17s931ms 17s931ms 14 1 18s77ms 18s77ms 18 1 18s1ms 18s1ms Jan 23 06 1 17s933ms 17s933ms 10 1 17s951ms 17s951ms 14 1 17s973ms 17s973ms 18 1 17s926ms 17s926ms Jan 24 18 1 17s836ms 17s836ms [ User: postgres - Total duration: 6m17s - Times executed: 21 ]
[ Application: pg_dump - Total duration: 6m17s - Times executed: 21 ]
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:00:19 Duration: 18s136ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 10:00:20 Duration: 18s126ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:00:19 Duration: 18s77ms Database: ctdprd51 User: postgres Application: pg_dump
12 5m24s 21 15s266ms 15s625ms 15s445ms copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jan 19 06 1 15s347ms 15s347ms 10 1 15s266ms 15s266ms 14 1 15s436ms 15s436ms 18 1 15s477ms 15s477ms Jan 20 06 1 15s428ms 15s428ms 10 1 15s493ms 15s493ms 14 1 15s345ms 15s345ms 18 1 15s365ms 15s365ms Jan 21 06 1 15s332ms 15s332ms 10 1 15s453ms 15s453ms 14 1 15s381ms 15s381ms 18 1 15s388ms 15s388ms Jan 22 06 1 15s570ms 15s570ms 10 1 15s625ms 15s625ms 14 1 15s373ms 15s373ms 18 1 15s531ms 15s531ms Jan 23 06 1 15s496ms 15s496ms 10 1 15s481ms 15s481ms 14 1 15s593ms 15s593ms 18 1 15s530ms 15s530ms Jan 24 19 1 15s442ms 15s442ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-22 10:07:33 Duration: 15s625ms
-
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-23 14:07:33 Duration: 15s593ms
-
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-22 06:07:33 Duration: 15s570ms
13 5m8s 2 11s4ms 4m57s 2m34s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jan 19 08 1 4m57s 4m57s Jan 21 09 1 11s4ms 11s4ms [ User: pubeu - Total duration: 5m8s - Times executed: 2 ]
-
SELECT /* BatchDiseaseGeneAssnsDAO */ 'liver disease' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2126484) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-01-19 08:41:53 Duration: 4m57s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchDiseaseGeneAssnsDAO */ 'myocardial infarction' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2122626) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-01-21 09:47:31 Duration: 11s4ms Database: ctdprd51 User: pubeu Bind query: yes
14 5m5s 21 14s376ms 14s726ms 14s538ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jan 19 06 1 14s498ms 14s498ms 10 1 14s483ms 14s483ms 14 1 14s538ms 14s538ms 18 1 14s469ms 14s469ms Jan 20 06 1 14s376ms 14s376ms 10 1 14s553ms 14s553ms 14 1 14s726ms 14s726ms 18 1 14s582ms 14s582ms Jan 21 06 1 14s478ms 14s478ms 10 1 14s540ms 14s540ms 14 1 14s573ms 14s573ms 18 1 14s609ms 14s609ms Jan 22 06 1 14s573ms 14s573ms 10 1 14s509ms 14s509ms 14 1 14s530ms 14s530ms 18 1 14s684ms 14s684ms Jan 23 06 1 14s434ms 14s434ms 10 1 14s555ms 14s555ms 14 1 14s497ms 14s497ms 18 1 14s561ms 14s561ms Jan 24 18 1 14s531ms 14s531ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-20 14:00:50 Duration: 14s726ms
-
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 18:00:49 Duration: 14s684ms
-
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:00:50 Duration: 14s609ms
15 5m3s 21 14s312ms 14s593ms 14s455ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jan 19 06 1 14s377ms 14s377ms 10 1 14s421ms 14s421ms 14 1 14s405ms 14s405ms 18 1 14s312ms 14s312ms Jan 20 06 1 14s355ms 14s355ms 10 1 14s535ms 14s535ms 14 1 14s461ms 14s461ms 18 1 14s506ms 14s506ms Jan 21 06 1 14s450ms 14s450ms 10 1 14s436ms 14s436ms 14 1 14s496ms 14s496ms 18 1 14s552ms 14s552ms Jan 22 06 1 14s413ms 14s413ms 10 1 14s514ms 14s514ms 14 1 14s593ms 14s593ms 18 1 14s583ms 14s583ms Jan 23 06 1 14s322ms 14s322ms 10 1 14s482ms 14s482ms 14 1 14s404ms 14s404ms 18 1 14s453ms 14s453ms Jan 24 18 1 14s479ms 14s479ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:01:04 Duration: 14s593ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 18:01:04 Duration: 14s583ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:01:04 Duration: 14s552ms
16 3m23s 1 3m23s 3m23s 3m23s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jan 20 06 1 3m23s 3m23s -
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1289862') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2026-01-20 06:39:29 Duration: 3m23s Bind query: yes
17 3m9s 34 5s66ms 6s422ms 5s574ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jan 18 20 3 17s557ms 5s852ms Jan 19 03 4 22s805ms 5s701ms 21 3 16s89ms 5s363ms Jan 20 02 2 11s344ms 5s672ms 09 2 10s459ms 5s229ms 10 6 33s467ms 5s577ms 14 1 5s414ms 5s414ms Jan 21 06 1 6s422ms 6s422ms 08 2 10s919ms 5s459ms 15 1 5s437ms 5s437ms Jan 22 00 1 5s459ms 5s459ms 20 1 5s357ms 5s357ms Jan 23 03 1 5s341ms 5s341ms 06 1 5s544ms 5s544ms Jan 24 00 1 5s429ms 5s429ms 03 1 5s638ms 5s638ms 04 1 5s541ms 5s541ms 07 1 5s460ms 5s460ms 21 1 5s857ms 5s857ms [ User: pubeu - Total duration: 2m47s - Times executed: 30 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1344257' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-21 06:15:16 Duration: 6s422ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1305189' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-18 20:41:04 Duration: 6s103ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1431191' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-19 21:04:45 Duration: 5s888ms Database: ctdprd51 User: pubeu Bind query: yes
18 3m 11 7s126ms 27s950ms 16s450ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jan 20 06 2 55s208ms 27s604ms Jan 21 13 1 23s724ms 23s724ms Jan 22 01 4 32s918ms 8s229ms 22 1 11s724ms 11s724ms 23 1 9s513ms 9s513ms Jan 23 08 2 47s866ms 23s933ms [ User: pubeu - Total duration: 3m - Times executed: 11 ]
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-20 06:36:00 Duration: 27s950ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-20 06:35:58 Duration: 27s257ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-23 08:06:03 Duration: 24s257ms Database: ctdprd51 User: pubeu Bind query: yes
19 2m48s 12 5s47ms 36s150ms 14s79ms select ? "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ? || sq.diseaseacc "DiseaseID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" from ( select distinct gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join gene_disease gd on gga.gene_id = gd.gene_id inner join term d on gd.disease_id = d.id inner join term g on gd.gene_id = g.id where gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and gga.is_not = false and gd.curated_reference_qty > ? order by gt.nm_sort, d.nm_sort, g.nm_sort) sq;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jan 23 03 12 2m48s 14s79ms [ User: pubeu - Total duration: 1m31s - Times executed: 7 ]
-
SELECT /* BatchGOGenesDAO */ 'go:0005515' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1294272) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:14:41 Duration: 36s150ms Bind query: yes
-
SELECT /* BatchGOGenesDAO */ 'go:0016020' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262997) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:15:50 Duration: 24s96ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchGOGenesDAO */ 'go:0005737' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1293371) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:16:41 Duration: 20s832ms Database: ctdprd51 User: pubeu Bind query: yes
20 2m32s 21 7s195ms 7s351ms 7s255ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jan 19 06 1 7s265ms 7s265ms 10 1 7s230ms 7s230ms 14 1 7s216ms 7s216ms 18 1 7s236ms 7s236ms Jan 20 06 1 7s195ms 7s195ms 10 1 7s256ms 7s256ms 14 1 7s246ms 7s246ms 18 1 7s289ms 7s289ms Jan 21 06 1 7s210ms 7s210ms 10 1 7s351ms 7s351ms 14 1 7s252ms 7s252ms 18 1 7s251ms 7s251ms Jan 22 06 1 7s256ms 7s256ms 10 1 7s233ms 7s233ms 14 1 7s276ms 7s276ms 18 1 7s261ms 7s261ms Jan 23 06 1 7s250ms 7s250ms 10 1 7s274ms 7s274ms 14 1 7s252ms 7s252ms 18 1 7s305ms 7s305ms Jan 24 18 1 7s241ms 7s241ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 10:00:30 Duration: 7s351ms
-
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-23 18:00:29 Duration: 7s305ms
-
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-20 18:00:29 Duration: 7s289ms
Most frequent queries (N)
Rank Times executed Total duration Min duration Max duration Avg duration Query 1 55 32m20s 5s176ms 3m35s 35s288ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 18 03 1 27s259ms 27s259ms 20 2 1m19s 39s555ms Jan 19 21 5 4m6s 49s264ms 23 18 7m36s 25s377ms Jan 20 00 2 54s956ms 27s478ms 21 4 3m18s 49s599ms 22 4 3m11s 47s904ms Jan 21 00 3 2m19s 46s364ms 01 4 3m20s 50s132ms 03 1 39s709ms 39s709ms Jan 22 00 2 57s85ms 28s542ms 01 2 55s135ms 27s567ms Jan 23 01 1 7s347ms 7s347ms 02 1 7s465ms 7s465ms 03 2 1m34s 47s5ms Jan 24 09 3 1m26s 28s679ms [ User: pubeu - Total duration: 30m20s - Times executed: 52 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2122582') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-19 23:29:11 Duration: 3m35s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121351') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-20 21:31:46 Duration: 53s977ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121351') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-19 21:15:06 Duration: 52s718ms Database: ctdprd51 User: pubeu Bind query: yes
2 34 3m9s 5s66ms 6s422ms 5s574ms select d.abbr dagabbr, d.nm dagnm, gt.level_min_no daglevelmin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pvalcorrected, te.raw_p_val pvalraw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, count(*) over () fullrowcount from term_enrichment te inner join dag_node gt on te.enriched_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where te.term_id = ? and te.enriched_object_type_id = ? order by te.corrected_p_val, d.abbr, gt.nm_sort limit ?;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 18 20 3 17s557ms 5s852ms Jan 19 03 4 22s805ms 5s701ms 21 3 16s89ms 5s363ms Jan 20 02 2 11s344ms 5s672ms 09 2 10s459ms 5s229ms 10 6 33s467ms 5s577ms 14 1 5s414ms 5s414ms Jan 21 06 1 6s422ms 6s422ms 08 2 10s919ms 5s459ms 15 1 5s437ms 5s437ms Jan 22 00 1 5s459ms 5s459ms 20 1 5s357ms 5s357ms Jan 23 03 1 5s341ms 5s341ms 06 1 5s544ms 5s544ms Jan 24 00 1 5s429ms 5s429ms 03 1 5s638ms 5s638ms 04 1 5s541ms 5s541ms 07 1 5s460ms 5s460ms 21 1 5s857ms 5s857ms [ User: pubeu - Total duration: 2m47s - Times executed: 30 ]
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1344257' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-21 06:15:16 Duration: 6s422ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1305189' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-18 20:41:04 Duration: 6s103ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* ChemGODAO */ d.abbr dagAbbr, d.nm dagNm, gt.level_min_no dagLevelMin, gt.nm gonm, gt.nm_html gonmhtml, gt.acc_txt goacc, gt.object_id goid, te.corrected_p_val pValCorrected, te.raw_p_val pValRaw, te.target_match_qty targetmatchqty, te.target_total_qty targettotalqty, te.background_match_qty backgroundmatchqty, te.background_total_qty backgroundtotalqty, COUNT(*) OVER () fullRowCount FROM term_enrichment te INNER JOIN dag_node gt ON te.enriched_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE te.term_id = '1431191' AND te.enriched_object_type_id = 5 ORDER BY te.corrected_p_val, d.abbr, gt.nm_sort LIMIT 50;
Date: 2026-01-19 21:04:45 Duration: 5s888ms Database: ctdprd51 User: pubeu Bind query: yes
3 23 2m 5s120ms 5s571ms 5s237ms select ? "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casrn "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" from ( with sq as ( select distinct c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casrn, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort from term c inner join gene_chem_reference gcr on c.id = gcr.chem_id inner join term g on gcr.gene_id = g.id where (c.id = ?)) select distinct sq.chem_nm, sq.chem_acc_txt, sq.casrn, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm from sq inner join gene_go_annot gga on sq.gene_id = gga.gene_id inner join dag_node gt on gga.go_term_id = gt.object_id inner join dag d on gt.dag_id = d.id where gga.is_not = false and (d.id = ? or d.id = ?) order by sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jan 18 05 2 10s501ms 5s250ms Jan 19 05 2 10s294ms 5s147ms 21 1 5s190ms 5s190ms 23 2 10s849ms 5s424ms Jan 20 05 2 10s481ms 5s240ms 21 1 5s129ms 5s129ms Jan 21 00 1 5s176ms 5s176ms 05 2 10s450ms 5s225ms Jan 22 01 2 10s642ms 5s321ms 05 2 10s501ms 5s250ms Jan 23 05 2 10s453ms 5s226ms 10 1 5s220ms 5s220ms Jan 24 05 2 10s338ms 5s169ms 09 1 5s233ms 5s233ms [ User: pubeu - Total duration: 1m18s - Times executed: 15 ]
[ User: qaeu - Total duration: 41s807ms - Times executed: 8 ]
-
SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1332236)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-01-19 23:15:33 Duration: 5s571ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1332236)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-01-22 01:08:31 Duration: 5s377ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchChemGODAO */ 'ddt' "Input", sqi.chem_nm "ChemicalName", sqi.chem_acc_txt "ChemicalID", sqi.casRN "CasRN", sqi.gene_symbol "GeneSymbol", sqi.gene_acc_txt "GeneID", sqi.ontology_nm "Ontology", sqi.go_term_nm "GoTermName", sqi.go_acc_txt "GoTermID" FROM ( WITH sq AS ( SELECT DISTINCT c.id chem_id, c.nm chem_nm, c.acc_txt chem_acc_txt, c.secondary_nm casRN, c.nm_sort chem_nm_sort, gcr.gene_id, g.nm gene_symbol, g.acc_txt gene_acc_txt, g.nm_sort gene_symbol_sort FROM term c INNER JOIN gene_chem_reference gcr ON c.id = gcr.chem_id INNER JOIN term g ON gcr.gene_id = g.id WHERE (c.id = 1332236)) SELECT DISTINCT sq.chem_nm, sq.chem_acc_txt, sq.casRN, sq.gene_symbol, sq.gene_acc_txt, gt.nm go_term_nm, gt.acc_txt go_acc_txt, sq.chem_nm_sort, sq.gene_symbol_sort, gt.nm_sort, d.nm ontology_nm FROM sq INNER JOIN gene_go_annot gga ON sq.gene_id = gga.gene_id INNER JOIN dag_node gt ON gga.go_term_id = gt.object_id INNER JOIN dag d ON gt.dag_id = d.id WHERE gga.is_not = false AND (d.id = 5 OR d.id = 4) ORDER BY sq.chem_nm_sort, sq.gene_symbol_sort, d.nm, gt.nm_sort) sqi;
Date: 2026-01-18 05:43:39 Duration: 5s368ms Database: ctdprd51 User: qaeu Bind query: yes
4 21 38m49s 1m50s 1m51s 1m50s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jan 19 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m50s 1m50s Jan 20 06 1 1m51s 1m51s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m50s 1m50s Jan 21 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m51s 1m51s Jan 22 06 1 1m51s 1m51s 10 1 1m51s 1m51s 14 1 1m50s 1m50s 18 1 1m51s 1m51s Jan 23 06 1 1m50s 1m50s 10 1 1m51s 1m51s 14 1 1m51s 1m51s 18 1 1m51s 1m51s Jan 24 19 1 1m51s 1m51s [ User: postgres - Total duration: 36m58s - Times executed: 20 ]
[ Application: pg_dump - Total duration: 36m58s - Times executed: 20 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 18:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
5 21 8m21s 23s546ms 24s135ms 23s874ms copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jan 19 06 1 23s692ms 23s692ms 10 1 23s546ms 23s546ms 14 1 23s810ms 23s810ms 18 1 23s856ms 23s856ms Jan 20 06 1 23s818ms 23s818ms 10 1 23s854ms 23s854ms 14 1 23s668ms 23s668ms 18 1 23s751ms 23s751ms Jan 21 06 1 23s754ms 23s754ms 10 1 23s918ms 23s918ms 14 1 23s979ms 23s979ms 18 1 23s828ms 23s828ms Jan 22 06 1 24s107ms 24s107ms 10 1 24s135ms 24s135ms 14 1 23s839ms 23s839ms 18 1 23s886ms 23s886ms Jan 23 06 1 23s815ms 23s815ms 10 1 24s71ms 24s71ms 14 1 24s55ms 24s55ms 18 1 24s67ms 24s67ms Jan 24 19 1 23s897ms 23s897ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 10:07:17 Duration: 24s135ms
-
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 06:07:17 Duration: 24s107ms
-
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 10:07:17 Duration: 24s71ms
6 21 6m17s 17s820ms 18s136ms 17s957ms copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jan 19 06 1 17s876ms 17s876ms 10 1 17s944ms 17s944ms 14 1 17s945ms 17s945ms 18 1 17s959ms 17s959ms Jan 20 06 1 17s977ms 17s977ms 10 1 17s833ms 17s833ms 14 1 17s820ms 17s820ms 18 1 18s48ms 18s48ms Jan 21 06 1 17s826ms 17s826ms 10 1 18s126ms 18s126ms 14 1 18s38ms 18s38ms 18 1 18s136ms 18s136ms Jan 22 06 1 17s942ms 17s942ms 10 1 17s931ms 17s931ms 14 1 18s77ms 18s77ms 18 1 18s1ms 18s1ms Jan 23 06 1 17s933ms 17s933ms 10 1 17s951ms 17s951ms 14 1 17s973ms 17s973ms 18 1 17s926ms 17s926ms Jan 24 18 1 17s836ms 17s836ms [ User: postgres - Total duration: 6m17s - Times executed: 21 ]
[ Application: pg_dump - Total duration: 6m17s - Times executed: 21 ]
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:00:19 Duration: 18s136ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 10:00:20 Duration: 18s126ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:00:19 Duration: 18s77ms Database: ctdprd51 User: postgres Application: pg_dump
7 21 5m24s 15s266ms 15s625ms 15s445ms copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jan 19 06 1 15s347ms 15s347ms 10 1 15s266ms 15s266ms 14 1 15s436ms 15s436ms 18 1 15s477ms 15s477ms Jan 20 06 1 15s428ms 15s428ms 10 1 15s493ms 15s493ms 14 1 15s345ms 15s345ms 18 1 15s365ms 15s365ms Jan 21 06 1 15s332ms 15s332ms 10 1 15s453ms 15s453ms 14 1 15s381ms 15s381ms 18 1 15s388ms 15s388ms Jan 22 06 1 15s570ms 15s570ms 10 1 15s625ms 15s625ms 14 1 15s373ms 15s373ms 18 1 15s531ms 15s531ms Jan 23 06 1 15s496ms 15s496ms 10 1 15s481ms 15s481ms 14 1 15s593ms 15s593ms 18 1 15s530ms 15s530ms Jan 24 19 1 15s442ms 15s442ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-22 10:07:33 Duration: 15s625ms
-
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-23 14:07:33 Duration: 15s593ms
-
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-22 06:07:33 Duration: 15s570ms
8 21 5m5s 14s376ms 14s726ms 14s538ms copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jan 19 06 1 14s498ms 14s498ms 10 1 14s483ms 14s483ms 14 1 14s538ms 14s538ms 18 1 14s469ms 14s469ms Jan 20 06 1 14s376ms 14s376ms 10 1 14s553ms 14s553ms 14 1 14s726ms 14s726ms 18 1 14s582ms 14s582ms Jan 21 06 1 14s478ms 14s478ms 10 1 14s540ms 14s540ms 14 1 14s573ms 14s573ms 18 1 14s609ms 14s609ms Jan 22 06 1 14s573ms 14s573ms 10 1 14s509ms 14s509ms 14 1 14s530ms 14s530ms 18 1 14s684ms 14s684ms Jan 23 06 1 14s434ms 14s434ms 10 1 14s555ms 14s555ms 14 1 14s497ms 14s497ms 18 1 14s561ms 14s561ms Jan 24 18 1 14s531ms 14s531ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-20 14:00:50 Duration: 14s726ms
-
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 18:00:49 Duration: 14s684ms
-
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:00:50 Duration: 14s609ms
9 21 5m3s 14s312ms 14s593ms 14s455ms copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jan 19 06 1 14s377ms 14s377ms 10 1 14s421ms 14s421ms 14 1 14s405ms 14s405ms 18 1 14s312ms 14s312ms Jan 20 06 1 14s355ms 14s355ms 10 1 14s535ms 14s535ms 14 1 14s461ms 14s461ms 18 1 14s506ms 14s506ms Jan 21 06 1 14s450ms 14s450ms 10 1 14s436ms 14s436ms 14 1 14s496ms 14s496ms 18 1 14s552ms 14s552ms Jan 22 06 1 14s413ms 14s413ms 10 1 14s514ms 14s514ms 14 1 14s593ms 14s593ms 18 1 14s583ms 14s583ms Jan 23 06 1 14s322ms 14s322ms 10 1 14s482ms 14s482ms 14 1 14s404ms 14s404ms 18 1 14s453ms 14s453ms Jan 24 18 1 14s479ms 14s479ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:01:04 Duration: 14s593ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 18:01:04 Duration: 14s583ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:01:04 Duration: 14s552ms
10 21 2m32s 7s195ms 7s351ms 7s255ms copy edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jan 19 06 1 7s265ms 7s265ms 10 1 7s230ms 7s230ms 14 1 7s216ms 7s216ms 18 1 7s236ms 7s236ms Jan 20 06 1 7s195ms 7s195ms 10 1 7s256ms 7s256ms 14 1 7s246ms 7s246ms 18 1 7s289ms 7s289ms Jan 21 06 1 7s210ms 7s210ms 10 1 7s351ms 7s351ms 14 1 7s252ms 7s252ms 18 1 7s251ms 7s251ms Jan 22 06 1 7s256ms 7s256ms 10 1 7s233ms 7s233ms 14 1 7s276ms 7s276ms 18 1 7s261ms 7s261ms Jan 23 06 1 7s250ms 7s250ms 10 1 7s274ms 7s274ms 14 1 7s252ms 7s252ms 18 1 7s305ms 7s305ms Jan 24 18 1 7s241ms 7s241ms -
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 10:00:30 Duration: 7s351ms
-
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-23 18:00:29 Duration: 7s305ms
-
COPY edit.ixn (id, ixn_type_id, parent_id, position_seq, root_id, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-20 18:00:29 Duration: 7s289ms
11 21 2m13s 6s303ms 6s501ms 6s371ms copy edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jan 19 06 1 6s308ms 6s308ms 10 1 6s376ms 6s376ms 14 1 6s381ms 6s381ms 18 1 6s317ms 6s317ms Jan 20 06 1 6s311ms 6s311ms 10 1 6s368ms 6s368ms 14 1 6s401ms 6s401ms 18 1 6s330ms 6s330ms Jan 21 06 1 6s329ms 6s329ms 10 1 6s385ms 6s385ms 14 1 6s420ms 6s420ms 18 1 6s343ms 6s343ms Jan 22 06 1 6s345ms 6s345ms 10 1 6s387ms 6s387ms 14 1 6s467ms 6s467ms 18 1 6s405ms 6s405ms Jan 23 06 1 6s303ms 6s303ms 10 1 6s381ms 6s381ms 14 1 6s336ms 6s336ms 18 1 6s501ms 6s501ms Jan 24 18 1 6s406ms 6s406ms -
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-23 18:01:13 Duration: 6s501ms
-
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:01:12 Duration: 6s467ms
-
COPY edit.reference_ixn (id, reference_acc_txt, reference_acc_db_id, ixn_id, taxon_acc_txt, taxon_acc_db_id, evidence_cd, source_cd, field_cd, internal_note, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 14:01:13 Duration: 6s420ms
12 21 2m6s 5s980ms 6s63ms 6s23ms copy edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jan 19 06 1 5s998ms 5s998ms 10 1 5s996ms 5s996ms 14 1 5s994ms 5s994ms 18 1 6s24ms 6s24ms Jan 20 06 1 5s980ms 5s980ms 10 1 6s27ms 6s27ms 14 1 6s48ms 6s48ms 18 1 6s25ms 6s25ms Jan 21 06 1 5s995ms 5s995ms 10 1 6s46ms 6s46ms 14 1 6s50ms 6s50ms 18 1 6s12ms 6s12ms Jan 22 06 1 6s63ms 6s63ms 10 1 6s14ms 6s14ms 14 1 6s31ms 6s31ms 18 1 6s41ms 6s41ms Jan 23 06 1 5s991ms 5s991ms 10 1 6s27ms 6s27ms 14 1 6s22ms 6s22ms 18 1 6s60ms 6s60ms Jan 24 18 1 6s37ms 6s37ms -
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 06:00:35 Duration: 6s63ms
-
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-23 18:00:35 Duration: 6s60ms
-
COPY edit.ixn_action (ixn_id, action_type_id, action_degree_type_id, position_seq, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 14:00:35 Duration: 6s50ms
13 12 2m48s 5s47ms 36s150ms 14s79ms select ? "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ? || sq.diseaseacc "DiseaseID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" from ( select distinct gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join gene_disease gd on gga.gene_id = gd.gene_id inner join term d on gd.disease_id = d.id inner join term g on gd.gene_id = g.id where gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and gga.is_not = false and gd.curated_reference_qty > ? order by gt.nm_sort, d.nm_sort, g.nm_sort) sq;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jan 23 03 12 2m48s 14s79ms [ User: pubeu - Total duration: 1m31s - Times executed: 7 ]
-
SELECT /* BatchGOGenesDAO */ 'go:0005515' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1294272) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:14:41 Duration: 36s150ms Bind query: yes
-
SELECT /* BatchGOGenesDAO */ 'go:0016020' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262997) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:15:50 Duration: 24s96ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchGOGenesDAO */ 'go:0005737' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1293371) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:16:41 Duration: 20s832ms Database: ctdprd51 User: pubeu Bind query: yes
14 11 3m 7s126ms 27s950ms 16s450ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jan 20 06 2 55s208ms 27s604ms Jan 21 13 1 23s724ms 23s724ms Jan 22 01 4 32s918ms 8s229ms 22 1 11s724ms 11s724ms 23 1 9s513ms 9s513ms Jan 23 08 2 47s866ms 23s933ms [ User: pubeu - Total duration: 3m - Times executed: 11 ]
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-20 06:36:00 Duration: 27s950ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-20 06:35:58 Duration: 27s257ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-23 08:06:03 Duration: 24s257ms Database: ctdprd51 User: pubeu Bind query: yes
15 7 1h4m35s 9m10s 9m17s 9m13s select maint_query_logs_archive ();Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jan 18 00 1 9m10s 9m10s Jan 19 00 1 9m10s 9m10s Jan 20 00 1 9m11s 9m11s Jan 21 00 1 9m14s 9m14s Jan 22 00 1 9m15s 9m15s Jan 23 00 1 9m14s 9m14s Jan 24 00 1 9m17s 9m17s [ User: pubc - Total duration: 1h4m35s - Times executed: 7 ]
[ Application: psql - Total duration: 1h4m35s - Times executed: 7 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-24 00:09:19 Duration: 9m17s Database: ctdprd51 User: pubc Application: psql
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-22 00:09:17 Duration: 9m15s Database: ctdprd51 User: pubc Application: psql
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-21 00:09:16 Duration: 9m14s Database: ctdprd51 User: pubc Application: psql
16 7 47s901ms 6s635ms 7s335ms 6s843ms vacuum analyze log_query_archive;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jan 18 00 1 6s788ms 6s788ms Jan 19 00 1 6s662ms 6s662ms Jan 20 00 1 6s863ms 6s863ms Jan 21 00 1 7s335ms 7s335ms Jan 22 00 1 6s704ms 6s704ms Jan 23 00 1 6s635ms 6s635ms Jan 24 00 1 6s913ms 6s913ms -
VACUUM ANALYZE log_query_archive;
Date: 2026-01-21 00:09:23 Duration: 7s335ms
-
VACUUM ANALYZE log_query_archive;
Date: 2026-01-24 00:09:26 Duration: 6s913ms
-
VACUUM ANALYZE log_query_archive;
Date: 2026-01-20 00:09:21 Duration: 6s863ms
17 5 53s618ms 5s863ms 12s386ms 10s723ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jan 18 20 2 24s93ms 12s46ms Jan 21 03 2 23s662ms 11s831ms 05 1 5s863ms 5s863ms [ User: pubeu - Total duration: 29s956ms - Times executed: 3 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2126896') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-01-18 20:34:05 Duration: 12s386ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121825') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-01-21 03:25:10 Duration: 11s863ms Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121825') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-01-21 03:25:06 Duration: 11s798ms Bind query: yes
18 5 44s435ms 6s571ms 10s9ms 8s887ms select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jan 22 01 3 24s486ms 8s162ms 23 2 19s948ms 9s974ms [ User: pubeu - Total duration: 19s948ms - Times executed: 2 ]
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1294272') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-01-22 23:43:15 Duration: 10s9ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1294272') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-01-22 23:44:34 Duration: 9s938ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1294272') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort;
Date: 2026-01-22 01:33:57 Duration: 9s930ms Bind query: yes
19 4 48s486ms 11s984ms 12s195ms 12s121ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where stressorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or exposuremarkerterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by outcomerltnp limit ? offset ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jan 20 10 4 48s486ms 12s121ms [ User: pubeu - Total duration: 48s486ms - Times executed: 4 ]
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by outcomeRltnp LIMIT 50 OFFSET 500;
Date: 2026-01-20 10:51:00 Duration: 12s195ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by outcomeRltnp LIMIT 50 OFFSET 350;
Date: 2026-01-20 10:50:42 Duration: 12s164ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by outcomeRltnp LIMIT 50 OFFSET 650;
Date: 2026-01-20 10:51:18 Duration: 12s142ms Database: ctdprd51 User: pubeu Bind query: yes
20 4 36s956ms 8s333ms 9s931ms 9s239ms select distinct associatedterm.nm || ? || o.cd || ? || associatedterm.nm_html || ? || associatedterm.acc_txt || ? || associatedterm.acc_db_cd as associatedterm, associatedterm.id associatedtermid, ptr.ixn_id ixnid, associatedterm.object_type_id || ? || associatedterm.nm_sort associatedtermnmsort, coalesce(associatedterm.secondary_nm, ?) casrn, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotype, phenotypeterm.id phenotypeid, ( select string_agg(distinct taxonterm.nm || ? || ? || ? || taxonterm.nm_html || ? || taxonterm.acc_txt || ? || taxonterm.acc_db_cd || ? || coalesce(taxonterm.secondary_nm, ?), ?)) as taxonterms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || ia.level_seq || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, count(distinct taxonterm.nm) taxoncount, i.ixn_prose_html ixnprosehtml, i.ixn_prose_txt ixnprose, i.sort_txt ixnsort, ( select string_agg(distinct r.acc_txt, ?)) as references, count(distinct ptr.reference_id) refcount, pt.indirect_term_qty inferredcount, count(*) over () fullrowcount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedterm on ptr.term_id = associatedterm.id inner join term phenotypeterm on ptr.phenotype_id = phenotypeterm.id left outer join term taxonterm on ptr.taxon_id = taxonterm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedterm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyterm on ia.anatomy_id = anatomyterm.id where ptr.term_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id in ( select distinct id from term baseterm where object_type_id = ? and baseterm.id in ( select term_id from term_label tl where upper(tl.nm) = ? and tl.object_type_id = ?))) group by associatedterm, associatedtermnmsort, phenotype, casrn, ixnid, ixnprosehtml, ixnprose, ixnsort, associatedtermid, phenotypeid, inferredcount order by associatedtermnmsort asc, pt.indirect_term_qty desc limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jan 23 03 4 36s956ms 9s239ms [ User: pubeu - Total duration: 28s5ms - Times executed: 3 ]
-
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '2,2'',4,4''-TETRABROMODIPHENYL ETHER' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-01-23 03:26:39 Duration: 9s931ms Database: ctdprd51 User: pubeu Bind query: yes
-
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '2,2'',4,4''-TETRABROMODIPHENYL ETHER' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-01-23 03:26:47 Duration: 9s740ms Database: ctdprd51 User: pubeu Bind query: yes
-
select distinct /* ChemPhenotypesAssnsDAO */ associatedTerm.nm || '^' || o.cd || '^' || associatedTerm.nm_html || '^' || associatedTerm.acc_txt || '^' || associatedTerm.acc_db_cd as associatedTerm, associatedTerm.id associatedTermId, ptr.ixn_id ixnId, associatedTerm.object_type_id || '|' || associatedTerm.nm_sort associatedTermNmSort, COALESCE(associatedTerm.secondary_nm, '') casRN, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotype, phenotypeTerm.id phenotypeId, ( SELECT STRING_AGG(distinct taxonTerm.nm || '^' || 'taxon' || '^' || taxonTerm.nm_html || '^' || taxonTerm.acc_txt || '^' || taxonTerm.acc_db_cd || '^' || COALESCE(taxonTerm.secondary_nm, ''), '|')) as taxonTerms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || ia.level_seq || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, COUNT(DISTINCT taxonTerm.nm) taxonCount, i.ixn_prose_html ixnProseHtml, i.ixn_prose_txt ixnProse, i.sort_txt ixnSort, ( SELECT STRING_AGG(distinct r.acc_txt, '|')) as references, COUNT(DISTINCT ptr.reference_id) refCount, pt.indirect_term_qty inferredCount, COUNT(*) OVER () fullRowCount from phenotype_term_reference ptr inner join phenotype_term pt on ptr.term_id = pt.term_id and ptr.phenotype_id = pt.phenotype_id inner join term associatedTerm on ptr.term_id = associatedTerm.id inner join term phenotypeTerm on ptr.phenotype_id = phenotypeTerm.id left outer join term taxonTerm on ptr.taxon_id = taxonTerm.id inner join reference r on ptr.reference_id = r.id inner join ixn i on ptr.ixn_id = i.id inner join object_type o on associatedTerm.object_type_id = o.id left outer join ixn_anatomy ia on ptr.ixn_id = ia.ixn_id left outer join term anatomyTerm on ia.anatomy_id = anatomyTerm.id where ptr.term_id IN ( select /* DBConstants.getDAGTermSQL */ distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id in ( select distinct id from term baseTerm where object_type_id = 2 and baseTerm.id in ( select term_id from term_label tl WHERE UPPER(tl.nm) = '2,2'',4,4''-TETRABROMODIPHENYL ETHER' AND tl.object_type_id = 2))) group by associatedTerm, associatedTermNmSort, phenotype, casRN, ixnId, ixnProseHtml, ixnProse, ixnSort, associatedTermId, phenotypeId, inferredCount ORDER BY associatedTermNmSort asc, pt.indirect_term_qty desc LIMIT 50;
Date: 2026-01-23 03:26:45 Duration: 8s951ms Bind query: yes
Normalized slowest queries (N)
Rank Min duration Max duration Avg duration Times executed Total duration Query 1 26m24s 26m24s 26m24s 1 26m24s copy pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #1
Day Hour Count Duration Avg duration Jan 24 19 1 26m24s 26m24s -
COPY pub2.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-24 19:30:09 Duration: 26m24s
2 26m14s 26m14s 26m14s 1 26m14s copy pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) to stdout;Times Reported Time consuming queries #2
Day Hour Count Duration Avg duration Jan 24 18 1 26m14s 26m14s -
COPY pub1.gene_disease_reference (id, gene_id, disease_id, reference_id, source_acc_txt, source_acc_db_id, via_chem_id, ixn_id, network_score, source_cd, mod_tm) TO stdout;
Date: 2026-01-24 18:43:39 Duration: 26m14s
3 22m32s 22m32s 22m32s 1 22m32s select g.id geneid, g.acc_txt acc, g.nm nm, g.nm nmhtml, g.secondary_nm secondarynm, g.has_chems haschems, g.has_diseases hasdiseases, g.has_exposures hasexposures, g.has_phenotypes hasphenotypes, count(*) over () fullrowcount from term g where g.id in ( select gcr.gene_id from gene_chem_reference gcr where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select gd.gene_id from term t inner join dag_path dp on t.id = dp.ancestor_object_id inner join gene_disease gd on dp.descendant_object_id = gd.disease_id where upper(t.nm) like ? and t.object_type_id = ? and gd.curated_reference_qty > ?)))) order by g.nm_sort, g.id limit ?;Times Reported Time consuming queries #3
Day Hour Count Duration Avg duration Jan 20 07 1 22m32s 22m32s [ User: pubeu - Total duration: 22m32s - Times executed: 1 ]
-
SELECT /* AdvancedGeneQueryDAO.getData */ g.id geneId, g.acc_txt acc, g.nm nm, g.nm nmHtml, g.secondary_nm secondaryNm, g.has_chems hasChems, g.has_diseases hasDiseases, g.has_exposures hasExposures, g.has_phenotypes hasPhenotypes, COUNT(*) OVER () fullRowCount FROM term g WHERE g.id IN ( SELECT gcr.gene_id FROM gene_chem_reference gcr WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'protein'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'TNF') INTERSECT ( SELECT /* IQH.getMasterDiseaseWhereEquals.Name.Gene */ gd.gene_id FROM term t INNER JOIN dag_path dp ON t.id = dp.ancestor_object_id INNER JOIN gene_disease gd ON dp.descendant_object_id = gd.disease_id WHERE UPPER(t.nm) LIKE 'BACTERIAL INFECTIONS AND MYCOSES' AND t.object_type_id = 3 AND gd.curated_reference_qty > 0)))) ORDER BY g.nm_sort, g.id LIMIT 50;
Date: 2026-01-20 07:45:54 Duration: 22m32s Database: ctdprd51 User: pubeu Bind query: yes
4 12m39s 12m39s 12m39s 1 12m39s select g.nm genesymbol, g.id geneid, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, c.nm chemnm, c.nm_html chemnmhtml, c.acc_txt chemacc, c.secondary_nm casrn, c.id chemid, i.id ixnid, i.ixn_prose_txt ixnprose, i.ixn_prose_html ixnprosehtml, i.actions_txt ixnactions, count(distinct gcr.reference_id) refcount, count(distinct gcr.taxon_id) taxoncount, count(*) over () fullrowcount from gene_chem_reference gcr inner join ixn i on gcr.ixn_id = i.id inner join term g on gcr.gene_id = g.id inner join term c on gcr.chem_id = c.id where exists ( select ? from gene_chem_ref_gene_form gf where gf.gene_chem_reference_id = gcr.id and gf.gene_id = gcr.gene_id and gf.actor_form_type_nm in ( select tc.nm from actor_form_type tp, actor_form_type tc where tc.subset_left_no between tp.subset_left_no and tp.subset_right_no and (tp.nm = ?))) and gcr.gene_id = any (array (( select gi.id gene_id from term gi where gi.object_type_id = ? and upper(gi.nm) like ?) intersect ( select ai.gene_id from dag_path pi inner join gene_go_annot ai on pi.descendant_object_id = ai.go_term_id inner join db_link dbli on dbli.object_id = pi.ancestor_object_id where dbli.acc_txt = ? and dbli.type_cd = ? and dbli.object_type_id = ?))) and gcr.chem_id = any (array ( select dp.descendant_object_id from dag_path dp inner join term t on t.id = dp.ancestor_object_id where upper(t.nm) like ? and t.object_type_id = ?)) and gcr.taxon_id = any (array ( select dp.descendant_object_id from dag_path dp inner join dag_node n on n.id = dp.ancestor_dag_node_id where n.acc_txt = ? and n.dag_id = ?)) group by g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id order by c.nm_sort, g.nm_sort, i.sort_txt limit ?;Times Reported Time consuming queries #4
Day Hour Count Duration Avg duration Jan 20 11 1 12m39s 12m39s [ User: pubeu - Total duration: 12m39s - Times executed: 1 ]
-
SELECT /* AdvancedIxnQueryDAO.getData */ g.nm geneSymbol, g.id geneId, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, c.nm chemNm, c.nm_html chemNmhtml, c.acc_txt chemAcc, c.secondary_nm casRN, c.id chemId, i.id ixnId, i.ixn_prose_txt ixnProse, i.ixn_prose_html ixnProseHtml, i.actions_txt ixnActions, COUNT(DISTINCT gcr.reference_id) refCount, COUNT(DISTINCT gcr.taxon_id) taxonCount, COUNT(*) OVER () fullRowCount FROM gene_chem_reference gcr INNER JOIN ixn i ON gcr.ixn_id = i.id INNER JOIN term g ON gcr.gene_id = g.id INNER JOIN term c ON gcr.chem_id = c.id WHERE /* CIQH.getIxnWhereCore */ EXISTS ( SELECT /* CIQH.getIxnGeneFormTypeWhere */ 1 FROM gene_chem_ref_gene_form gf WHERE gf.gene_chem_reference_id = gcr.id AND gf.gene_id = gcr.gene_id AND gf.actor_form_type_nm IN ( SELECT tc.nm FROM actor_form_type tp, actor_form_type tc WHERE tc.subset_left_no BETWEEN tp.subset_left_no AND tp.subset_right_no AND (tp.nm = 'gene'))) AND gcr.gene_id = ANY (ARRAY (( SELECT /* CIQH.getIxnGeneWhereEquals.Name */ gi.id gene_id FROM term gi WHERE gi.object_type_id = 4 AND UPPER(gi.nm) LIKE 'TNF') INTERSECT ( SELECT /* IQH.getMasterGoWhereEquals.Gene */ ai.gene_id FROM dag_path pi INNER JOIN gene_go_annot ai ON pi.descendant_object_id = ai.go_term_id INNER JOIN db_link dbli ON dbli.object_id = pi.ancestor_object_id WHERE dbli.acc_txt = 'GO:0008150' AND dbli.type_cd = 'A' AND dbli.object_type_id = 5))) AND gcr.chem_id = ANY (ARRAY ( SELECT /* CIQH.getIxnChemWhereEquals.Name */ dp.descendant_object_id FROM dag_path dp INNER JOIN term t ON t.id = dp.ancestor_object_id WHERE UPPER(t.nm) LIKE 'METHYL 2-NONENOATE' AND t.object_type_id = 2)) AND gcr.taxon_id = ANY (ARRAY ( SELECT /* CIQH.getIxnTaxonWhereEquals.Acc */ dp.descendant_object_id FROM dag_path dp INNER JOIN dag_node n ON n.id = dp.ancestor_dag_node_id WHERE n.acc_txt = '9606' AND n.dag_id = 7)) GROUP BY g.nm, g.nm_sort, g.acc_txt, g.acc_db_cd, g.id, c.nm, c.nm_html, c.nm_sort, c.acc_txt, c.secondary_nm, c.id, i.ixn_prose_txt, i.ixn_prose_html, i.sort_txt, i.actions_txt, i.id ORDER BY c.nm_sort, g.nm_sort, i.sort_txt LIMIT 50;
Date: 2026-01-20 11:46:20 Duration: 12m39s Database: ctdprd51 User: pubeu Bind query: yes
5 9m10s 9m17s 9m13s 7 1h4m35s select maint_query_logs_archive ();Times Reported Time consuming queries #5
Day Hour Count Duration Avg duration Jan 18 00 1 9m10s 9m10s Jan 19 00 1 9m10s 9m10s Jan 20 00 1 9m11s 9m11s Jan 21 00 1 9m14s 9m14s Jan 22 00 1 9m15s 9m15s Jan 23 00 1 9m14s 9m14s Jan 24 00 1 9m17s 9m17s [ User: pubc - Total duration: 1h4m35s - Times executed: 7 ]
[ Application: psql - Total duration: 1h4m35s - Times executed: 7 ]
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-24 00:09:19 Duration: 9m17s Database: ctdprd51 User: pubc Application: psql
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-22 00:09:17 Duration: 9m15s Database: ctdprd51 User: pubc Application: psql
-
/* * Run daily to prune LOG_QUERY, archive old queries to LOG_QUERY_ARCHIVE * and vacuum/analyze the tables. * * $Id: archive_query_logs.sql 10832 2012-03-19 15:27:11Z mcr $ */ SELECT maint_query_logs_archive ();
Date: 2026-01-21 00:09:16 Duration: 9m14s Database: ctdprd51 User: pubc Application: psql
6 7m34s 7m34s 7m34s 1 7m34s copy pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #6
Day Hour Count Duration Avg duration Jan 24 19 1 7m34s 7m34s -
COPY pub2.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-24 19:43:12 Duration: 7m34s
7 7m31s 7m31s 7m31s 1 7m31s copy pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) to stdout;Times Reported Time consuming queries #7
Day Hour Count Duration Avg duration Jan 24 18 1 7m31s 7m31s -
COPY pub1.term_enrichment_agent (term_id, enriched_term_id, agent_term_id) TO stdout;
Date: 2026-01-24 18:56:36 Duration: 7m31s
8 3m23s 3m23s 3m23s 1 3m23s select phenotypeterm.nm gonm, phenotypeterm.nm_html gonmhtml, phenotypeterm.acc_txt goacc, phenotypeterm.id goid, diseaseterm.nm diseasenm, diseaseterm.acc_txt diseaseacc, diseaseterm.acc_db_cd diseaseaccdbcd, diseaseterm.id diseaseid, via_gene_qty genenetworkcount, via_chem_qty chemnetworkcount, indirect_reference_qty referencecount, count(*) over () fullrowcount from phenotype_term pt inner join term phenotypeterm on pt.phenotype_id = phenotypeterm.id inner join term diseaseterm on pt.term_id = diseaseterm.id where phenotypeterm.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and diseaseterm.object_type_id = ? order by chemnetworkcount desc, genenetworkcount desc limit ?;Times Reported Time consuming queries #8
Day Hour Count Duration Avg duration Jan 20 06 1 3m23s 3m23s -
SELECT /* GoDiseasesDAO */ phenotypeTerm.nm goNm, phenotypeTerm.nm_html goNmHTML, phenotypeTerm.acc_txt goAcc, phenotypeTerm.id goId, diseaseTerm.nm diseaseNm, diseaseTerm.acc_txt diseaseAcc, diseaseTerm.acc_db_cd diseaseAccDBCd, diseaseTerm.id diseaseId, via_gene_qty geneNetworkCount, via_chem_qty chemNetworkCount, indirect_reference_qty referenceCount, COUNT(*) OVER () fullRowCount FROM phenotype_term pt inner join term phenotypeTerm on pt.phenotype_id = phenotypeTerm.id inner join term diseaseTerm on pt.term_id = diseaseTerm.id WHERE phenotypeTerm.id IN ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = '1289862') and diseaseTerm.object_type_id = 3 ORDER BY chemNetworkCount desc, geneNetworkCount desc LIMIT 50;
Date: 2026-01-20 06:39:29 Duration: 3m23s Bind query: yes
9 11s4ms 4m57s 2m34s 2 5m8s select ? "Input", d.nm "DiseaseName", d.acc_db_cd || ? || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = d.id) "DiseaseCategories", case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", string_agg(gdr.source_acc_txt, ? order by gdr.source_acc_txt) "OmimIDs", string_agg(distinct r.acc_txt, ?) "PubMedIDs" from gene_disease_reference gdr inner join term g on gdr.gene_id = g.id inner join term d on gdr.disease_id = d.id left outer join reference r on gdr.reference_id = r.id left outer join term c on gdr.via_chem_id = c.id where d.id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) group by g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, case when gdr.via_chem_id is null then ( select string_agg(a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gdr.gene_id and a.disease_id = gdr.disease_id) else null end, c.nm, gdr.network_score order by d.nm_sort, g.nm, "DirectEvidence", c.nm;Times Reported Time consuming queries #9
Day Hour Count Duration Avg duration Jan 19 08 1 4m57s 4m57s Jan 21 09 1 11s4ms 11s4ms [ User: pubeu - Total duration: 5m8s - Times executed: 2 ]
-
SELECT /* BatchDiseaseGeneAssnsDAO */ 'liver disease' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2126484) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-01-19 08:41:53 Duration: 4m57s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchDiseaseGeneAssnsDAO */ 'myocardial infarction' "Input", d.nm "DiseaseName", d.acc_db_cd || ':' || d.acc_txt "DiseaseID", g.nm "GeneSymbol", g.acc_txt "GeneID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = d.id) "DiseaseCategories", CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END "DirectEvidence", c.nm "InferenceChemicalName", gdr.network_score "InferenceScore", STRING_AGG(gdr.source_acc_txt, '|' ORDER BY gdr.source_acc_txt) "OmimIDs", STRING_AGG(DISTINCT r.acc_txt, '|') "PubMedIDs" FROM gene_disease_reference gdr INNER JOIN term g ON gdr.gene_id = g.id INNER JOIN term d ON gdr.disease_id = d.id LEFT OUTER JOIN reference r ON gdr.reference_id = r.id LEFT OUTER JOIN term c ON gdr.via_chem_id = c.id WHERE d.id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 2122626) GROUP BY g.nm, g.acc_txt, d.nm, d.id, d.acc_txt, d.acc_db_cd, d.nm_sort, CASE WHEN gdr.via_chem_id IS NULL THEN ( SELECT STRING_AGG(a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gdr.gene_id AND a.disease_id = gdr.disease_id) ELSE NULL END, c.nm, gdr.network_score ORDER BY d.nm_sort, g.nm, "DirectEvidence", c.nm;
Date: 2026-01-21 09:47:31 Duration: 11s4ms Database: ctdprd51 User: pubeu Bind query: yes
10 1m50s 1m51s 1m50s 21 38m49s copy pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #10
Day Hour Count Duration Avg duration Jan 19 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m50s 1m50s Jan 20 06 1 1m51s 1m51s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m50s 1m50s Jan 21 06 1 1m50s 1m50s 10 1 1m50s 1m50s 14 1 1m50s 1m50s 18 1 1m51s 1m51s Jan 22 06 1 1m51s 1m51s 10 1 1m51s 1m51s 14 1 1m50s 1m50s 18 1 1m51s 1m51s Jan 23 06 1 1m50s 1m50s 10 1 1m51s 1m51s 14 1 1m51s 1m51s 18 1 1m51s 1m51s Jan 24 19 1 1m51s 1m51s [ User: postgres - Total duration: 36m58s - Times executed: 20 ]
[ Application: pg_dump - Total duration: 36m58s - Times executed: 20 ]
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 10:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
-
COPY pubc.log_query_archive (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, gene_set_txt, molecule_type_txt, volume_txt, first_page_txt, journal_query_type, journal_txt, is_review, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 18:06:53 Duration: 1m51s Database: ctdprd51 User: postgres Application: pg_dump
11 5s176ms 3m35s 35s288ms 55 32m20s select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort;Times Reported Time consuming queries #11
Day Hour Count Duration Avg duration Jan 18 03 1 27s259ms 27s259ms 20 2 1m19s 39s555ms Jan 19 21 5 4m6s 49s264ms 23 18 7m36s 25s377ms Jan 20 00 2 54s956ms 27s478ms 21 4 3m18s 49s599ms 22 4 3m11s 47s904ms Jan 21 00 3 2m19s 46s364ms 01 4 3m20s 50s132ms 03 1 39s709ms 39s709ms Jan 22 00 2 57s85ms 28s542ms 01 2 55s135ms 27s567ms Jan 23 01 1 7s347ms 7s347ms 02 1 7s465ms 7s465ms 03 2 1m34s 47s5ms Jan 24 09 3 1m26s 28s679ms [ User: pubeu - Total duration: 30m20s - Times executed: 52 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2122582') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-19 23:29:11 Duration: 3m35s Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121351') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-20 21:31:46 Duration: 53s977ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121351') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort;
Date: 2026-01-19 21:15:06 Duration: 52s718ms Database: ctdprd51 User: pubeu Bind query: yes
12 23s546ms 24s135ms 23s874ms 21 8m21s copy pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) to stdout;Times Reported Time consuming queries #12
Day Hour Count Duration Avg duration Jan 19 06 1 23s692ms 23s692ms 10 1 23s546ms 23s546ms 14 1 23s810ms 23s810ms 18 1 23s856ms 23s856ms Jan 20 06 1 23s818ms 23s818ms 10 1 23s854ms 23s854ms 14 1 23s668ms 23s668ms 18 1 23s751ms 23s751ms Jan 21 06 1 23s754ms 23s754ms 10 1 23s918ms 23s918ms 14 1 23s979ms 23s979ms 18 1 23s828ms 23s828ms Jan 22 06 1 24s107ms 24s107ms 10 1 24s135ms 24s135ms 14 1 23s839ms 23s839ms 18 1 23s886ms 23s886ms Jan 23 06 1 23s815ms 23s815ms 10 1 24s71ms 24s71ms 14 1 24s55ms 24s55ms 18 1 24s67ms 24s67ms Jan 24 19 1 23s897ms 23s897ms -
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 10:07:17 Duration: 24s135ms
-
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-22 06:07:17 Duration: 24s107ms
-
COPY pubc.log_query_bots (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status) TO stdout;
Date: 2026-01-23 10:07:17 Duration: 24s71ms
13 17s820ms 18s136ms 17s957ms 21 6m17s copy edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #13
Day Hour Count Duration Avg duration Jan 19 06 1 17s876ms 17s876ms 10 1 17s944ms 17s944ms 14 1 17s945ms 17s945ms 18 1 17s959ms 17s959ms Jan 20 06 1 17s977ms 17s977ms 10 1 17s833ms 17s833ms 14 1 17s820ms 17s820ms 18 1 18s48ms 18s48ms Jan 21 06 1 17s826ms 17s826ms 10 1 18s126ms 18s126ms 14 1 18s38ms 18s38ms 18 1 18s136ms 18s136ms Jan 22 06 1 17s942ms 17s942ms 10 1 17s931ms 17s931ms 14 1 18s77ms 18s77ms 18 1 18s1ms 18s1ms Jan 23 06 1 17s933ms 17s933ms 10 1 17s951ms 17s951ms 14 1 17s973ms 17s973ms 18 1 17s926ms 17s926ms Jan 24 18 1 17s836ms 17s836ms [ User: postgres - Total duration: 6m17s - Times executed: 21 ]
[ Application: pg_dump - Total duration: 6m17s - Times executed: 21 ]
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:00:19 Duration: 18s136ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 10:00:20 Duration: 18s126ms Database: ctdprd51 User: postgres Application: pg_dump
-
COPY edit.db_link (object_id, object_type_id, acc_txt, db_id, type_cd, is_primary, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:00:19 Duration: 18s77ms Database: ctdprd51 User: postgres Application: pg_dump
14 7s126ms 27s950ms 16s450ms 11 3m select sq.*, count(*) over () fullrowcount from ( select distinct gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join term g on gga.gene_id = g.id where gt.id in ( select p.descendant_dag_node_id from dag_path p where p.ancestor_object_id = ?) and gga.is_not = false) sq order by sq.gonmsort, sq.genesymbolsort limit ?;Times Reported Time consuming queries #14
Day Hour Count Duration Avg duration Jan 20 06 2 55s208ms 27s604ms Jan 21 13 1 23s724ms 23s724ms Jan 22 01 4 32s918ms 8s229ms 22 1 11s724ms 11s724ms 23 1 9s513ms 9s513ms Jan 23 08 2 47s866ms 23s933ms [ User: pubeu - Total duration: 3m - Times executed: 11 ]
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-20 06:36:00 Duration: 27s950ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-20 06:35:58 Duration: 27s257ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* GoGenesDAO */ sq.*, COUNT(*) OVER () fullRowCount FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_html gonmhtml, gt.nm_sort gonmsort, gt.acc_txt goacc, gt.object_id goid, g.nm genesymbol, g.nm_sort genesymbolsort, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN term g ON gga.gene_id = g.id WHERE gt.id IN ( SELECT p.descendant_dag_node_id FROM dag_path p WHERE p.ancestor_object_id = '1252533') AND gga.is_not = false) sq ORDER BY sq.gonmsort, sq.genesymbolsort LIMIT 50;
Date: 2026-01-23 08:06:03 Duration: 24s257ms Database: ctdprd51 User: pubeu Bind query: yes
15 15s266ms 15s625ms 15s445ms 21 5m24s copy pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) to stdout;Times Reported Time consuming queries #15
Day Hour Count Duration Avg duration Jan 19 06 1 15s347ms 15s347ms 10 1 15s266ms 15s266ms 14 1 15s436ms 15s436ms 18 1 15s477ms 15s477ms Jan 20 06 1 15s428ms 15s428ms 10 1 15s493ms 15s493ms 14 1 15s345ms 15s345ms 18 1 15s365ms 15s365ms Jan 21 06 1 15s332ms 15s332ms 10 1 15s453ms 15s453ms 14 1 15s381ms 15s381ms 18 1 15s388ms 15s388ms Jan 22 06 1 15s570ms 15s570ms 10 1 15s625ms 15s625ms 14 1 15s373ms 15s373ms 18 1 15s531ms 15s531ms Jan 23 06 1 15s496ms 15s496ms 10 1 15s481ms 15s481ms 14 1 15s593ms 15s593ms 18 1 15s530ms 15s530ms Jan 24 19 1 15s442ms 15s442ms -
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-22 10:07:33 Duration: 15s625ms
-
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-23 14:07:33 Duration: 15s593ms
-
COPY pubc.log_query_bots_original (id, type_cd, query_tm, submission_qty, session_id, remote_addr, http_user_agent, server_nm, node_nm, results_qty, execution_ms, basic_query_type, basic_query_txt, gene_query_type, gene_txt, gene_form_type_txt, taxon_query_type, taxon_txt, chem_query_type, chem_txt, party_query_type, party_nm_txt, acc_txt, go_query_type, go_txt, disease_query_type, disease_txt, action_type_txt, action_degree_type_txt, from_yr, through_yr, title_abstract_txt, has_marray, pathway_query_type, pathway_txt, dag_txt, results_format_txt, batch_input_type_txt, gd_assn_type, p_val, p_val_type, input_term_qty, review_status, user_agent_pattern) TO stdout;
Date: 2026-01-22 06:07:33 Duration: 15s570ms
16 14s376ms 14s726ms 14s538ms 21 5m5s copy edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #16
Day Hour Count Duration Avg duration Jan 19 06 1 14s498ms 14s498ms 10 1 14s483ms 14s483ms 14 1 14s538ms 14s538ms 18 1 14s469ms 14s469ms Jan 20 06 1 14s376ms 14s376ms 10 1 14s553ms 14s553ms 14 1 14s726ms 14s726ms 18 1 14s582ms 14s582ms Jan 21 06 1 14s478ms 14s478ms 10 1 14s540ms 14s540ms 14 1 14s573ms 14s573ms 18 1 14s609ms 14s609ms Jan 22 06 1 14s573ms 14s573ms 10 1 14s509ms 14s509ms 14 1 14s530ms 14s530ms 18 1 14s684ms 14s684ms Jan 23 06 1 14s434ms 14s434ms 10 1 14s555ms 14s555ms 14 1 14s497ms 14s497ms 18 1 14s561ms 14s561ms Jan 24 18 1 14s531ms 14s531ms -
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-20 14:00:50 Duration: 14s726ms
-
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 18:00:49 Duration: 14s684ms
-
COPY edit.ixn_actor (ixn_id, position_seq, object_type_id, acc_txt, acc_db_id, object_nm, actor_form_type_id, qual_actor_form_type_id, seq_acc_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:00:50 Duration: 14s609ms
17 14s312ms 14s593ms 14s455ms 21 5m3s copy edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) to stdout;Times Reported Time consuming queries #17
Day Hour Count Duration Avg duration Jan 19 06 1 14s377ms 14s377ms 10 1 14s421ms 14s421ms 14 1 14s405ms 14s405ms 18 1 14s312ms 14s312ms Jan 20 06 1 14s355ms 14s355ms 10 1 14s535ms 14s535ms 14 1 14s461ms 14s461ms 18 1 14s506ms 14s506ms Jan 21 06 1 14s450ms 14s450ms 10 1 14s436ms 14s436ms 14 1 14s496ms 14s496ms 18 1 14s552ms 14s552ms Jan 22 06 1 14s413ms 14s413ms 10 1 14s514ms 14s514ms 14 1 14s593ms 14s593ms 18 1 14s583ms 14s583ms Jan 23 06 1 14s322ms 14s322ms 10 1 14s482ms 14s482ms 14 1 14s404ms 14s404ms 18 1 14s453ms 14s453ms Jan 24 18 1 14s479ms 14s479ms -
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 14:01:04 Duration: 14s593ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-22 18:01:04 Duration: 14s583ms
-
COPY edit.reference (id, title, journal_nm, issue, pages_txt, page_position_seq, volume, pub_dt_format_mask, pub_start_dt, pub_end_dt, pub_start_season_nm, pub_end_season_nm, is_review, is_author_list_complete, affiliation_txt, abstract_txt, create_by, create_tm, mod_by, mod_tm) TO stdout;
Date: 2026-01-21 18:01:04 Duration: 14s552ms
18 5s47ms 36s150ms 14s79ms 12 2m48s select ? "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ? || sq.diseaseacc "DiseaseID", ( select string_agg(stm.slim_term_nm, ? order by stm.slim_term_nm) from slim_term_mapping stm where stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" from ( select distinct gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort from dag_node gt inner join gene_go_annot gga on gt.object_id = gga.go_term_id inner join gene_disease gd on gga.gene_id = gd.gene_id inner join term d on gd.disease_id = d.id inner join term g on gd.gene_id = g.id where gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp where dp.ancestor_object_id = ?) and gga.is_not = false and gd.curated_reference_qty > ? order by gt.nm_sort, d.nm_sort, g.nm_sort) sq;Times Reported Time consuming queries #18
Day Hour Count Duration Avg duration Jan 23 03 12 2m48s 14s79ms [ User: pubeu - Total duration: 1m31s - Times executed: 7 ]
-
SELECT /* BatchGOGenesDAO */ 'go:0005515' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1294272) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:14:41 Duration: 36s150ms Bind query: yes
-
SELECT /* BatchGOGenesDAO */ 'go:0016020' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1262997) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:15:50 Duration: 24s96ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* BatchGOGenesDAO */ 'go:0005737' "Input", sq.gonm "GoTermName", sq.goacc "GoTermID", sq.diseasenm "DiseaseName", sq.diseaseaccdbcd || ':' || sq.diseaseacc "DiseaseID", ( SELECT STRING_AGG(stm.slim_term_nm, '|' ORDER BY stm.slim_term_nm) FROM slim_term_mapping stm WHERE stm.mapped_term_id = sq.disease_id) "DiseaseCategories", sq.genesymbol "InferenceGeneSymbol" FROM ( SELECT DISTINCT gt.nm gonm, gt.nm_sort, gt.acc_txt goacc, d.id disease_id, d.nm diseasenm, d.nm_sort, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, g.nm genesymbol, g.nm_sort FROM dag_node gt INNER JOIN gene_go_annot gga ON gt.object_id = gga.go_term_id INNER JOIN gene_disease gd ON gga.gene_id = gd.gene_id INNER JOIN term d ON gd.disease_id = d.id INNER JOIN term g ON gd.gene_id = g.id WHERE gt.object_id in ( select distinct dp.descendant_object_id from dag_path dp WHERE dp.ancestor_object_id = 1293371) AND gga.is_not = false AND gd.curated_reference_qty > 0 ORDER BY gt.nm_sort, d.nm_sort, g.nm_sort) sq;
Date: 2026-01-23 03:16:41 Duration: 20s832ms Database: ctdprd51 User: pubeu Bind query: yes
19 11s984ms 12s195ms 12s121ms 4 48s486ms select distinct stressorterm.nm as chemnm, stressorterm.nm_html as chemnmhtml, stressorterm.nm_sort as chemnmsort, stressorterm.acc_txt as chemacc, ( select string_agg(distinct stressorsrctype.nm || ? || stressorsrctype.cd, ?)) as stressorsrctypenm, stressor.src_details as stressorsrcdetails, stressor.sample_qty as stressorsampleqty, stressor.note as stressornote, receptor.qty as nbrreceptors, receptor.description as receptors, receptor.note as receptornotes, receptorterm.nm || ? || ( select cd from object_type where id = receptor.object_type_id) || ? || receptorterm.nm_html || ? || receptorterm.acc_txt || ? || receptorterm.acc_db_cd as receptorterms, ( select string_agg(distinct receptortobaccouse.tobacco_use_nm || ? || receptortobaccouse.pct, ?)) as smokerstatus, receptor.age as agerange, receptor.age_uom_nm as ageuomnm, receptor.age_qualifier_nm as agequalifiernm, receptor.gender_nm as gendernmsearch, receptor.id receptorid, ( select string_agg(pct || ? || gender_nm || ? || gender_nm_html, ?) from exp_receptor_gender where exp_receptor_id = receptor.id) as genderdetails, ( select string_agg(distinct receptorrace.race_nm || ? || receptorrace.pct, ?)) as receptorrace, ( select string_agg(distinct eventassaymethod.nm, ?)) as assaymethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumacctxt, ( select string_agg(distinct eventproject.project_nm, ?)) as associatedstudytitles, event.collection_start_yr || ? || event.collection_end_yr as collectionstartandendyr, event.detection_limit as detectionlimit, event.detection_limit_uom as detectionlimituom, event.detection_freq as detectionfreq, event.note as eventnote, ( select string_agg(distinct eventlocation.geographic_region_nm, ?)) as stateorprovince, ( select string_agg(distinct eventlocation.locality_txt, ?)) as localitytxt, ( select string_agg(distinct country.nm, ?)) as studycountries, exposuremarkerterm.nm || ? || ( select cd from object_type where id = exposuremarkerterm.object_type_id) || ? || exposuremarkerterm.nm_html || ? || exposuremarkerterm.acc_txt || ? || exposuremarkerterm.acc_db_cd as assayedmarkers, event.exp_marker_lvl as assaylevel, assay_uom as measurement, assay_measurement_stat as measurementstat, assay_note as assaynote, eiot.description as outcomerltnp, diseaseterm.nm || ? || ? || ? || diseaseterm.nm_html || ? || diseaseterm.acc_txt || ? || diseaseterm.acc_db_cd as diseasefield, phenotypeterm.nm || ? || ? || ? || phenotypeterm.nm_html || ? || phenotypeterm.acc_txt || ? || phenotypeterm.acc_db_cd as phenotypefield, outcome.phenotype_action_degree_type_nm as phenotypeactiondegreetypenm, e.reference_acc_txt || ? || r.abbr_authors_txt || ? || r.pub_start_yr as ref, r.abbr_authors_txt as abbrauthorstxt, ( select string_agg(distinct expstudyfactor.study_factor_nm, ?)) as studyfactornms, ( select string_agg(distinct anatomyterm.nm_html || ? || anatomyterm.acc_txt || ? || anatomyterm.id || ? || anatomyterm.acc_db_cd || ? || anatomyterm.nm, ?)) as anatomyterms, outcome.note as outcomenote, eventlocation.exp_event_id as eventid, count(*) over () fullrowcount from exposure e inner join exp_stressor stressor on e.exp_stressor_id = stressor.id inner join term stressorterm on stressor.chem_id = stressorterm.id left outer join exp_receptor receptor on e.exp_receptor_id = receptor.id left outer join exp_event event on e.exp_event_id = event.id left outer join term exposuremarkerterm on event.exp_marker_term_id = exposuremarkerterm.id left outer join exp_outcome outcome on e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot on outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseterm on outcome.disease_id = diseaseterm.id left outer join term phenotypeterm on outcome.phenotype_id = phenotypeterm.id left outer join term receptorterm on receptor.term_id = receptorterm.id inner join reference r on e.reference_id = r.id left outer join exp_stressor_stressor_src esss on stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorsrctype on esss.exp_stressor_src_type_id = stressorsrctype.id left outer join exp_receptor_tobacco_use receptortobaccouse on receptor.id = receptortobaccouse.exp_receptor_id left outer join exp_receptor_race receptorrace on receptor.id = receptorrace.exp_receptor_id left outer join exp_event_assay_method eventassaymethod on event.id = eventassaymethod.exp_event_id left outer join exp_event_location eventlocation on event.id = eventlocation.exp_event_id left outer join exp_anatomy expanatomy on outcome.id = expanatomy.exp_outcome_id left outer join term anatomyterm on expanatomy.anatomy_id = anatomyterm.id left outer join country on eventlocation.country_id = country.id left outer join exp_event_project eventproject on event.id = eventproject.exp_event_id left outer join reference_exp referenceexp on e.reference_acc_txt = referenceexp.reference_acc_txt and e.reference_acc_db_id = referenceexp.reference_acc_db_id left outer join exp_study_factor expstudyfactor on referenceexp.id = expstudyfactor.reference_exp_id where stressorterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) or exposuremarkerterm.id in ( select descendant_object_id from dag_path where ancestor_object_id = ?) group by chemnm, chemnmhtml, chemnmsort, chemacc, stressorsrcdetails, stressorsampleqty, stressornote, receptorterms, medium, mediumacctxt, assayedmarkers, assaylevel, measurement, measurementstat, assaynote, outcomerltnp, diseasefield, phenotypefield, phenotypeactiondegreetypenm, ref, r.abbr_authors_txt, collectionstartandendyr, receptorid, detectionlimit, detectionlimituom, detectionfreq, eventnote, outcomenote, eventid order by outcomerltnp limit ? offset ?;Times Reported Time consuming queries #19
Day Hour Count Duration Avg duration Jan 20 10 4 48s486ms 12s121ms [ User: pubeu - Total duration: 48s486ms - Times executed: 4 ]
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by outcomeRltnp LIMIT 50 OFFSET 500;
Date: 2026-01-20 10:51:00 Duration: 12s195ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by outcomeRltnp LIMIT 50 OFFSET 350;
Date: 2026-01-20 10:50:42 Duration: 12s164ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT DISTINCT stressorTerm.nm as chemNm, stressorTerm.nm_html as chemNmHtml, stressorTerm.nm_sort as chemNmSort, stressorTerm.acc_txt as chemAcc, ( SELECT STRING_AGG(distinct stressorSrcType.nm || '^' || stressorSrcType.cd, '|')) as stressorSrcTypeNm, stressor.src_details as stressorSrcDetails, stressor.sample_qty as stressorSampleQty, stressor.note as stressorNote, receptor.qty as nbrReceptors, receptor.description as receptors, receptor.note as receptorNotes, receptorTerm.nm || '^' || ( select cd from object_type where id = receptor.object_type_id) || '^' || receptorTerm.nm_html || '^' || receptorTerm.acc_txt || '^' || receptorTerm.acc_db_cd as receptorTerms, ( SELECT STRING_AGG(distinct receptorTobaccoUse.tobacco_use_nm || '^' || receptorTobaccoUse.pct, ' | ')) as smokerStatus, receptor.age as ageRange, receptor.age_uom_nm as ageUOMNm, receptor.age_qualifier_nm as ageQualifierNm, receptor.gender_nm as genderNmSearch, receptor.id receptorID, ( SELECT STRING_AGG(pct || '^' || gender_nm || '^' || gender_nm_html, '|') from exp_receptor_gender where exp_receptor_id = receptor.id) as genderDetails, ( SELECT STRING_AGG(DISTINCT receptorRace.race_nm || '^' || receptorRace.pct, ' | ')) as receptorRace, ( SELECT STRING_AGG(DISTINCT eventAssayMethod.nm, ' | ')) as assayMethods, event.medium_nm as medium, event.medium_term_acc_txt as mediumAccTxt, ( SELECT STRING_AGG(DISTINCT eventProject.project_nm, ' | ')) as associatedStudyTitles, event.collection_start_yr || '-' || event.collection_end_yr as collectionStartAndEndYr, event.detection_limit as detectionLimit, event.detection_limit_uom as detectionLimitUOM, event.detection_freq as detectionFreq, event.note as eventNote, ( SELECT STRING_AGG(DISTINCT eventLocation.geographic_region_nm, ' | ')) as stateOrProvince, ( SELECT STRING_AGG(DISTINCT eventLocation.locality_txt, ' | ')) as localityTxt, ( SELECT STRING_AGG(distinct country.nm, ' | ')) as studyCountries, exposureMarkerTerm.nm || '^' || ( select cd from object_type where id = exposureMarkerTerm.object_type_id) || '^' || exposureMarkerTerm.nm_html || '^' || exposureMarkerTerm.acc_txt || '^' || exposureMarkerTerm.acc_db_cd as assayedMarkers, event.exp_marker_lvl as assayLevel, assay_uom as measurement, assay_measurement_stat as measurementStat, assay_note as assayNote, eiot.description as outcomeRltnp, diseaseTerm.nm || '^' || 'disease' || '^' || diseaseTerm.nm_html || '^' || diseaseTerm.acc_txt || '^' || diseaseTerm.acc_db_cd as diseaseField, phenotypeTerm.nm || '^' || 'go' || '^' || phenotypeTerm.nm_html || '^' || phenotypeTerm.acc_txt || '^' || phenotypeTerm.acc_db_cd as phenotypeField, outcome.phenotype_action_degree_type_nm as phenotypeActionDegreeTypeNm, e.reference_acc_txt || '^' || r.abbr_authors_txt || '^' || r.pub_start_yr as ref, r.abbr_authors_txt as abbrAuthorsTxt, ( SELECT STRING_AGG(DISTINCT expStudyFactor.study_factor_nm, ' | ')) as studyFactorNms, ( SELECT STRING_AGG(distinct anatomyTerm.nm_html || '^' || anatomyTerm.acc_txt || '^' || anatomyTerm.id || '^' || anatomyTerm.acc_db_cd || '^' || anatomyTerm.nm, '|')) as anatomyTerms, outcome.note as outcomeNote, eventLocation.exp_event_id as eventID, COUNT(*) OVER () fullRowCount FROM exposure e inner join exp_stressor stressor ON e.exp_stressor_id = stressor.id inner join term stressorTerm ON stressor.chem_id = stressorTerm.id left outer join exp_receptor receptor ON e.exp_receptor_id = receptor.id left outer join exp_event event ON e.exp_event_id = event.id left outer join term exposureMarkerTerm ON event.exp_marker_term_id = exposureMarkerTerm.id left outer join exp_outcome outcome ON e.exp_outcome_id = outcome.id left outer join exp_outcome_ixn_type eiot ON outcome.exp_outcome_ixn_type_id = eiot.id left outer join term diseaseTerm ON outcome.disease_id = diseaseTerm.id left outer join term phenotypeTerm ON outcome.phenotype_id = phenotypeTerm.id left outer join term receptorTerm ON receptor.term_id = receptorTerm.id inner join reference r ON e.reference_id = r.id left outer join exp_stressor_stressor_src esss ON stressor.id = esss.exp_stressor_id left outer join exp_stressor_src_type stressorSrcType ON esss.exp_stressor_src_type_id = stressorSrcType.id left outer join exp_receptor_tobacco_use receptorTobaccoUse ON receptor.id = receptorTobaccoUse.exp_receptor_id left outer join exp_receptor_race receptorRace ON receptor.id = receptorRace.exp_receptor_id left outer join exp_event_assay_method eventAssayMethod ON event.id = eventAssayMethod.exp_event_id left outer join exp_event_location eventLocation ON event.id = eventLocation.exp_event_id left outer join exp_anatomy expAnatomy ON outcome.id = expAnatomy.exp_outcome_id Left outer join term anatomyTerm ON expAnatomy.anatomy_id = anatomyTerm.id left outer join country ON eventLocation.country_id = country.id left outer join exp_event_project eventProject ON event.id = eventProject.exp_event_id left outer join reference_exp referenceExp on e.reference_acc_txt = referenceExp.reference_acc_txt and e.reference_acc_db_id = referenceExp.reference_acc_db_id left outer join exp_study_factor expStudyFactor on referenceExp.id = expStudyFactor.reference_exp_id where stressorTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') or exposureMarkerTerm.id in ( select descendant_object_id from dag_path where ancestor_object_id = '1429912') GROUP BY chemNm, chemNmHtml, chemNmSort, chemAcc, stressorSrcDetails, stressorSampleQty, stressorNote, receptorTerms, medium, mediumAccTxt, assayedMarkers, assayLevel, measurement, measurementStat, assayNote, outcomeRltnp, diseaseField, phenotypeField, phenotypeActionDegreeTypeNm, ref, r.abbr_authors_txt, collectionStartAndEndYr, receptorID, detectionLimit, detectionLimitUOM, detectionFreq, eventNote, outcomeNote, eventID order by outcomeRltnp LIMIT 50 OFFSET 650;
Date: 2026-01-20 10:51:18 Duration: 12s142ms Database: ctdprd51 User: pubeu Bind query: yes
20 5s863ms 12s386ms 10s723ms 5 53s618ms select d.nm diseasenm, d.acc_txt diseaseacc, d.acc_db_cd diseaseaccdbcd, d.id diseaseid, g.nm genesymbol, g.acc_txt geneacc, g.acc_db_cd geneaccdbcd, g.id geneid, gd.network_score networkscore, gd.indirect_chem_qty inferredcount, gd.reference_qty referencecount, gd.exposure_reference_qty exposurereferencecount, case when gd.curated_reference_qty > ? then ( select string_agg(a.action_type_cd || ? || a.action_type_nm, ?) from gene_disease_axn a where a.gene_id = gd.gene_id and a.disease_id = gd.disease_id) else null end actiontypes from gene_disease gd inner join term g on gd.gene_id = g.id inner join term d on gd.disease_id = d.id where gd.disease_id in ( select p.descendant_object_id from dag_path p where p.ancestor_object_id = ?) order by actiontypes, gd.network_score desc nulls last, g.nm_sort, d.nm_sort limit ?;Times Reported Time consuming queries #20
Day Hour Count Duration Avg duration Jan 18 20 2 24s93ms 12s46ms Jan 21 03 2 23s662ms 11s831ms 05 1 5s863ms 5s863ms [ User: pubeu - Total duration: 29s956ms - Times executed: 3 ]
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2126896') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-01-18 20:34:05 Duration: 12s386ms Database: ctdprd51 User: pubeu Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121825') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-01-21 03:25:10 Duration: 11s863ms Bind query: yes
-
SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm, d.acc_txt diseaseAcc, d.acc_db_cd diseaseAccDbCd, d.id diseaseId, g.nm geneSymbol, g.acc_txt geneAcc, g.acc_db_cd geneAccDbCd, g.id geneId, gd.network_score networkScore, gd.indirect_chem_qty inferredCount, gd.reference_qty referenceCount, gd.exposure_reference_qty exposureReferenceCount, CASE WHEN gd.curated_reference_qty > 0 THEN ( SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN ( SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = '2121825') ORDER BY actionTypes, gd.network_score DESC NULLS LAST, g.nm_sort, d.nm_sort LIMIT 50;
Date: 2026-01-21 03:25:06 Duration: 11s798ms Bind query: yes
Time consuming prepare
Rank Total duration Times executed Min duration Max duration Avg duration Query NO DATASET
Time consuming bind
Rank Total duration Times executed Min duration Max duration Avg duration Query 1 0ms 2 0ms 0ms 0ms ;Times Reported Time consuming bind #1
Day Hour Count Duration Avg duration Jan 18 11 2 0ms 0ms [ User: pubeu - Total duration: 2m59s - Times executed: 2 ]
-
;
Date: Duration: 0ms Database: postgres User: ctdprd51 Remote: pubeu
-
Events
Log levels
Key values
- 58,022 Event entries
- (EVENTLOG entries are formaly LOG level entries that are not queries)
Events distribution (except queries)
Key values
- 0 PANIC entries
- 24 FATAL entries
- 12 ERROR entries
- 0 WARNING entries
- 31 EVENTLOG entries
Most Frequent Errors/Events
Key values
- 22 Max number of times the same event was reported
- 67 Total events found
Rank Times reported Error 1 22 LOG: could not send data to client: Connection reset by peer
Times Reported Most Frequent Error / Event #1
Day Hour Count Jan 19 23 19 Jan 22 01 1 Jan 24 09 2 - LOG: could not send data to client: Connection reset by peer
- LOG: could not send data to client: Connection reset by peer
- LOG: could not send data to client: Connection reset by peer
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2026-01-19 23:22:19 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount
Date: 2026-01-19 23:31:19 Database: ctdprd51 Application: User: pubeu Remote:
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc
Date: 2026-01-19 23:31:19 Database: ctdprd51 Application: User: pubeu Remote:
2 15 FATAL: connection to client lost
Times Reported Most Frequent Error / Event #2
Day Hour Count Jan 19 23 13 Jan 24 09 2 - FATAL: connection to client lost
- FATAL: connection to client lost
- FATAL: connection to client lost
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = $1) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Date: 2026-01-19 23:22:19
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount
Date: 2026-01-19 23:31:19
Statement: SELECT /* DiseaseGeneAssnsDAO */ d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId
Date: 2026-01-19 23:31:19
3 6 ERROR: invalid byte sequence for encoding
Times Reported Most Frequent Error / Event #3
Day Hour Count Jan 18 15 3 Jan 22 05 1 Jan 23 09 2 - ERROR: invalid byte sequence for encoding "UTF8": 0x00
Context: unnamed portal parameter $1
Statement: SELECT /* ObjectIdDAOImpl.LabelsAndAccs */ t.id ,t.nm ,t.nm_sort nmSort ,t.acc_txt acc ,t.acc_db_cd accDbCd FROM term t ,(SELECT li.term_id FROM term_label li WHERE UPPER(li.nm) = $1 AND li.object_type_id = 2 UNION SELECT l.object_id FROM db_link l WHERE upper( l.acc_txt ) = $2 AND l.object_type_id = 2 AND l.type_cd = 'A') ids WHERE t.id = ids.term_id ORDER BY CASE WHEN UPPER(t.nm) = $3 THEN 1 ELSE 2 END ,t.nm_sortDate: 2026-01-18 15:12:01 Database: ctdprd51 Application: User: pubeu Remote:
4 6 LOG: could not receive data from client: Connection timed out
Times Reported Most Frequent Error / Event #4
Day Hour Count Jan 18 11 4 Jan 23 18 2 5 4 FATAL: connection to client lost d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Times Reported Most Frequent Error / Event #5
Day Hour Count Jan 19 23 3 Jan 22 01 1 - FATAL: connection to client lost d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2026-01-19 23:31:19
6 3 LOG: could not receive data from client: Connection reset by peer
Times Reported Most Frequent Error / Event #6
Day Hour Count Jan 19 23 1 Jan 22 01 2 7 3 ERROR: duplicate key value violates unique constraint "..."
Times Reported Most Frequent Error / Event #7
Day Hour Count Jan 20 14 2 15 1 - ERROR: duplicate key value violates unique constraint "ixn_actor_pk"
- ERROR: duplicate key value violates unique constraint "ixn_action_pk"
Detail: Key (ixn_id, position_seq)=(9312670, 2) already exists.
Context: SQL statement "INSERT INTO edit.ixn_actor (ixn_id ,position_seq ,object_type_id ,acc_txt ,acc_db_id ,object_nm ,actor_form_type_id ,qual_actor_form_type_id ,seq_acc_txt ,create_by ,mod_by ,create_tm ,mod_tm ) VALUES (p_ixn_id ,p_position_seq ,p_object_type_id ,p_acc_txt ,p_acc_db_id ,p_object_nm ,p_actor_form_type_id ,p_qual_actor_form_type_id ,p_seq_acc_txt ,p_create_by ,p_mod_by ,p_create_tm ,p_mod_tm )" PL/pgSQL function ins_ixn_actor(integer,smallint,integer,character varying,integer,character varying,integer,integer,character varying,character varying,character varying,timestamp without time zone,timestamp without time zone) line 9 at SQL statement
Statement: select * from edit.ins_ixn_actor($1, $2, $3, $4, $5, $6, $7, $8, $9, $10, $11, $12, $13) as resultDate: 2026-01-20 14:58:57 Database: ctdprd51 Application: User: editeu Remote:
Detail: Key (ixn_id, action_type_id, action_degree_type_id)=(9312734, 1, 1) already exists.
Context: SQL statement "INSERT INTO edit.ixn_action (ixn_id ,action_type_id ,action_degree_type_id ,position_seq ,create_by ,mod_by ,create_tm ,mod_tm ) VALUES (p_ixn_id ,p_action_type_id ,p_action_degree_type_id ,p_position_seq ,p_create_by ,p_mod_by ,p_create_tm ,p_mod_tm )" PL/pgSQL function ins_ixn_action(integer,integer,integer,smallint,character varying,character varying,timestamp without time zone,timestamp without time zone) line 9 at SQL statement
Statement: select * from edit.ins_ixn_action($1, $2, $3, $4, $5, $6, $7, $8) as resultDate: 2026-01-20 15:29:15 Database: ctdprd51 Application: User: editeu Remote:
8 2 ERROR: syntax error in ts"..."
Times Reported Most Frequent Error / Event #8
Day Hour Count Jan 20 22 2 - ERROR: syntax error in ts"LIVER INJURY"
Statement: SELECT /* MeshBasicQueryDAO */ sq.* ,COUNT(*) OVER() fullRowCount FROM ( SELECT /* label */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.nm matchedNm ,lt.nm_display matchedType ,CASE WHEN lt.nm_display='Name' THEN true ELSE false END isNameMatch ,t.has_genes hasGenes ,t.has_chems hasChems ,t.has_diseases hasDiseases ,t.has_phenotypes hasPhenotypes ,CASE WHEN UPPER(l.nm) = $1 THEN 1 ELSE 2 END relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasExposures FROM term t INNER JOIN term_label l ON l.term_id = t.id INNER JOIN term_label_type lt ON l.term_label_type_id = lt.id WHERE t.object_type_id = 3 AND l.object_type_id = 3 AND l.id IN( SELECT FIRST_VALUE(i.id) OVER(PARTITION BY i.term_id ORDER BY it.priority_seq, i.nm) FROM term_label i INNER JOIN term_label_type it ON i.term_label_type_id = it.id WHERE i.object_type_id = 3 AND i.nm_fts @@ to_tsquery('common.english_nostops', $2) ) UNION ALL SELECT /* term acc */ t.acc_txt acc ,'name:' || t.nm accQueryStr ,t.nm ,t.nm_html nmHtml ,t.secondary_nm casRN ,l.acc_txt matchednm ,'Accession' matchedtype ,false isNameMatch ,t.has_genes hasgenes ,t.has_chems haschems ,t.has_diseases hasdiseases ,t.has_phenotypes hasPhenotypes ,1 relevance ,t.nm_sort ,t.id ,t.acc_db_cd accdbcd ,t.has_exposures hasexposures FROM db_link l INNER JOIN term t ON l.object_id = t.id WHERE l.type_cd = 'A' AND l.object_type_id = 3 AND (upper( l.acc_txt ) = $3 ) ORDER BY 13,14 ) sq LIMIT 50
Date: 2026-01-20 22:42:37 Database: ctdprd51 Application: User: pubeu Remote:
9 2 FATAL: canceling authentication due to timeout
Times Reported Most Frequent Error / Event #9
Day Hour Count Jan 19 21 1 Jan 20 21 1 10 1 FATAL: INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Times Reported Most Frequent Error / Event #10
Day Hour Count Jan 19 23 1 - FATAL: INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2026-01-19 23:31:19
11 1 FATAL: ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL
Times Reported Most Frequent Error / Event #11
Day Hour Count Jan 19 23 1 - FATAL: ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2026-01-19 23:31:19
12 1 ERROR: VACUUM cannot run inside a transaction block
Times Reported Most Frequent Error / Event #12
Day Hour Count Jan 23 10 1 - ERROR: VACUUM cannot run inside a transaction block
Statement: TRUNCATE TABLE ctd_reference; ALTER SEQUENCE ctd_reference_id_seq RESTART; -- articles INSERT INTO ctd_reference (title ,core_citation_txt ,authors_txt ,pub_dt -- Is this reference contained in the REFERENCE table? ,is_in_ctd -- Is this reference the one to be used for citing CTD? ,is_primary_citation ,acc_txt ,acc_db_cd ,type_cd ) VALUES ('Integrating AI-powered text mining from PubTator into the manual curation workflow at the Comparative Toxicogenomics Database.' ,'Database (Oxford). 2025 Feb 21.' ,'Wiegers TC, Davis AP, Wiegers J, Sciaky D, Barkalow F, Wyatt B, Strong M, McMorran R, Abrar S, Mattingly CJ' ,'2025-02-21' ,false ,FALSE ,'39982792' ,'PUBMED' ,'a' ) ,('Comparative Toxicogenomics Database’s 20th anniversary: update 2025.' ,'Nucleic Acids Res. 2024 Oct 10.' ,'Davis AP, Wiegers TC, Sciaky D, Barkalow F, Strong M, Wyatt B, Wiegers J, McMorran R, Abrar S, Mattingly CJ' ,'2024-10-10' ,false ,TRUE ,'39385618' ,'PUBMED' ,'a' ) ,('Transforming environmental health datasets from the comparative toxicogenomics database into chord diagrams to visualize molecular mechanisms.' ,'Front. Toxicol., 21 July 2024.' ,'Wyatt B, Davis AP, Wiegers TC, Wiegers J, Abrar S, Sciaky D, Barkalow F, Strong M, Mattingly CJ' ,'2024-07-21' ,false ,FALSE ,'39104826' ,'PUBMED' ,'a' ) ,('CTD Tetramers: a new online tool that computationally links curated chemicals, genes, phenotypes, and diseases to inform molecular mechanisms for environmental health.' ,'Toxicol Sci. 2023 Jul 24:kfad069.' ,'Davis AP, Wiegers TC, Wiegers J, Wyatt B, Johnson RJ, Sciaky D, Barkalow F, Strong M, Planchart A, Mattingly CJ' ,'2023-07-24' ,false ,FALSE ,'37486259' ,'PUBMED' ,'a' ) ,('Comparative Toxicogenomics Database (CTD): update 2023.' ,'Nucleic Acids Res. 2022 Sep 28.' ,'Davis AP, Wiegers TC, Johnson RJ, Sciaky D, Wiegers J, Mattingly CJ' ,'2022-09-28' ,false ,TRUE ,'36169237' ,'PUBMED' ,'a' ) ,('Predicting molecular mechanisms, pathways, and health outcomes induced by Juul e-cigarette aerosol chemicals using the comparative toxicogenomics database.' ,'Curr Res Toxicol.' ,'Grondin CJ, Davis AP, Wiegers JA, Wiegers TC, Sciaky D, Johnson RJ, Mattingly CJ' ,'2021-08-05' ,false ,FALSE ,'34458863' ,'PUBMED' ,'a' ) ,('Regulatory Status of Pesticide Residues in Cannabis: Implications to Medical Use in Neurological Diseases.' ,'Curr Res Toxicol. Volume 2, 2021, Pages 140-148.' ,'Pinkhasova DV, Jameson LE, Conrow KD, Simeone MP, Davis AP, Wiegers TC, Mattingly CJ, Leung MCK' ,'2021-07-22' ,false ,FALSE ,'34308371' ,'PUBMED' ,'a' ) ,('CTD anatomy: Analyzing chemical-induced phenotypes and exposures from an anatomical perspective, with implications for environmental health studies.' ,'Curr Res Toxicol. Volume 2, 2021, Pages 128-139.' ,'Davis AP, Wiegers TC, Wiegers J, Grondin CJ, Johnson RJ, Sciaky D, Mattingly CJ' ,'2021-03-06' ,false ,FALSE ,'33768211' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database: update 2021.' ,'Nucleic Acids Res. 2020 Oct 17.' ,'Davis AP, Grondin CJ, Johnson RJ, Sciaky D, Wiegers J, Wiegers TC, Mattingly CJ' ,'2020-10-17' ,false ,FALSE ,'33068428' ,'PUBMED' ,'a' ) ,('Leveraging the Comparative Toxicogenomics Database to fill in knowledge gaps for environmental health: a test case for air pollution-induced cardiovascular disease.' ,'Toxicol Sci. 2020 Jul 14.' ,'Davis AP, Wiegers TC, Grondin CJ, Johnson RJ, Sciaky D, Wiegers J, Mattingly CJ' ,'2020-07-14' ,false ,FALSE ,'32663284' ,'PUBMED' ,'a' ) ,('Public data sources to support systems toxicology applications.' ,'Curr Opin Toxicol. 2019 August 16:17-24.' ,'Davis AP, Wiegers J, Wiegers TC, Mattingly CJ' ,'2019-08-16' ,false ,FALSE ,'33604492' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database: update 2019.' ,'Nucleic Acids Res. 2018 Sep 24.' ,'Davis AP, Grondin CJ, Johnson RJ, Sciaky D, McMorran R, Wiegers J, Wiegers TC, Mattingly CJ' ,'2018-09-24' ,false ,FALSE ,'30247620' ,'PUBMED' ,'a' ) ,('Chemical-induced phenotypes at CTD help inform the pre-disease state and construct adverse outcome pathways.' ,'Toxicol Sci. 2018 May 28.' ,'Davis AP, Wiegers TC, Wiegers J, Johnson RJ, Sciaky D, Grondin CJ, Mattingly CJ' ,'2018-05-28' ,false ,false ,'29846728' ,'PUBMED' ,'a' ) ,('Accessing an Expanded Exposure Science Module at the Comparative Toxicogenomics Database.' ,'Environ Health Perspect. 2018 Jan 18;126(1):014501.' ,'Grondin CJ, Davis AP, Wiegers TC, Wiegers JA, Mattingly CJ' ,'2018-01-18' ,false ,false ,'29351546' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database: update 2017.' ,'Nucleic Acids Res. 2016 Sep 19;[Epub ahead of print]' ,'Davis AP, Grondin CJ, Johnson RJ, Sciaky D, King BL, McMorran R, Wiegers J, Wiegers TC, Mattingly CJ.' ,'2016-10-03' ,false ,FALSE ,'27651457' ,'PUBMED' ,'a' ) ,('Advancing Exposure Science through Chemical Data Curation and Integration in the Comparative Toxicogenomics Database.' ,'Environ Health Perspect. 2016 May 12' ,'Grondin CJ, Davis AP, Wiegers TC, King BL, Wiegers JA, Reif DM, Hoppin JA, Mattingly CJ.' ,'2016-05-12' ,false ,false ,'27170236' ,'PUBMED' ,'a' ) ,('Generating Gene Ontology-Disease Inferences to Explore Mechanisms of Human Disease at the Comparative Toxicogenomics Database.' ,'PLoS One. 2016 May 12;11(5):e0155530.' ,'Davis AP, Wiegers TC, King BL, Wiegers J, Grondin CJ, Sciaky D, Johnson RJ, Mattingly CJ.' ,'2016-05-12' ,false ,false ,'27171405' ,'PUBMED' ,'a' ) ,('ToxEvaluator: an integrated computational platform to aid the interpretation of toxicology study-related findings.' ,'Database (Oxford). 2016 May 9;2016. pii: baw062.' ,'Pelletier D, Wiegers TC, Enayetallah A, Kibbey C, Gosink M, Koza-Taylor P, Mattingly CJ, Lawton M.' ,'2016-05-10' ,false ,false ,'27161010' ,'PUBMED' ,'a' ) ,('Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task.' ,'Database (Oxford). 2016 Mar 19;2016. pii: baw032.' ,'Wei CH, Peng Y, Leaman R, Davis AP, Mattingly CJ, Li J, Wiegers TC, Lu Z.' ,'2016-03-19' ,false ,false ,'26994911' ,'PUBMED' ,'a' ) ,('BioCreative V CDR task corpus: a resource for chemical disease relation extraction.' ,'Database (Oxford). 2016 May 9;2016. pii: baw068' ,'Li J, Sun Y, Johnson RJ, Sciaky D, Wei CH, Leaman R, Davis AP, Mattingly CJ, Wiegers TC, Lu Z.' ,'2016-05-09' ,false ,false ,'27161011' ,'PUBMED' ,'a' ) ,('Laying a Community-Based Foundation for Data-Driven Semantic Standards in Environmental Health Sciences.' ,'Environ Health Perspect. 2016 Feb 12.' ,'Mattingly CJ, Boyles R, Lawler CP, Haugen AC, Dearry A, Haendel M.' ,'2016-02-12' ,false ,false ,'26871594' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database''s 10th year anniversary: update 2015.' ,'Nucleic Acids Res. 2015 Jan;43 (Database issue): D914-20.' ,'Davis AP, Grondin CJ, Lennon-Hopkins K, Saraceni-Richards C, Sciaky D, King BL, Wiegers TC, Mattingly CJ.' ,'2015-01-01' ,false ,FALSE ,'25326323 ' ,'PUBMED' ,'a' ) ,('Web services-based text-mining demonstrates broad impacts for interoperability and process simplification.' ,'Database (Oxford). 2014 Jun 10:bau050.' ,'Wiegers TC, Davis AP, Mattingly CJ.' ,'2014-06-10' ,false ,false ,24919658 ,'PUBMED' ,'a' ) ,('BioC interoperability track overview.' ,'Database (Oxford). 2014 Jun 30:bau053.' ,'Comeau DC, Batista-Navarro RT, Dai HJ, Dogan RI, Yepes AJ, Khare R, Lu Z, Marques H, Mattingly CJ, Neves M, Peng Y, Rak R, Rinaldi F, Tsai RT, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ.' ,'2014-06-09' ,false ,false ,24980129 ,'PUBMED' ,'a' ) ,('BioCreative-IV virtual issue.' ,'Database (Oxford). 2014 May 22:bau039.' ,'Arighi CN, Wu CH, Cohen KB, Hirschman L, Krallinger M, Valencia A, Lu Z, Wilbur JW, Wiegers TC' ,'2014-05-22' ,false ,false ,24852177 ,'PUBMED' ,'a' ) ,('A CTD-Pfizer collaboration: manual curation of 88,000 scientific articles text mined for drug-disease and drug-phenotype interactions.' ,'Database (Oxford). 2013 Nov 28:bat080.' ,'Davis AP, Wiegers TC, Roberts PM, King BL, Lay JM, Lennon-Hopkins K, Sciaky D, Johnson R, Keating H, Greene N, Hernandez R, McConnell KJ, Enayetallah AE, Mattingly CJ.' ,'2013-11-28' ,false ,false ,'24288140' ,'PUBMED' ,'a' ) ,('Web services-based text-mining demonstrates broad impacts for interoperability and process simplification.' ,'Proceedings of the Fourth BioCreative Evaluation Workshop 1: 69-84.' ,'Wiegers TC, Davis AP, Mattingly CJ.' ,'2013-10-06' ,false ,false ,NULL ,NULL ,'a' ) ,('BioC: a minimalist approach to interoperability for biomedical text processing.' ,'Database (Oxford). 2013 Sep 18:bat064.' ,'Comeau DC, Islamaj DR, Ciccarese P, Cohen KB, Krallinger M, Leitner F, Lu Z, Peng Y, Rinaldi F, Torii M, Valencia A, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ.' ,'2013-09-18' ,false ,false ,'24048470' ,'PUBMED' ,'a' ) ,('Text mining effectively scores and ranks the literature for improving chemical-gene-disease curation at the Comparative Toxicogenomics Database.' ,'PLoS One. 2013 Apr 17;8(4):e58201.' ,'Davis AP, Wiegers TC, Johnson RJ, Lay JM, Lennon-Hopkins K, Saraceni-Richards C, Sciaky D, Murphy CG, Mattingly CJ.' ,'2013-04-17' ,false ,false ,'23613709' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database: update 2013.' ,'Nucleic Acids Res. 2013 Jan 1;41(D1):D1104-14.' ,'Davis AP, Murphy CG, Johnson R, Lay JM, Lennon-Hopkins K, Saraceni-Richards C, Sciaky D, King BL, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2013-01-01' ,false ,FALSE ,'23093600' ,'PUBMED' ,'a' ) ,('Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database.' ,'Database (Oxford). 2012 Dec 6;2012:bas051.' ,'Davis AP, Johnson RJ, Lennon-Hopkins K, Sciaky D, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2012-12-06' ,false ,false ,'23221299' ,'PUBMED' ,'a' ) ,('Collaborative biocuration--text-mining development task for document prioritization for curation.' ,'Database (Oxford). 2012 Nov 22;2012:bas037.' ,'Wiegers TC, Davis AP, Mattingly CJ.' ,'2012-11-22' ,false ,false ,'23180769' ,'PUBMED' ,'a' ) ,('Ranking Transitive Chemical-Disease Inferences Using Local Network Topology in the Comparative Toxicogenomics Database.' ,'PLoS One. 2012;7(11):e46524.' ,'King BL, Davis AP, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2012-11-07' ,false ,false ,'23144783' ,'PUBMED' ,'a' ) ,('Text mining for the biocuration workflow.' ,'Database (Oxford). 2012 Apr 18;2012:bas020.' ,'Hirschman L, Burns GA, Krallinger M, Arighi C, Cohen KB, Valencia A, Wu CH, Chatr-Aryamontri A, Dowell KG, Huala E, Lourenço A, Nash R, Veuthey AL, Wiegers T, Winter AG.' ,'2012-04-18' ,false ,false ,'22513129' ,'PUBMED' ,'a' ) ,('MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database.' ,'Database (Oxford). 2012 Mar 20;2012:bar065.' ,'Davis AP, Wiegers TC, Rosenstein MC, Mattingly CJ.' ,'2012-03-20' ,false ,false ,'22434833' ,'PUBMED' ,'a' ) ,('Disease model curation improvements at Mouse Genome Informatics.' ,'Database (Oxford). 2012 Mar 20;2012:bar063.' ,'Bello SM, Richardson JE, Davis AP, Wiegers TC, Mattingly CJ, Dolan ME, Smith CL, Blake JA, Eppig JT.' ,'2012-03-20' ,false ,false ,'22434831' ,'PUBMED' ,'a' ) ,('Providing the Missing Link: the Exposure Science Ontology ExO.' ,'Environ Sci Technol. 2012 Mar 20;46(6):3046-53.' ,'Mattingly CJ, McKone TE, Callahan MA, Blake JA, Cohen Hubal EA.' ,'2012-03-20' ,false ,false ,'22324457' ,'PUBMED' ,'a' ) ,('DiseaseComps: a metric that discovers similar diseases based upon common toxicogenomic profiles at CTD.' ,'Bioinformation. 2011 Oct 14;7(4):154-6.' ,'Davis AP, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2011-10-14' ,false ,false ,'22125387' ,'PUBMED' ,'a' ) ,('The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database.' ,'Database (Oxford). 2011 Sep 20;2011:bar034.' ,'Davis AP, Wiegers TC, Rosenstein MC, Murphy CG, Mattingly CJ.' ,'2011-09-20' ,false ,false ,'21933848' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database: update 2011.' ,'Nucleic Acids Res. 2011 Jan;39(Database issue):D1067-72.' ,'Davis AP, King BL, Mockus S, Murphy CG, Saraceni-Richards C, Rosenstein M, Wiegers T, Mattingly CJ.' ,'2011-01-01' ,false ,false ,'20864448' ,'PUBMED' ,'a' ) ,('GeneComps and ChemComps: a new CTD metric to identify genes and chemicals with shared toxicogenomic profiles.' ,'Bioinformation. 2009 Oct 15;4(4):173-4.' ,'Davis AP, Murphy CG, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Hampton TH, Mattingly CJ.' ,'2009-10-15' ,false ,false ,'20198196' ,'PUBMED' ,'a' ) ,('Text mining and manual curation of chemical-gene-disease networks for the Comparative Toxicogenomics Database (CTD).' ,'BMC Bioinformatics. 2009 Oct 8;10(1):326.' ,'Wiegers TC, Davis AP, Cohen KB, Hirschman L, Mattingly CJ. ' ,'2009-10-08' ,false ,false ,'19814812' ,'PUBMED' ,'a' ) ,('Genetic and environmental pathways to complex diseases.' ,'BMC Syst Biol. 2009 May 5;3(1):46.' ,'Gohlke JM, Thomas R, Zhang Y, Rosenstein MC, Davis AP, Murphy C, Becker KG, Mattingly CJ, Portier CJ.' ,'2009-05-05' ,false ,false ,'19416532' ,'PUBMED' ,'a' ) ,('Perturbation of defense pathways by low-dose arsenic exposure in zebrafish embryos.' ,'Environ Health Perspect. 2009 Jun;117(6):981-7.' ,'Mattingly CJ, Hampton T, Brothers K, Griffin NE, Planchart AJ.' ,'2009-06-01' ,true ,false ,'19590694' ,'PUBMED' ,'a' ) ,('Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks.' ,'Nucleic Acids Res. 2009 Jan;37(Database issue):D786-92.' ,'Davis AP, Murphy CG, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Mattingly CJ. ' ,'2009-01-01' ,false ,false ,'18782832' ,'PUBMED' ,'a' ) ,('Chemical databases for environmental health and clinical research.' ,'Toxicol Lett. 2009 Apr 10;186(1):62-5.' ,'Mattingly CJ.' ,'2009-04-10' ,false ,false ,'18996453' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database facilitates identification and understanding of chemical-gene-disease associations: arsenic as a case study.' ,'BMC Med Genomics. 2008 Oct 9;1(1):48.' ,'Davis AP, Murphy CG, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2008-10-09' ,false ,false ,'18845002' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database (CTD): a resource for comparative toxicological studies.' ,'J Exp Zoolog A Comp Exp Biol. 2006 Sep 1;305(9):689-92.' ,'Mattingly CJ, Colby GT, Rosenstein MC, Forrest JN, Boyer JL.' ,'2006-09-01' ,false ,false ,'16902965' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database: a cross-species resource for building chemical-gene interaction networks.' ,'Toxicol Sci. 2006 Aug;92(2):587-95.' ,'Mattingly CJ, Rosenstein MC, Davis AP, Colby GT, Forrest JN, Boyer JL.' ,'2006-08-01' ,false ,false ,'16675512' ,'PUBMED' ,'a' ) ,('Promoting comparative molecular studies in environmental health research: an overview of the comparative toxicogenomics database (CTD).' ,'Pharmacogenomics J. 2004;4(1):5-8.' ,'Mattingly CJ, Colby GT, Rosenstein MC, Forrest JN, Boyer JL.' ,'2004-01-01' ,false ,false ,'14735110' ,'PUBMED' ,'a' ) ,('The Comparative Toxicogenomics Database (CTD).' ,'Environ Health Perspect. 2003 May;111(6):793-5.' ,'Mattingly CJ, Colby GT, Forrest JN, Boyer JL.' ,'2003-05-01' ,false ,false ,'12760826' ,'PUBMED' ,'a' ) ; -- Online publications INSERT INTO ctd_reference (title ,core_citation_txt ,authors_txt ,pub_dt ,type_cd ,url ) VALUES ('Linking chemical data from the Comparative Toxicogenomics Database with adverse outcome pathways from the AOP-Wiki: a mechanistic data-oriented approach to help inform environmental health.' ,'F1000Research 2025, 14:1266 (2025)' ,'Davis AP, Wiegers TC, Sciaky D, Barkalow F, Wyatt B, Wiegers J, McMorran R, Abrar S, Mattingly CJ' ,'2025-11-17' ,'a' ,'' ) ,('Understanding environment-disease connections: An introduction to the Comparative Toxicogenomics Database (CTD).' ,'NCI-Nature Pathway Interaction Database. doi:10.1038/pid.2011.2 (2011).' ,'Mattingly CJ.' ,'2011-06-01' ,'a' ,'https://doi.org/10.12688/f1000research.172567.1' ) ; -- Posters/presentations INSERT INTO ctd_reference (title ,core_citation_txt ,authors_txt ,pub_dt ,type_cd ,url ,abstract_url ) VALUES ('Using the Comparative Toxicogenomics Database (CTD) to explore air pollution-associated adverse pregnancy outcomes by integrating exposure data with toxicological mechanisms.' ,'International Society of Exposure Science. Atlanta, GA. August 17-20, 2025.' ,'Mattingly CJ, Abrar S, Barkalow F, Sciaky D, Wiegers JA, Wyatt B, Wiegers TC, Davis AP.' ,'August 17, 2025' ,'p' ,NULL ,NULL ) ,('Using CTD to provide environmental chemical content and inform adverse outcome pathways from the AOP-Wiki.' ,'2025 EHLC Workshop on AOP Standards. Virtual. June 4-5, 2025.' ,'Davis AP.' ,'June 4, 2025' ,'p' ,NULL ,NULL ) ,('Exploring environmental influences on Alzheimer’s disease using the Comparative Toxicogenomics Database (CTD).' ,'Society of Toxicology 64th Annual Meeting. Orlando, FL, USA. March 16-20, 2025.' ,'Mattingly CJ, Abrar S, Barkalow F, Sciaky D, Strong M, Wiegers JA, Wyatt B, Wiegers TC, Davis AP.' ,'March 16, 2025' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): a resource to distill complex exposure pathways to help inform the environmental health continuum, from populations to molecules.' ,'Society of Toxicology 64th Annual Meeting. Orlando, FL, USA. March 16-20, 2025.' ,'Davis AP, Wyatt B, Wiegers TC, Wiegers J, Sciaky D, Barkalaw F, Strong, M, Abrar S, Mattingly CJ.' ,'March 16, 2025' ,'p' ,NULL ,NULL ) ,('Using the Comparative Toxicogenomics Database to distill exposure information, from molecular mechanisms to populations.' ,'Society of Toxicology 64th Annual Meeting. Orlando, FL, USA. March 16-20, 2025.' ,'Davis AP' ,'March 16, 2025' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): a resource to distill complex exposure pathways to help inform the environmental health continuum, from populations to molecules.' ,'International Society of Exposure Science. Montreal, Quebec, Canada. October 20-24, 2024.' ,'Davis AP, Wyatt B, Wiegers TC, Wiegers J, Sciaky D, Barkalaw F, Strong, M, Abrar S, Mattingly CJ.' ,'October 20, 2024' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): a public resource to understand the health effects of PFAS.' ,'National PFAS Conference. Ann Arbor, MI, USA. June 10-12, 2024.' ,'Mattingly CJ, Sciaky D, Barkalaw F, Wyatt B, Strong, M, McMorran R, Abrar S, Wiegers J, Wiegers TC, Davis AP.' ,'June 10, 2024' ,'p' ,NULL ,NULL ) ,('CTD Tetramers: filling environmental health knowledge gaps with computed molecular mechanisms.' ,'NIH/NLM/NCBI Journal Club. Virtual. May 22, 2024.' ,'Davis AP.' ,'May 22, 2024' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database: A tool to investigate the effects of environmental exposures on the etiology of Alzheimer’s disease.' ,'Sapporo Exposome. Sopporo, Japan. May 24-27, 2024.' ,'Mattingly CJ, Wyatt B, Wiegers TC, Wiegers JA, Sciaky D, Barkalow F, Strong M, Abrat S, Davis AP.' ,'May 24, 2024' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database (CTD).' ,'NINDS, NIEHS, UDN, and External Experts Environmental Trigger Workshop. Virtual. May 6, 2024.' ,'Mattingly CJ.' ,'May 6, 2024' ,'p' ,NULL ,NULL ) ,('CTD’s 20th anniversary: providing curated data for environmental health, from molecules to populations.' ,'DRKB Program Network Meeting. Rockville, MD, USA. February 28-29, 2024.' ,'Mattingly CJ, Wyatt B, Wiegers TC, Wiegers JA, Sciaky D, Barkalow F, Strong M, Abrat S, Davis AP' ,'February 28, 2024' ,'p' ,NULL ,NULL ) ,('CTD’s 20th anniversary: providing curated data for environmental health, from molecules to populations.' ,'Society of Toxicology 63rd Annual Meeting. Salt Lake City, UT, USA. March 10-14, 2024.' ,'Davis AP, Wiegers TC, Wiegers JA, Sciaky D, Barkalow F, Strong M, Wyatt B, Abrat S, Mattingly CJ.' ,'March 10, 2024' ,'p' ,NULL ,NULL ) ,('Surveying environmental influences for Alzheimer disease using the public Comparative Toxicogenomics Database.' ,'Society of Toxicology 63rd Annual Meeting. Salt Lake City, UT, USA. March 10-14, 2024.' ,'Wyatt B, Davis AP, Wiegers TC, Wiegers JA, Sciaky D, Barkalow F, Strong M, Abrat S, Mattingly CJ.' ,'March 10, 2024' ,'p' ,NULL ,NULL ) ,('CTD integrates curated chemical, gene, phenotype, anatomy, disease, and exposure data to fill knowledge gaps for environmental health: PFAS-childhood asthma as a use case.' ,'USA Exposome Symposium: Children’s Health, Environmental Justice, and the Exposome. Nashville, TN, USA. January 22-24, 2024.' ,'Wyatt B, Davis AP, Wiegers TC, Wiegers JA, Sciaky D, Barkalow F, Strong M, Abrat S, Mattingly CJ.' ,'January 22, 2024' ,'p' ,NULL ,NULL ) ,('Using CTD to fill knowledge gaps for environmental neuroscience.' ,'NIH Environmental Neuroscience Working Group. Virtual. August 29 2023.' ,'Davis AP.' ,'August 29 2023' ,'p' ,NULL ,NULL ) ,('Using CTD to fill knowledge gaps for environmental health.' ,'Jonathan Hamm Lab Seizure Project Meeting. Virtual. December 15, 2023.' ,'Davis AP.' ,'December 15, 2023' ,'p' ,NULL ,NULL ) ,('CTD Tetramers: a new online tool to fill knowledge gaps about environmental health.' ,'Society of Toxicology 62nd Annual Meeting. Nashville, TN, USA. March 19-23, 2023.' ,'Mattingly CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Davis AP. ' ,'March 19, 2023' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database: a tool to investigate the effects of environmental exposures on the etiology of Alzheimer’s disease.' ,'Alzheimer’s Association International Conference. Amsterdam, Netherlands. July 16-20, 2023.' ,'Mattingly CJ, Wiegers TC, Wiegers JA, Sciaky D, Johnson RJ, Davis AP. ' ,'July 16, 2023' ,'p' ,NULL ,NULL ) ,('Introduction to CTD: navigating curated data t fill in knowledge gaps for environmental health.' ,'The Jackson Laboratory. Bar Harbor, ME, USA. July 12, 2022' ,'Davis AP.' ,'July 12, 2022' ,'p' ,NULL ,NULL ) ,('CTD: integrating chemical, gene, phenotype, anatomy, disease, and exposure data to fill in knowledge gaps for environmental health' ,'Society of Toxicology 61st Annual Meeting. San Diego, CA, USA. March 28-31, 2022.' ,'Davis AP, Grondin CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Mattingly CJ.' ,'March 28, 2022' ,'p' ,NULL ,NULL ) ,('Analyzing e-cigarette aerosol chemicals using the Comparative Toxicogenomics Database.' ,'Society of Toxicology 61st Annual Meeting. San Diego, CA, USA. March 28-31, 2022.' ,'Davis AP, Grondin CJ, Wiegers JA, Wiegers TC, Sciaky D, Johnson RJ, Mattingly CJ.' ,'March 28, 2022' ,'p' ,NULL ,NULL ) ,('Mechanism of neurological hazards from insecticide exposure in cannabis.' ,'Society of Toxicology 61st Annual Meeting. San Diego, CA, USA. March 28-31, 2022.' ,'Jameson L, Rivera A, Conrow K, Pinkhasova D, Jourachian N, Johnson S, Davis AP, Wiegers T, Sammi S, Mattingly CJ, Afia I, Orser C, Cannon J, Leung M.' ,'March 28, 2022' ,'p' ,NULL ,NULL ) ,('Leveraging CTD data to fill in knowledge gaps for environmental health.' ,'OpenTox Euro. Virtual. September 24, 2021.' ,'Davis AP.' ,'September 24, 2021' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database (CTD): linking chemicals, genes, phenotypes, diseases, and exposures to fill in knowledge gaps for environmental health.' ,'Society of Toxicology 60th Annual Meeting. Virtual. March 12-16, 2021.' ,'Mattingly CJ, Grondin CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Davis AP. ' ,'March 12, 2021' ,'p' ,NULL ,NULL ) ,('Regulatory status of pesticide residues I cannabis: implications to medical use in neurological diseases.' ,'Society of Toxicology 60th Annual Meeting. Virtual. March 12-16, 2021.' ,'Pinkhasova S, Jameson L, Conrow K, Simeone M, Davis AP, Wiegers T, Mattingly CJ, Leung M.' ,'March 12, 2021' ,'p' ,NULL ,NULL ) ,('Analyzing the Effects of Emerging Environmental Exposures on Human Health Using the Comparative Toxicogenomics Database.' ,'International Society of Exposure Science. Virtual. August 30-September 2, 2021.' ,'Grondin C, Davis AP, Johnson R, Sciaky D, Wiegers J, Wiegers T, Mattingly CJ. ' ,'August 30, 2021' ,'p' ,NULL ,NULL ) ,('Introduction to CTD.' ,'Arizona State University. Virtual. March 18, 2021.' ,'Davis AP.' ,'March 18, 2021' ,'p' ,NULL ,NULL ) ,('Leveraging CTD to fill in knowledge gaps for environmental health science.' ,'NTP Data Science Seminar Series. Virtual. June 19, 2021.' ,'Davis AP.' ,'June 19, 2021' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): a comprehensive view of chemical exposures, mechanisms, and biological effects.' ,'Society of Toxicology 59th Annual Meeting. Virtual. March 15-19, 2020.' ,'Mattingly CJ, Grondin CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Davis AP. ' ,'March 15, 2020' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): mechanism meets exposure science illustrated through a bisphenol A-diabetes case study.' ,'Society of Toxicology 58th Annual Meeting. Baltimore, MD, USA. March 11-14, 2019.' ,'Mattingly CJ, Grondin CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Davis AP. ' ,'March 11, 2019' ,'p' ,NULL ,NULL ) ,('Using the Comparative Toxicogenomics Database to further our understanding of environmental exposures on human health.' ,'International Society of Exposure Science. Ottawa, Canada. August 27-29, 2018.' ,'Grondin CJ, Davis AP, Wiegers JA, Wiegers TC, Johnson RJ, Sciaky D, Mattingly CJ. ' ,'August 27, 2018' ,'p' ,NULL ,NULL ) ,('Chemical-induced phenotypes at CTD: informing the pre-disease state and adverse outcome pathways.' ,'Society of Toxicology 57th Annual Meeting. San Antonio, TX, USA. March 11-15, 2018.' ,'Davis AP, Wiegers TC, Johnson RJ, Sciaky D, Grondin CJ, Wiegers JA, Mattingly CJ. ' ,'March 11, 2018' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database (CTD): an integrated resource for chemical, gene, phenotype, and exposure data.' ,'Society of Toxicology 57th Annual Meeting. San Antonio, TX, USA. March 11-15, 2018.' ,'Mattingly CJ, Grondin CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Davis AP.' ,'March 11, 2018' ,'p' ,NULL ,NULL ) ,('Facilitating exposure data analysis in the Comparative Toxicogenomics Database: a case study of heavy metals and metabolic syndrome.' ,'Society of Toxicology 57th Annual Meeting. San Antonio, TX, USA. March 11-15, 2018.' ,'Grondin CJ, Davis AP, Wiegers JA, Wiegers TC, Green A, Planchart A, Mattingly CJ.' ,'March 11, 2018' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database (CTD): integrating chemical, gene, phenotype, disease, and exposure science data.' ,'Society of Toxicology 56th Annual Meeting. Baltimore, MD, USA. March 12-16, 2017.' ,'Mattingly CJ, Grondin CJ, Johnson RJ, Sciaky D, Wiegers JA, Wiegers TC, Davis AP.' ,'March 12, 2017' ,'p' ,NULL ,NULL ) ,('Chemical-phenotype curation at the Comparative Toxicogenomics Database.' ,'10th International Biocuration Conference. Palo Alto, CA, USA. March 26-29, 2017.' ,'Davis AP, Johnson RJ, Sciaky D, Grondin CJ, Wiegers JA, Wiegers TC, Mattingly CJ.' ,'March 26, 2017' ,'p' ,NULL ,NULL ) ,('Exposure science in CTD: linking chemical stressors to outcomes via an Exposure Ontology.' ,'10th International Biocuration Conference. Palo Alto, CA, USA. March 26-29, 2017.' ,'Grondin CJ, Davis AP, Wiegers J, Wiegers, TC, King BL, Mattingly CJ.' ,'March 26, 2017' ,'p' ,NULL ,NULL ) ,('Curation and integration of exposure science at the Comparative Toxicogenomics Database: an introduction for new users.' ,'Emory Exposome Summer Course. Atlanta, GA, USA. June 13-15, 2016.' ,'Davis AP.' ,'June 13, 2016' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): Expanding Exposome and Phenotype Content to Elucidate Chemical-Disease Relationships.' ,'Society of Toxicology Annual Meeting. New Orleans, LA, USA. Mar 13-17, 2016.' ,'Mattingly CJ, Grondin CJ, Johnson R, Sciaky D, King BL, Wiegers JA, Wiegers TC, Davis AP.' ,'2016-03-18' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): Advancing understanding of molecular connections among chemicals, genes and diseases.' ,'American Chemical Society National Meeting. San Diego, CA, USA Mar 13-17, 2016.' ,'Grondin CJ, Davis AP, Wiegers TC, Wiegers JA, Mattingly CJ.' ,'2016-03-17' ,'p' ,NULL ,NULL ) ,('Elucidating Correlations between High-Throughput Chemical Screening and Curated Literature.' ,'Society of Toxicology Annual Meeting. New Orleans, LA, USA. Mar 13-17, 2016.' ,'Collier G, Planchart A, Reif DM, Mattingly CJ.' ,'2016-03-16' ,'p' ,NULL ,NULL ) ,('BioCreative V Track 3: Chemical-Disease Relation AND Disease Named Entity Recognition and Normalization.' ,'BioCreative V Challenge Workshop. cicCartuja, Sevilla, Spain. Sept 9-11, 2015.' ,'Wiegers TC, Lu, Z.' ,'2015-09-10' ,'p' ,NULL ,NULL ) ,( 'Exposure Science Data and the Comparative Toxicogenomics Database.' ,'Society of Toxicology Annual Meeting. San Diego, CA, USA. Mar 22-26, 2015.' ,'Grondin CJ, Davis AP, Wiegers JA, Wiegers TC, Mattingly CJ.' ,'2015-03-22' ,'p' ,NULL ,NULL ) ,( 'The Comparative Toxicogenomics Database: Ten Years in the Making.' ,'Society of Toxicology Annual Meeting. San Diego, CA, USA. Mar 22-26, 2015.' ,'Mattingly CJ, Grondin CJ, Lennon-Hopkins K, Saracini-Richards C, Sciaky D, Wiegers JA, McMorran R, King BL, Wiegers TC, Davis AP.' ,'2015-03-22' ,'p' ,NULL ,NULL ) ,( 'Exposure data and the Comparative Toxicogenomics Database (CTD).' ,'Society of Toxicology Annual Meeting. Phoenix, AZ, USA. Mar 23-27, 2014.' ,'Grondin CJ, Davis AP, Mattingly CJ.' ,'2014-03-25' ,'p' ,NULL ,NULL ) ,( 'The Comparative Toxicogenomics Database.' ,'Society of Toxicology Annual Meeting. Phoenix, AZ, USA. Mar 23-27, 2014.' ,'Davis AP, Mattingly CJ, Murphy CG, Lay JM, Lennon-Hopkins K, Sciaky D, Saracini-Richards C, King BL, Rosenstein MC, Wiegers TC.' ,'2014-03-24' ,'p' ,NULL ,NULL ) ,( 'The Comparative Toxicogenomics Database (CTD): Facilitating Mechanistic Understanding of Chemical Effects. ' ,'Society of Toxicology Annual Meeting. Phoenix, AZ, USA. Mar 23-27, 2014.' ,'Mattingly CJ.' ,'2014-03-23' ,'p' ,NULL ,NULL ) ,( 'The Comparative Toxicogenomics Database (CTD): Leveraging Species Diversity to Understand Mechanisms of Toxicity.' ,'Society of Toxicology Annual Meeting. Phoenix, AZ, USA. Mar 23-27, 2014.' ,'Mattingly CJ.' ,'2014-03-23' ,'p' ,NULL ,NULL ) ,( 'BioCreative IV Track 3 CTD: Interoperability and Web Service-based NER' ,'BioCreative IV Conference. Bethesda, MD, USA. Oct 7-9, 2013.' ,'Wiegers TC' ,'2013-03-08' ,'p' ,NULL ,NULL ) ,( 'BioC for NER Web Services-Based High Level Inter-process Communications' ,'BioCreative IV Conference. Bethesda, MD, USA. Oct 7-9, 2013.' ,'Wiegers TC' ,'2013-03-07' ,'p' ,NULL ,NULL ) ,( 'Exposure Data Curation for Integration into the Comparative Toxicogenomics Database (CTD). ' ,'Society of Toxicology Annual Meeting. San Antonio, TX, USA. Mar 10-14, 2013.' ,'Murphy CG, Mattingly CJ, Davis AP' ,'2013-03-10' ,'p' ,NULL ,NULL ) ,( 'The Comparative Toxicogenomics Database.' ,'Society of Toxicology Annual Meeting. San Antonio, TX, USA. Mar 10-14, 2013.' ,'Mattingly CJ, Murphy CG, Johnson R, Lay JM, Lennon-Hopkins K, Saracini-Richards C, Sciaky D, King BL, Rosenstein MC, Wiegers TC, Davis AP.' ,'2013-03-10' ,'p' ,NULL ,NULL ) ,( 'Using CTD to discover and predict molecular connections between environmental chemicals and human health.' ,'Society of Toxicology Annual Meeting. San Francisco. CA, USA. Mar 11-15, 2012.' ,'Murphy CG, Davis AP, Saracini-Richards CA, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2012-03-11' ,'p' ,NULL ,NULL ) ,( 'Predicting Mechanisms of Chemical Toxicity using the Comparative Toxicogenomics Database (CTD).' ,'Society of Toxicology Annual Meeting. San Francisco. CA, USA. Mar 11-15, 2012.' ,'Mattingly CJ, Davis AP, Murphy CG, Saraceni Richards CA, Mockus S, Rosenstein MC, Wiegers TC, King B.' ,'2012-03-11' ,'p' ,NULL ,NULL ) ,('Collaborative Biocuration--Text Mining Development Task for Document Prioritization for Curation.' ,'BioCreative Workshop 2012. Georgetown University, Washington, DC, USA. Apr 4-5, 2012.' ,'Wiegers TC, Davis AP, Mattingly CJ.' ,'2012-04-04' ,'p' ,NULL ,NULL ) ,('Waiting for a robust Disease Ontology: a merger of OMIM and MeSH as a practical interim solution.' ,'International Conference on Biomedical Ontology, University at Buffalo, NY, USA. Jul 26-30, 2011.' ,'Bello SM, Davis AP, Wiegers TC, Dolan ME, Smith C, Richardson J, Blake J, Eppig JT, Mattingly CJ.' ,'2011-07-26' ,'p' ,NULL ,NULL ) ,('Oracle to PostgreSQL: CTD''s Path to Database Happiness.' ,'Mouse Genome Informatics Group Meeting. The Jackson Laboratory. Bar Harbor, ME, USA. Jun 8, 2011.' ,'Rosenstein MC, Wiegers TC, McMorran RA.' ,'2011-06-08' ,'p' ,NULL ,NULL ) ,('Environmental chemicals and human health: uncovering the connections with CTD.' ,'Society of Toxicology Annual Meeting. Washington, DC, USA. Mar 7-10, 2011.' ,'Davis AP, Murphy CG, Saraceni-Richards CA, Mockus S, Rosenstein MC, Wiegers TC, King B, Mattingly CJ.' ,'2011-03-07' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database.' ,'Society of Toxicology Annual Meeting. Washington, DC, USA. Mar 7-10, 2011.' ,'Davis AP, Murphy CG, Mattingly CJ.' ,'2011-03-07' ,'p' ,NULL ,NULL ) ,('Using CTD to understand BPA.' ,'NIEHS BPA Grantee Research Update and Coordination Meeting. Research Triangle Park, NC, USA. Sep 21-22, 2010.' ,'Davis AP.' ,'2010-09-21' ,'p' ,NULL ,NULL ) ,('New features at CTD.' ,'The OpenHelix Blog. May 18, 2010.' ,'Davis AP.' ,'2010-05-18' ,'p' ,'http://blog.openhelix.eu/?p=4406' ,NULL ) ,('Use and development of ontologies in the Comparative Toxicogenomics Database (CTD).' ,'Protein Ontology 3rd Annual Meeting. University of Delaware, Newark, DE, USA. Apr 26-27, 2010.' ,'Murphy CG.' ,'2010-04-26' ,'p' ,NULL ,NULL ) ,('CTD: exploring over 1,000,000 chemical-gene-disease interactions.' ,'Society of Toxicology Annual Meeting. Salt Lake City, UT, USA. Mar 7-11, 2010.' ,'Davis AP, Murphy CG, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Mattingly CJ.' ,'2010-03-07' ,'p' ,NULL ,NULL ) ,('Mapping OMIM to MeSH: a disease hierarchy for CTD.' ,'Mouse Genome Informatics Group Meeting. The Jackson Laboratory. Bar Harbor, ME, USA. Feb 23, 2010.' ,'Davis AP.' ,'2010-02-23' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD) Text Mining Study.' ,'3rd International Biocuration Conference. Berlin, Germany. Apr 2009.' ,'Wiegers TC, Murphy C, Saraceni-Richards CA, Rosenstein MC, Davis AP, Mattingly CJ.' ,'2009-04-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): A discovery tool for identifying chemical-gene-disease networks.' ,'Society of Toxicology Annual Meeting. Baltimore, MD, USA. Mar 2009.' ,'Mattingly CJ, Murphy C, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Davis AP.' ,'2009-03-01' ,'p' ,NULL ,NULL ) ,('Using the Comparative Toxicogenomics Database (CTD) to identify chemical-gene-disease associations.' ,'Society of Experimental Toxicology and Chemistry. Tampa, FL, USA. Nov 2008.' ,'Mattingly CJ, Murphy C, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Davis AP.' ,'2008-11-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database.' ,'Annual environmental health sciences core centers meeting. Philadelphia, PA, USA. Oct 2008.' ,'Mattingly CJ.' ,'2008-10-01' ,'p' ,NULL ,NULL ) ,('Using CTD to discover chemical-gene-disease associations: arsenic as a case study.' ,'Mechanisms of Toxicity, Gordon Research Conference, Bates College, Lewiston, ME, USA. Jul 27-Aug 1, 2008.' ,'Davis AP, Murphy CG, Rosenstein MC, Wiegers TC, Boyer JL, Mattingly CJ.' ,'2008-07-27' ,'p' ,NULL ,NULL ) ,('Using the Comparative Toxicogenomics Database (CTD) to Explore Chemical-Gene-Disease Connections.' ,'University of Maine Graduate School of Biomedical Sciences Symposium. Orono, ME, USA. May 2008.' ,'Mattingly CJ.' ,'2008-05-01' ,'p' ,NULL ,NULL ) ,('Using the Comparative Toxicogenomics Database to identify chemical-gene-disease associations: arsenic as a case study.' ,'Society of Toxicology Annual Meeting. Seattle, WA, USA. Mar 2008.' ,'Mattingly CJ, Davis AP, Rosenstein MC, Wiegers T, Forrest JN, Boyer JL.' ,'2008-03-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): Promoting understanding of chemical-gene-disease associations.' ,'NERC International Collaboration Initiative: Bioinformatics Workshop. Birmingham, UK. Mar 2008.' ,'Mattingly CJ.' ,'2008-03-01' ,'p' ,NULL ,NULL ) ,('Curating the Comparative Toxicogenomics Database: a knowledge and discovery environment for chemical-gene-disease associations.' ,'Second International Biocuration Meeting. San Jose, CA, USA. Oct 2007.' ,'Davis AP, Murphy C, Rosenstein MC, Wiegers T, Forrest JN, Boyer JL, Mattingly CJ.' ,'2007-10-01' ,'p' ,'/documents/davisetal_biocur2007.ppt' ,'/documents/davisetal_biocur2007_abstract.pdf' ) ,('The Comparative Toxicogenomics Database: Promoting Understanding About the Mechanisms of Chemical Actions. Toxicology Division of the American Society for Pharmacology and Experimental Therapeutics (ASPET).' ,'"Toxicogenomics Approaches for Evaluating Drug and Chemical Toxicity" Symposium at the Experimental Biology Annual Meeting. Washington, DC, USA. Apr 2007.' ,'Mattingly CJ.' ,'2007-04-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database: connecting chemicals, genes, and diseases.' ,'Society of Toxicology Annual Meeting. Charlotte, NC, USA. Mar 2007.' ,'Davis AP, Mattingly CJ, Rosenstein MC, Wiegers T, Forrest JN, Boyer JL.' ,'2007-03-01' ,'p' ,'/documents/davisetal_sot2007_poster.pdf' ,'/documents/davisetal_sot2007_abstract.pdf' ) ,('The Comparative Toxicogenomics Database: A Public Resource for Chemical-Gene and Chemical-Protein Interactions.' ,'EPA Science Forum 2006, U.S Environmental Protection Agency, Washington, DC, USA. May 2006.' ,'Davis AP, Mattingly CJ, Rosenstein MC, Forrest JN, Boyer JL.' ,'2006-05-01' ,'p' ,NULL ,NULL ) ,('Comparative Toxicogenomics Database (CTD): Promoting Understanding of Chemical-Gene Interactions.' ,'Keystone: the Molecular and Integrative Basis for Toxic Responses. Victoria, BC. May 2006.' ,'Mattingly CJ, Rosenstein MC, Davis AP, Colby GC, Forrest JN, Boyer JL.' ,'2006-05-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD).' ,'Society of Toxicology Annual Meeting. San Diego, CA, USA. Mar 2006.' ,'Mattingly CJ, Rosenstein MC, Davis AP, Forrest JN, Boyer JL.' ,'2006-03-01' ,'p' ,NULL ,NULL ) ,('Data Integration in the Comparative Toxicogenomics Database (CTD).' ,'Annual meeting of the International Society for Computational Biology. Detroit, MI, USA. Jun 2005.' ,'Colby GT, Mattingly CJ, Rosenstein, MC, Forrest JN, Boyer JL.' ,'2005-06-01' ,'p' ,NULL ,NULL ) ,('Cross-Species Comparative Approaches to Understanding Chemical-Gene Interactions.' ,'15th International Conference of Comparative Endocrinology. Boston, MA, USA. May 2005.' ,'Mattingly CJ.' ,'2005-05-01' ,'p' ,NULL ,NULL ) ,('Comparative Approaches to Understanding Gene-Chemical Interactions.' ,'Northland Chapter of the Society of Toxicology Meeting. Minneapolis, MN, USA. Apr 2005.' ,'Mattingly CJ.' ,'2005-04-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD).' ,'Society of Toxicology Annual Meeting. New Orleans, LA, USA. Mar 2005.' ,'Mattingly CJ, Colby GT, Rosenstein MC, Forrest JN, Boyer JL.' ,'2005-03-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD): Comparative Molecular Approaches to Environmental Health Research.' ,'American Chemical Society National Meeting. Philadelphia, PA, USA. Aug 2004.' ,'Mattingly CJ.' ,'2004-08-01' ,'p' ,NULL ,NULL ) ,('Comparative Approaches to Understanding Mechanisms of Toxicity: CTD.' ,'2004 World Congress on In Vitro Biology. San Francisco, CA, USA. May 2004.' ,'Mattingly CJ.' ,'2004-05-01' ,'p' ,NULL ,NULL ) ,('The Comparative Toxicogenomics Database (CTD).' ,'Society of Toxicology Annual Meeting. Salt Lake City, UT, USA. Mar 2004.' ,'Mattingly CJ, Colby GT, Rosenstein MC, Forrest JN, Boyer JL.' ,'2004-03-01' ,'p' ,NULL ,NULL ) ; -- COMMIT; VACUUM FULL ANALYZE ctd_reference;
Date: 2026-01-23 10:13:31 Database: ctdprd51 Application: pgAdmin 4 - CONN:3534674 User: pubc Remote:
13 1 FATAL: ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (...) FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (...) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Times Reported Most Frequent Error / Event #13
Day Hour Count Jan 19 23 1 - FATAL: ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort d.nm diseaseNm ,d.acc_txt diseaseAcc ,d.acc_db_cd diseaseAccDbCd ,d.id diseaseId ,g.nm geneSymbol ,g.acc_txt geneAcc ,g.acc_db_cd geneAccDbCd ,g.id geneId ,gd.network_score networkScore ,gd.indirect_chem_qty inferredCount ,gd.reference_qty referenceCount ,gd.exposure_reference_qty exposureReferenceCount ,CASE WHEN gd.curated_reference_qty > 0 THEN (SELECT STRING_AGG(a.action_type_cd || '^' || a.action_type_nm, '|') FROM gene_disease_axn a WHERE a.gene_id = gd.gene_id AND a.disease_id = gd.disease_id) ELSE NULL END actionTypes FROM gene_disease gd INNER JOIN term g ON gd.gene_id = g.id INNER JOIN term d ON gd.disease_id = d.id WHERE gd.disease_id IN (SELECT p.descendant_object_id FROM dag_path p WHERE p.ancestor_object_id = ) ORDER BY actionTypes ,gd.network_score DESC NULLS LAST ,g.nm_sort ,d.nm_sort
Statement: SELECT /* DiseaseGeneAssnsDAO */
Date: 2026-01-19 23:31:19